ADCY4
gene geneOn this page
Also known as AC4
Summary
ADCY4 (adenylate cyclase 4, HGNC:235) is a protein-coding gene on chromosome 14q12, encoding Adenylate cyclase type 4 (Q8NFM4). Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.
This gene encodes a member of the family of adenylate cyclases, which are membrane-associated enzymes that catalyze the formation of the secondary messenger cyclic adenosine monophosphate (cAMP). Mouse studies show that adenylate cyclase 4, along with adenylate cyclases 2 and 3, is expressed in olfactory cilia, suggesting that several different adenylate cyclases may couple to olfactory receptors and that there may be multiple receptor-mediated mechanisms for the generation of cAMP signals. Alternative splicing results in transcript variants.
Source: NCBI Gene 196883 — RefSeq curated summary.
At a glance
- GWAS associations: 3
- Clinical variants (ClinVar): 177 total — 1 pathogenic, 1 likely-pathogenic
- Druggable target: yes
- MANE Select transcript:
NM_001198568
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:235 |
| Approved symbol | ADCY4 |
| Name | adenylate cyclase 4 |
| Location | 14q12 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | AC4 |
| Ensembl gene | ENSG00000129467 |
| Ensembl biotype | protein_coding |
| OMIM | 600292 |
| Entrez | 196883 |
Gene structure
Transcript identifiers
Ensembl transcripts: 23 — 10 protein_coding, 9 retained_intron, 2 nonsense_mediated_decay, 2 protein_coding_CDS_not_defined
ENST00000310677, ENST00000418030, ENST00000545213, ENST00000554068, ENST00000554577, ENST00000554674, ENST00000554781, ENST00000554936, ENST00000554959, ENST00000555684, ENST00000556932, ENST00000557056, ENST00000557099, ENST00000558125, ENST00000558563, ENST00000559167, ENST00000560635, ENST00000561138, ENST00000561200, ENST00000884390, ENST00000884391, ENST00000884392, ENST00000884393
RefSeq mRNA: 3 — MANE Select: NM_001198568
NM_001198568, NM_001198592, NM_139247
CCDS: CCDS9627
Canonical transcript exons
ENST00000418030 — 25 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000930135 | 24330168 | 24330295 |
| ENSE00003467824 | 24325377 | 24325474 |
| ENSE00003469039 | 24332791 | 24332988 |
| ENSE00003498772 | 24322066 | 24322224 |
| ENSE00003499557 | 24325818 | 24325887 |
| ENSE00003505122 | 24329860 | 24330018 |
| ENSE00003505532 | 24331208 | 24331356 |
| ENSE00003509666 | 24323344 | 24323454 |
| ENSE00003511569 | 24326299 | 24326342 |
| ENSE00003525710 | 24319329 | 24319436 |
| ENSE00003536756 | 24322904 | 24323088 |
| ENSE00003555809 | 24331788 | 24331937 |
| ENSE00003588658 | 24331018 | 24331129 |
| ENSE00003591206 | 24332522 | 24332683 |
| ENSE00003592867 | 24324062 | 24324199 |
| ENSE00003625701 | 24318359 | 24318568 |
| ENSE00003626932 | 24326079 | 24326165 |
| ENSE00003638960 | 24318654 | 24318778 |
| ENSE00003651129 | 24319098 | 24319212 |
| ENSE00003655299 | 24322624 | 24322708 |
| ENSE00003655974 | 24329061 | 24329234 |
| ENSE00003667278 | 24324307 | 24324391 |
| ENSE00003683261 | 24329401 | 24329533 |
| ENSE00003688542 | 24319742 | 24319888 |
| ENSE00003904577 | 24334494 | 24335071 |
Expression profiles
Bgee: expression breadth ubiquitous, 142 present calls, max score 98.01.
FANTOM5 (CAGE): breadth broad, TPM avg 2.3750 / max 76.6030, expressed in 533 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 142595 | 2.1524 | 507 |
| 142596 | 0.2227 | 136 |
Top tissues by expression
142 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| apex of heart | UBERON:0002098 | 98.01 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 97.10 | gold quality |
| adipose tissue | UBERON:0001013 | 96.86 | gold quality |
| omental fat pad | UBERON:0010414 | 96.77 | gold quality |
| left uterine tube | UBERON:0001303 | 96.47 | gold quality |
| right lung | UBERON:0002167 | 96.34 | gold quality |
| body of uterus | UBERON:0009853 | 95.87 | gold quality |
| heart left ventricle | UBERON:0002084 | 95.67 | gold quality |
| thoracic mammary gland | UBERON:0005200 | 95.67 | gold quality |
| mammary gland | UBERON:0001911 | 95.66 | gold quality |
| myometrium | UBERON:0001296 | 95.57 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 95.42 | gold quality |
| endocervix | UBERON:0000458 | 95.22 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 94.80 | gold quality |
| spleen | UBERON:0002106 | 94.78 | gold quality |
| mucosa of stomach | UBERON:0001199 | 94.63 | gold quality |
| metanephros cortex | UBERON:0010533 | 94.60 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 94.46 | gold quality |
| ectocervix | UBERON:0012249 | 94.30 | gold quality |
| thyroid gland | UBERON:0002046 | 94.13 | gold quality |
| sural nerve | UBERON:0015488 | 93.83 | gold quality |
| right atrium auricular region | UBERON:0006631 | 93.75 | gold quality |
| nerve | UBERON:0001021 | 93.52 | gold quality |
| tibial nerve | UBERON:0001323 | 93.52 | gold quality |
| heart | UBERON:0000948 | 93.51 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 93.38 | gold quality |
| lower esophagus | UBERON:0013473 | 93.34 | gold quality |
| vagina | UBERON:0000996 | 93.32 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 93.06 | gold quality |
| uterine cervix | UBERON:0000002 | 92.41 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 17.11 |
| E-MTAB-6678 | yes | 12.49 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): NR5A1, SP1, SP3
Literature-anchored findings (GeneRIF, showing 4)
- This paper reports the presence of adenylyl cyclases 2, 3, and 4 in mouse olfactory cilia. (PMID:11055432)
- The HIV-1 regulatory protein Tat was shown to inhibit the activity of adenylyl cyclase in rat microglial cells. (PMID:11299302)
- AC4 and AC2, both isoforms stimulated by Gbetagamma, are expressed in bronchial nonlipid raft membrane fractions where they colocalize with and couple to prostanoid EP2 receptors. (PMID:21228062)
- ADCY4 may be used as an epigenetic biomarker for breast cancer, as well as a possible target for therapy. (PMID:31584294)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Adcy4 | ENSMUSG00000022220 |
| rattus_norvegicus | Adcy4 | ENSRNOG00000020401 |
Paralogs (17): GUCY1B1 (ENSG00000061918), GUCY2C (ENSG00000070019), ADCY2 (ENSG00000078295), GUCY2F (ENSG00000101890), NPR3 (ENSG00000113389), ADCY7 (ENSG00000121281), GUCY2D (ENSG00000132518), ADCY3 (ENSG00000138031), GUCY1A2 (ENSG00000152402), ADCY8 (ENSG00000155897), NPR2 (ENSG00000159899), ADCY9 (ENSG00000162104), GUCY1A1 (ENSG00000164116), ADCY1 (ENSG00000164742), NPR1 (ENSG00000169418), ADCY5 (ENSG00000173175), ADCY6 (ENSG00000174233)
Protein
Protein identifiers
Adenylate cyclase type 4 — Q8NFM4 (reviewed: Q8NFM4)
Alternative names: ATP pyrophosphate-lyase 4, Adenylate cyclase type IV, Adenylyl cyclase 4
All UniProt accessions (6): Q8NFM4, G3V258, G3V262, H0YJ57, H0YLM0, H0YN72
UniProt curated annotations — full annotation on UniProt →
Function. Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.
Subcellular location. Cell membrane. Cytoplasm.
Tissue specificity. Detected in the zona glomerulosa and the zona fasciculata in the adrenal gland (at protein level).
Activity regulation. Activated by forskolin. Insensitive to calcium/calmodulin. Stimulated by GNAS and by the G-protein beta and gamma subunit complex.
Cofactor. Binds 2 magnesium ions per subunit. Is also active with manganese (in vitro).
Domain organisation. The protein contains two modules with six transmembrane helices each; both are required for catalytic activity. Isolated N-terminal or C-terminal modules have no catalytic activity, but when they are brought together, enzyme activity is restored. The active site is at the interface of the two modules.
Similarity. Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q8NFM4-1 | 1 | yes |
| Q8NFM4-2 | 2 |
RefSeq proteins (3): NP_001185497, NP_001185521, NP_640340 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001054 | A/G_cyclase | Domain |
| IPR009398 | Adcy_conserved_dom | Domain |
| IPR018297 | A/G_cyclase_CS | Conserved_site |
| IPR029787 | Nucleotide_cyclase | Homologous_superfamily |
| IPR030672 | Adcy | Family |
| IPR032628 | AC_N | Domain |
Pfam: PF00211, PF06327, PF16214
Catalyzed reactions (Rhea), 1 shown:
- ATP = 3’,5’-cyclic AMP + diphosphate (RHEA:15389)
UniProt features (38 total): transmembrane region 12, binding site 12, topological domain 4, splice variant 4, modified residue 2, glycosylation site 2, chain 1, sequence conflict 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q8NFM4-F1 | 79.03 | 0.36 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (12): 278–283; 278; 278; 279; 320–322; 322; 322; 366; 925; 1005–1007; 1012–1016; 1052
Post-translational modifications (2): 520, 536
Glycosylation sites (2): 697, 704
Function
Pathways and Gene Ontology
Reactome pathways
46 pathways
| ID | Pathway |
|---|---|
| R-HSA-163359 | Glucagon signaling in metabolic regulation |
| R-HSA-163615 | PKA activation |
| R-HSA-164378 | PKA activation in glucagon signalling |
| R-HSA-170660 | Adenylate cyclase activating pathway |
| R-HSA-170670 | Adenylate cyclase inhibitory pathway |
| R-HSA-418555 | G alpha (s) signalling events |
| R-HSA-418594 | G alpha (i) signalling events |
| R-HSA-418597 | G alpha (z) signalling events |
| R-HSA-432040 | Vasopressin regulates renal water homeostasis via Aquaporins |
| R-HSA-5610787 | Hedgehog ‘off’ state |
| R-HSA-9634597 | GPER1 signaling |
| R-HSA-9660821 | ADORA2B mediated anti-inflammatory cytokines production |
| R-HSA-9664323 | FCGR3A-mediated IL10 synthesis |
| R-HSA-9856530 | High laminar flow shear stress activates signaling by PIEZO1 and PECAM1:CDH5:KDR in endothelial cells |
| R-HSA-111885 | Opioid Signalling |
| R-HSA-111931 | PKA-mediated phosphorylation of CREB |
| R-HSA-111933 | Calmodulin induced events |
| R-HSA-111996 | Ca-dependent events |
| R-HSA-111997 | CaM pathway |
| R-HSA-112040 | G-protein mediated events |
| R-HSA-112043 | PLC beta mediated events |
| R-HSA-112314 | Neurotransmitter receptors and postsynaptic signal transmission |
| R-HSA-112315 | Transmission across Chemical Synapses |
| R-HSA-112316 | Neuronal System |
| R-HSA-1430728 | Metabolism |
| R-HSA-1489509 | DAG and IP3 signaling |
| R-HSA-162582 | Signal Transduction |
| R-HSA-163685 | Integration of energy metabolism |
| R-HSA-1643685 | Disease |
| R-HSA-372790 | Signaling by GPCR |
MSigDB gene sets: 215 (showing top):
GOBP_RESPONSE_TO_NITROGEN_COMPOUND, BENPORATH_ES_WITH_H3K27ME3, GOBP_RESPONSE_TO_FLUID_SHEAR_STRESS, REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS, GOBP_CELLULAR_RESPONSE_TO_FLUID_SHEAR_STRESS, GOBP_CAMP_BIOSYNTHETIC_PROCESS, GOBP_ORGANOPHOSPHATE_METABOLIC_PROCESS, GOBP_CYCLIC_NUCLEOTIDE_METABOLIC_PROCESS, GOBP_NUCLEOSIDE_PHOSPHATE_BIOSYNTHETIC_PROCESS, REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION, GOBP_CELLULAR_RESPONSE_TO_OXYGEN_CONTAINING_COMPOUND, CAGCTG_AP4_Q5, GOBP_ORGANOPHOSPHATE_BIOSYNTHETIC_PROCESS, GOBP_CARBOHYDRATE_DERIVATIVE_METABOLIC_PROCESS, chr14q12
GO Biological Process (8): renal water homeostasis (GO:0003091), cAMP biosynthetic process (GO:0006171), adenylate cyclase-modulating G protein-coupled receptor signaling pathway (GO:0007188), adenylate cyclase-activating G protein-coupled receptor signaling pathway (GO:0007189), intracellular signal transduction (GO:0035556), cellular response to glucagon stimulus (GO:0071377), vascular endothelial cell response to laminar fluid shear stress (GO:0097700), cyclic nucleotide biosynthetic process (GO:0009190)
GO Molecular Function (8): adenylate cyclase activity (GO:0004016), protein kinase C binding (GO:0005080), ATP binding (GO:0005524), metal ion binding (GO:0046872), nucleotide binding (GO:0000166), protein binding (GO:0005515), lyase activity (GO:0016829), phosphorus-oxygen lyase activity (GO:0016849)
GO Cellular Component (4): cytoplasm (GO:0005737), plasma membrane (GO:0005886), membrane (GO:0016020), dendrite (GO:0030425)
Reactome top-level categories
Rollup of top-18 pathways:
| Category | Pathways |
|---|---|
| GPCR downstream signalling | 3 |
| G-protein mediated events | 2 |
| Anti-inflammatory response favouring Leishmania parasite infection | 2 |
| Integration of energy metabolism | 1 |
| PKA-mediated phosphorylation of CREB | 1 |
| Glucagon signaling in metabolic regulation | 1 |
| Activation of GABAB receptors | 1 |
| Aquaporin-mediated transport | 1 |
| Signaling by Hedgehog | 1 |
| G alpha (s) signalling events | 1 |
| Response of endothelial cells to shear stress | 1 |
| G alpha (i) signalling events | 1 |
| Calmodulin induced events | 1 |
| CaM pathway | 1 |
| PLC beta mediated events | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| intracellular anatomical structure | 2 |
| cellular anatomical structure | 2 |
| renal system process | 1 |
| multicellular organismal-level water homeostasis | 1 |
| purine ribonucleotide biosynthetic process | 1 |
| cyclic nucleotide biosynthetic process | 1 |
| cAMP metabolic process | 1 |
| adenylate cyclase activity | 1 |
| G protein-coupled receptor signaling pathway | 1 |
| adenylate cyclase-modulating G protein-coupled receptor signaling pathway | 1 |
| adenylate cyclase activator activity | 1 |
| signal transduction | 1 |
| response to glucagon | 1 |
| cellular response to peptide hormone stimulus | 1 |
| cellular response to laminar fluid shear stress | 1 |
| vascular endothelial cell response to fluid shear stress | 1 |
| nucleotide biosynthetic process | 1 |
| cyclic nucleotide metabolic process | 1 |
| cyclase activity | 1 |
| phosphorus-oxygen lyase activity | 1 |
| protein kinase binding | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| cation binding | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| binding | 1 |
| catalytic activity | 1 |
| lyase activity | 1 |
| membrane | 1 |
| cell periphery | 1 |
| neuron projection | 1 |
| dendritic tree | 1 |
Protein interactions and networks
STRING
1400 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ADCY4 | RAPGEF4 | Q8WZA2 | 555 |
| ADCY4 | POLR1D | P0DPB6 | 541 |
| ADCY4 | GNAQ | P50148 | 458 |
| ADCY4 | ADCY5 | O95622 | 457 |
| ADCY4 | ADCY8 | P40145 | 451 |
| ADCY4 | ADCY7 | P51828 | 427 |
| ADCY4 | NMU | P48645 | 425 |
| ADCY4 | OLFML1 | Q6UWY5 | 418 |
| ADCY4 | S1PR1 | P21453 | 412 |
| ADCY4 | PRKACA | P17612 | 409 |
| ADCY4 | PRKACB | P22694 | 402 |
| ADCY4 | IGFBP7 | Q16270 | 400 |
| ADCY4 | PRKACG | P22612 | 398 |
| ADCY4 | ADCY10 | Q96PN6 | 393 |
| ADCY4 | CCN1 | O00622 | 392 |
| ADCY4 | CALML4 | Q96GE6 | 392 |
IntAct
23 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| TRIM54 | ADCY4 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ADCY4 | TTC23 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ADCY4 | C1orf50 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ESRRG | ADCY4 | psi-mi:“MI:0915”(physical association) | 0.560 |
| PPARG | ADCY4 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TTC23 | ADCY4 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ADCY4 | C1orf50 | psi-mi:“MI:0915”(physical association) | 0.000 |
| ESRRG | ADCY4 | psi-mi:“MI:0915”(physical association) | 0.000 |
| ADCY4 | ESRRG | psi-mi:“MI:0915”(physical association) | 0.000 |
| ADCY4 | PPARG | psi-mi:“MI:0915”(physical association) | 0.000 |
| ADCY4 | psi-mi:“MI:0915”(physical association) | 0.000 | |
| ADCY4 | brnQ3 | psi-mi:“MI:0915”(physical association) | 0.000 |
| ADCY4 | arsB | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (7): ADCY4 (Two-hybrid), ADCY4 (Affinity Capture-MS), ADCY4 (Two-hybrid), PPARG (Two-hybrid), C1orf50 (Two-hybrid), ESRRG (Two-hybrid), ADCY4 (Cross-Linking-MS (XL-MS))
ESM2 similar proteins: A0A0U1RPR8, O02740, O08644, O09127, O15197, O19179, O73875, O73878, P0C0K6, P0C0K7, P14616, P16067, P20594, P21709, P26770, P29317, P29322, P35590, P46197, P51839, P51840, P51841, P51842, P52333, P52785, P54753, P54754, P54760, P54761, P55203, P55205, Q02846, Q03146, Q06805, Q06806, Q08345, Q1KL86, Q5JZY3, Q5SDA5, Q60750
Diamond homologs: A0A078BQP2, A0A0U1RPR8, E7EAU8, H2L002, O02298, O02740, O16715, O19179, O54865, O62179, O75343, P0A4Y1, P16065, P16066, P16068, P18293, P18910, P19686, P19687, P20594, P20595, P22717, P23897, P25092, P26770, P33402, P51840, P51841, P51842, P52785, P55202, P55203, P55204, P70106, P90895, P91550, P92006, P9WQ34, P9WQ35, Q02108
SIGNOR signaling
2 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| NF1 | up-regulates | ADCY4 | |
| ADCY4 | “up-regulates quantity” | “3’,5’-cyclic AMP” | “chemical modification” |
Disease & clinical
Clinical variants and AI predictions
ClinVar
177 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 1 |
| Uncertain significance | 141 |
| Likely benign | 8 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (2)
| Variant ID | HGVS | Classification |
|---|---|---|
| 442398 | GRCh37/hg19 14q11.2-12(chr14:24233721-31377083)x1 | Pathogenic |
| 2685479 | GRCh37/hg19 14q11.2-12(chr14:24445622-28262222)x1 | Likely pathogenic |
SpliceAI
5167 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 14:24318652:A:AC | donor_gain | 1.0000 |
| 14:24318653:C:CC | donor_gain | 1.0000 |
| 14:24319244:A:T | acceptor_gain | 1.0000 |
| 14:24319323:CCGTA:C | donor_loss | 1.0000 |
| 14:24319324:CGTA:C | donor_loss | 1.0000 |
| 14:24319325:GTA:G | donor_loss | 1.0000 |
| 14:24319326:TACC:T | donor_loss | 1.0000 |
| 14:24319327:A:C | donor_loss | 1.0000 |
| 14:24319328:C:A | donor_loss | 1.0000 |
| 14:24319432:AGCAG:A | acceptor_gain | 1.0000 |
| 14:24319433:GCAG:G | acceptor_gain | 1.0000 |
| 14:24319434:CAG:C | acceptor_gain | 1.0000 |
| 14:24319434:CAGC:C | acceptor_gain | 1.0000 |
| 14:24319435:AG:A | acceptor_gain | 1.0000 |
| 14:24319436:GC:G | acceptor_loss | 1.0000 |
| 14:24319437:C:CC | acceptor_gain | 1.0000 |
| 14:24319437:CT:C | acceptor_loss | 1.0000 |
| 14:24319438:T:A | acceptor_loss | 1.0000 |
| 14:24319762:T:C | donor_gain | 1.0000 |
| 14:24322019:AGGC:A | donor_gain | 1.0000 |
| 14:24322246:C:CT | acceptor_gain | 1.0000 |
| 14:24324061:CCAGG:C | donor_gain | 1.0000 |
| 14:24325475:C:CC | acceptor_gain | 1.0000 |
| 14:24326077:A:AC | donor_gain | 1.0000 |
| 14:24326078:C:CC | donor_gain | 1.0000 |
| 14:24326078:CTT:C | donor_gain | 1.0000 |
| 14:24326080:T:TA | donor_gain | 1.0000 |
| 14:24329399:AC:A | donor_gain | 1.0000 |
| 14:24329400:CC:C | donor_gain | 1.0000 |
| 14:24329431:C:A | donor_gain | 1.0000 |
AlphaMissense
6931 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 14:24318688:C:G | R1016P | 1.000 |
| 14:24318694:G:T | A1014D | 1.000 |
| 14:24318699:G:C | N1012K | 1.000 |
| 14:24318699:G:T | N1012K | 1.000 |
| 14:24318714:C:A | W1007C | 1.000 |
| 14:24318714:C:G | W1007C | 1.000 |
| 14:24318716:A:G | W1007R | 1.000 |
| 14:24318716:A:T | W1007R | 1.000 |
| 14:24318721:T:A | D1005V | 1.000 |
| 14:24318725:A:C | Y1004D | 1.000 |
| 14:24318742:C:T | G998E | 1.000 |
| 14:24318743:C:A | G998W | 1.000 |
| 14:24318743:C:G | G998R | 1.000 |
| 14:24318743:C:T | G998R | 1.000 |
| 14:24319098:C:A | G986W | 1.000 |
| 14:24319379:A:C | Y931D | 1.000 |
| 14:24319395:C:A | K925N | 1.000 |
| 14:24319395:C:G | K925N | 1.000 |
| 14:24319746:T:A | D910V | 1.000 |
| 14:24319747:C:G | D910H | 1.000 |
| 14:24319770:A:G | L902P | 1.000 |
| 14:24319847:G:C | F876L | 1.000 |
| 14:24319847:G:T | F876L | 1.000 |
| 14:24319849:A:G | F876L | 1.000 |
| 14:24319854:A:T | V874D | 1.000 |
| 14:24322115:A:G | L846P | 1.000 |
| 14:24329522:A:T | I410N | 1.000 |
| 14:24329909:A:G | S390P | 1.000 |
| 14:24329910:C:A | W389C | 1.000 |
| 14:24329910:C:G | W389C | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000125361 (14:24321788 C>T), RS1000305647 (14:24336474 G>A), RS1000433857 (14:24321060 G>A), RS1000675087 (14:24319871 G>A), RS1001129793 (14:24336745 C>T), RS1001178411 (14:24331051 A>T), RS1001194282 (14:24331594 A>C,G), RS1001457310 (14:24334378 G>A,C), RS1001629291 (14:24318584 G>A,C), RS1002176704 (14:24319953 G>A,C,T), RS1002191902 (14:24328598 G>A,T), RS1002244467 (14:24334678 G>A,C,T), RS1002318248 (14:24323073 A>G), RS1002385213 (14:24325683 A>G), RS1002400325 (14:24331305 C>A,T)
Disease associations
OMIM: gene MIM:600292 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
3 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002371_1 | Parent of origin effect on language impairment (paternal) | 4.000000e-08 |
| GCST012227_602 | Hip circumference adjusted for BMI | 4.000000e-08 |
| GCST90000025_529 | Appendicular lean mass | 8.000000e-10 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0008039 | BMI-adjusted hip circumference |
| EFO:0004980 | appendicular lean mass |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL2097167 (PROTEIN FAMILY)
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — Adenylyl cyclases (ACs)
ChEMBL bioactivities
24 potent at pChembl≥5 of 24 total, top 24 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 9.06 | Ki | 0.88 | nM | CHEMBL3142312 |
| 8.77 | Ki | 1.7 | nM | CHEMBL3142318 |
| 8.77 | Ki | 1.7 | nM | CHEMBL3142332 |
| 8.72 | Ki | 1.9 | nM | CHEMBL3142329 |
| 8.60 | Ki | 2.5 | nM | CHEMBL3142331 |
| 8.59 | Ki | 2.6 | nM | CHEMBL2369777 |
| 8.41 | Ki | 3.9 | nM | CHEMBL2369525 |
| 8.38 | Ki | 4.2 | nM | CHEMBL2369778 |
| 8.11 | Ki | 7.8 | nM | CHEMBL3142313 |
| 7.85 | Ki | 14 | nM | CHEMBL66087 |
| 7.77 | Ki | 17 | nM | CHEMBL418135 |
| 7.70 | Ki | 20 | nM | CHEMBL293907 |
| 7.54 | Ki | 29 | nM | CHEMBL305151 |
| 7.48 | Ki | 33 | nM | CHEMBL62123 |
| 7.16 | Ki | 69 | nM | CHEMBL305151 |
| 7.15 | EC50 | 71 | nM | (R)-SKF-38393 |
| 6.96 | Ki | 110 | nM | CHEMBL62412 |
| 6.84 | Ki | 144 | nM | CHEMBL64475 |
| 6.59 | Ki | 254 | nM | CHEMBL62444 |
| 6.52 | Ki | 300 | nM | CHEMBL62892 |
| 6.50 | Ki | 317 | nM | CHEMBL64646 |
| 6.21 | Ki | 610 | nM | CHEMBL418468 |
| 6.00 | Ki | 1000 | nM | CHEMBL64955 |
| 5.28 | EC50 | 5200 | nM | CHEMBL57873 |
PubChem BioAssay actives
24 with measured affinity, of 52 total; 23 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (4R,7S,10S,13S,16S)-N-[(2R)-1-[[(2R)-1-amino-5-(diaminomethylideneamino)-1-oxopentan-2-yl]amino]-5-(diaminomethylideneamino)-1-oxopentan-2-yl]-7-(2-amino-2-oxoethyl)-13-benzyl-20,20-dicyclopentyl-16-[(4-ethoxyphenyl)methyl]-6,9,12,15,18-pentaoxo-10-propan-2-yl-1,2-dithia-5,8,11,14,17-pentazacycloicosane-4-carboxamide | 34311: Compound was evaluated for the inhibition constant for inhibition of 8-lysine-vasopressin stimulated adenylate cyclase of pig kidney medullary membrane | ki | 0.0009 | uM |
| (4R,7S,10S,13S,16S)-N-[(2S)-1-[[(2S)-1-amino-5-(diaminomethylideneamino)-1-oxopentan-2-yl]amino]-5-(diaminomethylideneamino)-1-oxopentan-2-yl]-7-(2-amino-2-oxoethyl)-13-benzyl-20,20-dicyclopentyl-16-[(4-ethoxyphenyl)methyl]-6,9,12,15,18-pentaoxo-10-propan-2-yl-1,2-dithia-5,8,11,14,17-pentazacycloicosane-4-carboxamide | 34311: Compound was evaluated for the inhibition constant for inhibition of 8-lysine-vasopressin stimulated adenylate cyclase of pig kidney medullary membrane | ki | 0.0017 | uM |
| (4R,7S,10S,13S,16S)-N-[(2S)-1-[[(2R)-1-amino-5-(diaminomethylideneamino)-1-oxopentan-2-yl]amino]-5-(diaminomethylideneamino)-1-oxopentan-2-yl]-7-(2-amino-2-oxoethyl)-13-benzyl-20,20-dicyclopentyl-16-[(4-ethoxyphenyl)methyl]-6,9,12,15,18-pentaoxo-10-propan-2-yl-1,2-dithia-5,8,11,14,17-pentazacycloicosane-4-carboxamide | 34311: Compound was evaluated for the inhibition constant for inhibition of 8-lysine-vasopressin stimulated adenylate cyclase of pig kidney medullary membrane | ki | 0.0017 | uM |
| (4R,7S,10S,13S,16S)-N-[(2R)-1-[[(2S)-1-amino-5-(diaminomethylideneamino)-1-oxopentan-2-yl]amino]-5-(diaminomethylideneamino)-1-oxopentan-2-yl]-7-(2-amino-2-oxoethyl)-13-benzyl-20,20-dicyclopentyl-16-[(4-ethoxyphenyl)methyl]-6,9,12,15,18-pentaoxo-10-propan-2-yl-1,2-dithia-5,8,11,14,17-pentazacycloicosane-4-carboxamide | 34311: Compound was evaluated for the inhibition constant for inhibition of 8-lysine-vasopressin stimulated adenylate cyclase of pig kidney medullary membrane | ki | 0.0019 | uM |
| (4R,7S,10S,13S,16S)-N-[(2S)-1-amino-5-(diaminomethylideneamino)-1-oxopentan-2-yl]-7-(2-amino-2-oxoethyl)-13-benzyl-20,20-dicyclopentyl-16-[(4-ethoxyphenyl)methyl]-6,9,12,15,18-pentaoxo-10-propan-2-yl-1,2-dithia-5,8,11,14,17-pentazacycloicosane-4-carboxamide | 34312: Compound was evaluated for the inhibition constant for inhibition of 8-lysine-vasopressin stimulated adenylate cyclase of pig kidney medullary membrane | ki | 0.0025 | uM |
| (4R,7S,10S,13S,16R)-7-(2-amino-2-oxoethyl)-13-benzyl-20,20-dicyclopentyl-N-[(2S)-5-(diaminomethylideneamino)-1-[[(2S)-1,6-diamino-1-oxohexan-2-yl]amino]-1-oxopentan-2-yl]-16-[(4-ethoxyphenyl)methyl]-6,9,12,15,18-pentaoxo-10-propan-2-yl-1,2-dithia-5,8,11,14,17-pentazacycloicosane-4-carboxamide | 34311: Compound was evaluated for the inhibition constant for inhibition of 8-lysine-vasopressin stimulated adenylate cyclase of pig kidney medullary membrane | ki | 0.0026 | uM |
| (2S)-N-[(2S)-1-amino-5-(diaminomethylideneamino)-1-oxopentan-2-yl]-1-[(4R,7S,10S,13S,16R)-7-(2-amino-2-oxoethyl)-13-benzyl-20,20-dicyclopentyl-16-[(4-ethoxyphenyl)methyl]-6,9,12,15,18-pentaoxo-10-propan-2-yl-1,2-dithia-5,8,11,14,17-pentazacycloicosane-4-carbonyl]pyrrolidine-2-carboxamide | 34311: Compound was evaluated for the inhibition constant for inhibition of 8-lysine-vasopressin stimulated adenylate cyclase of pig kidney medullary membrane | ki | 0.0039 | uM |
| (4R,7S,10S,13S,16R)-N-[(2S)-6-amino-1-[[(2S)-1-amino-5-(diaminomethylideneamino)-1-oxopentan-2-yl]amino]-1-oxohexan-2-yl]-7-(2-amino-2-oxoethyl)-13-benzyl-20,20-dicyclopentyl-16-[(4-ethoxyphenyl)methyl]-6,9,12,15,18-pentaoxo-10-propan-2-yl-1,2-dithia-5,8,11,14,17-pentazacycloicosane-4-carboxamide | 34311: Compound was evaluated for the inhibition constant for inhibition of 8-lysine-vasopressin stimulated adenylate cyclase of pig kidney medullary membrane | ki | 0.0042 | uM |
| (2S)-2-[[(2S)-2-[[(4R,7S,10S,13S,16S)-7-(2-amino-2-oxoethyl)-13-benzyl-20,20-dicyclopentyl-16-[(4-ethoxyphenyl)methyl]-6,9,12,15,18-pentaoxo-10-propan-2-yl-1,2-dithia-5,8,11,14,17-pentazacycloicosane-4-carbonyl]amino]-5-(diaminomethylideneamino)pentanoyl]amino]-5-(diaminomethylideneamino)pentanoic acid | 34311: Compound was evaluated for the inhibition constant for inhibition of 8-lysine-vasopressin stimulated adenylate cyclase of pig kidney medullary membrane | ki | 0.0078 | uM |
| 3-[[4-[1-[4-(2,4-dichlorophenyl)anilino]-1-oxooctan-2-yl]oxybenzoyl]amino]propanoic acid | 34294: In vitro inhibitory activity against glucagon induced human adenylate cyclase | ki | 0.0140 | uM |
| 3-[[4-[1-[4-(1-benzofuran-2-yl)anilino]-1-oxooctan-2-yl]oxybenzoyl]amino]propanoic acid | 34294: In vitro inhibitory activity against glucagon induced human adenylate cyclase | ki | 0.0170 | uM |
| 3-[[4-[2-[[4-(1-benzofuran-2-yl)phenyl]carbamoyl]octyl]benzoyl]amino]propanoic acid | 34294: In vitro inhibitory activity against glucagon induced human adenylate cyclase | ki | 0.0200 | uM |
| 3-[[4-[3-[4-(1-benzofuran-2-yl)anilino]-2-(4-tert-butylphenyl)-3-oxopropyl]benzoyl]amino]propanoic acid | 34296: In vitro inhibitory activity against glucagon induced human adenylate cyclase | ki | 0.0290 | uM |
| 3-[[4-[2-(4-tert-butylphenyl)-3-[4-(2,4-dichlorophenyl)anilino]-3-oxopropyl]benzoyl]amino]propanoic acid | 34296: In vitro inhibitory activity against glucagon induced human adenylate cyclase | ki | 0.0330 | uM |
| (5R)-5-phenyl-2,3,4,5-tetrahydro-1H-3-benzazepine-7,8-diol | 34592: Compound was tested for the adenylate cyclase stimulation | ec50 | 0.0710 | uM |
| 3-[[4-[2-(4-tert-butylphenyl)-3-oxo-3-[4-(trifluoromethoxy)anilino]propyl]benzoyl]amino]propanoic acid | 34296: In vitro inhibitory activity against glucagon induced human adenylate cyclase | ki | 0.1100 | uM |
| 3-[[4-[1-(4-tert-butylphenyl)-2-oxo-2-(4-phenylanilino)ethoxy]benzoyl]amino]propanoic acid | 34294: In vitro inhibitory activity against glucagon induced human adenylate cyclase | ki | 0.1440 | uM |
| 3-[[4-[[(4-tert-butylcyclohexyl)-[[4-(trifluoromethoxy)phenyl]carbamoyl]amino]methyl]benzoyl]amino]propanoic acid | 34294: In vitro inhibitory activity against glucagon induced human adenylate cyclase | ki | 0.2540 | uM |
| 3-[[4-[2-(4-tert-butylphenyl)-3-oxo-3-(4-phenylanilino)propyl]benzoyl]amino]propanoic acid | 34296: In vitro inhibitory activity against glucagon induced human adenylate cyclase | ki | 0.3000 | uM |
| 4-[1-(4-tert-butylphenyl)-2-oxo-2-(4-phenylanilino)ethoxy]-N-(2H-tetrazol-5-yl)benzamide | 34294: In vitro inhibitory activity against glucagon induced human adenylate cyclase | ki | 0.3170 | uM |
| 3-[[4-[2-(4-tert-butylphenyl)-3-oxo-3-(quinolin-3-ylamino)propyl]benzoyl]amino]propanoic acid | 34294: In vitro inhibitory activity against glucagon induced human adenylate cyclase | ki | 0.6100 | uM |
| 3-[[4-[2-(4-tert-butylphenyl)-3-[4-(hydroxymethyl)anilino]-3-oxopropyl]benzoyl]amino]propanoic acid | 34294: In vitro inhibitory activity against glucagon induced human adenylate cyclase | ki | 1.0000 | uM |
| 2,3,4,5-tetrahydro-1H-3-benzazepine-7,8-diol | 34592: Compound was tested for the adenylate cyclase stimulation | ec50 | 5.2000 | uM |
CTD chemical–gene interactions
26 total (human), top 26 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | decreases methylation, affects cotreatment, decreases expression | 2 |
| Air Pollutants | affects expression, increases abundance, increases expression | 2 |
| bisphenol F | affects cotreatment, decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| 2,5,2’,5’-tetrachlorobiphenyl | decreases expression | 1 |
| arsenite | increases methylation | 1 |
| perfluorooctanoic acid | affects expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| clothianidin | decreases expression | 1 |
| abrine | increases expression | 1 |
| perfluorobutanesulfonic acid | affects expression | 1 |
| bisphenol S | decreases expression, affects cotreatment | 1 |
| Benzo(a)pyrene | increases methylation | 1 |
| Dexamethasone | decreases expression, affects cotreatment | 1 |
| Doxorubicin | decreases expression | 1 |
| Indomethacin | affects cotreatment, decreases expression | 1 |
| Ozone | affects expression, increases abundance | 1 |
| Silicon Dioxide | increases expression | 1 |
| Tetrachlorodibenzodioxin | increases expression | 1 |
| Dronabinol | decreases expression | 1 |
| Tobacco Smoke Pollution | increases expression | 1 |
| Tretinoin | increases expression | 1 |
| Valproic Acid | increases methylation | 1 |
| 1-Methyl-3-isobutylxanthine | affects cotreatment, decreases expression | 1 |
| Particulate Matter | increases abundance, increases expression | 1 |
ChEMBL screening assays
16 unique, capped per target: 14 binding, 2 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3284336 | Binding | Agonist activity at adenylyl cyclase (unknown origin) at 1.35 x 10’-4 M | Synthesis of a fragment of human parathyroid hormore, hPTH-(44-68). — J Med Chem |
| CHEMBL645298 | Functional | In vitro antagonist activity was measured by inhibition of vasopressin-stimulated adenylate cyclase in renal medullary preparation in pig | Dicarbavasopressin antagonist analogues exhibit reduced in vivo agonist activity. — J Med Chem |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): specific language impairment 5