ADAMTS8
gene geneOn this page
Also known as METH2FLJ41712ADAM-TS8
Summary
ADAMTS8 (ADAM metallopeptidase with thrombospondin type 1 motif 8, HGNC:224) is a protein-coding gene on chromosome 11q24.3, encoding A disintegrin and metalloproteinase with thrombospondin motifs 8 (Q9UP79). Has anti-angiogenic properties.
This gene encodes a member of the ADAMTS (a disintegrin and metalloproteinase with thrombospondin motifs) protein family. Members of the family share several distinct protein modules, including a propeptide region, a metalloproteinase domain, a disintegrin-like domain, and a thrombospondin type 1 (TS) motif. Individual members of this family differ in the number of C-terminal TS motifs, and some have unique C-terminal domains. The encoded preproprotein is proteolytically processed to generate the mature enzyme. This enzyme contains two C-terminal TS motifs, and disrupts angiogenesis in vivo. A number of disorders have been mapped in the vicinity of this gene, most notably lung neoplasms. Reduced expression of this gene has been observed in multiple human cancers and this gene has been proposed as a potential tumor suppressor.
Source: NCBI Gene 11095 — RefSeq curated summary.
At a glance
- GWAS associations: 40 (top 3% of genes corpus-wide)
- Clinical variants (ClinVar): 173 total — 1 pathogenic
- Regional missense constraint (gnomAD): 1 of 5 regions constrained (≈2% of expected missense variation)
- GTEx eGene: eQTL in 23 tissues, sQTL in 3 (q < 0.05)
- Constraint (gnomAD): pLI 0.00 (LoF-tolerant), LOEUF 1.08 (unconstrained)
- MANE Select transcript:
NM_007037 - Notable: 173 clinical variants but no curated precision-oncology (CIViC) evidence yet
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:224 |
| Approved symbol | ADAMTS8 |
| Name | ADAM metallopeptidase with thrombospondin type 1 motif 8 |
| Location | 11q24.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | METH2, FLJ41712, ADAM-TS8 |
| Ensembl gene | ENSG00000134917 |
| Ensembl biotype | protein_coding |
| OMIM | 605175 |
| Entrez | 11095 |
Gene structure
Transcript identifiers
Ensembl transcripts: 14 — 12 protein_coding, 1 retained_intron, 1 nonsense_mediated_decay
MANE Select: ENST00000257359
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 1, TSL 2: 1
ENST00000257359, ENST00000531752, ENST00000875535, ENST00000912959, ENST00000912960, ENST00000912961, ENST00000912962, ENST00000912963, ENST00001028465, ENST00001071611, ENST00001105712, ENST00001116165, ENST00001116166, ENST00001142150
RefSeq mRNA: 1 — MANE Select: NM_007037
NM_007037
CCDS: CCDS41732
Canonical transcript exons
ENST00000257359 — 9 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000749792 | 130416163 | 130416330 |
| ENSE00000749793 | 130416940 | 130417075 |
| ENSE00000990547 | 130419053 | 130419292 |
| ENSE00000990549 | 130411417 | 130411600 |
| ENSE00001001443 | 130427567 | 130428609 |
| ENSE00001001447 | 130414531 | 130414832 |
| ENSE00003475319 | 130408464 | 130408639 |
| ENSE00003536668 | 130404923 | 130406128 |
| ENSE00003545213 | 130408768 | 130408940 |
Expression profiles
Bgee: expression breadth ubiquitous, 197 present calls, max score 93.16.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1057 / max 14.3536, expressed in 52 samples.
Highest expression (Bgee): middle temporal gyrus, upper lobe of left lung, upper lobe of lung, endothelial cell, lower lobe of lung.
Genetic regulation across tissues (GTEx eQTL / sQTL)
ADAMTS8 is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 23 tissues and its splicing (sQTL) in 3 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
showing 20 of 26 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Brain Spinal cord cervical c-1 | eqtl | 4.0e-15 | +1.79 | 11:130429850:C:T |
| Brain Caudate basal ganglia | eqtl | 1.1e-13 | -0.40 | 11:130892162:G:A |
| Brain Putamen basal ganglia | eqtl | 1.3e-09 | -0.35 | 11:130890099:T:C |
| Adipose Visceral Omentum | eqtl | 1.2e-07 | +0.23 | 11:130400960:T:C |
| Artery Aorta | eqtl | 2.7e-07 | +0.21 | 11:130398252:G:C |
| Testis | eqtl | 3.9e-06 | -0.31 | 11:130401783:T:G |
| Brain Nucleus accumbens basal ganglia | eqtl | 1.1e-05 | -0.23 | 11:130890599:A:T |
| Brain Hippocampus | eqtl | 5.9e-05 | +0.98 | 11:130458972:C:T |
| Brain Frontal Cortex BA9 | eqtl | 9.2e-05 | -0.19 | 11:130431884:TAGAA:T |
| Pituitary | eqtl | 1.5e-04 | -0.31 | 11:130409029:T:G |
| Lung | eqtl | 2.3e-04 | -0.13 | 11:130423999:G:A |
| Lung | sqtl | 5.6e-04 | +0.31 | 11:130393052:C:T |
| Artery Tibial | eqtl | 5.7e-04 | -0.12 | 11:130403335:A:T |
| Brain Cortex | eqtl | 7.0e-04 | -0.18 | 11:130406384:G:C |
| Brain Hypothalamus | eqtl | 8.3e-04 | -0.31 | 11:130435710:A:G |
| Esophagus Muscularis | eqtl | 2.7e-03 | +0.16 | 11:130909773:T:C |
| Colon Transverse | sqtl | 7.1e-03 | -0.98 | 11:129754941:T:C |
| Esophagus Mucosa | eqtl | 9.0e-03 | +0.14 | 11:130896205:G:T |
| Brain Substantia nigra | eqtl | 9.5e-03 | +1.23 | 11:130458972:C:T |
| Adipose Subcutaneous | eqtl | 1.3e-02 | +0.21 | 11:130393052:C:T |
FANTOM5 promoters
2 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 123172 | 0.0658 | 32 |
| 123173 | 0.0400 | 17 |
Top tissues by expression
showing 100 of 271 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| middle temporal gyrus | UBERON:0002771 | 93.16 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 92.71 | gold quality |
| upper lobe of lung | UBERON:0008948 | 91.91 | gold quality |
| endothelial cell | CL:0000115 | 91.56 | gold quality |
| lower lobe of lung | UBERON:0008949 | 90.91 | gold quality |
| right lung | UBERON:0002167 | 88.79 | gold quality |
| lung | UBERON:0002048 | 87.07 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 85.89 | gold quality |
| Brodmann (1909) area 23 | UBERON:0013554 | 84.70 | gold quality |
| entorhinal cortex | UBERON:0002728 | 83.54 | gold quality |
| lower esophagus | UBERON:0013473 | 83.23 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 83.22 | gold quality |
| cauda epididymis | UBERON:0004360 | 82.95 | gold quality |
| right coronary artery | UBERON:0001625 | 82.61 | gold quality |
| visceral pleura | UBERON:0002401 | 82.33 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 82.33 | gold quality |
| ascending aorta | UBERON:0001496 | 81.91 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 81.88 | gold quality |
| thoracic aorta | UBERON:0001515 | 81.53 | gold quality |
| prefrontal cortex | UBERON:0000451 | 80.99 | gold quality |
| postcentral gyrus | UBERON:0002581 | 80.78 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 80.51 | gold quality |
| vermiform appendix | UBERON:0001154 | 80.38 | gold quality |
| frontal cortex | UBERON:0001870 | 79.70 | gold quality |
| blood vessel layer | UBERON:0004797 | 79.61 | gold quality |
| parietal lobe | UBERON:0001872 | 79.28 | gold quality |
| caecum | UBERON:0001153 | 79.07 | gold quality |
| caput epididymis | UBERON:0004358 | 78.76 | gold quality |
| right frontal lobe | UBERON:0002810 | 78.48 | gold quality |
| primary visual cortex | UBERON:0002436 | 78.20 | gold quality |
| neocortex | UBERON:0001950 | 77.85 | gold quality |
| coronary artery | UBERON:0001621 | 77.59 | gold quality |
| aorta | UBERON:0000947 | 77.37 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 77.32 | gold quality |
| left coronary artery | UBERON:0001626 | 77.10 | gold quality |
| cerebral cortex | UBERON:0000956 | 76.82 | gold quality |
| esophagus | UBERON:0001043 | 76.71 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 76.27 | gold quality |
| endometrium | UBERON:0001295 | 76.09 | gold quality |
| parotid gland | UBERON:0001831 | 76.02 | gold quality |
| telencephalon | UBERON:0001893 | 75.94 | gold quality |
| temporal lobe | UBERON:0001871 | 75.77 | gold quality |
| left uterine tube | UBERON:0001303 | 75.48 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 75.46 | gold quality |
| occipital lobe | UBERON:0002021 | 75.41 | gold quality |
| putamen | UBERON:0001874 | 75.38 | gold quality |
| vena cava | UBERON:0004087 | 75.22 | gold quality |
| nucleus accumbens | UBERON:0001882 | 75.21 | gold quality |
| caudate nucleus | UBERON:0001873 | 74.83 | gold quality |
| seminal vesicle | UBERON:0000998 | 74.68 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 74.55 | gold quality |
| cingulate cortex | UBERON:0003027 | 74.44 | gold quality |
| tibial artery | UBERON:0007610 | 74.26 | gold quality |
| corpus epididymis | UBERON:0004359 | 74.25 | gold quality |
| popliteal artery | UBERON:0002250 | 74.20 | gold quality |
| buccal mucosa cell | CL:0002336 | 74.14 | gold quality |
| medial globus pallidus | UBERON:0002477 | 73.91 | silver quality |
| cerebellar vermis | UBERON:0004720 | 73.83 | gold quality |
| adult organism | UBERON:0007023 | 73.74 | gold quality |
| prostate gland | UBERON:0002367 | 73.54 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 73.47 | silver quality |
| Ammon’s horn | UBERON:0001954 | 73.17 | gold quality |
| forebrain | UBERON:0001890 | 72.89 | gold quality |
| Brodmann (1909) area 46 | UBERON:0006483 | 72.58 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 72.50 | gold quality |
| globus pallidus | UBERON:0001875 | 72.45 | silver quality |
| fundus of stomach | UBERON:0001160 | 72.32 | gold quality |
| body of stomach | UBERON:0001161 | 72.32 | gold quality |
| nipple | UBERON:0002030 | 72.11 | gold quality |
| myometrium | UBERON:0001296 | 71.89 | gold quality |
| colon | UBERON:0001155 | 71.83 | gold quality |
| uterus | UBERON:0000995 | 71.71 | gold quality |
| urinary bladder | UBERON:0001255 | 71.54 | gold quality |
| esophagus mucosa | UBERON:0002469 | 71.53 | gold quality |
| large intestine | UBERON:0000059 | 71.44 | gold quality |
| mucosa of stomach | UBERON:0001199 | 71.22 | gold quality |
| decidua | UBERON:0002450 | 70.69 | silver quality |
| amygdala | UBERON:0001876 | 70.63 | gold quality |
| stomach | UBERON:0000945 | 70.50 | gold quality |
| brain | UBERON:0000955 | 69.94 | gold quality |
| gall bladder | UBERON:0002110 | 69.44 | gold quality |
| dorsal root ganglion | UBERON:0000044 | 69.41 | gold quality |
| intestine | UBERON:0000160 | 69.36 | gold quality |
| pleura | UBERON:0000977 | 69.33 | gold quality |
| tibial nerve | UBERON:0001323 | 69.18 | gold quality |
| right atrium auricular region | UBERON:0006631 | 69.01 | gold quality |
| transverse colon | UBERON:0001157 | 68.63 | gold quality |
| superficial temporal artery | UBERON:0001614 | 68.45 | gold quality |
| saphenous vein | UBERON:0007318 | 68.27 | silver quality |
| cardia of stomach | UBERON:0001162 | 68.17 | silver quality |
| body of uterus | UBERON:0009853 | 68.17 | gold quality |
| placenta | UBERON:0001987 | 67.80 | gold quality |
| cardiac atrium | UBERON:0002081 | 67.58 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 67.39 | gold quality |
| pharyngeal mucosa | UBERON:0000355 | 67.35 | gold quality |
| body of tongue | UBERON:0011876 | 67.33 | gold quality |
| pylorus | UBERON:0001166 | 67.06 | silver quality |
| pericardium | UBERON:0002407 | 66.83 | gold quality |
| urethra | UBERON:0000057 | 66.75 | gold quality |
| inferior vagus X ganglion | UBERON:0005363 | 66.65 | silver quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 3.79 |
HPA expression
RNA tissue specificity: Tissue enhanced
showing 60 of 69 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM | Protein (IHC) |
|---|---|---|---|
| Lung | tissue | 12.3 | not detected |
| Appendix | tissue | 9.5 | not detected |
| Nucleus accumbens | tissue | 9.0 | |
| Hippocampus | tissue | 6.7 | not detected |
| Cerebral cortex | tissue | 5.8 | low |
| Retrosplenial and cingulate cortex | tissue | 5.8 | |
| Prefrontal cortex | tissue | 5.7 | |
| Hippocampal formation | tissue | 5.7 | |
| Postcentral gyrus | tissue | 5.6 | |
| Insular cortex | tissue | 5.3 | |
| Motor cortex | tissue | 5.0 | |
| Amygdala | tissue | 4.8 | |
| Retrosplenial cortex | tissue | 4.8 | |
| Seminal vesicle | tissue | 4.6 | not detected |
| Temporal cortex | tissue | 4.5 | |
| Smooth muscle | tissue | 3.9 | not detected |
| Urinary bladder | tissue | 3.9 | low |
| Entorhinal cortex | tissue | 3.8 | |
| Locus coeruleus | tissue | 3.0 | |
| Esophagus | tissue | 2.8 | not detected |
| Olfactory bulb | tissue | 2.8 | |
| Somatosensory cortex | tissue | 2.6 | |
| Placenta | tissue | 2.5 | not detected |
| Frontal cortex | tissue | 2.0 | |
| Colon | tissue | 1.9 | low |
| Occipital cortex | tissue | 1.8 | |
| Adipose tissue | tissue | 1.7 | not detected |
| Gallbladder | tissue | 1.5 | not detected |
| Endometrium 1 | tissue | 1.4 | not detected |
| Spinal cord | tissue | 1.3 | |
| Prostate | tissue | 1.3 | not detected |
| Fallopian tube | tissue | 1.3 | not detected |
| Vagina | tissue | 1.1 | not detected |
| Duodenum | tissue | 1.1 | not detected |
| Septum | tissue | 1.1 | |
| Stomach 1 | tissue | 0.9 | not detected |
| Epididymis | tissue | 0.9 | not detected |
| Basal ganglia | tissue | 0.9 | not detected |
| Choroid plexus | tissue | 0.9 | |
| Ventral forebrain | tissue | 0.8 | |
| Cervix | tissue | 0.7 | not detected |
| Pons | tissue | 0.7 | |
| Pancreas | tissue | 0.7 | not detected |
| Thalamus | tissue | 0.7 | |
| Small intestine | tissue | 0.7 | not detected |
| Heart muscle | tissue | 0.6 | not detected |
| Midbrain | tissue | 0.6 | |
| Caudate putamen | tissue | 0.6 | |
| Breast | tissue | 0.5 | not detected |
| Rectum | tissue | 0.5 | not detected |
| Skeletal muscle | tissue | 0.5 | not detected |
| Hypothalamus | tissue | 0.5 | |
| Superior colliculi | tissue | 0.5 | |
| Substantia nigra | tissue | 0.5 | |
| Tongue | tissue | 0.4 | |
| Spleen | tissue | 0.4 | not detected |
| Ovary | tissue | 0.3 | not detected |
| Putamen | tissue | 0.3 | |
| Medulla oblongata | tissue | 0.3 | |
| Pituitary gland | tissue | 0.2 |
Brain sub-regions (HPA Brain Atlas): detected in 190; highest nTPM — Blood vessel (12.7), Olfactory area (12.5), Perirhinal gyrus (12.4), Lingual gyrus (11.5), Temporo-occipital transitional zone (11.1).
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
Targeting ADAMTS8 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).
showing 30 of 53 miRNAs:
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3134 | 100.00 | 66.43 | 777 |
| HSA-MIR-4500 | 99.99 | 72.72 | 2367 |
| HSA-LET-7A-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7B-5P | 99.98 | 72.31 | 1790 |
| HSA-LET-7C-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7E-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7F-5P | 99.98 | 72.56 | 1784 |
| HSA-LET-7G-5P | 99.98 | 72.37 | 1784 |
| HSA-LET-7I-5P | 99.98 | 72.37 | 1788 |
| HSA-MIR-98-5P | 99.98 | 72.33 | 1787 |
| HSA-MIR-5696 | 99.98 | 72.36 | 4487 |
| HSA-LET-7D-5P | 99.96 | 71.76 | 1632 |
| HSA-MIR-4458 | 99.96 | 71.64 | 1650 |
| HSA-MIR-141-3P | 99.94 | 72.79 | 2421 |
| HSA-MIR-200A-3P | 99.94 | 72.68 | 2420 |
| HSA-MIR-552-5P | 99.93 | 68.56 | 1583 |
| HSA-MIR-335-3P | 99.93 | 73.36 | 4958 |
| HSA-MIR-450B-5P | 99.92 | 71.48 | 3175 |
| HSA-MIR-3919 | 99.87 | 69.45 | 2489 |
| HSA-MIR-202-3P | 99.84 | 71.41 | 1290 |
| HSA-MIR-448 | 99.79 | 72.37 | 2103 |
| HSA-MIR-3680-3P | 99.75 | 72.51 | 3095 |
| HSA-MIR-3679-3P | 99.64 | 69.88 | 1599 |
| HSA-MIR-4756-3P | 99.62 | 66.30 | 1319 |
| HSA-MIR-1290 | 99.59 | 69.90 | 2079 |
| HSA-MIR-4677-3P | 99.49 | 67.91 | 1246 |
| HSA-MIR-4251 | 99.40 | 69.19 | 3363 |
| HSA-MIR-4316 | 99.37 | 65.75 | 1360 |
| HSA-MIR-4324 | 99.04 | 70.14 | 1569 |
| HSA-MIR-143-5P | 98.98 | 68.87 | 946 |
Functional genomics
gnomAD constraint: pLI 1.15e-15, LOEUF 1.08, missense Z -0.69 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD)
ENST00000257359 splits into 5 regions with different missense tolerance; 1 is missense-constrained (≈2% of the expected missense variation). Missense variants in a constrained region (low observed/expected) are more likely to be pathogenic. gnomAD
| Region (GRCh38) | Missense obs / exp | o/e | Constrained |
|---|---|---|---|
| 11:130,405,561–130,405,922 | 147 / 154.1 | 0.95 | no |
| 11:130,405,923–130,405,966 | 4 / 18.2 | 0.22 | yes (p 8.7e-04) |
| 11:130,405,967–130,411,575 | 290 / 297.8 | 0.97 | no |
| 11:130,411,576–130,414,570 | 10 / 27.4 | 0.37 | no |
| 11:130,414,571–130,428,286 | 741 / 710.6 | 1.04 | no |
Literature-anchored findings (GeneRIF, showing 17)
- Ability of ADAMTS-8 to cleave aggrecan at aggrecanase-susceptible Glu373-Ala374 peptide bond. Presence of ADAMTS-8 mRNA transcripts in normal and osteoarthritic human cartilage. (ADAMTS-8) (PMID:15296936)
- Downdownregulation of METH-2 expression in primary NSCLC, often associated with promoter hypermethylation, is a frequent event, which may be related to the development of the disease. (PMID:15328519)
- ADAMTS8 and ADAMTS15 have emerged as novel predictors of survival in patients with breast carcinoma (PMID:16152618)
- Immunohistochemistry and Western analysis indicated downregulation of ADAMTS-8 protein in >77% brain tumours. A role for ADAMTS-8 in brain tumorigenesis, warranting further investigation into its role in regulation of tumour angiogenesis. (PMID:16570050)
- ADAMTS-4 and -8 are inflammatory regulated enzymes expressed in macrophage-rich areas of atherosclerotic plaques (PMID:17606262)
- Study uncovers the tumor suppressive function of ADAMTS8 and its frequent methylation in certain tumors could be developed as a potential biomarker. (PMID:24184540)
- ADAMTS 8, CCL23, and TNFSF15 are implicated in anti-angiogenic activities (PMID:24384427)
- ADAMTS8 hypermethylation is associated with decreased expression in gastric cancer. (PMID:27493958)
- This study showed that ADAMTS1, 8, and 18 are highly expressed in GC and its nodal metastases, suggesting important roles of these proteases in carcinogenesis and lymphatic metastasis. The findings from the present study indicate that these proteases may be promising candidates for novel and alternative treatments in GC (gastric cancer) (PMID:28814085)
- Study revealed upregulation of ADAMTS8 and downregulation of FRAS1 and SOSTDC1 in primary fibroblasts from linear morphoea (LM) lesions. SOSTDC1 knock-down recapitulated the reduced TGF -beta1 responsiveness and LM fibroblast migration, while overexpression of ADAMTS 8 induced myofibroblast markers. (PMID:30367460)
- The expression level of ADAMTS8 mRNA increased 3.5 fold in Hip Degenerative Arthritis group when compared with Femoral neck fractures group. (PMID:30655094)
- ADAMTS8 is frequently down-regulated in colorectal cancer and functions as a tumor suppressor. (PMID:32033751)
- Post-translational regulation and proteolytic activity of the metalloproteinase ADAMTS8. (PMID:34687701)
- ADAMTS8 inhibited lung cancer progression through suppressing VEGFA. (PMID:35149432)
- The Prognostic Value of ADAMTS8 and Its Role as a Tumor Suppressor in Breast Cancer. (PMID:36346393)
- ADAMTS8 inhibits glioma development in vitro and in vivo. (PMID:37587889)
- HSFAS mediates fibroblast proliferation, migration, trans-differentiation and apoptosis in hypertrophic scars via interacting with ADAMTS8. (PMID:38006215)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | adamts8a | ENSDARG00000007709 |
| danio_rerio | ENSDARG00000058252 | |
| mus_musculus | Adamts8 | ENSMUSG00000031994 |
| rattus_norvegicus | Adamts8 | ENSRNOG00000005574 |
Paralogs (25): ADAMTS6 (ENSG00000049192), ADAMTS2 (ENSG00000087116), PAPLN (ENSG00000100767), ADAMTS7 (ENSG00000136378), ADAMTS14 (ENSG00000138316), ADAMTS17 (ENSG00000140470), ADAMTS18 (ENSG00000140873), ADAMTS10 (ENSG00000142303), ADAMTSL4 (ENSG00000143382), ADAMTS16 (ENSG00000145536), ADAMTS19 (ENSG00000145808), ADAMTS12 (ENSG00000151388), ADAMTS1 (ENSG00000154734), ADAMTS5 (ENSG00000154736), ADAMTS3 (ENSG00000156140), ADAMTSL3 (ENSG00000156218), ADAMTS4 (ENSG00000158859), ADAMTS13 (ENSG00000160323), ADAMTS9 (ENSG00000163638), ADAMTS15 (ENSG00000166106), ADAMTS20 (ENSG00000173157), ADAMTSL1 (ENSG00000178031), ADAMTSL5 (ENSG00000185761), THSD4 (ENSG00000187720), ADAMTSL2 (ENSG00000197859)
Additional cross-species homologs
Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.
| Organism | UniProt | Identity | Method |
|---|---|---|---|
| Pongo abelii | Q5RFQ8 | 98.7% | Diamond |
| Bos taurus | Q9TT92 | 98.1% | Diamond |
| Xenopus laevis | P35448 | 80.9% | Diamond |
| Gallus gallus | P35440 | 80.4% | Diamond |
| Oryctolagus cuniculus | P98136 | 75.9% | Diamond |
| Caenorhabditis elegans | O76840 | 58.8% | Diamond |
| Acropora millepora | B3EWY9 | 53.5% | Diamond |
| Drosophila melanogaster | Q868Z9 | 48.6% | Diamond |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| MIR8052 | ncRNA | 102466873 |
| ADAMTS15 | protein-coding | 170689 |
| ZBTB44 | protein-coding | 29068 |
| ZBTB44-DT | ncRNA | 646383 |
| APLP2 | protein-coding | 334 |
| ST14 | protein-coding | 6768 |
Protein
Protein identifiers
A disintegrin and metalloproteinase with thrombospondin motifs 8 — Q9UP79 (reviewed: Q9UP79)
Alternative names: METH-2, METH-8
All UniProt accessions (1): Q9UP79
UniProt curated annotations — full annotation on UniProt →
Function. Has anti-angiogenic properties.
Subcellular location. Secreted. Extracellular space. Extracellular matrix.
Tissue specificity. Highly expressed in adult and fetal lung, lower expression in brain, placenta, heart, stomach and fetal brain and kidney.
Post-translational modifications. The precursor is cleaved by a furin endopeptidase. Glycosylated. Can be O-fucosylated by POFUT2 on a serine or a threonine residue found within the consensus sequence C1-X(2)-(S/T)-C2-G of the TSP type-1 repeat domains where C1 and C2 are the first and second cysteine residue of the repeat, respectively. Fucosylated repeats can then be further glycosylated by the addition of a beta-1,3-glucose residue by the glucosyltransferase, B3GALTL. Fucosylation mediates the efficient secretion of ADAMTS family members. Can also be C-glycosylated with one or two mannose molecules on tryptophan residues within the consensus sequence W-X-X-W of the TPRs, and N-glycosylated. These other glycosylations can also facilitate secretion.
Cofactor. Binds 1 zinc ion per subunit.
Domain organisation. The spacer domain and the TSP type-1 domains are important for a tight interaction with the extracellular matrix.
RefSeq proteins (1): NP_008968* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000884 | TSP1_rpt | Repeat |
| IPR001590 | Peptidase_M12B | Domain |
| IPR002870 | Peptidase_M12B_N | Domain |
| IPR006586 | ADAM_Cys-rich | Domain |
| IPR010294 | ADAMTS_spacer1 | Domain |
| IPR013273 | ADAMTS/ADAMTS-like | Family |
| IPR013277 | Pept_M12B_ADAM-TS8 | Family |
| IPR024079 | MetalloPept_cat_dom_sf | Homologous_superfamily |
| IPR036383 | TSP1_rpt_sf | Homologous_superfamily |
| IPR041645 | ADAMTS_CR_2 | Domain |
| IPR045371 | ADAMTS_CR_3 | Domain |
| IPR050439 | ADAMTS_ADAMTS-like | Family |
Pfam: PF00090, PF01421, PF01562, PF05986, PF17771, PF19030, PF19236
UniProt features (37 total): disulfide bond 11, sequence conflict 6, glycosylation site 5, domain 4, binding site 3, compositionally biased region 2, region of interest 2, signal peptide 1, propeptide 1, active site 1, chain 1
Structure
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9UP79-F1 | 80.22 | 0.48 |
Human Protein Atlas
Protein class: Predicted secreted proteins, Plasma proteins, Cancer-related genes, Candidate cancer biomarkers, UniProt - Evidence at transcript level
Protein evidence: Evidence at protein level
Antibody reliability (HPA): IH approved
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1)
| Position | Role |
|---|---|
| 364 |
Ligand- & substrate-binding residues (3)
| Position | Role |
|---|---|
| 363 | Zn(2+) |
| 367 | Zn(2+) |
| 373 | Zn(2+) |
Disulfide bonds (11)
| Type | Positions |
|---|---|
| Disulfide bond | 294–347, 323–329, 341–424, 379–408, 452–477, 463–486, 472–507, 501–512, 538–575, 542–580, 553–565 |
Glycosylation sites (5)
| Type | Positions |
|---|---|
| N-linked (glcnac…) asparagine | 344, 400, 465, 490, 599 |
Function
Pathways and Gene Ontology
Reactome pathways
2 curated (TAS) of 11; 5 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
11 pathways:
| ID | Pathway | Evidence |
|---|---|---|
| R-HSA-5083635 | Defective B3GALTL causes PpS ⚕ | curated |
| R-HSA-5173214 | O-glycosylation of TSR domain-containing proteins | curated |
| R-HSA-1643685 | Disease ⚕ | — |
| R-HSA-3906995 | Diseases associated with O-glycosylation of proteins ⚕ | — |
| R-HSA-3781865 | Diseases of glycosylation ⚕ | — |
| R-HSA-5668914 | Diseases of metabolism ⚕ | — |
| R-HSA-1474228 | Degradation of the extracellular matrix | electronic |
| R-HSA-1474244 | Extracellular matrix organization | — |
| R-HSA-392499 | Metabolism of proteins | — |
| R-HSA-5173105 | O-linked glycosylation | — |
| R-HSA-597592 | Post-translational protein modification | — |
MSigDB gene sets: 124 (showing top):
MYOGENIN_Q6, GOMF_METALLOPEPTIDASE_ACTIVITY, GCANCTGNY_MYOD_Q6, RACCACAR_AML_Q6, CAGCTG_AP4_Q5, INAMURA_LUNG_CANCER_SCC_DN, SCHAEFFER_PROSTATE_DEVELOPMENT_48HR_DN, GOMF_GLYCOSAMINOGLYCAN_BINDING, KIM_GASTRIC_CANCER_CHEMOSENSITIVITY, AML1_01, GOMF_SIGNALING_RECEPTOR_BINDING, GOMF_HEPARIN_BINDING, GOBP_TRANSMEMBRANE_TRANSPORT, GOBP_PROTEOLYSIS, OSF2_Q6
GO Biological Process (4): proteolysis (GO:0006508), negative regulation of cell population proliferation (GO:0008285), extracellular matrix organization (GO:0030198), transmembrane transport (GO:0055085)
GO Molecular Function (9): metalloendopeptidase activity (GO:0004222), integrin binding (GO:0005178), heparin binding (GO:0008201), metallopeptidase activity (GO:0008237), zinc ion binding (GO:0008270), low-affinity phosphate transmembrane transporter activity (GO:0009673), peptidase activity (GO:0008233), hydrolase activity (GO:0016787), metal ion binding (GO:0046872)
GO Cellular Component (1): extracellular matrix (GO:0031012)
Reactome top-level categories
8 top-level categories:
| Category | Pathways |
|---|---|
| Extracellular matrix organization | 1 |
| Diseases associated with O-glycosylation of proteins | 1 |
| O-linked glycosylation | 1 |
| Diseases of metabolism | 1 |
| Diseases of glycosylation | 1 |
| Post-translational protein modification | 1 |
| Disease | 1 |
| Metabolism of proteins | 1 |
GO top-level categories
23 GO namespaces:
| Category | Terms |
|---|---|
| protein metabolic process | 1 |
| cell population proliferation | 1 |
| regulation of cell population proliferation | 1 |
| negative regulation of cellular process | 1 |
| extracellular structure organization | 1 |
| external encapsulating structure organization | 1 |
| transport | 1 |
| cellular process | 1 |
| endopeptidase activity | 1 |
| metallopeptidase activity | 1 |
| signaling receptor binding | 1 |
| protein-containing complex binding | 1 |
| cell adhesion molecule binding | 1 |
| glycosaminoglycan binding | 1 |
| sulfur compound binding | 1 |
| peptidase activity | 1 |
| transition metal ion binding | 1 |
| phosphate transmembrane transporter activity | 1 |
| hydrolase activity | 1 |
| catalytic activity, acting on a protein | 1 |
| catalytic activity | 1 |
| cation binding | 1 |
| external encapsulating structure | 1 |
Protein interactions and networks
STRING
showing 15 of 580 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ADAMTS8 | COL18A1 | P39060 | 762 |
| ADAMTS8 | BCAN | Q96GW7 | 598 |
| ADAMTS8 | ACAN | P16112 | 476 |
| ADAMTS8 | ADAMTS7 | Q9UKP4 | 441 |
| ADAMTS8 | EXOC2 | Q96KP1 | 390 |
| ADAMTS8 | FMOD | Q06828 | 390 |
| ADAMTS8 | TSR1 | Q2NL82 | 385 |
| ADAMTS8 | ADAMTS12 | P58397 | 384 |
| ADAMTS8 | IL1A | P01583 | 381 |
| ADAMTS8 | HAPLN2 | Q9GZV7 | 376 |
| ADAMTS8 | THBS1 | P07996 | 373 |
| ADAMTS8 | SLC13A2 | Q13183 | 367 |
| ADAMTS8 | SLC36A2 | Q495M3 | 367 |
| ADAMTS8 | MMP11 | P24347 | 366 |
| ADAMTS8 | TMPRSS11D | O60235 | 364 |
IntAct
Human interaction partners of ADAMTS8 in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
1 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| DSCR9 | physical association | 0.000 | 1 |
BioGRID (4 interactions; top human partners by supporting records): ADAMTS4 (Negative Genetic), DCAF6 (Proximity Label-MS), DSCR9 (Two-hybrid), PARP16 (Proximity Label-MS)
Disease & clinical
Genetic variants
Variant evidence for ADAMTS8: 173 ClinVar records (1 pathogenic / likely pathogenic); 40 GWAS associations. Per-variant detail is on Sugi Variant.
ClinVar
173 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 0 |
| Uncertain significance | 158 |
| Likely benign | 6 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (1)
Showing all 1 pathogenic / likely-pathogenic ClinVar records, ranked by ClinVar review status (expert panel → multiple submitters → single submitter), then by number of submitting labs.
| Variant ID | HGVS | Classification | Review | Submitters |
|---|---|---|---|---|
| 625560 | GRCh37/hg19 11q24.2-24.3(chr11:126809705-130289168) | Pathogenic | criteria provided, single submitter | 1 |
Per-variant reference — Sugi Variant
Explore ADAMTS8’s pathogenic and likely-pathogenic variants individually — each with its ClinVar classification and conditions, applied ACMG criteria (ClinGen expert panel, where curated), the calibrated in-silico predictors (AlphaMissense, REVEL, SaProt, conservation), gnomAD frequency, and the predictor-disagreement QC signal — on Sugi Variant.
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 28 predictions of 668):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 11:130406131 | acceptor_gain | 1.0000 | |
| 11:130408492 | donor_gain | 1.0000 | |
| 11:130408640–130408641 | acceptor_loss | 1.0000 | 3 |
| 11:130408766–130408767 | donor_loss | 1.0000 | 5 |
| 11:130408941–130408942 | acceptor_loss | 1.0000 | 5 |
| 11:130416938–130416939 | donor_loss | 1.0000 | 3 |
| 11:130417076–130417077 | acceptor_loss | 1.0000 | 6 |
| 11:130417080 | acceptor_gain | 1.0000 | |
| 11:130417085 | acceptor_gain | 1.0000 | |
| 11:130419052 | donor_loss | 1.0000 | 2 |
AlphaMissense
1,532 missense substitutions predicted likely pathogenic (of 5,770 scored), across 394 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| M392 | 9 | 0.862 | 0.972 |
| D312 | 8 | 0.947 | 0.978 |
| D644 | 8 | 0.940 | 0.991 |
| D228 | 8 | 0.926 | 0.977 |
| D374 | 8 | 0.922 | 0.970 |
| F293 | 8 | 0.921 | 0.988 |
| N745 | 8 | 0.911 | 0.992 |
| F126 | 8 | 0.907 | 0.989 |
| F638 | 8 | 0.887 | 0.983 |
| F74 | 8 | 0.880 | 0.970 |
| H367 | 8 | 0.874 | 0.950 |
| S346 | 8 | 0.867 | 0.993 |
| D352 | 8 | 0.861 | 0.961 |
| H363 | 8 | 0.841 | 0.943 |
| D621 | 8 | 0.767 | 0.906 |
| H373 | 8 | 0.751 | 0.883 |
| D418 | 8 | 0.712 | 0.861 |
| C656 | 7 | 0.997 | 0.998 |
| C592 | 7 | 0.996 | 0.999 |
| C623 | 7 | 0.996 | 0.999 |
HPA cancer prognostics
RNA cancer specificity: Cancer enhanced (Uterine Corpus Endometrial Carcinoma)
Disease associations
OMIM: gene MIM:605175 | disease phenotypes:
GWAS associations
showing 30 of 40 associations:
| Study | Trait | p-value |
|---|---|---|
| GCST007096_134 | Pulse pressure | 8e-69 |
| GCST011390_5 | Corneal resistance factor | 5e-54 |
| GCST006168_11 | Pulse pressure x alcohol consumption interaction (2df test) | 1e-52 |
| GCST006168_35 | Pulse pressure x alcohol consumption interaction (2df test) | 7e-48 |
| GCST011391_4 | Corneal hysteresis | 6e-30 |
| GCST90000654_24 | Central corneal thickness | 3e-29 |
| GCST009724_18 | Vertical cup-disc ratio (multi-trait analysis) | 2e-28 |
| GCST005667_1 | Central corneal thickness | 1e-26 |
| GCST005580_61 | Intraocular pressure | 4e-25 |
| GCST009723_24 | Vertical cup-disc ratio (adjusted for vertical disc diameter) | 1e-21 |
| GCST007097_46 | Pulse pressure | 3e-21 |
| GCST90011770_57 | Glaucoma (primary open-angle) | 1e-20 |
| GCST007097_47 | Pulse pressure | 3e-17 |
| GCST005580_88 | Intraocular pressure | 4e-17 |
| GCST011496_7 | Abdominal aortic aneurysm | 7e-16 |
| GCST007099_125 | Systolic blood pressure | 6e-15 |
| GCST007094_2 | Diastolic blood pressure | 1e-12 |
| GCST004775_31 | Pulse pressure | 2e-12 |
| GCST009412_11 | Vertical cup-disc ratio | 1e-11 |
| GCST010703_66 | Brain morphology (MOSTest) | 3e-10 |
| GCST90020025_1379 | Waist-to-hip ratio adjusted for BMI | 7e-10 |
| GCST009414_21 | Central corneal thickness | 2e-9 |
| GCST90020027_347 | Waist-hip index | 2e-9 |
| GCST90020028_1499 | Hip circumference adjusted for BMI | 2e-9 |
| GCST004075_1 | Vertical cup-disc ratio | 3e-9 |
| GCST008276_3 | Corneal resistance factor | 3e-9 |
| GCST008277_2 | Corneal hysteresis | 4e-9 |
| GCST002626_9 | Vertical cup-disc ratio | 5e-9 |
| GCST004075_2 | Vertical cup-disc ratio | 7e-9 |
| GCST004074_6 | Intraocular pressure | 2e-8 |
EFO canonical traits (from GWAS)
14 canonical traits:
| EFO ID | Trait name |
|---|---|
| EFO:0005763 | pulse pressure measurement |
| EFO:0004695 | intraocular pressure measurement |
| EFO:0006939 | cup-to-disc ratio measurement |
| EFO:0005213 | central corneal thickness |
| EFO:0004329 | alcohol drinking |
| EFO:0006336 | diastolic blood pressure |
| EFO:0006335 | systolic blood pressure |
| EFO:1002040 | Corneal astigmatism |
| EFO:0010067 | corneal resistance factor |
| EFO:0010066 | corneal hysteresis |
| EFO:0010446 | 2-hydroxyglutaric acid measurement |
| EFO:0004346 | neuroimaging measurement |
| EFO:0007788 | BMI-adjusted waist-hip ratio |
| EFO:0008039 | BMI-adjusted hip circumference |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (CPIC guideline: no)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — M12: Astacin/Adamalysin
CTD chemical–gene interactions
27 total (human), top 27 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Estradiol | affects cotreatment, increases expression, decreases expression | 3 |
| Progesterone | affects cotreatment, increases expression, decreases expression | 3 |
| Acetaminophen | decreases expression, increases expression | 2 |
| Doxorubicin | increases expression | 2 |
| Nickel | increases expression | 2 |
| bisphenol A | decreases methylation, affects cotreatment, increases methylation | 1 |
| sodium arsenite | affects methylation | 1 |
| butyraldehyde | increases expression | 1 |
| aflatoxin B2 | increases methylation | 1 |
| pentanal | increases expression | 1 |
| rofecoxib | affects expression | 1 |
| 2,2’,4,4’,5-brominated diphenyl ether | increases expression | 1 |
| abrine | decreases expression | 1 |
| bisphenol S | increases methylation | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
| Decitabine | affects expression | 1 |
| Fulvestrant | affects cotreatment, increases methylation | 1 |
| Air Pollutants | increases abundance, increases expression | 1 |
| Benzo(a)pyrene | affects methylation, increases methylation | 1 |
| Cisplatin | affects expression | 1 |
| Ibuprofen | increases expression | 1 |
| Tobacco Smoke Pollution | decreases expression | 1 |
| Triclosan | decreases expression | 1 |
| 8-Bromo Cyclic Adenosine Monophosphate | decreases expression | 1 |
| Antirheumatic Agents | decreases expression | 1 |
| Okadaic Acid | increases expression | 1 |
| Particulate Matter | increases abundance, increases expression | 1 |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
2 trials:
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT03059420 | Not specified | RECRUITING | Genetic Studies of Strabismus, Congenital Cranial Dysinnervation Disorders (CCDDs), and Their Associated Anomalies |
| NCT04463316 | Not specified | RECRUITING | GROWing Up With Rare GENEtic Syndromes |
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): abdominal aortic aneurysm, Jacobsen syndrome, Moebius syndrome, open-angle glaucoma