ADGRA1-AS1

Summary

ADGRA1-AS1 (ADGRA1 antisense RNA 1, HGNC:49543) is a long non-coding RNA gene on chromosome 10q26.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49543
Approved symbol	ADGRA1-AS1
Name	ADGRA1 antisense RNA 1
Location	10q26.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000256925
Ensembl biotype	lncRNA
Entrez	100128127
RNAcentral	URS000044FA74 — lncRNA, 475 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 9 lncRNA

ENST00000366099, ENST00000444433, ENST00000654383, ENST00000656946, ENST00000658362, ENST00000805858, ENST00000805859, ENST00000805860, ENST00000813526

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000366099 — 1 exons

Exon	Start	End
ENSE00001440881	133085256	133088491

Expression profiles

Bgee: expression breadth broad, 65 present calls, max score 74.97.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0532 / max 13.9984, expressed in 18 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
112091	0.0532	18

Top tissues by expression

65 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right frontal lobe	UBERON:0002810	74.97	gold quality
primary visual cortex	UBERON:0002436	74.85	gold quality
frontal cortex	UBERON:0001870	73.52	gold quality
superior frontal gyrus	UBERON:0002661	73.33	gold quality
anterior cingulate cortex	UBERON:0009835	73.05	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	72.74	gold quality
prefrontal cortex	UBERON:0000451	72.61	gold quality
cerebral cortex	UBERON:0000956	72.51	gold quality
Brodmann (1909) area 9	UBERON:0013540	72.42	gold quality
cortex of kidney	UBERON:0001225	72.05	gold quality
hypothalamus	UBERON:0001898	71.13	gold quality
right hemisphere of cerebellum	UBERON:0014890	70.94	gold quality
Ammon’s horn	UBERON:0001954	69.88	gold quality
temporal lobe	UBERON:0001871	69.62	gold quality
cerebellar hemisphere	UBERON:0002245	69.59	gold quality
amygdala	UBERON:0001876	69.50	gold quality
cerebellar cortex	UBERON:0002129	69.47	gold quality
cerebellum	UBERON:0002037	69.36	gold quality
substantia nigra	UBERON:0002038	66.94	gold quality
brain	UBERON:0000955	66.75	gold quality
ganglionic eminence	UBERON:0004023	63.49	gold quality
ventricular zone	UBERON:0003053	63.22	gold quality
multicellular organism	UBERON:0000468	60.77	gold quality
cortical plate	UBERON:0005343	60.34	gold quality
nucleus accumbens	UBERON:0001882	58.45	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	57.42	gold quality
skin of leg	UBERON:0001511	56.21	gold quality
pituitary gland	UBERON:0000007	56.20	gold quality
right adrenal gland cortex	UBERON:0035827	55.55	gold quality
left adrenal gland cortex	UBERON:0035825	55.45	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.30

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.