ADAT1
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Summary
ADAT1 (adenosine deaminase tRNA specific 1, HGNC:228) is a protein-coding gene on chromosome 16q23.1, encoding tRNA-specific adenosine deaminase 1 (Q9BUB4). Specifically deaminates adenosine-37 to inosine in tRNA-Ala.
This gene is a member of the ADAR (adenosine deaminase acting on RNA) family. Using site-specific adenosine modification, proteins encoded by these genes participate in the pre-mRNA editing of nuclear transcripts. The protein encoded by this gene, tRNA-specific adenosine deaminase 1, is responsible for the deamination of adenosine 37 to inosine in eukaryotic tRNA. Alternatively spliced transcript variants have been described.
Source: NCBI Gene 23536 — RefSeq curated summary.
At a glance
- GWAS associations: 1
- Clinical variants (ClinVar): 112 total — 1 pathogenic
- MANE Select transcript:
NM_001324445
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:228 |
| Approved symbol | ADAT1 |
| Name | adenosine deaminase tRNA specific 1 |
| Location | 16q23.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000065457 |
| Ensembl biotype | protein_coding |
| OMIM | 604230 |
| Entrez | 23536 |
Gene structure
Transcript identifiers
Ensembl transcripts: 14 — 10 protein_coding, 2 protein_coding_CDS_not_defined, 2 nonsense_mediated_decay
ENST00000307921, ENST00000562374, ENST00000564657, ENST00000565109, ENST00000566445, ENST00000566450, ENST00000567281, ENST00000568001, ENST00000568478, ENST00000568510, ENST00000898849, ENST00000966251, ENST00000966252, ENST00000966253
RefSeq mRNA: 10 — MANE Select: NM_001324445
NM_001324444, NM_001324445, NM_001324446, NM_001324448, NM_001324449, NM_001324450, NM_001324451, NM_001324452, NM_001324453, NM_012091
CCDS: CCDS10922
Canonical transcript exons
ENST00000564657 — 10 exons
| Exon | Start | End |
|---|---|---|
| ENSE00002601564 | 75622403 | 75623281 |
| ENSE00003505993 | 75620631 | 75620820 |
| ENSE00003529428 | 75620266 | 75620334 |
| ENSE00003541224 | 75612243 | 75612861 |
| ENSE00003543477 | 75608224 | 75608323 |
| ENSE00003544127 | 75608843 | 75608988 |
| ENSE00003571105 | 75618586 | 75618640 |
| ENSE00003594337 | 75603085 | 75603171 |
| ENSE00003624907 | 75617142 | 75617272 |
| ENSE00003912731 | 75596868 | 75600348 |
Expression profiles
Bgee: expression breadth ubiquitous, 255 present calls, max score 96.67.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 9.6375 / max 110.7990, expressed in 1783 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 158181 | 8.9996 | 1780 |
| 158180 | 0.6379 | 366 |
Top tissues by expression
286 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| oocyte | CL:0000023 | 96.67 | gold quality |
| secondary oocyte | CL:0000655 | 95.37 | gold quality |
| left testis | UBERON:0004533 | 92.50 | gold quality |
| right testis | UBERON:0004534 | 92.48 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 91.86 | gold quality |
| islet of Langerhans | UBERON:0000006 | 91.78 | gold quality |
| gall bladder | UBERON:0002110 | 91.71 | gold quality |
| rectum | UBERON:0001052 | 91.28 | gold quality |
| right coronary artery | UBERON:0001625 | 90.83 | gold quality |
| metanephros cortex | UBERON:0010533 | 90.72 | gold quality |
| stromal cell of endometrium | CL:0002255 | 90.67 | gold quality |
| lymph node | UBERON:0000029 | 90.62 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 90.44 | gold quality |
| right uterine tube | UBERON:0001302 | 90.36 | gold quality |
| spleen | UBERON:0002106 | 90.36 | gold quality |
| testis | UBERON:0000473 | 90.31 | gold quality |
| right adrenal gland | UBERON:0001233 | 90.31 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 90.25 | gold quality |
| left adrenal gland | UBERON:0001234 | 90.11 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 90.04 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 89.90 | gold quality |
| ganglionic eminence | UBERON:0004023 | 89.72 | gold quality |
| ascending aorta | UBERON:0001496 | 89.63 | gold quality |
| adenohypophysis | UBERON:0002196 | 89.62 | gold quality |
| ectocervix | UBERON:0012249 | 89.55 | gold quality |
| thoracic aorta | UBERON:0001515 | 89.51 | gold quality |
| left uterine tube | UBERON:0001303 | 89.50 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 89.45 | gold quality |
| adrenal tissue | UBERON:0018303 | 89.38 | gold quality |
| adrenal gland | UBERON:0002369 | 89.35 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 5.73 |
| E-MTAB-6386 | no | 203.68 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
100 targeting ADAT1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4795-3P | 100.00 | 74.62 | 4024 |
| HSA-MIR-4425 | 100.00 | 67.59 | 1049 |
| HSA-MIR-12118 | 100.00 | 65.88 | 1270 |
| HSA-MIR-4482-3P | 99.98 | 72.50 | 3147 |
| HSA-MIR-6891-5P | 99.98 | 66.53 | 1372 |
| HSA-MIR-3173-3P | 99.98 | 66.49 | 1217 |
| HSA-MIR-6778-3P | 99.96 | 67.29 | 2693 |
| HSA-MIR-570-3P | 99.96 | 72.41 | 4910 |
| HSA-MIR-4778-3P | 99.93 | 70.40 | 1818 |
| HSA-MIR-6753-3P | 99.93 | 66.57 | 637 |
| HSA-MIR-7107-3P | 99.93 | 66.73 | 627 |
| HSA-MIR-1297 | 99.91 | 73.41 | 3162 |
| HSA-MIR-4493 | 99.90 | 66.48 | 977 |
| HSA-MIR-95-5P | 99.89 | 72.17 | 3973 |
| HSA-MIR-345-3P | 99.89 | 70.23 | 1421 |
| HSA-MIR-4492 | 99.87 | 68.25 | 3611 |
| HSA-MIR-5582-3P | 99.86 | 72.48 | 4221 |
| HSA-MIR-544A | 99.84 | 68.66 | 1965 |
| HSA-MIR-4659A-3P | 99.80 | 72.62 | 4248 |
| HSA-MIR-4659B-3P | 99.80 | 72.62 | 4248 |
| HSA-MIR-26A-5P | 99.78 | 73.52 | 2303 |
| HSA-MIR-26B-5P | 99.78 | 73.51 | 2305 |
| HSA-MIR-4319 | 99.76 | 69.83 | 2586 |
| HSA-MIR-6794-5P | 99.76 | 66.38 | 1048 |
| HSA-MIR-3680-3P | 99.75 | 72.51 | 3095 |
| HSA-MIR-92A-2-5P | 99.75 | 67.01 | 2164 |
| HSA-MIR-187-5P | 99.74 | 70.26 | 1404 |
| HSA-MIR-4465 | 99.71 | 72.56 | 2096 |
| HSA-MIR-3659 | 99.70 | 67.97 | 694 |
| HSA-MIR-4716-3P | 99.69 | 66.73 | 1022 |
Cross-species orthologs
7 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | adat1 | ENSDARG00000061348 |
| mus_musculus | Adat1 | ENSMUSG00000031949 |
| rattus_norvegicus | Adat1 | ENSRNOG00000019434 |
| drosophila_melanogaster | CG12493 | FBGN0035571 |
| drosophila_melanogaster | blanks | FBGN0035608 |
| caenorhabditis_elegans | adr-1 | WBGENE00000079 |
| caenorhabditis_elegans | D2005.1 | WBGENE00008397 |
Paralogs (14): STAU2 (ENSG00000040341), ZFR (ENSG00000056097), ZFR2 (ENSG00000105278), STAU1 (ENSG00000124214), ILF3 (ENSG00000129351), TARBP2 (ENSG00000139546), ADAD2 (ENSG00000140955), ILF2 (ENSG00000143621), ADAR (ENSG00000160710), ADAD1 (ENSG00000164113), STRBP (ENSG00000165209), PRKRA (ENSG00000180228), ADARB2 (ENSG00000185736), ADARB1 (ENSG00000197381)
Protein
Protein identifiers
tRNA-specific adenosine deaminase 1 — Q9BUB4 (reviewed: Q9BUB4)
Alternative names: tRNA-specific adenosine-37 deaminase
All UniProt accessions (8): Q9BUB4, A0A0G2JLA8, H3BNT8, H3BP18, H3BP27, H3BSM1, H3BU72, H3BV89
UniProt curated annotations — full annotation on UniProt →
Function. Specifically deaminates adenosine-37 to inosine in tRNA-Ala.
Tissue specificity. Ubiquitously expressed.
Cofactor. Binds 1 myo-inositol hexakisphosphate (IP6) per subunit.
Similarity. Belongs to the ADAT1 family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q9BUB4-1 | 1 | yes |
| Q9BUB4-2 | 2 |
RefSeq proteins (10): NP_001311373, NP_001311374, NP_001311375, NP_001311377, NP_001311378, NP_001311379, NP_001311380, NP_001311381, NP_001311382, NP_036223 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR002466 | A_deamin | Domain |
Pfam: PF02137
Enzyme classification (BRENDA):
- EC 3.5.4.34 — tRNAAla(adenine37) deaminase (BRENDA: 3 organisms, 4 substrates, 1 inhibitors, 1 Km, 1 kcat entries)
Substrate kinetics (BRENDA)
1 substrates with measured Km, best-characterized 1. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| ADENINE37 IN TRNAALA | — | 1 |
Catalyzed reactions (Rhea), 1 shown:
- adenosine(37) in tRNA(Ala) + H2O + H(+) = inosine(37) in tRNA(Ala) + NH4(+) (RHEA:50968)
UniProt features (22 total): binding site 9, sequence variant 4, sequence conflict 3, chain 1, domain 1, modified residue 1, splice variant 1, region of interest 1, active site 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9BUB4-F1 | 82.40 | 0.69 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 89 (proton donor)
Ligand- & substrate-binding residues (9): 305; 435; 470; 87; 93; 94; 142; 299; 302
Post-translational modifications (1): 191
Function
Pathways and Gene Ontology
Reactome pathways
3 pathways
| ID | Pathway |
|---|---|
| R-HSA-6782315 | tRNA modification in the nucleus and cytosol |
| R-HSA-72306 | tRNA processing |
| R-HSA-8953854 | Metabolism of RNA |
MSigDB gene sets: 96 (showing top):
ELVIDGE_HYPOXIA_DN, BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN, GOBP_TRNA_METABOLIC_PROCESS, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_DN, SANSOM_APC_TARGETS_UP, TIEN_INTESTINE_PROBIOTICS_24HR_UP, NOUZOVA_TRETINOIN_AND_H4_ACETYLATION, ACEVEDO_LIVER_CANCER_UP, GOBP_TRNA_PROCESSING, REACTOME_METABOLISM_OF_RNA, SANSOM_APC_TARGETS, SANSOM_APC_TARGETS_REQUIRE_MYC, GOMF_HYDROLASE_ACTIVITY_ACTING_ON_CARBON_NITROGEN_BUT_NOT_PEPTIDE_BONDS_IN_CYCLIC_AMIDINES, ELVIDGE_HIF1A_TARGETS_UP
GO Biological Process (2): tRNA processing (GO:0008033), RNA processing (GO:0006396)
GO Molecular Function (6): RNA binding (GO:0003723), tRNA-specific adenosine deaminase activity (GO:0008251), tRNA-specific adenosine-37 deaminase activity (GO:0043829), metal ion binding (GO:0046872), adenosine deaminase activity (GO:0004000), hydrolase activity (GO:0016787)
GO Cellular Component (0):
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| tRNA processing | 1 |
| Metabolism of RNA | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| RNA processing | 1 |
| tRNA metabolic process | 1 |
| gene expression | 1 |
| RNA biosynthetic process | 1 |
| primary metabolic process | 1 |
| nucleic acid binding | 1 |
| adenosine deaminase activity | 1 |
| catalytic activity, acting on a tRNA | 1 |
| tRNA-specific adenosine deaminase activity | 1 |
| cation binding | 1 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | 1 |
| deaminase activity | 1 |
| catalytic activity | 1 |
Protein interactions and networks
STRING
584 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ADAT1 | ADAT3 | Q96EY9 | 953 |
| ADAT1 | ADAT2 | Q7Z6V5 | 931 |
| ADAT1 | KARS1 | Q15046 | 920 |
| ADAT1 | AARS1 | P49588 | 865 |
| ADAT1 | C9J5N1 | C9J5N1 | 650 |
| ADAT1 | AARSD1 | Q9BTE6 | 650 |
| ADAT1 | TRMT5 | Q32P41 | 580 |
| ADAT1 | DUXB | A0A1W2PPF3 | 561 |
| ADAT1 | TERF2IP | Q9NYB0 | 545 |
| ADAT1 | IPPK | Q9H8X2 | 506 |
| ADAT1 | DUXA | A6NLW8 | 482 |
| ADAT1 | QPCTL | Q9NXS2 | 448 |
| ADAT1 | PTPA | Q15257 | 445 |
| ADAT1 | YARS1 | P54577 | 435 |
| ADAT1 | PKDREJ | Q9NTG1 | 418 |
| ADAT1 | PLAC9 | Q5JTB6 | 418 |
IntAct
2 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CFTR | ADAT1 | psi-mi:“MI:0915”(physical association) | 0.370 |
BioGRID (10): ADAT1 (Affinity Capture-RNA), ADAT1 (Affinity Capture-RNA), ADAT1 (Affinity Capture-RNA), ADAT1 (Affinity Capture-RNA), ADAT1 (Affinity Capture-RNA), QTRTD1 (Co-fractionation), ADAT1 (Affinity Capture-RNA), ADAT1 (Proximity Label-MS), ADAT1 (PCA), ADAT1 (Affinity Capture-RNA)
ESM2 similar proteins: A7UL74, B6DMK2, E7F654, F1Q7Z7, F1S5L4, F4HU58, F4KH86, F6QXW0, O09053, O42912, O94443, P53065, P97564, Q12383, Q22618, Q28FE8, Q32NG0, Q3EBC8, Q3KR54, Q3YK19, Q497V5, Q4KLT3, Q4R7N3, Q501D5, Q5D892, Q5RAY7, Q5SUE7, Q5SXJ3, Q5ZI16, Q61586, Q61J97, Q68FJ9, Q6CP50, Q6DHJ1, Q6NXH8, Q7ZVS8, Q84MA1, Q8BWQ4, Q8C1Z8, Q8IYT2
Diamond homologs: O42912, P53065, P97616, Q28FE8, Q4R7N3, Q5ZI16, Q9BUB4, Q9JHI2, Q9JI20, Q9NS39, Q96M93, Q9U3D6, Q9V3R6, Q3KR54, Q5SUE7, P51400, P78563, Q22618, Q91ZS8, Q9NII1
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
112 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 0 |
| Uncertain significance | 93 |
| Likely benign | 6 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (1)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1682045 | NC_000016.9:g.(?75428968)(75690509_?)del | Pathogenic |
SpliceAI
1718 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 16:75608324:C:CC | acceptor_gain | 1.0000 |
| 16:75608326:A:C | acceptor_gain | 1.0000 |
| 16:75612270:T:TA | donor_gain | 1.0000 |
| 16:75620260:GCTT:G | donor_loss | 1.0000 |
| 16:75620261:CTTA:C | donor_loss | 1.0000 |
| 16:75620262:TTAC:T | donor_loss | 1.0000 |
| 16:75620263:TACCG:T | donor_loss | 1.0000 |
| 16:75620264:A:AC | donor_gain | 1.0000 |
| 16:75620264:ACC:A | donor_loss | 1.0000 |
| 16:75620265:C:CA | donor_loss | 1.0000 |
| 16:75620265:C:CC | donor_gain | 1.0000 |
| 16:75620265:CCGTT:C | donor_gain | 1.0000 |
| 16:75620272:T:TA | donor_gain | 1.0000 |
| 16:75620330:TGTCA:T | acceptor_gain | 1.0000 |
| 16:75620331:GTCA:G | acceptor_gain | 1.0000 |
| 16:75620332:TCA:T | acceptor_gain | 1.0000 |
| 16:75620333:CA:C | acceptor_gain | 1.0000 |
| 16:75620333:CAC:C | acceptor_gain | 1.0000 |
| 16:75620333:CACTG:C | acceptor_loss | 1.0000 |
| 16:75620335:C:CC | acceptor_gain | 1.0000 |
| 16:75620335:CTGTG:C | acceptor_loss | 1.0000 |
| 16:75620336:T:A | acceptor_loss | 1.0000 |
| 16:75620627:TCA:T | donor_loss | 1.0000 |
| 16:75620628:CA:C | donor_loss | 1.0000 |
| 16:75620629:A:AC | donor_gain | 1.0000 |
| 16:75620630:C:CC | donor_gain | 1.0000 |
| 16:75620630:C:CT | donor_loss | 1.0000 |
| 16:75620630:CCTT:C | donor_gain | 1.0000 |
| 16:75620631:CTTG:C | donor_gain | 1.0000 |
| 16:75620632:TTGC:T | donor_gain | 1.0000 |
AlphaMissense
709 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 16:75618621:G:C | S86R | 0.990 |
| 16:75618621:G:T | S86R | 0.990 |
| 16:75618623:T:G | S86R | 0.990 |
| 16:75618594:A:C | S95R | 0.988 |
| 16:75618594:A:T | S95R | 0.988 |
| 16:75618596:T:G | S95R | 0.988 |
| 16:75618604:G:T | A92D | 0.988 |
| 16:75618625:T:G | D85A | 0.988 |
| 16:75618625:T:A | D85V | 0.986 |
| 16:75620697:C:G | A35P | 0.986 |
| 16:75620694:C:G | A36P | 0.985 |
| 16:75618597:C:A | R94S | 0.984 |
| 16:75618597:C:G | R94S | 0.984 |
| 16:75618624:A:C | D85E | 0.984 |
| 16:75618624:A:T | D85E | 0.984 |
| 16:75618626:C:G | D85H | 0.984 |
| 16:75617267:A:G | L100P | 0.981 |
| 16:75620709:A:G | W31R | 0.981 |
| 16:75620709:A:T | W31R | 0.981 |
| 16:75618616:G:T | A88D | 0.977 |
| 16:75620311:C:G | G65R | 0.977 |
| 16:75620311:C:T | G65R | 0.977 |
| 16:75618625:T:C | D85G | 0.976 |
| 16:75620777:G:T | A8D | 0.976 |
| 16:75618598:C:G | R94T | 0.975 |
| 16:75620296:A:G | C70R | 0.975 |
| 16:75620310:C:T | G65E | 0.975 |
| 16:75620317:A:G | S63P | 0.975 |
| 16:75618618:A:C | H87Q | 0.974 |
| 16:75618618:A:T | H87Q | 0.974 |
dbSNP variants (sampled 300 via entrez): RS1000019493 (16:75603580 T>C), RS1000052965 (16:75598249 G>C), RS1000085113 (16:75598419 C>T), RS1000112630 (16:75613488 G>C), RS1000145714 (16:75616952 A>G), RS1000155554 (16:75617273 C>A,T), RS1000241629 (16:75623452 G>A,C), RS1000288673 (16:75619198 G>A,C), RS1000322332 (16:75619483 G>T), RS1000478612 (16:75622308 T>C), RS1000574929 (16:75607418 C>T), RS1000621672 (16:75602365 A>G), RS1000681045 (16:75609564 C>A), RS1000760598 (16:75604236 C>A), RS1000841682 (16:75598907 T>C)
Disease associations
OMIM: gene MIM:604230 | disease phenotypes: MIM:614970, MIM:615397
GenCC curated gene-disease
Mondo (3): prostate cancer (MONDO:0008315), Joubert syndrome 20 (MONDO:0013994), Meckel syndrome, type 11 (MONDO:0014164)
Orphanet (3): Familial prostate cancer (Orphanet:1331), Isolated Joubert syndrome (Orphanet:475), Meckel syndrome (Orphanet:564)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
1 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002553_10 | Pancreatic cancer | 1.000000e-10 |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D011471 | Prostatic Neoplasms | C04.588.945.440.770; C12.100.500.260.750; C12.100.500.565.625; C12.200.294.260.750; C12.200.294.565.625; C12.200.758.409.750; C12.900.619.750 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
24 total (human), top 24 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| aristolochic acid I | decreases expression | 1 |
| GSK-J4 | decreases expression | 1 |
| bisphenol A | decreases methylation | 1 |
| cobaltous chloride | decreases expression | 1 |
| butyraldehyde | decreases expression | 1 |
| potassium chromate(VI) | affects cotreatment, decreases expression | 1 |
| 2,3-bis(3’-hydroxybenzyl)butyrolactone | affects cotreatment, increases expression | 1 |
| epigallocatechin gallate | affects cotreatment, decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| ICG 001 | increases expression | 1 |
| abrine | decreases expression | 1 |
| Resveratrol | affects cotreatment, increases expression | 1 |
| Acetaminophen | increases expression | 1 |
| Ethanol | decreases expression | 1 |
| Caffeine | increases phosphorylation | 1 |
| Coumestrol | affects cotreatment, increases expression | 1 |
| Doxorubicin | decreases expression | 1 |
| Estradiol | increases expression | 1 |
| Plant Extracts | affects cotreatment, increases expression | 1 |
| 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide | decreases expression | 1 |
| Cyclosporine | decreases expression | 1 |
| Cadmium Chloride | decreases expression | 1 |
| Lactic Acid | decreases expression | 1 |
| tert-Butylhydroperoxide | decreases expression | 1 |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00029224 | PHASE4 | COMPLETED | Treatment With Zoledronic Acid in Patients With Breast Cancer, Multiple Myeloma, and Prostate Cancer With Cancer Related Bone Lesions |
| NCT00035997 | PHASE4 | COMPLETED | Open-label Trial on the Effect of I.V. Zoledronic Acid 4 mg on Bone Density in Hormone Sensitive Prostate Cancer Patients With Bone Metastasis |
| NCT00063609 | PHASE4 | COMPLETED | The Effect of Zoledronic Acid on Bone Loss in Prostate Cancer Patients Undergoing Androgen Deprivation Therapy |
| NCT00103623 | PHASE4 | SUSPENDED | The Plenaxis® Experience Study |
| NCT00106392 | PHASE4 | COMPLETED | A Safety and Efficacy Study of Prograf in the Prevention of Erectile Dysfunction After Radical Prostatectomy |
| NCT00185029 | PHASE4 | UNKNOWN | MR-Lymphography and Lymph Node Staging in Prostate Cancer |
| NCT00199485 | PHASE4 | COMPLETED | Angelica Sinensis for the Treatment of Hot Flashes in Men Undergoing LHRH Therapy for Prostate Cancer |
| NCT00219219 | PHASE4 | COMPLETED | Zoledronic Acid in the Prevention of Skeletal-related Events in Hormone Refractory and Hormone-sensitive Prostate Cancer Patients With Bone Metastases |
| NCT00219271 | PHASE4 | COMPLETED | Effect Of Zoledronic Acid On Circulating And Bone Marrow-Residing Prostate Cancer Cells In Patients With Clinically Localized Prostate Cancer |
| NCT00237146 | PHASE4 | COMPLETED | Study to Evaluate Zoledronic Acid on Quality of Life and Skeletal-related Events as Adjuvant Treatment in Patients With Hormone-naïve Prostate Cancer and Bone Metastasis Who Have Undergone Orchiectomy |
| NCT00242554 | PHASE4 | COMPLETED | Open-label Phase IV Clinical Trial to Evaluate the Safety and Tolerability of Zoledronic Acid in Patients With Prostate Cancer and Bone Metastases |
| NCT00280098 | PHASE4 | COMPLETED | Docetaxel in the Treatment of Hormone Refractory Prostate Cancer |
| NCT00293696 | PHASE4 | COMPLETED | Casodex/Zoladex Biomarkers in Localised Prostate Cancer |
| NCT00334139 | PHASE4 | COMPLETED | Effect of Zoledronic Acid on Bone Metabolism in Patients With Bone Metastasis and Prostate or Breast Cancer |
| NCT00375765 | PHASE4 | COMPLETED | Effects On Dihydrotestosterone Regulated Gene Expression In Benign Prostatic Hyperplasia Or Prostate Cancer |
| NCT00391690 | PHASE4 | COMPLETED | Evaluation of Bone Markers as Diagnostic Tools for Early Detection of Bone Metastases in Patients With High Risk Prostate Cancer |
| NCT00422708 | PHASE4 | COMPLETED | Local Anesthesia for Prostate Biopsy |
| NCT00526331 | PHASE4 | COMPLETED | Evaluation of Arterial Pressure Based Cardiac Output for Goal-Directed Perioperative Therapy |
| NCT00590213 | PHASE4 | COMPLETED | Compare the Value of Prophylactic Versus Therapeutic Breast Radiotherapy in CASODEX |
| NCT00629330 | PHASE4 | TERMINATED | Dissemination of Prostate Cancer Screening to PCP’s in African American Communities |
| NCT00771966 | PHASE4 | COMPLETED | Radical Prostatectomy and Perioperative Fluid Therapy |
| NCT00805701 | PHASE4 | COMPLETED | Study Assessing The Efficacy And Safety Of Avodart (Dutasteride) At Improving Urinary Symptoms In Men With Prostate Cancer Who Are Undergoing Seed Implantation |
| NCT00859027 | PHASE4 | COMPLETED | Effect Of Risedronate On Bone Mass In Older Men Receiving Neoadjuvant Therapy For Prostate Cancer |
| NCT00906269 | PHASE4 | UNKNOWN | Can Hyperbaric Oxygen Improve Erectile Function Following Surgery for Prostate Cancer |
| NCT00953277 | PHASE4 | COMPLETED | Study of Nerve Reconstruction Using AVANCE in Subjects Who Undergo Robotic Assisted Prostatectomy for Treatment of Prostate Cancer |
| NCT00982800 | PHASE4 | COMPLETED | Does Postoperative Gabapentin Reduce Pain, Opioid Consumption and Anxiety and Have a Positive Effect on Health Related Quality of Life After Radical Prostatectomy? |
| NCT01083199 | PHASE4 | COMPLETED | Global Performance Evaluation of the AMS CONTINUUM™ Device |
| NCT01136226 | PHASE4 | COMPLETED | Evaluate Recovery of Testosterone for Patients Using Eligard |
| NCT01161563 | PHASE4 | COMPLETED | Randomized Crossover Trial to Assess the Tolerability of Gonadotropin Releasing Hormone (GnRH) Analogue Administration |
| NCT01230905 | PHASE4 | COMPLETED | Study to Monitor the Effects of Androgen Suppression Treatment on the Heart |
| NCT01296672 | PHASE4 | COMPLETED | 3 Month Finasteride Challenge Test Can Significantly Improve the Performance of Screening for Prostate Cancer |
| NCT01365143 | PHASE4 | TERMINATED | Prospective Randomized Trial Comparing Robotic Versus Open Radical Prostatectomy |
| NCT01379742 | PHASE4 | UNKNOWN | Comparison of Between ThinSeed™ and OncoSeed™ for Permanent Prostate Brachytherapy |
| NCT01486563 | PHASE4 | COMPLETED | Hydroxyethyl Starch and Renal Function After Radical Prostatectomy |
| NCT01511874 | PHASE4 | COMPLETED | Efficacy and Safety Study of ELIGARD 22.5mg With Prostate Cancer |
| NCT01512472 | PHASE4 | TERMINATED | Firmagon (Degarelix) Intermittent Therapy |
| NCT01547416 | PHASE4 | COMPLETED | The Effect of Combined General/Epidural Anesthesia Versus General Anesthesia on Diaphragmatic Function |
| NCT01571544 | PHASE4 | COMPLETED | The Use of Thermal Suits as Preventing Hypothermia During Surgery |
| NCT01581749 | PHASE4 | UNKNOWN | Evaluation of Truebeam for Low-Intermediate Risk Prostate Cancer |
| NCT01649635 | PHASE4 | COMPLETED | Study of Cabazitaxel Combined With Prednisone and Prophylaxis of Neutropenia Complications in the Treatment of Patients With Metastatic Castration-resistant Prostate Cancer |
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): Joubert syndrome 20, Meckel syndrome, type 11