ACTN2
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Summary
ACTN2 (actinin alpha 2, HGNC:164) is a protein-coding gene on chromosome 1q43, encoding Alpha-actinin-2 (P35609). F-actin cross-linking protein which is thought to anchor actin to a variety of intracellular structures.
Alpha actinins belong to the spectrin gene superfamily which represents a diverse group of cytoskeletal proteins, including the alpha and beta spectrins and dystrophins. Alpha actinin is an actin-binding protein with multiple roles in different cell types. In nonmuscle cells, the cytoskeletal isoform is found along microfilament bundles and adherens-type junctions, where it is involved in binding actin to the membrane. In contrast, skeletal, cardiac, and smooth muscle isoforms are localized to the Z-disc and analogous dense bodies, where they help anchor the myofibrillar actin filaments. This gene encodes a muscle-specific, alpha actinin isoform that is expressed in both skeletal and cardiac muscles. Several transcript variants encoding different isoforms have been found for this gene.
Source: NCBI Gene 88 — RefSeq curated summary.
At a glance
- Gene–disease (curated): ACTN2-related cardiac and skeletal myopathy (Definitive, ClinGen) — +6 more curated relationships
- GWAS associations: 2
- Clinical variants (ClinVar): 1,875 total — 18 pathogenic, 19 likely-pathogenic
- Phenotypes (HPO): 54
- MANE Select transcript:
NM_001103
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:164 |
| Approved symbol | ACTN2 |
| Name | actinin alpha 2 |
| Location | 1q43 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000077522 |
| Ensembl biotype | protein_coding |
| OMIM | 102573 |
| Entrez | 88 |
Gene structure
Transcript identifiers
Ensembl transcripts: 56 — 37 protein_coding, 13 retained_intron, 4 nonsense_mediated_decay, 2 protein_coding_CDS_not_defined
ENST00000366578, ENST00000461367, ENST00000492101, ENST00000492634, ENST00000494762, ENST00000542672, ENST00000651091, ENST00000651187, ENST00000651275, ENST00000651781, ENST00000651786, ENST00000652096, ENST00000682015, ENST00000682490, ENST00000682692, ENST00000682966, ENST00000683075, ENST00000683111, ENST00000683322, ENST00000683805, ENST00000684050, ENST00000684122, ENST00000684286, ENST00000684502, ENST00000684763, ENST00000879531, ENST00000879532, ENST00000879533, ENST00000879534, ENST00000879535, ENST00000879536, ENST00000879537, ENST00000879538, ENST00000967348, ENST00000967349, ENST00000967350, ENST00000967351, ENST00000967352, ENST00000967353, ENST00000967354, ENST00000967355, ENST00000967356, ENST00000967357, ENST00000967358, ENST00000967359, ENST00000967360, ENST00000967361, ENST00000967362, ENST00000967363, ENST00000967364, ENST00000967365, ENST00000967366, ENST00000967367, ENST00000967368, ENST00000967369, ENST00000967370
RefSeq mRNA: 2 — MANE Select: NM_001103
NM_001103, NM_001278343
CCDS: CCDS1613, CCDS60455
Canonical transcript exons
ENST00000366578 — 21 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000908080 | 236751470 | 236751652 |
| ENSE00000908082 | 236753947 | 236754081 |
| ENSE00001442092 | 236762461 | 236764631 |
| ENSE00001820573 | 236686499 | 236686799 |
| ENSE00003486984 | 236755019 | 236755198 |
| ENSE00003506339 | 236759724 | 236759789 |
| ENSE00003528697 | 236739302 | 236739532 |
| ENSE00003535150 | 236761015 | 236761173 |
| ENSE00003535405 | 236720105 | 236720191 |
| ENSE00003539831 | 236735635 | 236735720 |
| ENSE00003548721 | 236757486 | 236757632 |
| ENSE00003553097 | 236725933 | 236726020 |
| ENSE00003611529 | 236717858 | 236717972 |
| ENSE00003612377 | 236718894 | 236719013 |
| ENSE00003624483 | 236731233 | 236731314 |
| ENSE00003633662 | 236727678 | 236727756 |
| ENSE00003643789 | 236742896 | 236743043 |
| ENSE00003672038 | 236737122 | 236737214 |
| ENSE00003722922 | 236749124 | 236749264 |
| ENSE00003722977 | 236747667 | 236747775 |
| ENSE00003739119 | 236744626 | 236744776 |
Expression profiles
Bgee: expression breadth ubiquitous, 226 present calls, max score 99.85.
FANTOM5 (CAGE): breadth broad, TPM avg 37.5968 / max 5363.2815, expressed in 593 samples.
FANTOM5 promoters (8 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 9247 | 36.4489 | 568 |
| 9262 | 0.5498 | 79 |
| 9246 | 0.2390 | 82 |
| 9251 | 0.2001 | 56 |
| 202017 | 0.0725 | 21 |
| 9261 | 0.0515 | 27 |
| 9264 | 0.0212 | 9 |
| 9263 | 0.0137 | 5 |
Top tissues by expression
290 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 99.85 | gold quality |
| skeletal muscle tissue of biceps brachii | UBERON:0004502 | 99.83 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 99.82 | gold quality |
| biceps brachii | UBERON:0001507 | 99.80 | gold quality |
| gluteal muscle | UBERON:0002000 | 99.80 | gold quality |
| apex of heart | UBERON:0002098 | 99.80 | gold quality |
| gastrocnemius | UBERON:0001388 | 99.77 | gold quality |
| heart right ventricle | UBERON:0002080 | 99.77 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 99.76 | gold quality |
| triceps brachii | UBERON:0001509 | 99.75 | gold quality |
| left ventricle myocardium | UBERON:0006566 | 99.75 | gold quality |
| deltoid | UBERON:0001476 | 99.74 | gold quality |
| body of tongue | UBERON:0011876 | 99.70 | gold quality |
| diaphragm | UBERON:0001103 | 99.69 | gold quality |
| tibialis anterior | UBERON:0001385 | 99.67 | gold quality |
| myocardium | UBERON:0002349 | 99.66 | gold quality |
| vastus lateralis | UBERON:0001379 | 99.65 | gold quality |
| cardiac ventricle | UBERON:0002082 | 99.64 | gold quality |
| heart left ventricle | UBERON:0002084 | 99.64 | gold quality |
| quadriceps femoris | UBERON:0001377 | 99.63 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 99.60 | gold quality |
| cardiac atrium | UBERON:0002081 | 99.58 | gold quality |
| right atrium auricular region | UBERON:0006631 | 99.57 | gold quality |
| muscle organ | UBERON:0001630 | 98.54 | gold quality |
| heart | UBERON:0000948 | 98.36 | gold quality |
| muscle of leg | UBERON:0001383 | 98.09 | gold quality |
| vena cava | UBERON:0004087 | 97.57 | gold quality |
| muscle tissue | UBERON:0002385 | 97.44 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 96.51 | gold quality |
| nucleus accumbens | UBERON:0001882 | 95.15 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-11268 | no | 1505.71 |
| E-CURD-10 | no | 219.72 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
83 targeting ACTN2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-7110-3P | 100.00 | 73.18 | 2486 |
| HSA-MIR-3646 | 100.00 | 73.56 | 5283 |
| HSA-MIR-29A-3P | 100.00 | 73.11 | 1835 |
| HSA-MIR-29B-3P | 100.00 | 73.18 | 1833 |
| HSA-MIR-29C-3P | 100.00 | 73.15 | 1833 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-6873-3P | 100.00 | 71.42 | 2626 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-4795-3P | 100.00 | 74.62 | 4024 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-5696 | 99.98 | 72.36 | 4487 |
| HSA-MIR-8068 | 99.98 | 73.85 | 2376 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-548AJ-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-548X-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-4267 | 99.96 | 66.53 | 2368 |
| HSA-MIR-548J-3P | 99.94 | 72.61 | 4881 |
| HSA-MIR-4760-3P | 99.93 | 70.50 | 2385 |
| HSA-MIR-548AE-3P | 99.93 | 72.66 | 4867 |
| HSA-MIR-548AH-3P | 99.93 | 72.54 | 4872 |
| HSA-MIR-548AM-3P | 99.93 | 72.54 | 4872 |
| HSA-MIR-548AQ-3P | 99.93 | 72.66 | 4867 |
| HSA-MIR-3119 | 99.92 | 71.34 | 2390 |
| HSA-MIR-3671 | 99.90 | 73.04 | 3897 |
| HSA-MIR-627-3P | 99.90 | 71.42 | 3316 |
| HSA-MIR-5682 | 99.89 | 72.56 | 1005 |
| HSA-MIR-95-5P | 99.89 | 72.17 | 3973 |
| HSA-MIR-153-5P | 99.89 | 73.86 | 6317 |
| HSA-MIR-137-3P | 99.87 | 74.74 | 2401 |
Literature-anchored findings (GeneRIF, showing 33)
- Spectrin-like repeats from dystrophin and alpha-actinin-2 are not functionally interchangeable. (PMID:12140183)
- Association of Ca2+-activated K+ channel with alpha-actinin2 localizes channel to entry of external Ca(2+) source, which regulates channel function. (PMID:17110593)
- actinin-2 participate in sequestering parafibromin in the cytoplasmic compartment. (PMID:18687124)
- ACTN2 expression is affected by the content of alpha-actinin-3. (PMID:19150855)
- demonstrate that proper membrane localization of a small-conductance Ca(2+)-activated K(+) channel (SK2 or K(Ca)2.2) is dependent on its interacting protein, alpha-actinin2, a major F-actin crosslinking protein. (PMID:19815520)
- BPAG1-b was detectable in vitro and in vivo as a high molecular mass protein in striated and heart muscle cells, co-localizing with alpha-actinin-2 and partially with the cytolinker plectin as well as with the intermediate filament protein desmin. (PMID:19932097)
- This is the first genome-wide linkage analysis that shows mutations in ACTN2 cause HCM (PMID:20022194)
- This study generated the genomic sequences of K88-positive and F18-positive porcine enteroteoxigenic E. coli (ETEC) strains and examined the phylogenetic distribution of clinical porcine ETEC strains and their plasmid-associated genetic content. (PMID:22081385)
- data provide functional evidence that the primary sequences of alpha-actinin-2 and alpha-actinin-3 evolved differences to optimize their functions (PMID:22253474)
- Findigs show that the F-actin-binding protein alpha-actinin-2 targets CaMKIIalpha to F-actin in cells by binding to the CaMKII regulatory domain. (PMID:22427672)
- study strengthens the hypothesis that ACTN2 influences caries risk. (PMID:24810274)
- The novel heterozygous missense sequence variant ACTN2 cosegregated with a complex cardiomyopathic trait, characterized by the interplay of midapical, nonobstructive HCM, early onset of AF and AV block, as well as regional LV noncompaction. (PMID:25173926)
- Clinical evaluation of an Australian family revealed diverse cardiac pathologies in four affected members and genetic testing of the exome identified a pathogenic ACTN2 heterozygous variant (Ala119Thr) that co-segregated with disease. (PMID:25224718)
- Study reports a complete high-resolution structure of the 200 kDa alpha-actinin-2 dimer from striated muscle and explore its functional implications on the biochemical and cellular level. (PMID:25433700)
- the interaction between GNE and alpha-actinin 1 and alpha-actinin 2 occur at different sites in the alpha-actinin molecules and that for alpha-actinin 2 the interaction site is located at the C-terminus of the protein. (PMID:27023225)
- The full length mEos2 tagged protein expressed in adult cardiomyocytes shows that both mutations additionally affect Z-disc localization and dynamic behaviour (PMID:27287556)
- These results provide new insights into the regulation of SK2 channel trafficking by the cytoskeletal proteins FLNA and alpha-actinin2, involving distinct recycling pathways (PMID:27779751)
- A dual-beam optical tweezers measured the mechanics of alpha-actinin 2 and rabbit titin interaction at the single-molecule level. Depending on the direction of force application, the unbinding forces can more than triple. Multiple alpha-actinin/Z-repeat interactions cooperate to ensure long-term stable titin anchoring, while allowing the individual components to exchange dynamically. (PMID:28096424)
- A novel, likely pathogenic mutation (c.959T>G/p.L320R) of ACTN2 was identified in all individuals affected with dilated cardiomyopathy (DCM) and/or ventricular tachycardia. This study not only expands the spectrum of ACTN2 mutations and contributes to the genetic diagnosis and counseling of families with DCM and arrhythmia, but also provides a new case with overlap phenotype caused by an ACTN2 variant. (PMID:30630173)
- our data demonstrate that specific mutations in the well-known Z-line regulator alpha-actinin-2 can cause a skeletal muscle disorder (PMID:30701273)
- A unique missense mutation in ACTN2 was identified that is linked to a new genetically determined distal myopathy. (PMID:30900782)
- Cardiac MLC2 kinase is localized to the Z-disc and interacts with alpha-actinin2. (PMID:31467300)
- CTN2 (rs6655267) and MPPED2 (rs536007) are not associated with primary dentition caries. MPPED2 (rs11031093, G Allele) is marginally associated. (PMID:32040219)
- A putative causal variant associated with heart failure, in a cardiac muscle specific regulatory region activated during cardiomyocyte differentiation, binds to actinin alpha 2 (ACTN2) gene enhancer. Genome-editing in human embryonic stem cell-derived cardiomyocytes confirms the influence of the identified regulatory region in the expression of ACTN2. (PMID:32111823)
- Differential regulation of Actn2 and Actn3 expression during unfolded protein response in C2C12 myotubes. (PMID:32451822)
- Sleeping Beauty insertional mutagenesis screen identifies the pro-metastatic roles of CNPY2 and ACTN2 in hepatocellular carcinoma tumor progression. (PMID:33482578)
- Mono- and Biallelic Protein-Truncating Variants in Alpha-Actinin 2 Cause Cardiomyopathy Through Distinct Mechanisms. (PMID:34802252)
- ACTN2 Mutant Causes Proteopathy in Human iPSC-Derived Cardiomyocytes. (PMID:36078153)
- Mutation update for the ACTN2 gene. (PMID:36116040)
- Cardiomyopathy-associated variants alter the structure and function of the alpha-actinin-2 actin-binding domain. (PMID:37271035)
- Disruption of Z-Disc Function Promotes Mechanical Dysfunction in Human Myocardium: Evidence for a Dual Myofilament Modulatory Role by Alpha-Actinin 2. (PMID:37834023)
- Recurring homozygous ACTN2 variant (p.Arg506Gly) causes a recessive myopathy. (PMID:38311799)
- Actn2 defects accelerates H9c2 hypertrophy via ERK phosphorylation under chronic stress. (PMID:38990270)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | actn2b | ENSDARG00000071090 |
| mus_musculus | Actn2 | ENSMUSG00000052374 |
| rattus_norvegicus | Actn2 | ENSRNOG00000017833 |
| caenorhabditis_elegans | WBGENE00000228 |
Paralogs (36): SYNE2 (ENSG00000054654), SPTB (ENSG00000070182), ACTN1 (ENSG00000072110), DSP (ENSG00000096696), DRP2 (ENSG00000102385), SPTBN1 (ENSG00000115306), MACF1 (ENSG00000127603), FLNC (ENSG00000128591), ACTN4 (ENSG00000130402), SYNE1 (ENSG00000131018), MICAL2 (ENSG00000133816), DTNA (ENSG00000134769), MICAL1 (ENSG00000135596), FLNB (ENSG00000136068), SPTBN5 (ENSG00000137877), DTNB (ENSG00000138101), GAS2L3 (ENSG00000139354), DST (ENSG00000151914), UTRN (ENSG00000152818), SPTBN4 (ENSG00000160460), SPTA1 (ENSG00000163554), CLMN (ENSG00000165959), PKHD1 (ENSG00000170927), SPTBN2 (ENSG00000173898), SYNE3 (ENSG00000176438), PLEC (ENSG00000178209), SMTNL2 (ENSG00000188176), FLNA (ENSG00000196924), SPTAN1 (ENSG00000197694), DMD (ENSG00000198947), PKHD1L1 (ENSG00000205038), DYTN (ENSG00000232125), MICAL3 (ENSG00000243156), ACTN3 (ENSG00000248746), EPPK1 (ENSG00000261150), GAS2L2 (ENSG00000270765)
Protein
Protein identifiers
Alpha-actinin-2 — P35609 (reviewed: P35609)
Alternative names: Alpha-actinin skeletal muscle isoform 2, F-actin cross-linking protein
All UniProt accessions (9): P35609, A0A494C031, A0A494C033, A0A494C060, A0A494C0Q3, A0A494C166, A0A494C1A0, A0A804HI95, A0A804HKG0
UniProt curated annotations — full annotation on UniProt →
Function. F-actin cross-linking protein which is thought to anchor actin to a variety of intracellular structures. This is a bundling protein.
Subunit / interactions. Homodimer; antiparallel. Also forms heterodimers with ACTN3. Interacts with ADAM12, MYOZ1, MYOZ2 and MYOZ3. Interacts via its C-terminal region with the LDB3 PDZ domain. Interacts with XIRP2. Interacts with DST isoform 1 (via N-terminus). Interacts with PARVB. Interacts with SYNPO2.
Subcellular location. Cytoplasm. Myofibril. Sarcomere. Z line.
Tissue specificity. Expressed in both skeletal and cardiac muscle.
Post-translational modifications. Ubiquitinated by FBXL22, leading to proteasomal degradation.
Disease relevance. Cardiomyopathy, familial hypertrophic, 23, with or without left ventricular non-compaction (CMH23) [MIM:612158] A hereditary heart disorder characterized by ventricular hypertrophy, which is usually asymmetric and often involves the interventricular septum. The symptoms include dyspnea, syncope, collapse, palpitations, and chest pain. They can be readily provoked by exercise. The disorder has inter- and intrafamilial variability ranging from benign to malignant forms with high risk of cardiac failure and sudden cardiac death. The disease is caused by variants affecting the gene represented in this entry. Cardiomyopathy, dilated, 1AA, with or without left ventricular non-compaction (CMD1AA) [MIM:612158] A disorder characterized by ventricular dilation and impaired systolic function, resulting in congestive heart failure and arrhythmia. Patients are at risk of premature death. The disease is caused by variants affecting the gene represented in this entry. Congenital myopathy 8 (CMYO8) [MIM:618654] An autosomal dominant muscular disorder characterized by progressive early-onset muscle weakness, gait difficulties, loss of ambulation, and respiratory insufficiency. Morphological and ultrastructural analyses of muscle biopsies reveal type 1 fiber predominance, multiple structured cores forming a circular arrangement beneath the sarcolemma, and jagged Z-lines. The disease is caused by variants affecting the gene represented in this entry. Myopathy, distal, 6, adult onset, autosomal dominant (MPD6) [MIM:618655] An autosomal dominant muscular disorder characterized by adult onset of asymmetric distal muscle weakness, primarily affecting the lower limbs and resulting in gait difficulties. Some patients develop involvement of proximal and upper limb muscles. The disease is caused by variants affecting the gene represented in this entry. Defects in ACTN2 may be the cause of an autosomal recessive myopathy characterized by asymmetric, progressive muscle weakness predominantly affecting the lower extremities. Patients do not manifest cardiomyopathy or respiratory insufficiency. Muscle biopsy reveals disruption of the inter-myofibrillar architecture, type I fiber predominance and atrophy.
Similarity. Belongs to the alpha-actinin family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P35609-1 | 1 | yes |
| P35609-2 | 2 |
RefSeq proteins (2): NP_001094, NP_001265272 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001589 | Actinin_actin-bd_CS | Conserved_site |
| IPR001715 | CH_dom | Domain |
| IPR002017 | Spectrin_repeat | Repeat |
| IPR002048 | EF_hand_dom | Domain |
| IPR011992 | EF-hand-dom_pair | Homologous_superfamily |
| IPR014837 | EF-hand_Ca_insen | Domain |
| IPR018159 | Spectrin/alpha-actinin | Repeat |
| IPR036872 | CH_dom_sf | Homologous_superfamily |
Pfam: PF00307, PF00435, PF08726, PF13499
UniProt features (83 total): helix 38, sequence variant 12, turn 8, strand 7, binding site 6, domain 4, repeat 4, chain 1, modified residue 1, splice variant 1, region of interest 1
Structure
Experimental structures (PDB)
16 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 6SWT | X-RAY DIFFRACTION | 1.2 |
| 6TS3 | X-RAY DIFFRACTION | 1.28 |
| 7B56 | X-RAY DIFFRACTION | 1.45 |
| 7B55 | X-RAY DIFFRACTION | 1.6 |
| 5A37 | X-RAY DIFFRACTION | 1.88 |
| 5A38 | X-RAY DIFFRACTION | 1.9 |
| 7B57 | X-RAY DIFFRACTION | 1.95 |
| 5A36 | X-RAY DIFFRACTION | 2 |
| 5A4B | X-RAY DIFFRACTION | 2.01 |
| 1QUU | X-RAY DIFFRACTION | 2.5 |
| 7A8T | X-RAY DIFFRACTION | 2.69 |
| 1HCI | X-RAY DIFFRACTION | 2.8 |
| 7ANK | X-RAY DIFFRACTION | 3.2 |
| 4D1E | X-RAY DIFFRACTION | 3.5 |
| 7A8U | X-RAY DIFFRACTION | 3.8 |
| 1H8B | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P35609-F1 | 84.88 | 0.47 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (6): 766; 770; 777; 802; 804; 808
Post-translational modifications (1): 237
Function
Pathways and Gene Ontology
Reactome pathways
23 pathways
| ID | Pathway |
|---|---|
| R-HSA-114608 | Platelet degranulation |
| R-HSA-373753 | Nephrin family interactions |
| R-HSA-390522 | Striated Muscle Contraction |
| R-HSA-438066 | Unblocking of NMDA receptors, glutamate binding and activation |
| R-HSA-442982 | Ras activation upon Ca2+ influx through NMDA receptor |
| R-HSA-5673001 | RAF/MAP kinase cascade |
| R-HSA-9609736 | Assembly and cell surface presentation of NMDA receptors |
| R-HSA-9617324 | Negative regulation of NMDA receptor-mediated neuronal transmission |
| R-HSA-9620244 | Long-term potentiation |
| R-HSA-109582 | Hemostasis |
| R-HSA-112314 | Neurotransmitter receptors and postsynaptic signal transmission |
| R-HSA-112315 | Transmission across Chemical Synapses |
| R-HSA-112316 | Neuronal System |
| R-HSA-1500931 | Cell-Cell communication |
| R-HSA-162582 | Signal Transduction |
| R-HSA-397014 | Muscle contraction |
| R-HSA-438064 | Post NMDA receptor activation events |
| R-HSA-442742 | CREB1 phosphorylation through NMDA receptor-mediated activation of RAS signaling |
| R-HSA-442755 | Activation of NMDA receptors and postsynaptic events |
| R-HSA-5683057 | MAPK family signaling cascades |
| R-HSA-5684996 | MAPK1/MAPK3 signaling |
| R-HSA-76002 | Platelet activation, signaling and aggregation |
| R-HSA-76005 | Response to elevated platelet cytosolic Ca2+ |
MSigDB gene sets: 445 (showing top):
BROWNE_HCMV_INFECTION_30MIN_DN, GOBP_POTASSIUM_ION_TRANSPORT, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, GOBP_MUSCLE_TISSUE_DEVELOPMENT, GOCC_SECRETORY_GRANULE, REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION, GOBP_FOCAL_ADHESION_ASSEMBLY, GOBP_RESPONSE_TO_ANGIOTENSIN, GOBP_STRIATED_MUSCLE_CELL_DIFFERENTIATION, KEGG_TIGHT_JUNCTION, GOBP_VESICLE_MEDIATED_TRANSPORT, GOBP_POSITIVE_REGULATION_OF_PROTEIN_CONTAINING_COMPLEX_DISASSEMBLY, GOBP_POSITIVE_REGULATION_OF_ORGANELLE_ORGANIZATION, GOBP_SARCOMERE_ORGANIZATION, GOBP_POSITIVE_REGULATION_OF_POTASSIUM_ION_TRANSPORT
GO Biological Process (20): cell adhesion (GO:0007155), microspike assembly (GO:0030035), actin cytoskeleton organization (GO:0030036), regulation of membrane potential (GO:0042391), regulation of apoptotic process (GO:0042981), negative regulation of potassium ion transport (GO:0043267), positive regulation of potassium ion transport (GO:0043268), sarcomere organization (GO:0045214), focal adhesion assembly (GO:0048041), actin filament uncapping (GO:0051695), muscle cell development (GO:0055001), cardiac muscle cell development (GO:0055013), protein localization to plasma membrane (GO:0072659), phospholipase C-activating angiotensin-activated signaling pathway (GO:0086097), negative regulation of protein localization to cell surface (GO:2000009), positive regulation of endocytic recycling (GO:2001137), positive regulation of DNA-templated transcription (GO:0045893), anatomical structure formation involved in morphogenesis (GO:0048646), postsynaptic actin cytoskeleton organization (GO:0098974), positive regulation of cation channel activity (GO:2001259)
GO Molecular Function (20): transcription coactivator activity (GO:0003713), integrin binding (GO:0005178), calcium ion binding (GO:0005509), phosphatidylinositol-4,5-bisphosphate binding (GO:0005546), cytoskeletal protein binding (GO:0008092), structural constituent of muscle (GO:0008307), protein domain specific binding (GO:0019904), LIM domain binding (GO:0030274), titin binding (GO:0031432), identical protein binding (GO:0042802), transmembrane transporter binding (GO:0044325), actin filament binding (GO:0051015), FATZ binding (GO:0051373), titin Z domain binding (GO:0070080), structural constituent of postsynaptic actin cytoskeleton (GO:0098973), channel activator activity (GO:0099103), actin binding (GO:0003779), protein binding (GO:0005515), protein-containing complex binding (GO:0044877), metal ion binding (GO:0046872)
GO Cellular Component (24): extracellular region (GO:0005576), cytosol (GO:0005829), cytoskeleton (GO:0005856), actin filament (GO:0005884), focal adhesion (GO:0005925), Z disc (GO:0030018), cell junction (GO:0030054), filopodium (GO:0030175), cortical actin cytoskeleton (GO:0030864), platelet alpha granule lumen (GO:0031093), pseudopodium (GO:0031143), cell projection (GO:0042995), dendritic spine (GO:0043197), extracellular exosome (GO:0070062), postsynaptic density membrane (GO:0098839), postsynaptic actin cytoskeleton (GO:0098871), glutamatergic synapse (GO:0098978), postsynaptic density, intracellular component (GO:0099092), cytoplasm (GO:0005737), plasma membrane (GO:0005886), actin cytoskeleton (GO:0015629), sarcomere (GO:0030017), synapse (GO:0045202), plasma membrane bounded cell projection (GO:0120025)
Reactome top-level categories
Rollup of top-11 pathways:
| Category | Pathways |
|---|---|
| Activation of NMDA receptors and postsynaptic events | 4 |
| Post NMDA receptor activation events | 2 |
| Response to elevated platelet cytosolic Ca2+ | 1 |
| Cell-Cell communication | 1 |
| Muscle contraction | 1 |
| CREB1 phosphorylation through NMDA receptor-mediated activation of RAS signaling | 1 |
| MAPK1/MAPK3 signaling | 1 |
| Transmission across Chemical Synapses | 1 |
| Neuronal System | 1 |
| Neurotransmitter receptors and postsynaptic signal transmission | 1 |
| Signal Transduction | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 6 |
| protein binding | 4 |
| cytoskeletal protein binding | 3 |
| actin cytoskeleton | 3 |
| potassium ion transport | 2 |
| regulation of potassium ion transport | 2 |
| protein-containing complex binding | 2 |
| protein domain specific binding | 2 |
| binding | 2 |
| postsynapse | 2 |
| postsynaptic density | 2 |
| cellular process | 1 |
| plasma membrane bounded cell projection assembly | 1 |
| cytoskeleton organization | 1 |
| actin filament-based process | 1 |
| monoatomic ion transmembrane transport | 1 |
| regulation of biological quality | 1 |
| apoptotic process | 1 |
| regulation of programmed cell death | 1 |
| negative regulation of monoatomic ion transport | 1 |
| positive regulation of monoatomic ion transport | 1 |
| myofibril assembly | 1 |
| actomyosin structure organization | 1 |
| cell-substrate junction assembly | 1 |
| cell-matrix adhesion | 1 |
| positive regulation of actin filament depolymerization | 1 |
| muscle cell differentiation | 1 |
| cell development | 1 |
| striated muscle cell development | 1 |
| cardiac cell development | 1 |
| cardiac muscle cell differentiation | 1 |
| protein localization to membrane | 1 |
| protein localization to cell periphery | 1 |
| phospholipase C-activating G protein-coupled receptor signaling pathway | 1 |
| angiotensin-activated signaling pathway | 1 |
| protein localization to cell surface | 1 |
| negative regulation of protein localization | 1 |
| regulation of protein localization to cell surface | 1 |
| positive regulation of intracellular transport | 1 |
| endocytic recycling | 1 |
Protein interactions and networks
STRING
2138 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ACTN2 | TTN | Q8WZ42 | 992 |
| ACTN2 | MYOZ2 | Q9NPC6 | 962 |
| ACTN2 | MYOZ1 | Q9NP98 | 961 |
| ACTN2 | LDB3 | O75112 | 947 |
| ACTN2 | PDLIM3 | Q53GG5 | 922 |
| ACTN2 | MYOT | Q9UBF9 | 910 |
| ACTN2 | MYPN | Q86TC9 | 902 |
| ACTN2 | TCAP | O15273 | 899 |
| ACTN2 | CSRP3 | P50461 | 874 |
| ACTN2 | TNNT2 | P45379 | 866 |
| ACTN2 | GRIN2B | Q13224 | 865 |
| ACTN2 | VCL | P18206 | 833 |
| ACTN2 | MYH7 | P12883 | 831 |
| ACTN2 | ACTA1 | P02568 | 818 |
| ACTN2 | MYH6 | P13533 | 812 |
IntAct
435 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| ACTN2 | ACTN2 | psi-mi:“MI:0915”(physical association) | 0.870 |
| PDLIM1 | ACTN4 | psi-mi:“MI:0914”(association) | 0.800 |
| SNAI1 | ACTN2 | psi-mi:“MI:0915”(physical association) | 0.780 |
| SAXO1 | ACTN2 | psi-mi:“MI:0915”(physical association) | 0.780 |
| ACTN2 | MYOZ2 | psi-mi:“MI:0915”(physical association) | 0.780 |
| RTP5 | ACTN2 | psi-mi:“MI:0915”(physical association) | 0.780 |
| BRMS1L | ACTN2 | psi-mi:“MI:0915”(physical association) | 0.780 |
| ACTN2 | MICALL2 | psi-mi:“MI:0915”(physical association) | 0.780 |
| ACTN2 | SNAI1 | psi-mi:“MI:0915”(physical association) | 0.780 |
| ACTN2 | SAXO1 | psi-mi:“MI:0915”(physical association) | 0.780 |
| MYOZ2 | ACTN2 | psi-mi:“MI:0915”(physical association) | 0.780 |
| ACTN2 | RTP5 | psi-mi:“MI:0915”(physical association) | 0.780 |
| ACTN2 | BRMS1L | psi-mi:“MI:0915”(physical association) | 0.780 |
| MICALL2 | ACTN2 | psi-mi:“MI:0915”(physical association) | 0.780 |
BioGRID (208): ACTN2 (Two-hybrid), MOS (Two-hybrid), SNAI1 (Two-hybrid), SP100 (Two-hybrid), PDLIM3 (Two-hybrid), MYOZ2 (Two-hybrid), MICALL2 (Two-hybrid), BRMS1L (Two-hybrid), FAM154A (Two-hybrid), RTP5 (Two-hybrid), ACTN2 (Two-hybrid), ACTN2 (Affinity Capture-MS), ACTN2 (Two-hybrid), ACTN2 (Co-fractionation), ACTN2 (Co-fractionation)
ESM2 similar proteins: A5D7D1, L7UZ85, O43707, O88990, P05094, P11277, P12814, P15508, P18091, P20111, P26232, P30997, P35609, P46940, P57780, Q00078, Q00963, Q01082, Q08043, Q0E908, Q0III9, Q13576, Q2PFV7, Q3B7N2, Q3UQ44, Q3ZC55, Q4QR29, Q4WVG0, Q5M7J9, Q5R416, Q5RCS6, Q61301, Q62018, Q62261, Q6DEU9, Q6INS3, Q6NXC0, Q6PD62, Q7G188, Q7PKQ5
Diamond homologs: A5D7D1, D3ZEN0, D3ZHA0, D3ZHV2, D3ZQL6, E1BBG2, F1MF74, F1RA39, F6QZ15, G3MWR8, G3V7L1, L7UZ85, M9MRD1, O13728, O15020, O43707, O75369, O76329, O88990, O94851, O97592, P05094, P05095, P07751, P11277, P11530, P11531, P11532, P11533, P12814, P13395, P13466, P15508, P16086, P16546, P18091, P20111, P21333, P30427, P35609
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
1875 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 18 |
| Likely pathogenic | 19 |
| Uncertain significance | 858 |
| Likely benign | 604 |
| Benign | 109 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 147606 | GRCh38/hg38 1q42.3-43(chr1:235387992-237270632)x3 | Pathogenic |
| 148480 | GRCh38/hg38 1q43-44(chr1:236556082-248918469)x1 | Pathogenic |
| 1527626 | GRCh37/hg19 1q42.2-43(chr1:232226609-241010904) | Pathogenic |
| 1711168 | GRCh37/hg19 1q42.2-44(chr1:233012994-249206918)x1 | Pathogenic |
| 1808740 | GRCh37/hg19 1q42.2-43(chr1:232732121-243338216)x1 | Pathogenic |
| 189516 | NM_001103.4(ACTN2):c.2276G>C (p.Arg759Thr) | Pathogenic |
| 189517 | NM_001103.4(ACTN2):c.1883A>G (p.Glu628Gly) | Pathogenic |
| 201635 | NM_001103.4(ACTN2):c.2527-1G>A | Pathogenic |
| 201650 | NM_001103.4(ACTN2):c.2578C>T (p.Gln860Ter) | Pathogenic |
| 253636 | GRCh37/hg19 1q42.2-44(chr1:234050864-249213059)x3 | Pathogenic |
| 2685865 | GRCh37/hg19 1q42.13-43(chr1:230231959-238032346)x1 | Pathogenic |
| 3063443 | GRCh37/hg19 1q42.2-43(chr1:233813555-240578304)x1 | Pathogenic |
| 3247621 | NC_000001.10:g.(?235275379)(236899040_?)del | Pathogenic |
| 393997 | GRCh37/hg19 1q42.2-44(chr1:231670870-249213000)x3 | Pathogenic |
| 4075274 | NM_001103.4(ACTN2):c.210dup (p.Lys71Ter) | Pathogenic |
| 441651 | GRCh37/hg19 1q42.2-43(chr1:234605553-240932205)x1 | Pathogenic |
| 441937 | GRCh37/hg19 1q42.3-44(chr1:235797384-249224684)x1 | Pathogenic |
| 685476 | GRCh37/hg19 1q42.3-44(chr1:235582580-249224684)x3 | Pathogenic |
| 1326967 | NM_001103.4(ACTN2):c.698-2A>G | Likely pathogenic |
| 1333296 | NM_001103.4(ACTN2):c.311T>A (p.Leu104Ter) | Likely pathogenic |
| 1343346 | NM_001103.4(ACTN2):c.1167_1169delinsA (p.Leu390fs) | Likely pathogenic |
| 1678113 | NM_001103.4(ACTN2):c.2301+1G>T | Likely pathogenic |
| 1678144 | NM_001103.4(ACTN2):c.796del (p.Ala266fs) | Likely pathogenic |
| 189519 | NM_001103.4(ACTN2):c.683T>C (p.Met228Thr) | Likely pathogenic |
| 3068664 | NM_001103.4(ACTN2):c.239C>G (p.Ser80Ter) | Likely pathogenic |
| 3254576 | NM_001103.4(ACTN2):c.1378C>T (p.Gln460Ter) | Likely pathogenic |
| 429420 | NM_001103.4(ACTN2):c.352G>T (p.Gly118Cys) | Likely pathogenic |
| 4528932 | NM_001103.4(ACTN2):c.448+1115_615+666del | Likely pathogenic |
| 4530632 | NM_001103.4(ACTN2):c.1840-1G>A | Likely pathogenic |
| 4531403 | NM_001103.4(ACTN2):c.1661del (p.Leu554fs) | Likely pathogenic |
SpliceAI
3390 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:236686796:G:GT | donor_gain | 1.0000 |
| 1:236686797:A:T | donor_gain | 1.0000 |
| 1:236686797:AAGGT:A | donor_loss | 1.0000 |
| 1:236686799:GGT:G | donor_loss | 1.0000 |
| 1:236717853:TGCA:T | acceptor_loss | 1.0000 |
| 1:236717854:GCAG:G | acceptor_loss | 1.0000 |
| 1:236717855:CA:C | acceptor_loss | 1.0000 |
| 1:236717856:A:AG | acceptor_gain | 1.0000 |
| 1:236717857:G:GC | acceptor_gain | 1.0000 |
| 1:236717857:GA:G | acceptor_gain | 1.0000 |
| 1:236717857:GAC:G | acceptor_gain | 1.0000 |
| 1:236717857:GACC:G | acceptor_gain | 1.0000 |
| 1:236717857:GACCT:G | acceptor_gain | 1.0000 |
| 1:236717932:G:GT | donor_gain | 1.0000 |
| 1:236717937:GCCT:G | donor_gain | 1.0000 |
| 1:236717960:G:GT | donor_gain | 1.0000 |
| 1:236717970:CAGG:C | donor_loss | 1.0000 |
| 1:236717972:GG:G | donor_loss | 1.0000 |
| 1:236717974:T:G | donor_loss | 1.0000 |
| 1:236719011:AAG:A | donor_loss | 1.0000 |
| 1:236719012:AG:A | donor_loss | 1.0000 |
| 1:236719013:GGT:G | donor_loss | 1.0000 |
| 1:236719014:G:C | donor_loss | 1.0000 |
| 1:236719015:T:A | donor_loss | 1.0000 |
| 1:236720097:A:AG | acceptor_gain | 1.0000 |
| 1:236720098:C:G | acceptor_gain | 1.0000 |
| 1:236720100:TGCAG:T | acceptor_loss | 1.0000 |
| 1:236720101:GCA:G | acceptor_loss | 1.0000 |
| 1:236720102:CA:C | acceptor_loss | 1.0000 |
| 1:236720103:A:AC | acceptor_loss | 1.0000 |
AlphaMissense
5985 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 1:236686781:G:C | W36C | 1.000 |
| 1:236686781:G:T | W36C | 1.000 |
| 1:236686792:A:C | Q40P | 1.000 |
| 1:236686793:G:C | Q40H | 1.000 |
| 1:236686793:G:T | Q40H | 1.000 |
| 1:236717861:T:C | F44L | 1.000 |
| 1:236717862:T:C | F44S | 1.000 |
| 1:236717862:T:G | F44C | 1.000 |
| 1:236717863:C:A | F44L | 1.000 |
| 1:236717863:C:G | F44L | 1.000 |
| 1:236717870:T:A | W47R | 1.000 |
| 1:236717870:T:C | W47R | 1.000 |
| 1:236717871:G:C | W47S | 1.000 |
| 1:236717872:G:C | W47C | 1.000 |
| 1:236717872:G:T | W47C | 1.000 |
| 1:236717873:T:C | C48R | 1.000 |
| 1:236717874:G:A | C48Y | 1.000 |
| 1:236717875:T:G | C48W | 1.000 |
| 1:236717882:C:G | H51D | 1.000 |
| 1:236717886:T:C | L52P | 1.000 |
| 1:236717936:G:C | G69R | 1.000 |
| 1:236717936:G:T | G69C | 1.000 |
| 1:236717937:G:A | G69D | 1.000 |
| 1:236717937:G:T | G69V | 1.000 |
| 1:236717946:T:A | L72H | 1.000 |
| 1:236717946:T:C | L72P | 1.000 |
| 1:236717955:T:C | L75P | 1.000 |
| 1:236717958:T:C | L76S | 1.000 |
| 1:236717958:T:G | L76W | 1.000 |
| 1:236718921:G:A | G90E | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000009390 (1:236729417 G>A), RS1000026426 (1:236685843 G>A), RS1000101176 (1:236690062 T>C,G), RS1000142016 (1:236702098 G>A), RS1000196078 (1:236694763 T>C), RS1000292193 (1:236761934 G>A), RS1000301617 (1:236687166 C>T), RS1000315178 (1:236733064 C>G), RS1000337105 (1:236733667 C>T), RS1000392646 (1:236738291 G>A), RS1000406168 (1:236704768 A>G), RS1000424015 (1:236738569 C>T), RS1000434332 (1:236698179 T>C), RS1000454799 (1:236737787 A>G), RS1000457581 (1:236727749 T>A,G)
Disease associations
OMIM: gene MIM:102573 | disease phenotypes: MIM:612158, MIM:192600, MIM:618654, MIM:618655, MIM:600996, MIM:604772, MIM:117000, MIM:214500, MIM:604169, MIM:187500, MIM:194200, MIM:115200
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| myopathy, congenital, with structured cores and z-line abnormalities | Strong | Autosomal dominant |
| ACTN2-related cardiac and skeletal myopathy | Strong | Autosomal dominant |
| dilated cardiomyopathy 1AA | Moderate | Autosomal dominant |
| intrinsic cardiomyopathy | Moderate | Autosomal dominant |
| familial isolated dilated cardiomyopathy | Supportive | Autosomal dominant |
| heart conduction disease | Limited | Autosomal dominant |
| myopathy, distal, 6, adult-onset, autosomal dominant | Limited | Unknown |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| ACTN2-related cardiac and skeletal myopathy | Definitive | AD |
Mondo (28): dilated cardiomyopathy 1AA (MONDO:0012808), familial hypertrophic cardiomyopathy (MONDO:0024573), myopathy, congenital, with structured cores and z-line abnormalities (MONDO:0032852), myopathy, distal, 6, adult-onset, autosomal dominant (MONDO:0032853), catecholaminergic polymorphic ventricular tachycardia 1 (MONDO:0011484), cardiomyopathy (MONDO:0004994), intrinsic cardiomyopathy (MONDO:0000591), ACTN2-related cardiac and skeletal myopathy (MONDO:0700349), hypertrophic cardiomyopathy (MONDO:0005045), dilated cardiomyopathy (MONDO:0005021), cardiomyopathy, familial hypertrophic, 23, with or without ventricular noncompaction (MONDO:0800347), hypertrophic cardiomyopathy 1 (MONDO:0008647), ventricular fibrillation (MONDO:0000190), central core myopathy (MONDO:0007294), neuromuscular disease (MONDO:0019056)
Orphanet (15): Familial isolated dilated cardiomyopathy (Orphanet:154), Rare familial disorder with hypertrophic cardiomyopathy (Orphanet:99739), Catecholaminergic polymorphic ventricular tachycardia (Orphanet:3286), Rare cardiomyopathy (Orphanet:167848), Rare hypertrophic cardiomyopathy (Orphanet:217569), Dilated cardiomyopathy (Orphanet:217604), Central core disease (Orphanet:597), Neuromuscular disease (Orphanet:68381), Chédiak-Higashi syndrome (Orphanet:167), Left ventricular noncompaction (Orphanet:54260), Tetralogy of Fallot (Orphanet:3303), Familial dilated cardiomyopathy (Orphanet:217607), Familial dilated cardiomyopathy with conduction defect due to LMNA mutation (Orphanet:300751), NON RARE IN EUROPE: Familial isolated hypertrophic cardiomyopathy (Orphanet:155), NON RARE IN EUROPE: Wolff-Parkinson-White syndrome (Orphanet:907)
HPO phenotypes
54 total (30 of 54 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000218 | High palate |
| HP:0000407 | Sensorineural hearing impairment |
| HP:0000597 | Ophthalmoparesis |
| HP:0000969 | Edema |
| HP:0001288 | Gait disturbance |
| HP:0001290 | Generalized hypotonia |
| HP:0001324 | Muscle weakness |
| HP:0001635 | Congestive heart failure |
| HP:0001639 | Hypertrophic cardiomyopathy |
| HP:0001640 | Cardiomegaly |
| HP:0001644 | Dilated cardiomyopathy |
| HP:0001678 | Atrioventricular block |
| HP:0001695 | Cardiac arrest |
| HP:0001706 | Endocardial fibroelastosis |
| HP:0001712 | Left ventricular hypertrophy |
| HP:0001727 | Thromboembolic stroke |
| HP:0002093 | Respiratory insufficiency |
| HP:0002460 | Distal muscle weakness |
| HP:0002650 | Scoliosis |
| HP:0002792 | Reduced vital capacity |
| HP:0002875 | Exertional dyspnea |
| HP:0003198 | Myopathy |
| HP:0003236 | Elevated circulating creatine kinase concentration |
| HP:0003457 | EMG abnormality |
| HP:0003557 | Increased variability in muscle fiber diameter |
| HP:0003621 | Juvenile onset |
| HP:0003693 | Distal amyotrophy |
| HP:0003701 | Proximal muscle weakness |
| HP:0003736 | Autophagic vacuoles |
GWAS associations
2 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002126_16 | Periodontitis (CDC/AAP) | 3.000000e-06 |
| GCST009391_795 | Metabolite levels | 7.000000e-06 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0010395 | sphingomyelin 22:0 measurement |
MeSH disease descriptors (14)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D009202 | Cardiomyopathies | C14.280.238 |
| D002311 | Cardiomyopathy, Dilated | C14.280.195.160; C14.280.238.070; C16.320.488.750 |
| D002312 | Cardiomyopathy, Hypertrophic | C14.280.238.100; C14.280.484.048.750.070.160 |
| D024741 | Cardiomyopathy, Hypertrophic, Familial | C14.280.238.100.500; C14.280.484.048.750.070.160.500; C16.320.160 |
| D002609 | Chediak-Higashi Syndrome | C11.270.040.772; C15.378.553.774.257; C16.320.798.375; C20.673.774.257; C20.673.795.375 |
| D008133 | Long QT Syndrome | C14.280.067.565; C14.280.123.625; C16.131.240.400.715; C23.550.073.547 |
| D020512 | Myopathy, Central Core | C05.651.575.300; C10.668.491.550.300 |
| D009468 | Neuromuscular Diseases | C10.668 |
| D013771 | Tetralogy of Fallot | C14.240.400.849; C14.280.400.849; C16.131.240.400.849 |
| D014693 | Ventricular Fibrillation | C14.280.067.922; C23.550.073.922 |
| D014927 | Wolff-Parkinson-White Syndrome | C14.280.067.780.977; C14.280.123.750.977; C16.131.240.400.980 |
| C563409 | Arrhythmogenic Right Ventricular Dysplasia, Familial, 2 (supp.) | |
| C567407 | Cardiomyopathy, Dilated, 1AA (supp.) | |
| C536231 | familial dilated cardiomyopathy (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
40 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | affects cotreatment, decreases methylation, increases expression | 2 |
| Benzo(a)pyrene | affects methylation, increases methylation | 2 |
| Cadmium | decreases expression, increases abundance, increases expression | 2 |
| Cocaine | increases expression | 2 |
| Doxorubicin | affects expression, increases expression | 2 |
| Cadmium Chloride | decreases expression, increases abundance, increases expression | 2 |
| glycidyl methacrylate | increases expression | 1 |
| ascorbate-2-phosphate | affects binding, affects cotreatment, increases expression | 1 |
| sodium arsenite | increases expression | 1 |
| benzo(e)pyrene | increases methylation | 1 |
| 4-(2-(5,6,7,8-tetrahydro-5,5,8,8-tetramethyl-2-naphthalenyl)-1-propenyl)benzoic acid | affects cotreatment, decreases expression | 1 |
| S-(1,2-dichlorovinyl)cysteine | decreases reaction, increases expression | 1 |
| JP8 aviation fuel | decreases expression | 1 |
| monomethylarsonous acid | increases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| Chir 99021 | affects cotreatment, decreases expression, affects binding, increases expression | 1 |
| abrine | increases expression | 1 |
| bisphenol S | decreases methylation | 1 |
| XAV939 | affects binding, affects cotreatment, increases expression, decreases expression | 1 |
| incobotulinumtoxinA | decreases expression | 1 |
| LDN 193189 | affects cotreatment, increases expression | 1 |
| 3-(4-pyridyl)-1H-indole | affects cotreatment, decreases expression | 1 |
| Sunitinib | decreases expression | 1 |
| Fulvestrant | affects cotreatment, decreases methylation | 1 |
| Acetaminophen | decreases expression | 1 |
| Ascorbic Acid | affects binding, affects cotreatment, decreases expression | 1 |
| Heroin | decreases expression | 1 |
| Hydrocortisone | affects cotreatment, decreases expression | 1 |
| Lead | affects expression | 1 |
| Lipopolysaccharides | increases expression, decreases reaction | 1 |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00348530 | PHASE4 | UNKNOWN | Carvedilol Versus Verapamil in Chronic Heart Failure Secondary to Non-Ischemic Cardiomyopathy |
| NCT00371891 | PHASE4 | COMPLETED | Ontario Multidetector Computed Tomographic (MDCT) Coronary Angiography Study (OMCAS) |
| NCT00401856 | PHASE4 | COMPLETED | CMR to Assess Fibrosis in Cardiomyopathy Using Eplerenone |
| NCT00559338 | PHASE4 | COMPLETED | Impact of Nesiritide Infusion for Decompensated Heart Failure in the Emergency Department |
| NCT00606775 | PHASE4 | UNKNOWN | The Preventive Efficacy of Carvedilol on Cardiac Dysfunction in Duchenne Muscular Dystrophy |
| NCT00658203 | PHASE4 | COMPLETED | Clinical Evaluation on Advanced Resynchronization |
| NCT00701220 | PHASE4 | COMPLETED | Statin Therapy for Ischemic and Nonischemic Cardiomyopathy |
| NCT00800761 | PHASE4 | COMPLETED | Intensive Combined Chelation Therapy for Iron-Induced Cardiac Disease in Patients With Thalassemia Major |
| NCT00806390 | PHASE4 | TERMINATED | Prevention of Anthracycline or Trastuzumab Induced Cardiomyopathy by Metoprolol |
| NCT01006473 | PHASE4 | COMPLETED | Exercise Training in Chagas Cardiomyopathy |
| NCT01261065 | PHASE4 | COMPLETED | Mechanisms of Improvement With Beta-Blocker Treatment in Heart Failure |
| NCT01345188 | PHASE4 | COMPLETED | Ranolazine in Ischemic Cardiomyopathy |
| NCT01868841 | PHASE4 | COMPLETED | 123-I mIBG (AdreView) Heart-to-Mediastinal (H/M) Ratio and SPECT Imaging on a Small Field of View-High Efficiency Cardiac SPECT System |
| NCT02640846 | PHASE4 | UNKNOWN | Effects of Levosimendan, Milrinone and Norepinephrine on Left and Right Ventricular Function in Septic Shock |
| NCT03228823 | PHASE4 | UNKNOWN | Prospective Assessment of Premature Ventricular Contractions Suppression in Cardiomyopathy(PAPS) |
| NCT04323852 | PHASE4 | COMPLETED | Can Vitamin D Reduce Heart Muscle Damage After Bypass Surgery? |
| NCT05034432 | PHASE4 | RECRUITING | The PIVATAL Study -Study of Ventricular Arrhythmia (VTA) Ablation in Left Ventricular Assist Device (LVAD) Patients |
| NCT05718128 | PHASE4 | RECRUITING | Clinical Study of Endocardial Myocardial Biopsy |
| NCT06964464 | PHASE4 | RECRUITING | Comparative Effectiveness of Carvedilol Versus Metoprolol Succinate in Heart Failure Patients With an Implantable Cardioverter Defibrillator |
| NCT00170183 | PHASE3 | COMPLETED | Brain Natriuretic Peptide (BNP) to Preserve Renal Function in Hospitalized Patients With Heart Failure |
| NCT00270387 | PHASE3 | COMPLETED | A Study of Short-Term Outcomes and Economic Impact For Patients With Worsening Congestive Heart Failure When Natrecor (Nesiritide) is Added to Standard-Care Therapy, Compared to Administration of Placebo With Standard-Care Therapy |
| NCT00321295 | PHASE3 | COMPLETED | Biventricular Pacing In Patients With Left Ventricular Dysfunction After Cardiovascular Surgery |
| NCT00483197 | PHASE3 | UNKNOWN | VentrAssistTM LVAD as a Bridge to Cardiac Transplantation - Pivotal Trial |
| NCT00490321 | PHASE3 | UNKNOWN | VentrAssistTM LVAD for the Treatment of Advanced Heart Failure - Destination Therapy |
| NCT00626028 | PHASE3 | COMPLETED | Comparison of Inhaled Nitric Oxide and Oxygen in Participants Reactivity During Acute Pulmonary Vasodilator Testing |
| NCT01013714 | PHASE3 | UNKNOWN | Cardiac Sympathetic Denervation for Prevention of Ventricular Tachyarrhythmias |
| NCT01217827 | PHASE3 | COMPLETED | Implantable Cardioverter-Defibrillator Use in the VA System |
| NCT01648634 | PHASE3 | COMPLETED | Nebivolol for the Prevention of Left Ventricular Systolic Dysfunction in Patients With Duchenne Muscular Dystrophy |
| NCT02924285 | PHASE3 | COMPLETED | Catheter Ablation Versus Amiodarone for Therapy of Premature Ventricular Contractions in Patients With Structural Heart Disease |
| NCT03860935 | PHASE3 | COMPLETED | Efficacy and Safety of AG10 in Subjects With Transthyretin Amyloid Cardiomyopathy |
| NCT04166331 | PHASE3 | COMPLETED | Adjunctive DobutAmine in sePtic Cardiomyopathy With Tissue Hypoperfusion |
| NCT05175066 | PHASE3 | COMPLETED | Bisoprolol Administration to Prevent Anthracycline-induced Cardiotoxicity |
| NCT05237323 | PHASE3 | COMPLETED | Micophenolate Mofetil Versus Azathioprine in Myocarditis |
| NCT06158698 | PHASE3 | RECRUITING | CMP-MYTHiC Trial and Registry - CardioMyoPathy With MYocarditis THerapy With Colchicine |
| NCT06563895 | PHASE3 | RECRUITING | Acoramidis Transthyretin Amyloidosis Prevention Trial in the Young (ACT-EARLY) Study in Asymptomatic Carriers of a Pathogenic TTR Variant |
| NCT06846086 | PHASE3 | RECRUITING | Cardioprotective Effects of Melatonin in Patients With Cardiomyopathy |
| NCT07116473 | PHASE3 | NOT_YET_RECRUITING | To Evaluate the Long-term Safety and Tolerability of Acoramidis in Participants With Newly Diagnosed ATTR-CM (ACT-EARLY OLE) |
| NCT05122975 | PHASE2 | TERMINATED | Treatment of an Inherited Ventricular Arrhythmia |
| NCT06005428 | PHASE2 | TERMINATED | Effectiveness of CRD-4730 in Participants With Catecholaminergic Polymorphic Ventricular Tachycardia (CPVT) |
| NCT00185250 | PHASE2 | COMPLETED | Betaferon/ Betaseron (Interferon Beta-1b) in Patients With Chronic Viral Cardiomyopathy |
Related Atlas pages
- Associated diseases: dilated cardiomyopathy 1AA, myopathy, congenital, with structured cores and z-line abnormalities, heart conduction disease, myopathy, distal, 6, adult-onset, autosomal dominant, intrinsic cardiomyopathy, familial isolated dilated cardiomyopathy, ACTN2-related cardiac and skeletal myopathy
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): ACTN2-related cardiac and skeletal myopathy, cardiomyopathy, cardiomyopathy, familial hypertrophic, 23, with or without ventricular noncompaction, catecholaminergic polymorphic ventricular tachycardia, catecholaminergic polymorphic ventricular tachycardia 1, central core myopathy, Chediak-Higashi syndrome, congestive heart failure, dilated cardiomyopathy, dilated cardiomyopathy 1A, dilated cardiomyopathy 1AA, familial dilated cardiomyopathy, familial hypertrophic cardiomyopathy, heart conduction disease, hypertrophic cardiomyopathy, hypertrophic cardiomyopathy 1, intrinsic cardiomyopathy, left ventricular noncompaction, left ventricular noncompaction 1, long QT syndrome, myopathy, myopathy, congenital, with structured cores and z-line abnormalities, myopathy, distal, 6, adult-onset, autosomal dominant, neuromuscular disease, periodontitis, tetralogy of fallot, ventricular fibrillation, Wolff-Parkinson-White syndrome