ADAM9

gene
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Also known as MDC9KIAA0021MCMPMltng

Summary

ADAM9 (ADAM metallopeptidase domain 9, HGNC:216) is a protein-coding gene on chromosome 8p11.22, encoding Disintegrin and metalloproteinase domain-containing protein 9 (Q13443). Metalloprotease that cleaves and releases a number of molecules with important roles in tumorigenesis and angiogenesis, such as TEK, KDR, EPHB4, CD40, VCAM1 and CDH5.

This gene encodes a member of the ADAM (a disintegrin and metalloprotease domain) family. Members of this family are membrane-anchored proteins structurally related to snake venom disintegrins, and have been implicated in a variety of biological processes involving cell-cell and cell-matrix interactions, including fertilization, muscle development, and neurogenesis. The protein encoded by this gene interacts with SH3 domain-containing proteins, binds mitotic arrest deficient 2 beta protein, and is also involved in TPA-induced ectodomain shedding of membrane-anchored heparin-binding EGF-like growth factor. Several alternatively spliced transcript variants have been identified for this gene.

Source: NCBI Gene 8754 — RefSeq curated summary.

At a glance

  • Gene–disease (curated): ADAM9-related retinopathy (Definitive, ClinGen) — +2 more curated relationships
  • GWAS associations: 1
  • Clinical variants (ClinVar): 599 total — 23 pathogenic, 9 likely-pathogenic
  • Phenotypes (HPO): 17
  • Druggable target: yes — 3 molecules with ChEMBL bioactivity
  • Dosage sensitivity (ClinGen): haploinsufficiency autosomal recessive, triplosensitivity no evidence
  • MANE Select transcript: NM_003816

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:216
Approved symbolADAM9
NameADAM metallopeptidase domain 9
Location8p11.22
Locus typegene with protein product
StatusApproved
AliasesMDC9, KIAA0021, MCMP, Mltng
Ensembl geneENSG00000168615
Ensembl biotypeprotein_coding
OMIM602713
Entrez8754

Gene structure

Transcript identifiers

Ensembl transcripts: 33 — 15 nonsense_mediated_decay, 13 protein_coding, 4 retained_intron, 1 protein_coding_CDS_not_defined

ENST00000379917, ENST00000463437, ENST00000466936, ENST00000468065, ENST00000481058, ENST00000481513, ENST00000481873, ENST00000484143, ENST00000487273, ENST00000676489, ENST00000676617, ENST00000676643, ENST00000676669, ENST00000676765, ENST00000676919, ENST00000676936, ENST00000677004, ENST00000677137, ENST00000677165, ENST00000677359, ENST00000677582, ENST00000677908, ENST00000678253, ENST00000678474, ENST00000678540, ENST00000678730, ENST00000678863, ENST00000679268, ENST00000893524, ENST00000893525, ENST00000893526, ENST00000893527, ENST00000966952

RefSeq mRNA: 1 — MANE Select: NM_003816 NM_003816

CCDS: CCDS6112

Canonical transcript exons

ENST00000487273 — 22 exons

ExonStartEnd
ENSE000011290323908264139082721
ENSE000011290383907129839071403
ENSE000011290463905557739055772
ENSE000011553083902667739026810
ENSE000011553183902580339025884
ENSE000011553263902315639023325
ENSE000011553363902164339021714
ENSE000011553463901721939017414
ENSE000011553533901611839016194
ENSE000011570323904194639042117
ENSE000011965853908296839083073
ENSE000012743123905448139054573
ENSE000012743643901396539014043
ENSE000012743743901165839011716
ENSE000012743833900788639007983
ENSE000018823223910360739105261
ENSE000034676273909125939091346
ENSE000034763663910186339101930
ENSE000036106353907722839077411
ENSE000036426153909004739090188
ENSE000036446623901885339018918
ENSE000038457183899697338997160

Expression profiles

Bgee: expression breadth ubiquitous, 215 present calls, max score 98.35.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 79.1277 / max 1133.3668, expressed in 1819 samples.

FANTOM5 promoters (5 alternative TSS)

Promoter IDTPM avgSamples expressed
8857171.79031795
885693.85231255
885682.34381262
885700.9863617
885750.155167

Top tissues by expression

237 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
stromal cell of endometriumCL:000225598.35gold quality
islet of LangerhansUBERON:000000697.59gold quality
gall bladderUBERON:000211096.99gold quality
smooth muscle tissueUBERON:000113596.42gold quality
right lungUBERON:000216796.29gold quality
descending thoracic aortaUBERON:000234595.62gold quality
thoracic aortaUBERON:000151595.33gold quality
calcaneal tendonUBERON:000370195.33gold quality
ascending aortaUBERON:000149695.29gold quality
upper lobe of left lungUBERON:000895295.18gold quality
rectumUBERON:000105295.09gold quality
right coronary arteryUBERON:000162594.98gold quality
minor salivary glandUBERON:000183094.96gold quality
vermiform appendixUBERON:000115494.45gold quality
upper lobe of lungUBERON:000894894.42gold quality
body of stomachUBERON:000116194.34gold quality
left coronary arteryUBERON:000162694.26gold quality
aortaUBERON:000094794.25gold quality
popliteal arteryUBERON:000225093.85gold quality
tibial arteryUBERON:000761093.85gold quality
adrenal tissueUBERON:001830393.79gold quality
ventricular zoneUBERON:000305393.63gold quality
tendonUBERON:000004393.03gold quality
colonic epitheliumUBERON:000039793.02gold quality
buccal mucosa cellCL:000233692.65gold quality
stomachUBERON:000094592.41gold quality
left adrenal glandUBERON:000123492.40gold quality
muscle layer of sigmoid colonUBERON:003580592.31gold quality
left adrenal gland cortexUBERON:003582592.19gold quality
heart left ventricleUBERON:000208492.17gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 2.

ExperimentMarker?Max mean expression
E-HCAD-13yes11.53
E-ANND-3yes7.52

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): AR

miRNA regulators (miRDB)

157 targeting ADAM9, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-126-5P100.0072.713180
HSA-MIR-30A-5P100.0076.313233
HSA-MIR-30B-5P100.0076.293248
HSA-MIR-30C-5P100.0076.293248
HSA-MIR-30D-5P100.0076.323233
HSA-MIR-30E-5P100.0076.323242
HSA-MIR-3924100.0072.092394
HSA-MIR-518D-5P100.0067.51979
HSA-MIR-518E-5P100.0067.66954
HSA-MIR-518F-5P100.0067.51979
HSA-MIR-519A-5P100.0067.66954
HSA-MIR-519B-5P100.0067.66954
HSA-MIR-519C-5P100.0067.66954
HSA-MIR-520C-5P100.0067.51979
HSA-MIR-522-5P100.0067.66954
HSA-MIR-523-5P100.0067.66954
HSA-MIR-526A-5P100.0067.51979
HSA-MIR-513A-5P100.0069.772465
HSA-MIR-4795-3P100.0074.624024
HSA-MIR-5011-5P100.0083.465820
HSA-MIR-428299.9975.366408
HSA-MIR-548AW99.9972.573559
HSA-MIR-548C-3P99.9974.017587
HSA-MIR-477599.9875.006394
HSA-MIR-4789-5P99.9870.762721
HSA-MIR-569699.9872.364487
HSA-MIR-302E99.9670.742669
HSA-MIR-548AJ-3P99.9673.385345
HSA-MIR-548X-3P99.9673.385345
HSA-MIR-570-3P99.9672.414910

Functional genomics

ClinGen dosage: haploinsufficiency 30 (autosomal recessive), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map

Literature-anchored findings (GeneRIF, showing 40)

  • ADAM9 is involved in monocyte fusion. (PMID:11831872)
  • The downregulated expression of ADAM9 may serve as a marker for anterior polar cataracts. (PMID:11955914)
  • cloning of a novel form of human ADAM9 (hADAM9s) which has an alpha-secretase activity for Amyloid Protein Precursor (PMID:12054541)
  • First evidence is presented of ADAM9 as an insulin-like growth factor binding protein-5 (IGFBP-5) protease produced and secreted by osteoblasts in culture, able to degrade IGFBP-5 with high potency, thereby regulating the critical activity of IGFBP-5. (PMID:12484779)
  • The results indicate that ADAM9, ADAM10, and ADAM17, members of the disintegrin and metalloprotease family, catalyze alpha-secretory cleavage and therefore act as alpha-secretases in A172 cells. (PMID:12535668)
  • Expression of ADAM-9 mRNA and protein in human breast cancer. (PMID:12767059)
  • Cytoplasmic ADAM9 overexpression is associated with poor differentiation in ductal adenocarcinoma (PMID:14997207)
  • ADAM9 overexpression enhances cell adhesion and invasion of non-small cell lung cancer cells via modulation of other adhesion molecules and changes in sensitivity to growth factors, thereby promoting metastatic capacity to the brain. (PMID:15205330)
  • In melanoma ADAM-9 protein expression appeared to be restricted to the melanoma cells within the invading front. (PMID:15856464)
  • In conclusion, our findings are consistent with the hypothesis that FHL-2 and ADAM-9 are important modulators of IGFBP-5 actions and are, in part, regulated in a coordinated manner in bone (PMID:16311053)
  • ADAM9 does not behave as a genuine alpha-secretase but rather acts as an important upstream regulator of ADAM10 activity. (PMID:16806063)
  • Intracellular ROS and/or hydrogen peroxide, generated by cell stress, regulate ADAM9 expression. ADAM9 may support prostate cancer cell survival and progression. (PMID:17018608)
  • These findings suggest that reactive oxygen species is a common mediator responsible for ADAM9 protein induction in human prostate cancer cells, downstream from androgen receptor, and stress response signaling. (PMID:17342749)
  • the ADAM-9 adhesive domain plays a role in regulating the motility of cells by interaction with beta1 integrins and modulates MMP synthesis. (PMID:17704059)
  • ADAM9 is overexpressed in prostate cancer cases and is an independent prognostic marker of PSA relapse-free survival following radical prostatectomy. (PMID:18061337)
  • ADAM9 plays a crucial role in UV-induced EGFR activation and is overexpressed in skin cancer cell lines (PMID:19003995)
  • The data of this suggested that promoter polymorphisms which regulate ADAM9 transcription are protective against SAD. (PMID:19237226)
  • involved in advanced atherosclerosis, in catalytically active form, most notably associated with cells of monocytic origin (PMID:19253070)
  • Cell migration in response to the amino-terminal fragment of urokinase requires epidermal growth factor receptor activation through an ADAM9/10-mediated mechanism. (PMID:19394555)
  • ADAM9 is a CRD gene and also is a form of pathology wherein retinal disease first manifests at the POS-RPE junction. (PMID:19409519)
  • ADAM9 expression is low in the squamous epithelium of the cervix, but is increased in CIN3 lesions as well as SCCs being the increase in both cases statistically significant. (PMID:19473694)
  • the role of the disintegrin domain of the human ADAM9 (ADAM9D) on the adhesion of breast tumor cells and platelets to collagen I (PMID:19505527)
  • Data show that the expression levels MMP1, MMP9, ADAM9 and TIMP3 were altered in drug-resistant sublines. (PMID:19543729)
  • Experiments revealed that ADAM9 and ADAM10, but not ADAM17, are involved in the shedding of PrP(C) and that ADAM9 exerts its effect on PrP(C) shedding via ADAM10. (PMID:19564338)
  • disintegrin and metalloprotease-9 is overexpressed in hepatocellular carcinoma and can be used as a prognostic marker (PMID:20388695)
  • is expressed in adenoid cystic carcinoma-associated metastasis (PMID:20422344)
  • ADAM9 plays a crucial role in prostate cancer progression and therapeutic resistance in part by altering E-cadherin and integrin expression. (PMID:20672324)
  • Secreted variants of ADAM9 are a key determinant in manifestation of aggressive migratory phenotypes associated with breast cancer progression. (PMID:20736367)
  • ADAM-9 expression plays an important role in mediating cell-cell contacts between fibroblasts and melanoma cells and that these interactions contribute to proteolytic activities required during invasion of melanoma cells. (PMID:21135106)
  • ADAM10 activity is regulated by inhibition of ADAM9, and this regulation may be used to control shedding of amyloid precursor protein by enhancing alpha-secretase activity, a key regulatory step in the etiology of Alzheimer disease (PMID:21956108)
  • The miR-126/ADAM9 axis plays essential role in the inhibition of invasive growth of pancreatic cancer cells. (PMID:22064652)
  • Transient transfection of ADAM9 and ACE cDNAs into HEK293 cells demonstrated that ADAM9 requires both membrane anchorage and its catalytic domain to shed ACE. (PMID:22480688)
  • ADAM9 expression was low in castration resistant prostate cancer (CRPC), correlated with poor prognosis and might be involved in the succession from hormonal sensitive prostate cancer (HSPC) to CRPC by various functions. (PMID:23106877)
  • a novel molecular mechanism of ADAM9 in the regulation of prostate cancer cell proliferation. (PMID:23342005)
  • The over-expression of MGAM was confirmed with a 6.6 fold increase in expression at the mRNA level whereas the fold change in ADAM9 demonstrated a 1.6 fold increase. (PMID:23405089)
  • ADAM19 was upregulated in patients with ulcerative colitis and, to a lesser extent, in patients with Crohn’s disease compared with normal controls. In contrast, ADAM9 and ADAM10 expression did not differ between patients with IBD and controls. (PMID:23429442)
  • miR-126&126* restored expressions play a tumor suppressor role by directly regulating ADAM9 and MMP7 in melanoma. (PMID:23437250)
  • ADAM9 is an important molecule in the processes of invasion and metastasis. (PMID:23499592)
  • The expression of circulating ADAM9 is down-regulated in pulmonary sarcoidosis. (PMID:23857158)
  • ADAM9 up-regulates N-cadherin via miR-218 suppression in lung adenocarcinoma cells. (PMID:24705471)

Cross-species orthologs

3 orthologs

OrganismSymbolGene ID
danio_rerioadam9aENSDARG00000010070
mus_musculusAdam9ENSMUSG00000031555
rattus_norvegicusAdam9ENSRNOG00000017231

Paralogs (20): ADAM22 (ENSG00000008277), ADAM28 (ENSG00000042980), ADAM7 (ENSG00000069206), ADAM11 (ENSG00000073670), ADAM2 (ENSG00000104755), ADAM23 (ENSG00000114948), ADAM20 (ENSG00000134007), ADAMDEC1 (ENSG00000134028), ADAM30 (ENSG00000134249), ADAM19 (ENSG00000135074), ADAM10 (ENSG00000137845), ADAM21 (ENSG00000139985), ADAM15 (ENSG00000143537), ADAM12 (ENSG00000148848), ADAM33 (ENSG00000149451), ADAM8 (ENSG00000151651), ADAM17 (ENSG00000151694), ADAM29 (ENSG00000168594), ADAM18 (ENSG00000168619), ADAM32 (ENSG00000197140)

Protein

Protein identifiers

Disintegrin and metalloproteinase domain-containing protein 9Q13443 (reviewed: Q13443)

Alternative names: Cellular disintegrin-related protein, Meltrin-gamma, Metalloprotease/disintegrin/cysteine-rich protein 9, Myeloma cell metalloproteinase

All UniProt accessions (18): A0A7I2V2E1, A0A7I2V2Z6, A0A7I2V303, A0A7I2V3B5, A0A7I2V3C1, A0A7I2V3I3, A0A7I2V3W3, A0A7I2V4B3, A0A7I2V4T8, A0A7I2V5C0, A0A7I2V5N8, A0A7I2V5Q0, A0A7I2YQ97, A0AVL1, Q13443, C9J6H5, C9JPM3, F8WC54

UniProt curated annotations — full annotation on UniProt →

Function. Metalloprotease that cleaves and releases a number of molecules with important roles in tumorigenesis and angiogenesis, such as TEK, KDR, EPHB4, CD40, VCAM1 and CDH5. May mediate cell-cell, cell-matrix interactions and regulate the motility of cells via interactions with integrins. May act as alpha-secretase for amyloid precursor protein (APP).

Subunit / interactions. Interacts with SH3GL2 and SNX9 through its cytoplasmic tail. Interacts with ITGA6.

Subcellular location. Cell membrane Secreted.

Tissue specificity. Widely expressed. Expressed in chondrocytes. Isoform 2 is highly expressed in liver and heart.

Post-translational modifications. Proteolytically cleaved in the trans-Golgi network before it reaches the plasma membrane to generate a mature protein. The removal of the pro-domain occurs via cleavage at two different sites. Processed most likely by a pro-protein convertase such as furin, at the boundary between the pro-domain and the catalytic domain. An additional upstream cleavage pro-protein convertase site (Arg-56/Glu-57) has an important role in the activation of ADAM9. Phosphorylation is induced in vitro by phorbol-12-myristate-13-acetate (PMA).

Disease relevance. Cone-rod dystrophy 9 (CORD9) [MIM:612775] An inherited retinal dystrophy characterized by retinal pigment deposits visible on fundus examination, predominantly in the macular region, and initial loss of cone photoreceptors followed by rod degeneration. This leads to decreased visual acuity and sensitivity in the central visual field, followed by loss of peripheral vision. Severe loss of vision occurs earlier than in retinitis pigmentosa, due to cone photoreceptors degenerating at a higher rate than rod photoreceptors. The disease is caused by variants affecting the gene represented in this entry.

Activity regulation. Synthesized as an inactive form which is proteolytically cleaved to generate an active enzyme. Processing at the upstream site is particularly important for activation of the proenzyme, whereas processing at the boundary between the pro-domain and the catalytic domain does not appear to be essential. Inhibited by hydroxamic acid-based inhibitors.

Cofactor. Binds 1 zinc ion per subunit.

Miscellaneous. May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay.

Isoforms (2)

UniProt IDNamesCanonical?
Q13443-11yes
Q13443-22

RefSeq proteins (1): NP_003807* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR000742EGFDomain
IPR001590Peptidase_M12BDomain
IPR001762Disintegrin_domDomain
IPR002870Peptidase_M12B_NDomain
IPR006586ADAM_Cys-richDomain
IPR018358Disintegrin_CSConserved_site
IPR024079MetalloPept_cat_dom_sfHomologous_superfamily
IPR034027Reprolysin_adamalysinDomain
IPR036436Disintegrin_dom_sfHomologous_superfamily

Pfam: PF00200, PF01421, PF01562, PF08516

Enzyme classification (BRENDA):

  • EC 3.4.24.B9 — (BRENDA: organisms, substrates, inhibitors, Km, kcat entries)

UniProt features (41 total): disulfide bond 7, sequence conflict 7, glycosylation site 6, binding site 3, domain 3, site 2, modified residue 2, topological domain 2, splice variant 2, region of interest 2, signal peptide 1, chain 1, compositionally biased region 1, active site 1, transmembrane region 1

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-Q13443-F176.140.40

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Catalytic / active sites (3): 348; 56–57 (cleavage); 205–206 (cleavage; by furin-like protease)

Ligand- & substrate-binding residues (3): 347; 351; 357

Post-translational modifications (2): 758, 761

Disulfide bonds (7): 322–401, 363–385, 365–370, 473–493, 644–656, 650–662, 664–673

Glycosylation sites (6): 125, 144, 154, 231, 381, 487

Function

Pathways and Gene Ontology

Reactome pathways

3 pathways

IDPathway
R-HSA-1442490Collagen degradation
R-HSA-1474228Degradation of the extracellular matrix
R-HSA-1474244Extracellular matrix organization

MSigDB gene sets: 490 (showing top): GSE18804_SPLEEN_MACROPHAGE_VS_BRAIN_TUMORAL_MACROPHAGE_DN, GSE18804_BRAIN_VS_COLON_TUMORAL_MACROPHAGE_DN, GSE18804_SPLEEN_MACROPHAGE_VS_TUMORAL_MACROPHAGE_DN, MODULE_172, AHRARNT_01, MODULE_52, GOBP_EPITHELIUM_DEVELOPMENT, TAATAAT_MIR126, RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP, GOMF_METALLOPEPTIDASE_ACTIVITY, GOBP_RESPONSE_TO_PEPTIDE, GOBP_CELLULAR_RESPONSE_TO_LIPID, GOBP_RESPONSE_TO_CORTICOSTEROID, GOBP_CELLULAR_RESPONSE_TO_BIOTIC_STIMULUS, MODULE_64

GO Biological Process (27): membrane protein ectodomain proteolysis (GO:0006509), cell adhesion (GO:0007155), cell-matrix adhesion (GO:0007160), transforming growth factor beta receptor signaling pathway (GO:0007179), integrin-mediated signaling pathway (GO:0007229), response to manganese ion (GO:0010042), cell migration (GO:0016477), protein processing (GO:0016485), keratinocyte differentiation (GO:0030216), positive regulation of cell migration (GO:0030335), membrane protein intracellular domain proteolysis (GO:0031293), cell adhesion mediated by integrin (GO:0033627), positive regulation of cell adhesion mediated by integrin (GO:0033630), cell-cell adhesion mediated by integrin (GO:0033631), positive regulation of macrophage fusion (GO:0034241), response to tumor necrosis factor (GO:0034612), monocyte activation (GO:0042117), response to hydrogen peroxide (GO:0042542), amyloid precursor protein catabolic process (GO:0042987), positive regulation of MAPK cascade (GO:0043410), positive regulation of protein secretion (GO:0050714), positive regulation of membrane protein ectodomain proteolysis (GO:0051044), response to glucocorticoid (GO:0051384), positive regulation of keratinocyte migration (GO:0051549), response to calcium ion (GO:0051592), cellular response to lipopolysaccharide (GO:0071222), proteolysis (GO:0006508)

GO Molecular Function (12): metalloendopeptidase activity (GO:0004222), protein kinase C binding (GO:0005080), integrin binding (GO:0005178), collagen binding (GO:0005518), metallopeptidase activity (GO:0008237), SH3 domain binding (GO:0017124), laminin binding (GO:0043236), metal ion binding (GO:0046872), metalloendopeptidase activity involved in amyloid precursor protein catabolic process (GO:1902945), protein binding (GO:0005515), peptidase activity (GO:0008233), hydrolase activity (GO:0016787)

GO Cellular Component (8): obsolete extracellular space (GO:0005615), plasma membrane (GO:0005886), focal adhesion (GO:0005925), external side of plasma membrane (GO:0009897), cell surface (GO:0009986), extracellular exosome (GO:0070062), extracellular region (GO:0005576), membrane (GO:0016020)

Reactome top-level categories

Rollup of top-2 pathways:

CategoryPathways
Degradation of the extracellular matrix1
Extracellular matrix organization1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
cellular anatomical structure3
membrane protein proteolysis2
cell adhesion mediated by integrin2
protein-containing complex binding2
cellular process1
cell-substrate adhesion1
cellular response to transforming growth factor beta stimulus1
transforming growth factor beta receptor superfamily signaling pathway1
cell surface receptor signaling pathway1
response to metal ion1
cell motility1
proteolysis1
protein maturation1
epidermal cell differentiation1
skin development1
cell migration1
regulation of cell migration1
positive regulation of cell motility1
cell adhesion1
regulation of cell adhesion mediated by integrin1
positive regulation of cell adhesion1
cell-cell adhesion1
macrophage fusion1
regulation of macrophage fusion1
positive regulation of syncytium formation by plasma membrane fusion1
response to cytokine1
myeloid leukocyte activation1
response to reactive oxygen species1
amyloid precursor protein metabolic process1
MAPK cascade1
regulation of MAPK cascade1
positive regulation of intracellular signal transduction1
endopeptidase activity1
metallopeptidase activity1
protein kinase binding1
signaling receptor binding1
cell adhesion molecule binding1
peptidase activity1
protein domain specific binding1
protein binding1

Protein interactions and networks

STRING

1228 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
ADAM9SNX9Q9Y5X1967
ADAM9MAD2L2Q9UI95859
ADAM9MAD2L1Q13257711
ADAM9APPP05067691
ADAM9PACSIN3Q9UKS6681
ADAM9SH3GL2Q99962678
ADAM9GP6Q9HCN6659
ADAM9CLEC1BQ9P126640
ADAM9ADAM17P78536633
ADAM9SELPP16109632
ADAM9PITPNM3Q9BZ71629
ADAM9ADAM10O14672627
ADAM9RPGRIP1Q96KN7615
ADAM9RAX2Q96IS3613
ADAM9EGFP01133611

IntAct

136 interactions, top by confidence:

ABTypeScore
VEGFDADAM9psi-mi:“MI:0914”(association)0.640
CRIPTOAIPpsi-mi:“MI:0914”(association)0.640
SNX9WASLpsi-mi:“MI:0914”(association)0.640
MAD2L2ADAM9psi-mi:“MI:0915”(physical association)0.630
ADAM9SNX9psi-mi:“MI:0407”(direct interaction)0.590
CANXPGRMC1psi-mi:“MI:0914”(association)0.570
ADAM9SNX18psi-mi:“MI:0407”(direct interaction)0.560
GPHA2PLXNA2psi-mi:“MI:0914”(association)0.530
CD1BTOR1Bpsi-mi:“MI:0914”(association)0.530
SCGB1D4EGFRpsi-mi:“MI:0914”(association)0.530
PLOD2psi-mi:“MI:0914”(association)0.530
FBXO2TMEM131Lpsi-mi:“MI:0914”(association)0.530
ADGRG5KLRG2psi-mi:“MI:0914”(association)0.530
HTR2CKLRG2psi-mi:“MI:0914”(association)0.530
CRPQSOX1psi-mi:“MI:0914”(association)0.530
TMX1NRP1psi-mi:“MI:0914”(association)0.530
INSL5COCHpsi-mi:“MI:0914”(association)0.530
OCLNDNAJC13psi-mi:“MI:0914”(association)0.530
EPPINUMPSpsi-mi:“MI:0914”(association)0.530
TIMP3ZZEF1psi-mi:“MI:0914”(association)0.530

BioGRID (191): ADAM9 (Affinity Capture-MS), ADAM9 (Affinity Capture-MS), ADAM9 (Affinity Capture-MS), ADAM9 (Affinity Capture-MS), ADAM9 (Affinity Capture-MS), ADAM9 (Affinity Capture-MS), ADAM9 (Affinity Capture-MS), ADAM9 (Co-fractionation), ADAM9 (Affinity Capture-MS), ADAM9 (Affinity Capture-Western), ADAM9 (Affinity Capture-Western), ADAM9 (Affinity Capture-MS), ADAM9 (Affinity Capture-MS), ADAM9 (Affinity Capture-MS), ADAM9 (Affinity Capture-MS)

ESM2 similar proteins: O35674, O43184, O43506, O75173, O88839, O95450, P57110, P58459, P59384, P59511, P70505, P78325, P79331, P97857, Q05910, Q13443, Q13444, Q14114, Q1EHB3, Q4VC17, Q5RFQ8, Q60813, Q61072, Q61824, Q62179, Q64151, Q68SA9, Q69Z28, Q8BNJ2, Q8C9W3, Q8TE57, Q8TE58, Q8TE60, Q8WXS8, Q924X6, Q9ESP7, Q9H013, Q9H324, Q9JI76, Q9JLN6

Diamond homologs: A0A0B4U9L8, A0A6B7FMR5, A2CJE2, A2CJE3, A2CJE4, A3R0T9, A4PBQ9, A8QL48, A8QL49, A8QL59, B8K1W0, C0LZJ5, C5H5D1, C5H5D2, C5H5D3, C5H5D4, C5H5D5, C5H5D6, C9E1R8, C9E1S0, D3TTC1, D3TTC2, D5LMJ3, D6PXE8, D8VNS0, F8RKV9, F8RKW0, F8RKW1, F8S108, G5EFD5, J3S829, J3S830, J3SDW6, J3SDW8, O35227, O35674, O42138, O43184, O77780, O88839

SIGNOR signaling

2 interactions.

AEffectBMechanism
ADAM9“down-regulates quantity by destabilization”FGFR2cleavage
MMP14“down-regulates quantity by destabilization”ADAM9cleavage

Enriched among interaction partners

Reactome pathways and GO biological processes over-represented among this gene’s 156 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.

Reactome pathways:

PathwayPartnersFoldFDR
Metal ion SLC transporters531.0×6e-05
Signaling by phosphorylated juxtamembrane, extracellular and kinase domain KIT mutants526.8×6e-05
Downstream signal transduction519.6×2e-04
Signaling by SCF-KIT615.4×1e-04
NCAM signaling for neurite out-growth514.0×6e-04
R-HSA-42536659.3×2e-03
Clathrin-mediated endocytosis87.0×5e-04
Cargo recognition for clathrin-mediated endocytosis66.5×4e-03

GO biological processes:

GO termPartnersFoldFDR
zinc ion transmembrane transport525.4×7e-04
T cell receptor signaling pathway77.7×5e-03

Disease & clinical

Clinical variants and AI predictions

ClinVar

599 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic23
Likely pathogenic9
Uncertain significance259
Likely benign220
Benign29

Top pathogenic / likely-pathogenic (30)

Variant IDHGVSClassification
1184447NM_003816.3(ADAM9):c.1588_1591+10delPathogenic
1410127NM_003816.3(ADAM9):c.543_546dup (p.Glu183fs)Pathogenic
1452105NM_003816.3(ADAM9):c.1420C>T (p.Arg474Ter)Pathogenic
1804635NM_003816.3(ADAM9):c.17_18del (p.Arg6fs)Pathogenic
1879709NC_000008.11:g.39018852GA[1]Pathogenic
189795NM_003816.3(ADAM9):c.1396-2A>GPathogenic
2134415NM_003816.3(ADAM9):c.1284_1285del (p.Cys428_Asp429delinsTer)Pathogenic
2424769NC_000008.10:g.(?38911980)(38928942_?)delPathogenic
2798666NM_003816.3(ADAM9):c.399T>A (p.Cys133Ter)Pathogenic
2811859NM_003816.3(ADAM9):c.1802G>A (p.Trp601Ter)Pathogenic
3068523NM_003816.3(ADAM9):c.702del (p.Ala234_Val235insTer)Pathogenic
3069202NM_003816.3(ADAM9):c.1189A>T (p.Lys397Ter)Pathogenic
3245572NC_000008.10:g.(?38913076)(38928942_?)delPathogenic
3248796NM_003816.3(ADAM9):c.2020G>T (p.Glu674Ter)Pathogenic
3727419NM_003816.3(ADAM9):c.735C>A (p.Tyr245Ter)Pathogenic
373092NM_003816.3(ADAM9):c.196-1G>APathogenic
6876NM_003816.3(ADAM9):c.1130+1G>APathogenic
6877NM_003816.3(ADAM9):c.766C>T (p.Arg256Ter)Pathogenic
6878NM_003816.3(ADAM9):c.490C>T (p.Arg164Ter)Pathogenic
6879NM_003816.3(ADAM9):c.411-8A>GPathogenic
812214NM_003816.3(ADAM9):c.1455C>A (p.Tyr485Ter)Pathogenic
862925NM_003816.3(ADAM9):c.1968T>A (p.Cys656Ter)Pathogenic
915360NM_003816.3(ADAM9):c.639T>G (p.Tyr213Ter)Pathogenic
1065690NM_003816.3(ADAM9):c.576del (p.Glu193fs)Likely pathogenic
2013020NM_003816.3(ADAM9):c.254+1G>ALikely pathogenic
2034457NM_003816.3(ADAM9):c.744+1G>ALikely pathogenic
3242299GRCh37/hg19 8p11.22(chr8:38933032-38935086)x1Likely pathogenic
3248895NM_003816.3:c.(672+1_673-1)_(914+1_915-1)delLikely pathogenic
3341288NM_003816.3(ADAM9):c.1698-1715_1881+156delLikely pathogenic
3382263NM_003816.3(ADAM9):c.103C>T (p.Gln35Ter)Likely pathogenic

SpliceAI

3516 predictions. Top by Δscore:

VariantEffectΔscore
8:39007881:TGTA:Tacceptor_loss1.0000
8:39007882:GTAG:Gacceptor_loss1.0000
8:39007883:TA:Tacceptor_loss1.0000
8:39007884:A:AGacceptor_gain1.0000
8:39007884:A:Cacceptor_loss1.0000
8:39007884:AG:Aacceptor_gain1.0000
8:39007885:G:GAacceptor_gain1.0000
8:39007885:GG:Gacceptor_gain1.0000
8:39007885:GGCT:Gacceptor_gain1.0000
8:39007979:AACAA:Adonor_gain1.0000
8:39007980:ACAA:Adonor_gain1.0000
8:39007981:CAA:Cdonor_gain1.0000
8:39007982:AA:Adonor_gain1.0000
8:39007983:AG:Adonor_loss1.0000
8:39007984:G:GGdonor_gain1.0000
8:39007985:TAAG:Tdonor_loss1.0000
8:39011717:G:GGdonor_gain1.0000
8:39013960:TCCA:Tacceptor_loss1.0000
8:39013963:A:AGacceptor_gain1.0000
8:39013964:G:GGacceptor_gain1.0000
8:39013964:GA:Gacceptor_gain1.0000
8:39013964:GAGA:Gacceptor_gain1.0000
8:39013964:GAGAC:Gacceptor_gain1.0000
8:39014043:GGTAA:Gdonor_loss1.0000
8:39014044:G:GGdonor_gain1.0000
8:39014044:GTA:Gdonor_loss1.0000
8:39014045:T:Adonor_loss1.0000
8:39017188:A:AGacceptor_gain1.0000
8:39017190:A:AGacceptor_gain1.0000
8:39017190:AATTT:Aacceptor_gain1.0000

AlphaMissense

5385 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
8:39025852:T:AC322S1.000
8:39025853:G:AC322Y1.000
8:39025853:G:CC322S1.000
8:39026719:C:GH347D1.000
8:39026731:C:GH351D1.000
8:39026733:T:AH351Q1.000
8:39026733:T:GH351Q1.000
8:39041960:T:GF382C1.000
8:39055751:T:AC524S1.000
8:39055751:T:CC524R1.000
8:39055752:G:CC524S1.000
8:39055753:T:GC524W1.000
8:39077238:T:AC570S1.000
8:39077239:G:CC570S1.000
8:39077253:T:AC575S1.000
8:39077253:T:CC575R1.000
8:39077254:G:CC575S1.000
8:39023274:G:CR288P0.999
8:39025829:G:AG314E0.999
8:39025837:T:CF317L0.999
8:39025839:T:AF317L0.999
8:39025839:T:GF317L0.999
8:39025852:T:CC322R0.999
8:39025853:G:TC322F0.999
8:39025854:T:GC322W0.999
8:39025871:G:AG328D0.999
8:39026717:C:AA346D0.999
8:39026719:C:AH347N0.999
8:39026721:T:AH347Q0.999
8:39026721:T:GH347Q0.999

dbSNP variants (sampled 300 via entrez): RS1000007634 (8:39034243 A>G), RS1000037804 (8:39043965 G>A), RS1000075484 (8:39027502 G>C), RS1000093763 (8:39037097 C>T), RS1000120761 (8:39012196 C>T), RS1000152181 (8:39094300 T>C), RS1000159195 (8:39008517 T>C), RS1000192352 (8:39050830 G>T), RS1000245064 (8:39081848 A>C,G), RS1000247532 (8:39044929 T>C,G), RS1000260842 (8:39050734 G>C), RS1000313450 (8:39001959 C>T), RS1000316031 (8:39102860 A>T), RS1000325868 (8:39045464 G>A,C), RS1000326716 (8:39096340 A>T)

Disease associations

OMIM: gene MIM:602713 | disease phenotypes: MIM:612775, MIM:120970, MIM:615033, MIM:268000

GenCC curated gene-disease

DiseaseClassificationInheritance
cone-rod dystrophy 9DefinitiveAutosomal recessive
cone-rod dystrophySupportiveAutosomal dominant

ClinGen Gene-Disease Validity (1)

Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.

DiseaseClassificationInheritance
ADAM9-related retinopathyDefinitiveAR

Mondo (5): inherited retinal dystrophy (MONDO:0019118), cone-rod dystrophy 9 (MONDO:0013002), cone-rod dystrophy (MONDO:0015993), hereditary spastic paraplegia 54 (MONDO:0014018), retinitis pigmentosa (MONDO:0019200)

Orphanet (4): OBSOLETE: Inherited retinal disorder (Orphanet:71862), Cone rod dystrophy (Orphanet:1872), Autosomal recessive spastic paraplegia type 54 (Orphanet:320380), Retinitis pigmentosa (Orphanet:791)

HPO phenotypes

17 total (18 of 17 shown, HPO-id order):

HPOTerm
HP:0000007Autosomal recessive inheritance
HP:0000505Visual impairment
HP:0000529Progressive visual loss
HP:0000543Optic disc pallor
HP:0000548Cone/cone-rod dystrophy
HP:0000551Color vision defect
HP:0000603Central scotoma
HP:0000613Photophobia
HP:0000639Nystagmus
HP:0000662Nyctalopia
HP:0001105Retinal atrophy
HP:0007641Dyschromatopsia
HP:0007703Abnormal retinal pigmentation
HP:0007737Spicular pigmentation of the retina
HP:0007843Attenuation of retinal blood vessels
HP:0012508Metamorphopsia
HP:0030466Abnormal full-field electroretinogram
HP:0000556Retinal dystrophy

GWAS associations

1 associations (top):

StudyTraitp-value
GCST90002379_117Basophil count1.000000e-09

EFO canonical traits (1, from GWAS)

EFO IDTrait name
EFO:0005090basophil count

MeSH disease descriptors (3)

DescriptorNameTree numbers
D000071700Cone-Rod DystrophiesC11.270.152; C11.768.585.658.250; C16.320.290.152
D058499Retinal DystrophiesC11.768.585.658
D012174Retinitis PigmentosaC11.270.684; C11.768.585.658.500; C16.320.290.684

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL5982 (SINGLE PROTEIN)

Molecules with ChEMBL bioactivity

3 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 38,415 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

MoleculeNamePhasePatents
CHEMBL19611ILOMASTAT212,065
CHEMBL206815APRATASTAT2256
CHEMBL296588PEPSTATIN226,094

PharmGKB: 1 entry (VIP=true, CPIC=false)

GtoPdb / IUPHAR curated pharmacology

(IUPHAR/BPS Guide to Pharmacology — expert-curated)

Target class: enzyme — M12: Astacin/Adamalysin

Most potent curated ligand interactions (1 total), top 1:

LigandActionAffinityParameter
ilomastatInhibition9.0pIC50

Binding affinities (BindingDB)

13 measured of 19 human assays (19 total across all organisms); most potent 13 below. Values come from heterogeneous assays and are not directly comparable.

LigandMeasureValuePatent
(2S)-N-hydroxy-3-[[4-[(2-methylquinolin-4-yl)methoxy]phenyl]sulfonylamino]-2-(4-methylsulfonylpiperazin-1-yl)propanamideIC5021 nMUS-8633196: Benzenesulfonamide compounds, method for synthesizing same, and use thereof in medicine as well as in cosmetics
(2S)-N-hydroxy-3-[[4-[(2-methylquinolin-4-yl)methoxy]phenyl]sulfonylamino]-2-(4-propan-2-ylsulfonylpiperazin-1-yl)propanamideIC5033 nMUS-8633196: Benzenesulfonamide compounds, method for synthesizing same, and use thereof in medicine as well as in cosmetics
(2S)-2-(4-ethylpiperazin-1-yl)-N-hydroxy-3-[[4-[(2-methylquinolin-4-yl)methoxy]phenyl]sulfonylamino]propanamideIC5041 nMUS-8633196: Benzenesulfonamide compounds, method for synthesizing same, and use thereof in medicine as well as in cosmetics
(2S)-N-hydroxy-2-[4-(2-methylpropanoyl)piperazin-1-yl]-3-[[4-[(2-methylquinolin-4-yl)methoxy]phenyl]sulfonylamino]propanamideIC5053 nMUS-8633196: Benzenesulfonamide compounds, method for synthesizing same, and use thereof in medicine as well as in cosmetics
(2S)-N-hydroxy-2-[4-[(4-methylphenyl)methyl]piperazin-1-yl]-3-[[4-[(2-methylquinolin-4-yl)methoxy]phenyl]sulfonylamino]propanamideIC5063 nMUS-8633196: Benzenesulfonamide compounds, method for synthesizing same, and use thereof in medicine as well as in cosmetics
(2S)-2-[4-[(4-fluorophenyl)methyl]piperazin-1-yl]-N-hydroxy-3-[[4-[(2-methylquinolin-4-yl)methoxy]phenyl]sulfonylamino]propanamideIC5067 nMUS-8633196: Benzenesulfonamide compounds, method for synthesizing same, and use thereof in medicine as well as in cosmetics
N-hydroxy-4-[4-(4-hydroxybut-2-ynoxy)phenyl]sulfonyl-2,2-dimethylthiomorpholine-3-carboxamideIC5071 nMUS-9115102: N-[2-hydroxycarbamoyl-2-(piperazinyl) ethyl] benzamide compounds, their preparation and their use as TACE inhibitors
(S)-N-hydroxy-4-(4-(4-hydroxybut-2-ynyloxy)phenylsulfonyl)-2,2-dimethylthiomorpholine-3-carboxamideIC5071 nMUS-9266848: 4-alkoxy-N-(2-hydroxycarbamoyl-2-piperidinyl-ethyl)-benzamide compounds as selective TACE-inhibitors for the treatment of inflammatory diseases
(2S)-N-hydroxy-2-[4-(2-methylpropylsulfonyl)piperazin-1-yl]-3-[[4-[(2-methylquinolin-4-yl)methoxy]phenyl]sulfonylamino]propanamideIC5086 nMUS-8633196: Benzenesulfonamide compounds, method for synthesizing same, and use thereof in medicine as well as in cosmetics
4-but-2-ynoxy-N-[(2S)-3-(hydroxyamino)-2-(4-methylsulfonylpiperazin-1-yl)-3-oxopropyl]benzamideIC50942 nMUS-9115102: N-[2-hydroxycarbamoyl-2-(piperazinyl) ethyl] benzamide compounds, their preparation and their use as TACE inhibitors
N-[(2S)-3-(hydroxyamino)-3-oxo-2-piperidin-1-ylpropyl]-4-(pyridin-4-ylmethoxy)benzamideIC503090 nMUS-9266848: 4-alkoxy-N-(2-hydroxycarbamoyl-2-piperidinyl-ethyl)-benzamide compounds as selective TACE-inhibitors for the treatment of inflammatory diseases
N-[(2S)-3-(hydroxyamino)-2-(4-methylsulfonylpiperazin-1-yl)-3-oxopropyl]-4-[(2-methylquinolin-4-yl)methoxy]benzamideIC505800 nMUS-9115102: N-[2-hydroxycarbamoyl-2-(piperazinyl) ethyl] benzamide compounds, their preparation and their use as TACE inhibitors
N-[(2S)-3-(hydroxyamino)-3-oxo-2-piperidin-1-ylpropyl]-4-[(2-methylquinolin-4-yl)methoxy]benzamideIC506400 nMUS-9266848: 4-alkoxy-N-(2-hydroxycarbamoyl-2-piperidinyl-ethyl)-benzamide compounds as selective TACE-inhibitors for the treatment of inflammatory diseases

ChEMBL bioactivities

46 potent at pChembl≥5 of 48 total, top 45 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
9.00IC501nMILOMASTAT
7.25IC5056.3nMPEPSTATIN
7.25IC5056.3nMILOMASTAT
7.16IC5070nMCHEMBL170315
7.16IC5070nMCHEMBL353536
7.07IC5085nMCHEMBL3392650
7.07IC5085nMAPRATASTAT
7.05IC5090nMCHEMBL4215407
6.75IC50180nMCHEMBL173027
6.72IC50190nMCHEMBL171962
6.64IC50230nMCHEMBL366478
6.58IC50260nMCHEMBL355797
6.52IC50300nMCHEMBL172885
6.43IC50370nMCHEMBL172548
6.37IC50430nMCHEMBL173235
6.32IC50480nMCHEMBL4208519
6.29IC50510nMCHEMBL368857
6.28IC50520nMCHEMBL173316
6.25IC50560nMCHEMBL177072
6.18IC50660nMCHEMBL436049
6.18IC50660nMCHEMBL173686
6.16IC50700nMCHEMBL175164
6.10IC50800nMCHEMBL172249
6.09IC50810nMCHEMBL368205
6.08IC50830nMCHEMBL172415
6.05IC50890nMCHEMBL367710
6.04IC50910nMCHEMBL172722
5.97IC501060nMCHEMBL173326
5.94IC501140nMCHEMBL171292
5.87IC501340nMCHEMBL173846
5.80IC501600nMCHEMBL170429
5.78IC501670nMCHEMBL425316
5.72IC501890nMCHEMBL172886
5.71IC501960nMCHEMBL539171
5.66Ki2200nMCHEMBL497985
5.65IC502240nMCHEMBL173744
5.58IC502600nMCHEMBL171986
5.51IC503110nMCHEMBL174315
5.51IC503054nMCHEMBL3648903
5.49IC503251nMCHEMBL3704903
5.45IC503560nMCHEMBL173754
5.07IC508448nMCHEMBL4873384
5.03IC509254nMCHEMBL3648902
5.00IC501e+04nMGRASSYSTATIN A
5.00Ki1e+04nMCHEMBL1078396

PubChem BioAssay actives

40 with measured affinity, of 62 total; 39 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
(2R)-N’-hydroxy-N-[(2S)-3-(1H-indol-3-yl)-1-(methylamino)-1-oxopropan-2-yl]-2-(2-methylpropyl)butanediamide241656: In vitro inhibition of A disintegrin and metalloprotease domain 9 (ADAM9)ic500.0010uM
(3S,4S)-3-hydroxy-4-[[(2S)-2-[[(3S,4S)-3-hydroxy-6-methyl-4-[[(2S)-3-methyl-2-[[(2S)-3-methyl-2-(3-methylbutanoylamino)butanoyl]amino]butanoyl]amino]heptanoyl]amino]propanoyl]amino]-6-methylheptanoic acid448178: Inhibition of ADAM9ic500.0563uM
N-hydroxy-2-[methoxy-(4-methoxyphenyl)phosphoryl]-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.0700uM
2-[ethoxy-[4-(2-ethoxyethoxy)phenyl]phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.0700uM
N-hydroxy-3-[methyl-[4-[(2-methylquinolin-4-yl)methoxy]phenyl]sulfonylamino]-1-(2-methylpropanoyl)azetidine-3-carboxamide1371964: Inhibition of ADAM9 (unknown origin)ic500.0900uM
N-hydroxy-2-[(4-methoxyphenyl)-(2-pyridin-2-ylethoxy)phosphoryl]-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.1800uM
7-amino-2-[ethoxy-(4-methoxyphenyl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.1900uM
2-[ethoxy-(4-methoxyphenyl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.2300uM
2-[ethoxy-(4-phenoxyphenyl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.2600uM
2-[ethoxy-(4-fluorophenyl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.3000uM
2-[ethoxy(phenyl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.3700uM
benzyl 4-[ethoxy-(4-methoxyphenyl)phosphoryl]-3-(hydroxycarbamoyl)piperazine-1-carboxylate66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.4300uM
N-hydroxy-1-(3-methylbutanoyl)-3-[methyl-[4-[(2-methylquinolin-4-yl)methoxy]phenyl]sulfonylamino]azetidine-3-carboxamide1371964: Inhibition of ADAM9 (unknown origin)ic500.4800uM
2-[2-ethoxyethoxy-(4-methoxyphenyl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.5100uM
5-[ethoxy-(4-methoxyphenyl)phosphoryl]-N-hydroxy-6,7-dihydro-4H-thieno[3,2-c]pyridine-6-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.5200uM
6-[ethoxy-(4-methoxyphenyl)phosphoryl]-N-hydroxy-7,8-dihydro-5H-pyrido[3,4-b]pyrazine-7-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.5600uM
2-[ethoxy-(4-pyridin-4-yloxyphenyl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.6600uM
2-[(4-aminophenyl)-ethoxyphosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.6600uM
2-[ethoxy(2-phenylethyl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.7000uM
2-[ethoxy-(4-methoxyphenyl)phosphoryl]-N-hydroxy-1,3,4,9-tetrahydropyrido[3,4-b]indole-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.8000uM
2-[butoxy-(4-methoxyphenyl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.8100uM
2-[ethoxy-(3-fluorophenyl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.8300uM
2-[ethoxy(thiophen-2-yl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.8900uM
2-[ethoxy-[(E)-2-phenylethenyl]phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic500.9100uM
2-[ethoxy-(2-fluorophenyl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic501.0600uM
2-[2-(diethylamino)ethoxy-(4-methoxyphenyl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic501.1400uM
2-[cyclohexylmethoxy-(4-methoxyphenyl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic501.3400uM
2-[hexoxy-(4-methoxyphenyl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic501.6000uM
2-[[4-(4-aminophenoxy)phenyl]-ethoxyphosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic501.6700uM
2-[ethoxy-(4-methylphenyl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic501.8900uM
2-[ethoxy-(4-phenylphenyl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic501.9600uM
(6S,7S)-N-hydroxy-5-methyl-6-[4-[5-(trifluoromethyl)-2-pyridinyl]piperazine-1-carbonyl]-5-azaspiro[2.5]octane-7-carboxamide1356429: Inhibition of recombinant human C-terminal His10-tagged ADAM9 (Ala206 to Asp697 residues) expressed in mouse cells using McaPLAQAV-Dpa-RSSSR-NH2 as substrate by fluorescence spectrophotometric methodki2.2000uM
N-hydroxy-2-[(4-methoxyphenyl)-propan-2-yloxyphosphoryl]-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic502.2400uM
2-[ethoxy(pyridin-4-yl)phosphoryl]-N-hydroxy-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic502.6000uM
N-hydroxy-2-[(4-methoxyphenyl)-(2-phenylethoxy)phosphoryl]-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic503.1100uM
N-hydroxy-2-[(4-methoxyphenyl)-[2-(4-phenylphenyl)ethoxy]phosphoryl]-3,4-dihydro-1H-isoquinoline-3-carboxamide66433: Inhibition of the heparin binding epidermal growth factor (HB-EGF) release from fibrosarcoma HT1080 transfectants expressing alkaline phosphate (AP) tagged HB-EGF stimulated by 12-O-tetradecanoylphorbol 13-acetate(TPA).ic503.5600uM
(5R)-5-[3-[4-(3,5-dichlorophenyl)piperazin-1-yl]-3-oxopropyl]imidazolidine-2,4-dione1775686: Inhibition of ADAM-9 (unknown origin)ic508.4480uM
5-[(5-methoxy-3-oxo-1H-indazol-2-yl)methyl]-5-methylimidazolidine-2,4-dione464407: Inhibition of ADAM9ki10.0000uM
methyl (2S)-1-[(2R)-2-[[(2S)-2-[[(2S,3R)-2-[[(3S,4S)-4-[[(2S)-4-amino-2-[[(2S)-2-[[(2R)-2-[(2S)-2-[(2S)-2-(dimethylamino)-3-methylbutanoyl]oxy-3-methylbutanoyl]oxy-3-methylbutanoyl]amino]-4-methylpentanoyl]amino]-4-oxobutanoyl]amino]-3-hydroxy-6-methylheptanoyl]amino]-3-hydroxybutanoyl]amino]propanoyl]-methylamino]-3-phenylpropanoyl]pyrrolidine-2-carboxylate448855: Inhibition of ADAM9 after 10 to 15 mins by fluorescence assayic5010.0000uM

CTD chemical–gene interactions

63 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Hydrogen Peroxidedecreases reaction, increases expression, affects expression3
mercuric bromideaffects cotreatment, increases expression2
Resveratrolaffects cotreatment, increases expression2
Leadaffects expression, decreases expression2
Phenylmercuric Acetateaffects cotreatment, increases expression2
Dihydrotestosteroneincreases expression, decreases reaction, affects reaction2
Tobacco Smoke Pollutionaffects expression, increases expression2
Tretinoinaffects localization, increases expression2
Valproic Acidincreases expression2
tert-Butylhydroperoxidedecreases reaction, increases expression, affects cotreatment, affects expression2
aristolochic acid Idecreases expression1
FR900359affects phosphorylation1
methylmercuric chlorideincreases expression1
triphenyl phosphateaffects expression1
bisphenol Aaffects expression1
sodium arsenateincreases expression1
sodium arsenitedecreases expression1
sulindac sulfidedecreases expression1
benazol Paffects expression1
aluminum sulfatedecreases expression1
ebselendecreases reaction, increases expression1
bicalutamideincreases expression, decreases reaction1
di-n-butylphosphoric acidaffects expression1
perfluorooctane sulfonic aciddecreases expression1
K 7174increases expression1
4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamideaffects cotreatment, increases expression1
dorsomorphinaffects cotreatment, increases expression1
Rosiglitazoneaffects cotreatment, increases expression, decreases reaction1
Pioglitazonedecreases reaction, increases expression1
Fulvestrantincreases methylation1

ChEMBL screening assays

19 unique, capped per target: 18 binding, 1 admet

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL1039217BindingInhibition of ADAM9 assessed as residual activity at 10 uM after 10 to 15 mins by fluorescence assay relative to controlGrassystatins A-C from marine cyanobacteria, potent cathepsin E inhibitors that reduce antigen presentation. — J Med Chem
CHEMBL4186131ADMETInhibition of ADAM9 (unknown origin)Discovery and process development of a novel TACE inhibitor for the topical treatment of psoriasis. — Bioorg Med Chem

Cellosaurus cell lines

9 cell lines: 6 cancer cell line, 2 transformed cell line, 1 spontaneously immortalized cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_B1J0Abcam HeLa ADAM9 KOCancer cell lineFemale
CVCL_D7JLUbigene A-549 ADAM9 KOCancer cell lineMale
CVCL_D8YQUbigene HEK293 ADAM9 KOTransformed cell lineFemale
CVCL_E6P0Genomeditech CHO-K1 H_ADAM9Spontaneously immortalized cell lineFemale
CVCL_E6TBGenomeditech HEK-293 H_ADAM9Transformed cell lineFemale
CVCL_SB49HAP1 ADAM9 (-) 1Cancer cell lineMale
CVCL_SB50HAP1 ADAM9 (-) 2Cancer cell lineMale
CVCL_SB51HAP1 ADAM9 (-) 3Cancer cell lineMale
CVCL_SB52HAP1 ADAM9 (-) 4Cancer cell lineMale

Clinical trials (associated diseases)

263 trials via MONDO — disease-level, not drug-specific.

TrialPhaseStatusTitle
NCT00717080PHASE4COMPLETEDThe Role of Capsular Tension Ring (CTR) in Anterior Capsular Contraction
NCT04224207PHASE3COMPLETEDManagement of Retinitis Pigmentosa by Mesenchymal Stem Cells by Wharton’s Jelly Derived Mesenchymal Stem Cells
NCT07082855PHASE3NOT_YET_RECRUITINGA Multicenter, Randomized, Double-Blind, Controlled Clinical Study of Minocycline for the Treatment of Retinitis Pigmentosa
NCT00000114PHASE3COMPLETEDRandomized Trial of Vitamin A and Vitamin E Supplementation for Retinitis Pigmentosa
NCT00000116PHASE3COMPLETEDRandomized Trial of DHA for Retinitis Pigmentosa Patients Receiving Vitamin A
NCT00346333PHASE3COMPLETEDClinical Trial of Lutein for Patients With Retinitis Pigmentosa Receiving Vitamin A
NCT01786395PHASE3TERMINATEDPhase III Efficacy and Safety Clinical Study of UF-021 for Treatment of Retinitis Pigmentosa
NCT04636853PHASE3COMPLETEDCB-PRP in Retinitis Pigmentosa and Dry Age-related Macular Degeneration
NCT05537220PHASE3ACTIVE_NOT_RECRUITINGOral N-acetylcysteine for Retinitis Pigmentosa
NCT05800301PHASE3COMPLETEDManagement of Retinitis Pigmentosa Via Combination of Wharton’s Jelly-derived Mesenchymal Stem Cells and Magnovision
NCT05926583PHASE3ACTIVE_NOT_RECRUITINGA Study of AAV5-hRKp.RPGR for the Treatment of Japanese Participants With X-linked Retinitis Pigmentosa
NCT06388200PHASE3ACTIVE_NOT_RECRUITINGA Phase 3 Study Of OCU400 Gene Therapy for the Treatment Of Retinitis Pigmentosa
NCT07290530PHASE3NOT_YET_RECRUITING24-Month Trial of NPI-001 for the Preservation of Photoreceptors in Retinitis Pigmentosa Associated With Usher Syndrome
NCT01773278PHASE2RECRUITINGCholesterol and Antioxidant Treatment in Patients With Smith-Lemli-Opitz Syndrome (SLOS)
NCT03763227PHASE2COMPLETEDIntravitreal Ranibizumab (Lucentis®) in the Treatment of Non-leaking Macular Cysts in Retinal Dystrophy
NCT04068207PHASE2COMPLETEDMinocycline Treatment in Retinitis Pigmentosa
NCT04945772PHASE2COMPLETEDEfficacy and Safety of MCO-010 Optogenetic Therapy in Adults With Retinitis Pigmentosa [RESTORE]
NCT00100230PHASE2COMPLETEDDHA and X-Linked Retinitis Pigmentosa
NCT00447980PHASE2COMPLETEDA Study of Encapsulated Cell Technology (ECT) Implant for Participants With Early Stage Retinitis Pigmentosa
NCT00447993PHASE2COMPLETEDA Study of Encapsulated Cell Technology (ECT) Implant for Patients With Late Stage Retinitis Pigmentosa
NCT01233609PHASE2COMPLETEDTrial of Oral Valproic Acid for Retinitis Pigmentosa
NCT01399515PHASE2COMPLETEDEfficacy and Safety of Oral Valproic Acid for Retinitis Pigmentosa
NCT01530659PHASE2COMPLETEDRetinal Imaging in CNTF -Releasing Encapsulated Cell Implant Treated Patients for Early-stage Retinitis Pigmentosa
NCT01560715PHASE2COMPLETEDAutologous Bone Marrow-Derived Stem Cells Transplantation For Retinitis Pigmentosa
NCT02609165PHASE2COMPLETEDNerve Growth Factor Eye Drops Treatment in Patients With Retinitis Pigmentosa and Cystoid Macular Edema
NCT02661711PHASE2COMPLETEDAflibercept for Macular Oedema With Underlying Retinitis Pigmentosa (AMOUR) Study
NCT02804360PHASE2UNKNOWNIntravitreal Dexamethasone Implant in Retinitis Pigmentosa-related Macular Edema- a Retrospective Study
NCT02837640PHASE2UNKNOWNStudying a Potential Protective Effect of L-Dopa on Retinitis Pigmentosa
NCT03073733PHASE2COMPLETEDSafety and Efficacy of Intravitreal Injection of Human Retinal Progenitor Cells in Adults With Retinitis Pigmentosa
NCT04356716PHASE2COMPLETEDSildenafil for Treatment of Choroidal Ischemia
NCT04604899PHASE2COMPLETEDSafety of Repeat Intravitreal Injection of Human Retinal Progenitor Cells (jCell) in Adult Subjects With Retinitis Pigmentosa
NCT04763369PHASE2UNKNOWNInvestigation of Therapeutic Efficacy and Safety of UMSCs for the Management of Retinitis Pigmentosa (RP)
NCT04864496PHASE2UNKNOWNEffects of Treatment With N- Acetylcysteine on Visual Outcomes in Patients With Retinitis Pigmentosa
NCT05085964PHASE2TERMINATEDAn Open-Label Extension Study to Evaluate Safety & Tolerability of QR-421a in Subjects With Retinitis Pigmentosa
NCT05392179PHASE2COMPLETEDA Study in Subjects With Retinitis Pigmentosa
NCT06627179PHASE2RECRUITINGStudy to Evaluate Ultevursen in Subjects With Retinitis Pigmentosa (RP) Due to Mutations in Exon 13 of the USH2A Gene
NCT06628947PHASE2RECRUITINGA Phase II Study of Intravitreal KIO-301 in Patients With Late-stage Retinitis Pigmentosa
NCT06912633PHASE2RECRUITINGSafety of a Single, Intravitreal Injection of 6.0M jCell (Famzeretcel) in Retinitis Pigmentosa (RP)
NCT05902962PHASE1COMPLETEDSAD of IVT VP-001 in PRPF31 Mutation-Associated Retinal Dystrophy Subjects
NCT06319872PHASE1RECRUITINGThe Effects of Disulfiram (Antabuse®) on Visual Acuity in Patients With Retinal Degeneration