ADRA2B

gene
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Also known as ADRARL1

Summary

ADRA2B (adrenoceptor alpha 2B, HGNC:282) is a protein-coding gene on chromosome 2q11.2, encoding Alpha-2B adrenergic receptor (P18089). Alpha-2 adrenergic receptors are G protein-coupled receptors for catecholamines that activate G(i/o) protein pathway, thereby promoting adenylyl cyclase inhibition, ERK1/2 stimulation, and voltage-gated calcium channels suppression.

This intronless gene encodes a seven-pass transmembrane protein. This protein is a member of a subfamily of G protein-coupled receptors that regulate neurotransmitter release from sympathetic nerves and from adrenergic neurons in the central nervous system.

Source: NCBI Gene 151 — RefSeq curated summary.

At a glance

  • Gene–disease (curated): benign adult familial myoclonic epilepsy (Supportive, GenCC) — +3 more curated relationships
  • GWAS associations: 1
  • Clinical variants (ClinVar): 110 total — 8 pathogenic, 6 likely-pathogenic
  • Phenotypes (HPO): 8
  • Druggable target: yes — 316 molecules with ChEMBL bioactivity
  • MANE Select transcript: NM_000682

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:282
Approved symbolADRA2B
Nameadrenoceptor alpha 2B
Location2q11.2
Locus typegene with protein product
StatusApproved
AliasesADRARL1
Ensembl geneENSG00000274286
Ensembl biotypeprotein_coding
OMIM104260
Entrez151

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 protein_coding

ENST00000620793

RefSeq mRNA: 1 — MANE Select: NM_000682 NM_000682

CCDS: CCDS56129

Canonical transcript exons

ENST00000620793 — 1 exons

ExonStartEnd
ENSE000037442979611287696116571

Expression profiles

Bgee: expression breadth ubiquitous, 147 present calls, max score 85.18.

FANTOM5 (CAGE): breadth broad, TPM avg 1.8198 / max 132.1735, expressed in 347 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter IDTPM avgSamples expressed
297010.6831120
297030.6576223
297020.4791172

Top tissues by expression

282 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
apex of heartUBERON:000209885.18gold quality
tendon of biceps brachiiUBERON:000818885.06silver quality
gastrocnemiusUBERON:000138876.19gold quality
heart left ventricleUBERON:000208475.38gold quality
muscle of legUBERON:000138375.34gold quality
buccal mucosa cellCL:000233674.95gold quality
cardiac ventricleUBERON:000208274.76gold quality
right lobe of liverUBERON:000111472.15gold quality
spleenUBERON:000210672.08gold quality
type B pancreatic cellCL:000016971.91gold quality
lower esophagus muscularis layerUBERON:003583371.71gold quality
lower esophagusUBERON:001347371.62gold quality
metanephros cortexUBERON:001053371.53gold quality
cervix squamous epitheliumUBERON:000692271.51gold quality
omental fat padUBERON:001041471.17gold quality
peritoneumUBERON:000235871.12gold quality
adipose tissue of abdominal regionUBERON:000780870.79gold quality
muscle organUBERON:000163070.53gold quality
subcutaneous adipose tissueUBERON:000219070.07gold quality
hindlimb stylopod muscleUBERON:000425269.60gold quality
triceps brachiiUBERON:000150969.05gold quality
esophagogastric junction muscularis propriaUBERON:003584169.02gold quality
heartUBERON:000094868.97gold quality
tibial nerveUBERON:000132368.67gold quality
ascending aortaUBERON:000149668.12gold quality
tongue squamous epitheliumUBERON:000691967.89gold quality
thoracic aortaUBERON:000151567.74gold quality
squamous epitheliumUBERON:000691467.31gold quality
adipose tissueUBERON:000101367.12gold quality
connective tissueUBERON:000238466.77gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 1.

ExperimentMarker?Max mean expression
E-ANND-3yes3.88
E-CURD-53no34.92

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): SP1, STAT6, TFAP2A

miRNA regulators (miRDB)

81 targeting ADRA2B, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-3163100.0077.238605
HSA-MIR-4747-5P100.0067.902681
HSA-MIR-5196-5P100.0067.982761
HSA-MIR-4283100.0066.422097
HSA-MIR-6873-3P100.0071.422626
HSA-MIR-6748-5P100.0065.811057
HSA-MIR-6778-3P99.9667.292693
HSA-MIR-6825-5P99.9669.813431
HSA-MIR-145-5P99.9271.131836
HSA-MIR-5195-3P99.9270.921877
HSA-MIR-589-3P99.9169.622088
HSA-MIR-6794-5P99.7666.381048
HSA-MIR-3150A-3P99.7664.441640
HSA-MIR-6763-5P99.7664.681767
HSA-MIR-6764-5P99.7567.892304
HSA-MIR-6752-3P99.7266.711587
HSA-MIR-4716-3P99.6966.731022
HSA-MIR-7-5P99.6770.531809
HSA-MIR-6887-3P99.6667.831778
HSA-MIR-317599.6566.302031
HSA-MIR-182799.6368.573265
HSA-MIR-451699.6167.783390
HSA-MIR-613299.6065.831554
HSA-MIR-6836-5P99.6065.621538
HSA-MIR-6752-5P99.5967.321243
HSA-MIR-431099.5968.842527
HSA-MIR-1915-3P99.5866.791988
HSA-MIR-3136-3P99.5766.59781
HSA-MIR-7155-3P99.5766.48794
HSA-MIR-444199.4966.563216

Literature-anchored findings (GeneRIF, showing 40)

  • findings show that NPC1b is expressed in the midgut epithelium and is essential for growth during larval development; findings suggest that NPC1b plays an early role in sterol absorption (PMID:17339027)
  • Middle-aged white men carrying the DD genotype of the alpha(2B)-AR have a significantly increased risk for sudden cardiac death and myocardial infarction, especially before the age of 55 years. (PMID:12535806)
  • No major functional significance of the alpha(2B) adrenergic receptor polymorphism in the present sample of morbidly obese subjects was found. (PMID:12822042)
  • Alpha2-ARs in vascular smooth muscle cells reflect differential activity of alpha2-AR gene promoters. Alpha2C-ARs can be induced via p38 MAPK-dependent pathway. (PMID:12946937)
  • A polymorphism in the (alpha)2B adrenoceptor gene associates with hypertension. (PMID:14744925)
  • body fat response to exercise training in older adults is associated with the combined effects of the Glu12/Glu9 alpha2b-adrenergic receptor, Trp64Arg beta3-adrenergic receptor, and Gln27Glu beta2-adrenergic receptor gene variants (PMID:15166301)
  • The 12Glu9 polymorphism of ADRA2B is associated with impaired insulin secretion and may predict the development of Type 2 diabetes. (PMID:15309292)
  • ADRA2A and ADRA2B each had a single haplotype block at least 11 and 16 kb in size (PMID:15592690)
  • the del301-303 polymorphism of ADRA2B does not contribute significantly to interindividual in vivo variability in response to alpha2-AR activation in the hand vein (PMID:15864122)
  • analysis of stability of ADRA2B and binding to small molecules after detergent solubilization (PMID:15893292)
  • In Chinese men, the I allele of the ADRA2B gene is associated with higher blood pressure, but also with a more favourable metabolic phenotype. (PMID:16269962)
  • Multiple stepwise linear regression identified alpha2B genotype as an independent predictor of age at onset of type 2 diabetes. (PMID:17039423)
  • Leisure-time physical activity decreased the risk of type 2 diabetes in those with the 12Glu and 9Glu alleles of the ADRA2B gene. (PMID:17277585)
  • study showed that genotype distribution and the frequency of the alpha 2 beta adrenergic receptor alleles was not different in Greek women with polycystic ovary syndrome and controls (PMID:17370102)
  • alpha-2CDel AR appears to play only a minor role in presynaptic regulation of NA release and/or to be not hypofunctional in vivo in humans, but functional responsiveness of presynaptic alpha-2 AR declines with ageing. (PMID:17410123)
  • Evidence for an association of the D allele with both presence and severity of neuropathy in patients with type 2 diabetes mellitus. (PMID:17516297)
  • The decrease in intermuscular fat (IMF) in ADRalpha2bGlu9 carriers was significantly different from a nonsignificant increase in ADRalpha2bGlu9 noncarriers. (PMID:17595424)
  • main finding was that men with the DD polymorphism of the ADRA2B gene and job strain have significantly higher blood pressure than all other gene-work characteristics combinations (PMID:17620957)
  • {alpha}2-adrenergic receptor-mediated antilipolysis in human adipose tissue is inhibited by long chain fatty acids (PMID:17625217)
  • a deletion variant of ADRA2B, the gene encoding the alpha2b-adrenergic receptor, is related to enhanced emotional memory in healthy Swiss subjects and in survivors of the Rwandan civil war who experienced highly aversive emotional situations. (PMID:17660814)
  • These data indicate that alpha-2 adrenergic receptors contribute significantly to CBR-induced vasoconstriction in the human leg under resting conditions. (PMID:18054844)
  • A vascular smooth muscle cell line stably expressing the human alpha 2B-adrenoceptor was generated by transfection of rat cells (PMID:18456256)
  • we could not replicate the association of blood pressure and the metabolic phenotypes with ADRA2B I/D polymorphism (PMID:18596718)
  • The ADRA2B D allele is associated with a favorable anthropometric and metabolic profile in Chinese population. (PMID:18854756)
  • A variant of the ADRA2B gene is associated with essential hypertension with or without type 2 diabetes in Malaysian subjects. (PMID:18953403)
  • The alpha(2C) Del322-325 polymorphism exclusively or in combination with the beta(1)Arg389 allele is not associated with an increased risk of adverse events in HF. (PMID:19477404)
  • The I/D polymorphism is not consistently associated with metabolic syndrome and metabolic/anthropometric parameters but with diastolic blood pressure in an urban-based population of middle-aged Swedes. (PMID:19593211)
  • A novel polymorphism in the coding region of the human alpha-2B adrenergic receptor has been identified and demonstrated to affect receptor function. (PMID:19728989)
  • A functional deletion variant of ADRA2B is related to increased responsivity and connectivity of brain regions implicated in emotional memory. (PMID:19826083)
  • The ADRA2B 301-303 deletion allele (ins/del and del/del, n = 18) was associated with resistance to desensitization. (PMID:20051907)
  • carriage of the ADRA2B deletion abolished the relative memory impairment in homozygous COMT val158 carriers compared to met158 carriers. (PMID:20110158)
  • gene x exercise interactions were observed for A2BGlu9/12 and B2Gln27Glu on change in lean soft tissue (LST, p = 0.02); exercisers on the A2BGlu9- background gained LST compared to a loss among controls over 12 months (p\0.05) (PMID:20401689)
  • Data provide strong evidence indicating that Rab8 GTPase interacts with distinct motifs in the C termini of alpha(2B)-AR and beta(2)-AR and differentially modulates their traffic from the TGN to the cell surface. (PMID:20424170)
  • the findings of this study do not support a functional significance of ADRA2B indel polymorphism at position -4825 relative to the start codon in the far upstream region of the promoter in the present migraine subjects. (PMID:20651814)
  • Homozygote for insertion [I]/deletion allele of alpha(2B)-AR gene polymorphism is associated with silent myocardial ischemia in type 2 diabetes mellitus patients with coronary artery disease. (PMID:20692245)
  • The noradrenaline-mediated depolarization of vascular smooth muscle cells is produced by activation of both alpha(1)-and alpha(2)-adrenoceptors. (PMID:20739228)
  • Data do not show any association between the presence of the alpha2B-adrenergic receptor deletion allele and the occurrence of spontaneous abortions. (PMID:21159032)
  • the ADRA2B polymorphism influences emotional memory formation but not memory retrieval in the amygdala and left inferior frontal gyrus. (PMID:21259387)
  • Alpha2B-adrenergic receptor interaction with tubulin controls its transport from the endoplasmic reticulum to the cell surface (PMID:21357695)
  • The significant novel finding from this study is that the affective modulation of T2 detection is influenced by a non-additive (epistatic) interaction between the ADRA2B and 5-HTTLPR insertion/deletion polymorphisms. (PMID:21854681)

Cross-species orthologs

4 orthologs

OrganismSymbolGene ID
danio_rerioadra2bENSDARG00000102096
mus_musculusAdra2bENSMUSG00000058620
rattus_norvegicusAdra2bENSRNOG00000013887
caenorhabditis_elegansser-5WBGENE00008890

Paralogs (18): ADRB1 (ENSG00000043591), ADRA1A (ENSG00000120907), DRD2 (ENSG00000149295), ADRA2A (ENSG00000150594), GPR101 (ENSG00000165370), ADRB2 (ENSG00000169252), ADRA1B (ENSG00000170214), ADRA1D (ENSG00000171873), OR5T3 (ENSG00000172489), OR56A1 (ENSG00000180934), OR5T1 (ENSG00000181698), OR5T2 (ENSG00000181718), OR56A4 (ENSG00000183389), ADRA2C (ENSG00000184160), OR56A3 (ENSG00000184478), OR13F1 (ENSG00000186881), OR56A5 (ENSG00000188691), ADRB3 (ENSG00000188778)

Protein

Protein identifiers

Alpha-2B adrenergic receptorP18089 (reviewed: P18089)

Alternative names: Alpha-2 adrenergic receptor subtype C2, Alpha-2B adrenoreceptor

All UniProt accessions (1): P18089

UniProt curated annotations — full annotation on UniProt →

Function. Alpha-2 adrenergic receptors are G protein-coupled receptors for catecholamines that activate G(i/o) protein pathway, thereby promoting adenylyl cyclase inhibition, ERK1/2 stimulation, and voltage-gated calcium channels suppression. Control a variety of physiological processes, such as regulation of blood pressure, lipolysis and insulin release. The rank order of potency for agonists of ADRA2B is clonidine > norepinephrine > epinephrine = oxymetazoline > dopamine > p-tyramine = phenylephrine > serotonin > p-synephrine / p-octopamine. For antagonists, the rank order is yohimbine > chlorpromazine > phentolamine > mianserine > spiperone > prazosin > alprenolol > propanolol > pindolol.

Subunit / interactions. Interacts with RAB26; RAB26 mediates cell surface transport from the Golgi. Interacts with PPP1R9B. Interacts with GGA1, GGA2 and GGA3; GGA1, GGA2 and GGA3 mediates transport from the Golgi to the cell membrane. Interacts with RAB43 (GTP-bound); RAB43 mediates ADRA2B ER-to-Golgi cell transport.

Subcellular location. Cell membrane.

Disease relevance. Epilepsy, familial adult myoclonic, 2 (FAME2) [MIM:607876] A form of familial myoclonic epilepsy, a neurologic disorder characterized by cortical hand tremors, myoclonic jerks and occasional generalized or focal seizures with a non-progressive or very slowly progressive disease course. Usually, myoclonic tremor is the presenting symptom, characterized by tremulous finger movements and myoclonic jerks of the limbs increased by action and posture. In a minority of patients, seizures are the presenting symptom. Some patients exhibit mild cognitive impairment. FAME2 inheritance is autosomal dominant. The disease is caused by variants affecting the gene represented in this entry.

Polymorphism. A rare polymorphic frameshift in position 451 produces a protein of 545 residues.

Similarity. Belongs to the G-protein coupled receptor 1 family. Adrenergic receptor subfamily. ADRA2B sub-subfamily.

RefSeq proteins (1): NP_000673* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR000207ADRA2B_rcptFamily
IPR000276GPCR_RhodpsnFamily
IPR002233ADR_famFamily
IPR017452GPCR_Rhodpsn_7TMDomain

Pfam: PF00001

UniProt features (45 total): helix 10, topological domain 8, transmembrane region 7, sequence variant 6, compositionally biased region 3, site 3, region of interest 2, turn 2, chain 1, lipid moiety-binding region 1, disulfide bond 1, sequence conflict 1

Structure

Experimental structures (PDB)

2 structures.

PDBMethodResolution (Å)
6K41ELECTRON MICROSCOPY2.9
6K42ELECTRON MICROSCOPY4.1

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-P18089-F172.810.42

Antibody-complex structures (SAbDab): 26K41, 6K42

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Catalytic / active sites (3): 92 (implicated in ligand binding); 176 (implicated in catechol agonist binding); 180 (implicated in catechol agonist binding)

Post-translational modifications (1): 442

Disulfide bonds (1): 85–164

Function

Pathways and Gene Ontology

Reactome pathways

13 pathways

IDPathway
R-HSA-390696Adrenoceptors
R-HSA-392023Adrenaline signalling through Alpha-2 adrenergic receptor
R-HSA-418594G alpha (i) signalling events
R-HSA-418597G alpha (z) signalling events
R-HSA-109582Hemostasis
R-HSA-162582Signal Transduction
R-HSA-372790Signaling by GPCR
R-HSA-373076Class A/1 (Rhodopsin-like receptors)
R-HSA-375280Amine ligand-binding receptors
R-HSA-388396GPCR downstream signalling
R-HSA-500792GPCR ligand binding
R-HSA-76002Platelet activation, signaling and aggregation
R-HSA-76009Platelet Aggregation (Plug Formation)

MSigDB gene sets: 193 (showing top): MODULE_92, GGTGTGT_MIR329, GOBP_REGULATION_OF_BLOOD_PRESSURE, GOBP_CIRCULATORY_SYSTEM_PROCESS, REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION, REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION, REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS, GOBP_PLATELET_ACTIVATION, MODULE_64, GOBP_POSITIVE_REGULATION_OF_NEURON_DIFFERENTIATION, GOBP_REGULATION_OF_SMOOTH_MUSCLE_CONTRACTION, GOBP_POSITIVE_REGULATION_OF_MAPK_CASCADE, GOCC_CELL_SURFACE, GOBP_NEUROGENESIS, GOBP_CELL_CELL_SIGNALING

GO Biological Process (19): regulation of vascular associated smooth muscle contraction (GO:0003056), epidermal growth factor receptor signaling pathway (GO:0007173), G protein-coupled receptor signaling pathway (GO:0007186), adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (GO:0007193), cell-cell signaling (GO:0007267), female pregnancy (GO:0007565), negative regulation of norepinephrine secretion (GO:0010700), platelet activation (GO:0030168), negative regulation of epinephrine secretion (GO:0032811), positive regulation of MAPK cascade (GO:0043410), positive regulation of neuron differentiation (GO:0045666), positive regulation of blood pressure (GO:0045777), positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (GO:0051897), positive regulation of uterine smooth muscle contraction (GO:0070474), adrenergic receptor signaling pathway (GO:0071875), adenylate cyclase-inhibiting adrenergic receptor signaling pathway (GO:0071881), regulation of smooth muscle contraction (GO:0006940), signal transduction (GO:0007165), regulation of vasoconstriction (GO:0019229)

GO Molecular Function (5): alpha2-adrenergic receptor activity (GO:0004938), epinephrine binding (GO:0051379), G protein-coupled receptor activity (GO:0004930), adrenergic receptor activity (GO:0004935), protein binding (GO:0005515)

GO Cellular Component (4): cytosol (GO:0005829), plasma membrane (GO:0005886), cell surface (GO:0009986), membrane (GO:0016020)

Reactome top-level categories

Rollup of top-9 pathways:

CategoryPathways
GPCR downstream signalling2
Signaling by GPCR2
Amine ligand-binding receptors1
Platelet Aggregation (Plug Formation)1
Signal Transduction1
GPCR ligand binding1
Class A/1 (Rhodopsin-like receptors)1
Hemostasis1
Platelet activation, signaling and aggregation1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
cellular anatomical structure3
cell communication2
signaling2
negative regulation of catecholamine secretion2
positive regulation of intracellular signal transduction2
G protein-coupled receptor signaling pathway2
adrenergic receptor signaling pathway2
regulation of smooth muscle contraction1
vascular associated smooth muscle contraction1
regulation of vasoconstriction1
ERBB signaling pathway1
G protein-coupled receptor activity1
signal transduction1
adenylate cyclase-modulating G protein-coupled receptor signaling pathway1
adenylate cyclase inhibitor activity1
multi-organism reproductive process1
multi-multicellular organism process1
regulation of norepinephrine secretion1
norepinephrine secretion1
cell activation1
blood coagulation1
regulation of epinephrine secretion1
epinephrine secretion1
MAPK cascade1
regulation of MAPK cascade1
neuron differentiation1
positive regulation of cell differentiation1
regulation of neuron differentiation1
regulation of blood pressure1
phosphatidylinositol 3-kinase/protein kinase B signal transduction1
regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction1
positive regulation of smooth muscle contraction1
uterine smooth muscle contraction1
regulation of uterine smooth muscle contraction1
adrenergic receptor activity1
adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway1
regulation of muscle contraction1
smooth muscle contraction1
cellular process1
regulation of cellular process1

Protein interactions and networks

STRING

936 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
ADRA2BSEC24CP53992745
ADRA2BSEC24BO95487610
ADRA2BSLC6A4P31645580
ADRA2BSLC6A2P23975569
ADRA2BRAB8AP24407536
ADRA2BSEC24DO94855531
ADRA2BSLC6A3Q01959521
ADRA2BPTGS1P23219495
ADRA2BSEC24AO95486493
ADRA2BADRA1DP25100485
ADRA2BVWFP04275483
ADRA2BRBP3P10745481
ADRA2BDBHP09172460
ADRA2BADRA2AP08913453
ADRA2BPPP1R9BQ96SB3441

IntAct

17 interactions, top by confidence:

ABTypeScore
RAB26ADRA2Bpsi-mi:“MI:0915”(physical association)0.630
RAB26ADRA2Bpsi-mi:“MI:2364”(proximity)0.630
ADRA2BRAB26psi-mi:“MI:0915”(physical association)0.630
ADRA2BRAB26psi-mi:“MI:0407”(direct interaction)0.630
ACKR3ADRA2Bpsi-mi:“MI:2364”(proximity)0.420
ACKR3ADRA2Bpsi-mi:“MI:0914”(association)0.420
ADRA2BSH3GL1psi-mi:“MI:0915”(physical association)0.400
SH3GL2ADRA2Bpsi-mi:“MI:0915”(physical association)0.400
ADRA2BGGA2psi-mi:“MI:0915”(physical association)0.400
ADRA2BRAMP1psi-mi:“MI:0915”(physical association)0.400
RAMP2ADRA2Bpsi-mi:“MI:0915”(physical association)0.400
ADRA2BRAMP3psi-mi:“MI:0915”(physical association)0.400
RAMP3ADRA2Bpsi-mi:“MI:0915”(physical association)0.400

BioGRID (9): GOLGA4 (Co-localization), GGA3 (Affinity Capture-Western), GGA3 (Reconstituted Complex), GGA2 (Affinity Capture-Western), GGA1 (Reconstituted Complex), GGA2 (Reconstituted Complex), EIF2B1 (Reconstituted Complex), ADRA2B (Reconstituted Complex), UCHL1 (Reconstituted Complex)

ESM2 similar proteins: O02662, O02666, O19025, O19032, O19054, O77721, O77830, P07700, P08588, P08913, P11615, P15823, P18089, P18090, P18825, P18841, P18871, P19328, P22086, P22909, P23944, P25100, P25115, P25962, P26255, P30545, P34971, P35368, P43141, P47899, P79148, P97714, P97717, Q01337, Q01338, Q17239, Q28838, Q28927, Q28998, Q60474

Diamond homologs: A0A287A2K5, C8YUV0, O00155, O02836, O08786, O15973, O18935, O19012, O19014, O19025, O19032, O19054, O19091, O62729, O77408, O77700, O77721, O77830, O97665, O97772, P04761, P08482, P0C5I1, P11229, P12657, P17200, P18089, P19328, P22270, P25021, P30545, P30551, P30552, P30553, P30796, P32211, P32238, P32239, P32302, P46627

SIGNOR signaling

17 interactions.

AEffectBMechanism
ADRA2B“up-regulates activity”GNAI1binding
ADRA2B“up-regulates activity”GNAI3binding
ADRA2B“up-regulates activity”GNAO1binding
ADRA2B“up-regulates activity”GNAZbinding
ADRA2B“up-regulates activity”GNA12binding
(R)-noradrenaline“up-regulates activity”ADRA2B“chemical activation”
brimonidine“up-regulates activity”ADRA2B“chemical activation”
clonidine“up-regulates activity”ADRA2B“chemical activation”
dexmedetomidine“up-regulates activity”ADRA2B“chemical activation”
Guanabenz“up-regulates activity”ADRA2B“chemical activation”
tolazoline“down-regulates activity”ADRA2B“chemical inhibition”
oxymetazoline“up-regulates activity”ADRA2B“chemical activation”
Guanfacine“up-regulates activity”ADRA2B“chemical activation”
N-(2,6-dimethylphenyl)-5,6-dihydro-4H-1,3-thiazin-2-amine“up-regulates activity”ADRA2B“chemical activation”
zotepine“down-regulates activity”ADRA2B“chemical inhibition”
lofexidine“up-regulates activity”ADRA2B“chemical activation”

Disease & clinical

Clinical variants and AI predictions

ClinVar

110 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic8
Likely pathogenic6
Uncertain significance73
Likely benign16
Benign4

Top pathogenic / likely-pathogenic (14)

Variant IDHGVSClassification
144712GRCh38/hg38 2q11.1-11.2(chr2:95879602-97029672)x1Pathogenic
146017GRCh38/hg38 2q11.2(chr2:96073560-97062710)x1Pathogenic
154733GRCh38/hg38 2q11.2(chr2:96073560-97513144)x1Pathogenic
4755375GRCh38/hg38 2q11.1-11.2(chr2:95875947-97355895)x1Pathogenic
57434GRCh38/hg38 2q11.2(chr2:96100812-97285797)x1Pathogenic
57543GRCh38/hg38 2q11.1-11.2(chr2:95879602-97285797)x1Pathogenic
687873GRCh37/hg19 2q11.1-11.2(chr2:96552903-98118115)x1Pathogenic
997821Single allelePathogenic
2664653NM_000682.7(ADRA2B):c.116C>T (p.Thr39Ile)Likely pathogenic
443435GRCh37/hg19 2q11.1-11.2(chr2:96468158-97871906)x3Likely pathogenic
4682540GRCh37/hg19 2p11.2-q11.2(chr2:85898497-97671333)x3Likely pathogenic
545284NC_000002.12:g.(?96063558)(97079140_?)delLikely pathogenic
562641GRCh37/hg19 2q11.1-11.2(chr2:96735977-98258828)x1Likely pathogenic
814283GRCh37/hg19 2q11.1-11.2(chr2:96712139-98254657)x1Likely pathogenic

SpliceAI

184 predictions. Top by Δscore:

VariantEffectΔscore
2:96115000:A:Tacceptor_gain0.8800
2:96115001:G:GTacceptor_gain0.8700
2:96114997:ACCAG:Aacceptor_gain0.7600
2:96114998:CCAGC:Cacceptor_gain0.7600
2:96115003:A:ATacceptor_gain0.7500
2:96114387:A:Cacceptor_gain0.6700
2:96114198:G:Tacceptor_gain0.6000
2:96115528:TGGG:Tdonor_gain0.6000
2:96114197:C:CTacceptor_gain0.5900
2:96114983:G:GTacceptor_gain0.5700
2:96114999:C:CTacceptor_gain0.5500
2:96114980:G:Cacceptor_gain0.5300
2:96114991:AGGGG:Aacceptor_gain0.5300
2:96114795:G:GAdonor_gain0.5100
2:96114986:G:Aacceptor_gain0.5100
2:96114984:A:AAacceptor_gain0.5000
2:96114985:A:AAacceptor_gain0.5000
2:96114802:A:Tdonor_gain0.4900
2:96114995:GAACC:Gacceptor_gain0.4900
2:96114996:AACCA:Aacceptor_gain0.4900
2:96114798:C:Tdonor_gain0.4600
2:96114197:C:Tacceptor_gain0.4300
2:96114366:CTCTT:Cacceptor_gain0.4300
2:96114367:TCTTT:Tacceptor_gain0.4300
2:96114376:G:Cacceptor_gain0.4300
2:96114387:A:ACacceptor_gain0.4300
2:96115006:G:GTacceptor_gain0.4300
2:96115531:G:Tdonor_gain0.4300
2:96115119:A:ACdonor_gain0.4200
2:96113870:C:CCacceptor_gain0.4100

AlphaMissense

2882 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
2:96114882:G:TP423H1.000
2:96114884:G:CN422K1.000
2:96114884:G:TN422K1.000
2:96114896:G:CN418K1.000
2:96114896:G:TN418K1.000
2:96115010:A:CF380L1.000
2:96115010:A:TF380L1.000
2:96115012:A:GF380L1.000
2:96115829:G:CS107R1.000
2:96115829:G:TS107R1.000
2:96115831:T:GS107R1.000
2:96115977:T:AD58V1.000
2:96115977:T:GD58A1.000
2:96114851:G:CF433L0.999
2:96114851:G:TF433L0.999
2:96114853:A:GF433L0.999
2:96114874:A:GY426H0.999
2:96114876:A:TI425N0.999
2:96114879:A:TV424D0.999
2:96114882:G:CP423R0.999
2:96114883:G:AP423S0.999
2:96114886:T:CN422D0.999
2:96114893:G:CS419R0.999
2:96114893:G:TS419R0.999
2:96114895:T:GS419R0.999
2:96114906:C:TG415D0.999
2:96114913:A:GW413R0.999
2:96114913:A:TW413R0.999
2:96115000:A:GW384R0.999
2:96115000:A:TW384R0.999

dbSNP variants (sampled 300 via entrez): RS1000048230 (2:96118322 T>C), RS1000169652 (2:96117940 A>G,T), RS1000231137 (2:96113141 C>A), RS1001121437 (2:96114160 C>T), RS1001171412 (2:96117650 G>A), RS1001213142 (2:96117894 A>C), RS1001221137 (2:96112554 C>T), RS1001936074 (2:96118018 G>A), RS1002009905 (2:96118360 A>G), RS1002523091 (2:96113478 A>G), RS1003290232 (2:96116731 A>G), RS1004486876 (2:96115159 G>A), RS1004732207 (2:96115998 A>C), RS1004815866 (2:96114964 T>C), RS1005803581 (2:96116634 A>G)

Disease associations

OMIM: gene MIM:104260 | disease phenotypes: MIM:607876, MIM:181500

GenCC curated gene-disease

DiseaseClassificationInheritance
benign adult familial myoclonic epilepsySupportiveAutosomal dominant
epilepsy, familial adult myoclonic, 2LimitedUnknown
neurodevelopmental disorderLimitedAutosomal recessive
epilepsyRefuted EvidenceAutosomal dominant

ClinGen Gene-Disease Validity (1)

Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.

DiseaseClassificationInheritance
epilepsyRefutedAD

Mondo (6): epilepsy, familial adult myoclonic, 2 (MONDO:0011930), schizophrenia (MONDO:0005090), intellectual disability (MONDO:0001071), epilepsy (MONDO:0005027), benign adult familial myoclonic epilepsy (MONDO:0019448), neurodevelopmental disorder (MONDO:0700092)

Orphanet (3): Familial adult myoclonic epilepsy (Orphanet:86814), NON RARE IN EUROPE: Schizophrenia (Orphanet:3140), NON RARE IN EUROPE: Unexplained intellectual disability (Orphanet:319658)

HPO phenotypes

8 total (9 of 8 shown, HPO-id order):

HPOTerm
HP:0001249Intellectual disability
HP:0001336Myoclonus
HP:0002197Generalized-onset seizure
HP:0002315Headache
HP:0002353EEG abnormality
HP:0002378Hand tremor
HP:0007359Focal-onset seizure
HP:0100576Amaurosis fugax
HP:0100753Schizophrenia

GWAS associations

1 associations (top):

StudyTraitp-value
GCST90002394_125Monocyte percentage of white cells2.000000e-13

EFO canonical traits (1, from GWAS)

EFO IDTrait name
EFO:0007989monocyte percentage of leukocytes

MeSH disease descriptors (4)

DescriptorNameTree numbers
D004827EpilepsyC10.228.140.490
D008607Intellectual DisabilityC10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539
D065886Neurodevelopmental DisordersF03.625
C564313Epilepsy, Myoclonic, Benign Adult Familial, Type 2 (supp.)

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (4): CHEMBL1942 (SINGLE PROTEIN), CHEMBL2095158 (PROTEIN FAMILY), CHEMBL2095203 (PROTEIN FAMILY), CHEMBL2331074 (PROTEIN FAMILY)

Molecules with ChEMBL bioactivity

316 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 688,166 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

MoleculeNamePhasePatents
CHEMBL1008BEPRIDIL411,776
CHEMBL1014CANDESARTAN CILEXETIL411,194
CHEMBL104CLOTRIMAZOLE456,325
CHEMBL1064SIMVASTATIN4123,163
CHEMBL1065METHYSERGIDE48,455
CHEMBL1079TIZANIDINE412,099
CHEMBL1083659SUVOREXANT4852
CHEMBL1085ACETOPHENAZINE45,134
CHEMBL11IMIPRAMINE448,893
CHEMBL1108DROPERIDOL416,888
CHEMBL111RIMONABANT415,726
CHEMBL1112ARIPIPRAZOLE424,205
CHEMBL1113AMOXAPINE420,128
CHEMBL1117IDARUBICIN4136,065
CHEMBL1171837PONATINIB48,955
CHEMBL1172DESLORATADINE419,720
CHEMBL1173655AFATINIB415,144
CHEMBL1175DULOXETINE428,527
CHEMBL118CELECOXIB4112,844
CHEMBL1194666DIETHYLPROPION412,073
CHEMBL1200406DIMENHYDRINATE4
CHEMBL1200492NEFAZODONE HYDROCHLORIDE4
CHEMBL1200517DIHYDROERGOTAMINE MESYLATE4
CHEMBL1200809AZELASTINE HYDROCHLORIDE4
CHEMBL1201THIOTHIXENE4
CHEMBL1201039BENZTHIAZIDE4
CHEMBL1201087CABERGOLINE4
CHEMBL1201203BENZTROPINE4
CHEMBL1201210PROPIOMAZINE4
CHEMBL1201216DAPIPRAZOLE4

PharmGKB: 1 entry (VIP=true, CPIC=false)

PharmGKB variants

2 variants.

VariantGenesLevelScore#Clin annotsDrugs
rs29000568ADRA2B0.000
rs3813662ADRA2B0.000

GtoPdb / IUPHAR curated pharmacology

(IUPHAR/BPS Guide to Pharmacology — expert-curated)

Target class: gpcr — Adrenoceptors

Most potent curated ligand interactions (45 total), top 25:

LigandActionAffinityParameter
dexmedetomidineFull agonist10.9pIC50
lisurideAntagonist9.9pKi
tergurideAntagonist9.4pKi
[3H]rauwolscineAntagonist9.2pKd
[3H]MK-912Antagonist8.9pKd
spiroxatrineAntagonist8.8pKi
RX821002Antagonist8.7pKi
atipamezoleAntagonist8.6pKi
RS79948Antagonist8.6pKi
yohimbineAntagonist8.4pKi
A-1262543Partial agonist8.4pEC50
WB 4101Antagonist8.4pKi
chlorpromazineAntagonist8.3pKi
rauwolscineAntagonist8.3pKi
roxindoleAntagonist8.3pKi
zotepineAntagonist8.2pKi
MK-912Antagonist8.2pKi
phentolamineAntagonist8.2pKi
[125I]p-iodoclonidinePartial agonist8.1pKd
[3H]RX821002Antagonist8.1pKd
guanabenzAgonist7.9pEC50
ARC-239Antagonist7.7pKi
idazoxanAntagonist7.6pKi
guanfacineFull agonist7.6pEC50
bromocriptineAntagonist7.5pKi

Binding affinities (BindingDB)

62 measured of 97 human assays (118 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.

LigandMeasureValuePatent
NSC_104911KI0.1 nM
roxindoleKI0.11 nM
3,3-diethyl-1-[(4R,7R)-6-methyl-6,11-diazatetracyclo[7.6.1.0^{2,7}.0^{12,16}]hexadeca-1(15),2,9,12(16),13-pentaen-4-yl]ureaKI0.15 nM
MK-912KI0.42 nM
2-Chlor-11-(2-dimethylaminoaethoxy)-dibenzo(b,f)-thiepinKI0.5 nM
8-(2,3-Dihydro-benzo[1,4]dioxin-2-ylmethyl)-1-phenyl-1,3,8-triaza-spiro[4.5]decan-4-oneKI1 nM
5-[2-(4-Benzo[d]isothiazol-3-yl-piperazin-1-yl)-ethyl]-6-chloro-1,3-dihydro-indol-2-oneKI1.9 nM
PermaxKI1.91 nM
4-[4-(4-Chloro-phenyl)-4-hydroxy-piperidin-1-yl]-1-(4-fluoro-phenyl)-butan-1-one;propionate(HCl)KI2.92 nM
(S)-mianserinKI3 nM
TergurideKI3.47 nM
S18616KI3.98 nM
naphtalineKI4.57 nM
NSC_121850KI5.68 nM
p-AMINOCLONIDINEKI7.94 nM
CAS_67249-51-8KI7.94 nM
Bromocriptine+ (GTP+)KI12.9 nM
CAS_81447-78-1KI14.4 nM
NSC_54746KI19.9 nM
1-(4-{3-[4-(6-Fluoro-benzo[d]isoxazol-3-yl)-piperidin-1-yl]-propoxy}-3-methoxy-phenyl)-ethanoneKI33 nM
Fluorocarazolol,(S)KI34 nM
NSC_3519KI50.3 nM
cid_3396KI56 nM
CHEMBL297827KI102 nM
CHEMBL48341KI141 nM
2-[4-[3-[2-(trifluoromethyl)phenothiazin-10-yl]propyl]piperazin-1-yl]ethanol;hydrochlorideKI146 nM
CAS_105182-45-4KI158 nM
(R)-5-(1-(2,3-dimethylphenyl)ethyl)-1H-imidazoleKI200 nM
S32504KI257 nM
4-[2-(dipropylamino)ethyl]-1,3-dihydro-2H-indol-2-oneKI288 nM
SMR000033635KI300 nM
NSC_133621KI316 nM
CAS_22189-31-7KI410 nM
4-[3-(2-chlorophenothiazin-10-yl)propyl]-1-piperazineethanolKI421 nM
NSC_4850KI447 nM
CAS_85760-74-3IC50462 nMUS-9359372: Hexahydrodibenzo[a,g]quinolizine compound, preparation method thereof, pharmaceutical composition and use thereof
(chloropromazine) [3-(2-Chloro-phenothiazin-10-yl)-propyl]-dimethyl-amineKI480 nM
ST 91KI575 nM
1-(1-(4,4-bis(4-fluorophenyl)butyl)piperidin-4-yl)-1H-benzo[d]imidazol-2(3H)-oneKI650 nM
IdazoxanKI662 nM
PramipexoleKI692 nM
cid_2913535KI950 nM
SR 147778KI1000 nM
NSC_1576KI1000 nM
1-[2-[4-[5-chloro-1-(4-fluorophenyl)-indol-3-yl]-1-piperidyl]ethyl]imidazolidin-2-oneKI1050 nM
rilmenidineKI1580 nM
2-(3-(5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxo-4H-chromen-8-yl)-4-hydroxyphenyl)-5,7-dihydroxy-4H-chromen-4-oneIC501630 nM
B-HT 920KI1700 nM
7-{4-[4-(2,3-dichlorophenyl)piperazin-1-yl]butoxy}-3,4-dihydroquinolin-2(1H)-oneEC501880 nMUS-10174011: Heterocyclic compounds, process for preparation of the same and use thereof
CAS_24221-86-1KI2000 nM

ChEMBL bioactivities

1500 potent at pChembl≥5 of 1645 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
10.85IC500.014nMCHEMBL553231
10.80IC500.016nMCHEMBL557985
10.47IC500.034nMCHEMBL537830
10.00Ki0.1nMRAUWOLSCINE
9.96Ki0.1096nMCHEMBL1256414
9.94Ki0.1148nMCHEMBL1256414
9.92IC500.12nMCHEMBL538801
9.74Ki0.182nMCHEMBL1255723
9.70Kd0.1995nMCHEMBL279807
9.70Kd0.1995nMCHEMBL62912
9.69Ki0.2042nMCHEMBL1256378
9.62Ki0.237nMLISURIDE
9.60IC500.25nMCHEMBL194837
9.60Ki0.2512nMCHEMBL5517941
9.60Ki0.25nMCHEMBL50390
9.59EC500.26nMCHEMBL49137
9.59IC500.26nMCHEMBL554581
9.56Ki0.2754nMCHEMBL1256414
9.52Ki0.3nMRAUWOLSCINE
9.46Ki0.3467nMCHEMBL1255724
9.40Ki0.4nMYOHIMBINE
9.40Ki0.4nMRAUWOLSCINE
9.30EC500.5nMASCORBIC ACID
9.30AC500.5nMCEFEPIME
9.29IC500.518nMLISURIDE
9.22Ki0.6nMYOHIMBINE
9.21IC500.61nMCHEMBL164540
9.20Kd0.631nMCHEMBL25554
9.16Ki0.6918nMCHEMBL1256609
9.11Ki0.786nMPIPAMAZINE
9.10Ki0.8nMRAUWOLSCINE
9.09Ki0.82nMCHEMBL4755913
9.05Ki0.9nMYOHIMBINE
9.04Ki0.912nMCHEMBL10332
9.04Ki0.912nMCHEMBL1255771
9.02IC500.955nMCHEMBL351483
8.94Ki1.16nMYOHIMBINE
8.94Ki1.148nMCHEMBL1255770
8.92Ki1.2nMRAUWOLSCINE
8.92Ki1.2nMCHEMBL298936
8.92EC501.2nMCHEMBL298936
8.90IC501.259nMCHEMBL163247
8.89IC501.3nMCHEMBL189118
8.89Ki1.3nMRAUWOLSCINE
8.89Ki1.3nMCHEMBL49137
8.87IC501.349nMCHEMBL165350
8.86Ki1.396nMERGOCORNINE
8.85Ki1.413nMCHEMBL10332
8.85Ki1.413nMBRIMONIDINE
8.85AC501.4nMASENAPINE

PubChem BioAssay actives

1009 with measured affinity, of 3338 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
Naphazoline Hydrochloride36185: Compound was evaluated for Adrenergic activity against Alpha-2 adrenergic receptor in human plateletsic50<0.0001uM
5-(1-naphthalen-1-ylethyl)-1H-imidazole;hydrochloride36187: Compound was tested for Adrenergic activity against Alpha-2 adrenergic receptor from rat aortaic50<0.0001uM
2-(1-naphthalen-2-ylethyl)-4,5-dihydro-1H-imidazole;hydrochloride36185: Compound was evaluated for Adrenergic activity against Alpha-2 adrenergic receptor in human plateletsic50<0.0001uM
2-(naphthalen-1-ylmethyl)-1H-imidazole;hydrochloride36185: Compound was evaluated for Adrenergic activity against Alpha-2 adrenergic receptor in human plateletsic50<0.0001uM
2-(1-naphthalen-1-ylethyl)-4,5-dihydro-1H-imidazole;hydrochloride36185: Compound was evaluated for Adrenergic activity against Alpha-2 adrenergic receptor in human plateletsic50<0.0001uM
5-(1-naphthalen-2-ylethyl)-1H-imidazole;hydrochloride36185: Compound was evaluated for Adrenergic activity against Alpha-2 adrenergic receptor in human plateletsic500.0001uM
5-[(1aR,6aR)-1a,6-dihydro-1H-cyclopropa[a]inden-6a-yl]-1H-imidazole516908: Displacement of [3H]-RX821002 from human adrenergic alpha2B receptor expressed in rat C6 cells after 120 mins by liquid scintillation countingki0.0001uM
methyl (1S,15S,18S,19S,20S)-18-hydroxy-1,3,11,12,14,15,16,17,18,19,20,21-dodecahydroyohimban-19-carboxylate36340: Compound was evaluated for inhibition of binding of [3H]rauwolscine to Alpha-2 adrenergic receptor in opossum kidneyki0.0001uM
3-methoxy-12-methylsulfonyl-5,6,8,8a,9,10,11,12a,13,13a-decahydroisoquinolino[2,1-g][1,6]naphthyridine80588: Ability to reverse inhibitory effects of UK-14304 on the contraction of guinea pig ileum as a measure of alpha-2 adrenergic receptor antagonism.kd0.0002uM
5-[(1S,1aR,6aS)-1-methyl-1a,6-dihydro-1H-cyclopropa[a]inden-6a-yl]-1H-imidazole516908: Displacement of [3H]-RX821002 from human adrenergic alpha2B receptor expressed in rat C6 cells after 120 mins by liquid scintillation countingki0.0002uM
5-[(1S,1aR,6aS)-1-ethyl-1a,6-dihydro-1H-cyclopropa[a]inden-6a-yl]-1H-imidazole516908: Displacement of [3H]-RX821002 from human adrenergic alpha2B receptor expressed in rat C6 cells after 120 mins by liquid scintillation countingki0.0002uM
(8aR,12aR,13aS)-3-methoxy-12-methylsulfonyl-5,6,8,8a,9,10,11,12a,13,13a-decahydroisoquinolino[2,1-g][1,6]naphthyridine80588: Ability to reverse inhibitory effects of UK-14304 on the contraction of guinea pig ileum as a measure of alpha-2 adrenergic receptor antagonism.kd0.0002uM
2-(2,4-dichlorophenoxy)-N-[2-[2-(dimethylamino)ethoxy]-4-methylquinolin-6-yl]acetamide254838: Inhibitory concentration against alpha-2 adrenergic receptoric500.0003uM
(3R)-5-chlorospiro[2,4-dihydro-1H-naphthalene-3,2’-5H-1,3-oxazole]-4’-amine2065718: Binding affinity to human alpha2B-adrenoceptorki0.0003uM
N-(4,5-dihydro-1H-imidazol-2-yl)-5-methylquinoxalin-6-amine36513: Compound was tested for concentration that produced 50% contractile response relative to maximum response to norepinephrine for Alpha-2 adrenergic receptor in rabbit vas deferensec500.0003uM
2-(1-naphthalen-1-ylethyl)-1H-imidazole;hydrochloride36185: Compound was evaluated for Adrenergic activity against Alpha-2 adrenergic receptor in human plateletsic500.0003uM
5-[(1S,1aR,6aS)-1-propyl-1a,6-dihydro-1H-cyclopropa[a]inden-6a-yl]-1H-imidazole516908: Displacement of [3H]-RX821002 from human adrenergic alpha2B receptor expressed in rat C6 cells after 120 mins by liquid scintillation countingki0.0003uM
Yohimbine36499: Compound was evaluated for inhibition of binding of [3H]yohimbine to Alpha-2 adrenergic receptor in opossum kidneyki0.0004uM
3-[(6aR,9S)-7-methyl-6,6a,8,9-tetrahydro-4H-indolo[4,3-fg]quinolin-9-yl]-1,1-diethylurea2060761: Ray2010 Assay 74 from Article : “Psychedelics and the human receptorome.”ki0.0005uM
ascorbic acid416324: Agonist activity at human adrenergic alpha2B receptor expressed in HEK293 cells coexpressing Gqi5 protein by FLIPR assayec500.0005uM
2-(1-naphthalen-2-ylethyl)-1H-imidazole;oxalic acid36185: Compound was evaluated for Adrenergic activity against Alpha-2 adrenergic receptor in human plateletsic500.0006uM
N-(2,3-dihydro-1,4-benzodioxin-3-ylmethyl)-2-(2,6-dimethoxyphenoxy)ethanamine1123560: Binding affinity to alpha-adrenergic receptor (unknown origin) in central nervous systemkd0.0006uM
5-[(1aR,6S,6aR)-6-methyl-1a,6-dihydro-1H-cyclopropa[a]inden-6a-yl]-1H-imidazole516908: Displacement of [3H]-RX821002 from human adrenergic alpha2B receptor expressed in rat C6 cells after 120 mins by liquid scintillation countingki0.0007uM
1-[4-[[4-(4,5-dihydro-1H-imidazol-2-ylamino)phenyl]methyl]phenyl]-2-propylguanidine;dihydrochloride1728108: Displacement of [3H]-RX821002 from adrenergic alpha 2 receptor in human brain membrane by liquid scintillation spectroscopyki0.0008uM
2-(3-methoxy-2H-1,4-benzodioxin-3-yl)-4,5-dihydro-1H-imidazole297456: Displacement of [3H]RX821002 from adrenergic alpha2 receptor in human brain frontal cortexki0.0009uM
5-[(1aR,6aR)-1a-methyl-1,6-dihydrocyclopropa[a]inden-6a-yl]-1H-imidazole516908: Displacement of [3H]-RX821002 from human adrenergic alpha2B receptor expressed in rat C6 cells after 120 mins by liquid scintillation countingki0.0009uM
7-chloro-3-[2-(3,4-dihydro-1H-[1]benzofuro[3,2-c]pyridin-2-yl)ethyl]-2-methylpyrido[1,2-a]pyrimidin-4-one35399: Binding affinity at human Alpha-2B adrenergic receptor in CHO cells by [3H]rauwolscine (1 nM) displacement.ic500.0010uM
5-[(1aR,6aR)-1,1-dimethyl-1a,6-dihydrocyclopropa[a]inden-6a-yl]-1H-imidazole516908: Displacement of [3H]-RX821002 from human adrenergic alpha2B receptor expressed in rat C6 cells after 120 mins by liquid scintillation countingki0.0011uM
N-(4,5-dihydro-1H-imidazol-2-yl)-5-methyl-3,4-dihydro-2H-1,4-benzoxazin-6-amine36513: Compound was tested for concentration that produced 50% contractile response relative to maximum response to norepinephrine for Alpha-2 adrenergic receptor in rabbit vas deferensec500.0012uM
7,9-dichloro-3-[2-(3,4-dihydro-1H-[1]benzofuro[3,2-c]pyridin-2-yl)ethyl]-2-methylpyrido[1,2-a]pyrimidin-4-one35399: Binding affinity at human Alpha-2B adrenergic receptor in CHO cells by [3H]rauwolscine (1 nM) displacement.ic500.0013uM
7-bromo-3-[2-(3,4-dihydro-1H-[1]benzofuro[3,2-c]pyridin-2-yl)ethyl]-2-methylpyrido[1,2-a]pyrimidin-4-one35399: Binding affinity at human Alpha-2B adrenergic receptor in CHO cells by [3H]rauwolscine (1 nM) displacement.ic500.0013uM
(E)-N-[2-[2-(dimethylamino)ethyl-methylamino]-4-methylquinolin-6-yl]-3-[4-(trifluoromethoxy)phenyl]prop-2-enamide254838: Inhibitory concentration against alpha-2 adrenergic receptoric500.0013uM
Brimonidine368170: Binding affinity to alpha2 adrenoceptor in human cortical membraneki0.0014uM
(3R,3aS)-3-[[4-[(E)-3-(4-fluorophenyl)-2-methylprop-2-enyl]piperazin-1-yl]methyl]-7,8-dimethoxy-3a,4-dihydro-3H-chromeno[4,3-c][1,2]oxazole288095: Displacement of [3H]rawolscine from human cloned adrenergic alpha-2B receptor transfected in CHO cellski0.0015uM
3-[2-(3,4-dihydro-1H-[1]benzofuro[3,2-c]pyridin-2-yl)ethyl]-2,7-dimethylpyrido[1,2-a]pyrimidin-4-one35399: Binding affinity at human Alpha-2B adrenergic receptor in CHO cells by [3H]rauwolscine (1 nM) displacement.ic500.0015uM
3-[2-(3,4-dihydro-1H-[1]benzofuro[3,2-c]pyridin-2-yl)ethyl]-2,6-dimethylpyrido[1,2-a]pyrimidin-4-one35399: Binding affinity at human Alpha-2B adrenergic receptor in CHO cells by [3H]rauwolscine (1 nM) displacement.ic500.0015uM
N-(2,6-dichloro-4-iodophenyl)-4,5-dihydro-1H-imidazol-2-amine36188: Inhibition of [3H]p-aminoclonidine (PAC) binding to alpha-2 adrenergic receptor of purified human platelet plasma membranesic500.0015uM
N-[4-[[4-(4,5-dihydro-1H-imidazol-2-ylamino)phenyl]methyl]phenyl]-4,5-dihydro-1H-imidazol-2-amine1728108: Displacement of [3H]-RX821002 from adrenergic alpha 2 receptor in human brain membrane by liquid scintillation spectroscopyki0.0016uM
5-[(1aR,6S,6aS)-6-ethyl-1a,6-dihydro-1H-cyclopropa[a]inden-6a-yl]-1H-imidazole516908: Displacement of [3H]-RX821002 from human adrenergic alpha2B receptor expressed in rat C6 cells after 120 mins by liquid scintillation countingki0.0016uM
N-pyridin-4-ylisoquinolin-4-amine2065718: Binding affinity to human alpha2B-adrenoceptorki0.0017uM
3-[2-(3,4-dihydro-1H-[1]benzofuro[3,2-c]pyridin-2-yl)ethyl]-9-hydroxy-2-methylpyrido[1,2-a]pyrimidin-4-one35399: Binding affinity at human Alpha-2B adrenergic receptor in CHO cells by [3H]rauwolscine (1 nM) displacement.ic500.0017uM
1-[4-[[4-(4,5-dihydro-1H-imidazol-2-ylamino)phenyl]methyl]phenyl]-2-(furan-2-ylmethyl)guanidine;dihydrochloride1728108: Displacement of [3H]-RX821002 from adrenergic alpha 2 receptor in human brain membrane by liquid scintillation spectroscopyki0.0018uM
Risperidone36197: Binding affinity towards human alpha-2 adrenergic receptorki0.0018uM
Apraclonidine36512: Compound was tested for concentration that produced 50% contractile relative response to maximum response to norepinephrine for Alpha-2 adrenergic receptorec500.0019uM
9-chloro-3-[2-(3,4-dihydro-1H-[1]benzofuro[3,2-c]pyridin-2-yl)ethyl]-2-methyl-7-(trifluoromethyl)pyrido[1,2-a]pyrimidin-4-one35399: Binding affinity at human Alpha-2B adrenergic receptor in CHO cells by [3H]rauwolscine (1 nM) displacement.ic500.0019uM
5-[(1aR,6aS)-spiro[1,1a-dihydrocyclopropa[a]indene-6,1’-cyclopropane]-6a-yl]-1H-imidazole516908: Displacement of [3H]-RX821002 from human adrenergic alpha2B receptor expressed in rat C6 cells after 120 mins by liquid scintillation countingki0.0019uM
Dexmedetomidine2065729: Agonist activity at alpha2B-adrenoceptor (unknown origin) expressed in U2OS-EGFP-NFAT2-alpha2B-AR cells assessed as increase in intracellular calcium level measured after 15 mins incubation by Micro automated microscopyec500.0019uM
3-[2-(3,4-dihydro-1H-[1]benzofuro[3,2-c]pyridin-2-yl)ethyl]-9-methoxy-2-methylpyrido[1,2-a]pyrimidin-4-one35399: Binding affinity at human Alpha-2B adrenergic receptor in CHO cells by [3H]rauwolscine (1 nM) displacement.ic500.0020uM
3-[[4-[(E)-3-phenylprop-2-enyl]piperazin-1-yl]methyl]-3a,4-dihydro-3H-chromeno[4,3-c][1,2]oxazole36227: In vitro binding affinity towards human alpha-2B adrenergic receptor using [3H]rauwolscineki0.0020uM
3-[2-(3,4-dihydro-1H-[1]benzofuro[3,2-c]pyridin-2-yl)ethyl]-7-iodo-2-methylpyrido[1,2-a]pyrimidin-4-one35399: Binding affinity at human Alpha-2B adrenergic receptor in CHO cells by [3H]rauwolscine (1 nM) displacement.ic500.0021uM

CTD chemical–gene interactions

31 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
sodium arseniteincreases expression2
Epinephrinedecreases reaction, increases expression, increases reaction, increases phosphorylation, affects binding (+2 more)2
aristolochic acid Iincreases expression1
bisphenol Aincreases expression1
xylometazolineaffects binding, increases activity, increases abundance, decreases reaction1
butyraldehydeincreases expression1
S-(1,2-dichlorovinyl)cysteineincreases expression, affects cotreatment, decreases expression, affects response to substance1
pentanalincreases expression1
2-methoxyidazoxanaffects binding, decreases reaction1
licochalcone Bincreases expression1
theaflavin-3,3’-digallateaffects expression1
Resveratrolaffects cotreatment, decreases expression1
Sunitinibincreases expression1
Arsenic Trioxidedecreases expression1
Acetaminophendecreases expression1
Air Pollutantsincreases expression, increases abundance1
Benzo(a)pyrenedecreases expression1
Cadmiumincreases expression1
Calciumaffects binding, increases abundance, increases activity1
Clonidineaffects binding, increases activity1
Diethylhexyl Phthalatedecreases expression1
Lipopolysaccharidesdecreases expression, affects response to substance, increases expression, affects cotreatment1
Norepinephrineincreases activity, increases abundance, decreases reaction, affects binding1
Oxymetazolineaffects binding, increases activity, increases abundance, decreases reaction1
Plant Extractsaffects cotreatment, decreases expression1
Triclosandecreases expression1
Valproic Acidincreases methylation1
1-Methyl-4-phenylpyridiniumincreases expression1
Aflatoxin B1increases methylation1
Cadmium Chlorideincreases expression1

ChEMBL screening assays

596 unique, capped per target: 466 binding, 123 functional, 5 admet, 2 unclassified

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL1016575BindingDisplacement of [3H]RS79948-197 from human recombinant adrenergic alpha2B receptor expressed in CHO cellsAlpha2-adrenoreceptors profile modulation. 4. From antagonist to agonist behavior. — J Med Chem
CHEMBL1016576FunctionalAntagonist activity at human recombinant adrenergic alpha2B receptor expressed in CHO cellsAlpha2-adrenoreceptors profile modulation. 4. From antagonist to agonist behavior. — J Med Chem
CHEMBL1738037UnclassifiedPUBCHEM_BIOASSAY: Late-stage radioligand binding dose response assay to identify inhibitors of NADPH oxidase 1 (NOX1): PDSP screen Ki Set 2. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID1792, AID1796, AID182PubChem BioAssay data set

Cellosaurus cell lines

6 cell lines: 3 spontaneously immortalized cell line, 3 cancer cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_9114L-NGC-alpha2B L-cellsSpontaneously immortalized cell lineMale
CVCL_B8B0Abcam HCT 116 ADRA2B KOCancer cell lineMale
CVCL_B9D2Abcam A-549 ADRA2B KOCancer cell lineMale
CVCL_D2DTAbcam MCF-7 ADRA2B KOCancer cell lineFemale
CVCL_H391CHO-K1/ADRA2B/Gqi5Spontaneously immortalized cell lineFemale
CVCL_KW27PathHunter CHO-K1 ADRA2B beta-arrestinSpontaneously immortalized cell lineFemale

Clinical trials (associated diseases)

600 trials via MONDO — disease-level, not drug-specific.

TrialPhaseStatusTitle
NCT00004637PHASE4COMPLETEDDouble-Blind, Placebo-Controlled Trial of Vitamin E as Add-on Therapy for Children With Epilepsy
NCT00043914PHASE4COMPLETEDMeasurement Of Serum Levels Of Two Antiepileptic Drugs During Conversion In Patients With Epilepsy
NCT00132223PHASE4UNKNOWNEffects on the Diagnostic Accuracy of Magnetic Imaging Angiographies of the Supra-Aortic Vessels by Three Different Magnetic Resonance Contrast Agents in Patients
NCT00133081PHASE4UNKNOWNStudy to Improve the Treatment of Epilepsy (SITE)
NCT00137709PHASE4UNKNOWNHormone Profiles in Adults With Newly Diagnosed Epilepsy
NCT00154076PHASE4COMPLETEDA Multicenter Comparative Trial of Zonisamide and Topiramate as Initial Monotherapy in Untreated Epilepsies
NCT00165828PHASE4TERMINATEDEfficacy and Safety of an add-on Treatment With Zonisamide in Adults With Focal Epileptic Seizures With or Without Secondary Generalization
NCT00181116PHASE4COMPLETEDLevetiracetam for Benign Rolandic Epilepsy
NCT00207935PHASE4COMPLETEDUse of Sustained Release Antiepileptic Medication (Depakote® ER) for Pediatric Epilepsy in a Mental Retardation/Developmental Disorder Population
NCT00215592PHASE4COMPLETEDOpen Label, Zonegran (Zonisamide) In Partial Onset Seizures
NCT00266604PHASE4COMPLETEDA Study to Evaluate the Dosing, Effectiveness and Safety of Topiramate for the Treatment of Epilepsy
NCT00288639PHASE4COMPLETEDLyrica (Pregabalin) Administered as an Add-on Therapy for Partial Seizures (LEADER).
NCT00312676PHASE4UNKNOWNCompare Tolerability of an Overnight Switch to Gradual Switch Between Two Different Forms of Depakote
NCT00323947PHASE4COMPLETEDMethylphenidate for Treating Attention Deficit Hyperactivity Disorder in Children With Both ADHD and Epilepsy
NCT00385411PHASE4COMPLETEDStudy of Valproate in Young Patients Suffering From Epilepsy
NCT00522418PHASE4TERMINATEDStudy Comparing Best Medical Practice With or Without VNS Therapy in Pharmacoresistant Partial Epilepsy Patients
NCT00537940PHASE4COMPLETEDComparative Study Of Pregabalin And Gabapentin As Adjunctive Therapy In Subjects With Partial Seizures
NCT00552526PHASE4UNKNOWNKetogenic Diet vs.Antiepileptic Drug Treatment in Drug Resistant Epilepsy
NCT00564915PHASE4COMPLETEDRCT of the Efficacy of the Ketogenic Diet in the Treatment of Epilepsy
NCT00571155PHASE4COMPLETEDTrial of Levetiracetam in Patients With Primary Brain Tumors and Symptomatic Seizures Who Undergo Surgery
NCT00572195PHASE4COMPLETEDRNS® System LTT Study
NCT00610532PHASE4TERMINATEDEvaluating the Transporter Protein Inhibitor Probenecid In Patients With Epilepsy
NCT00630357PHASE4COMPLETEDTrial to Evaluate the Safety and Efficacy of Keppra After Conversion to Mono-therapy in Subjects With Partial Epilepsy
NCT00630630PHASE4COMPLETEDStudy on Safety and Efficacy of Levetiracetam in the Adjunctive Treatment of Female Subjects With C1 Catamenial Epilepsy
NCT00630968PHASE4COMPLETEDS.K.A.T.E.: Safety of Keppra as Adjunctive Therapy in Epilepsy
NCT00631150PHASE4COMPLETEDA Phase IV-Pharmacovigilance Study of Keppra Greece - S.K.A.T.E.: Safety of Keppra as Adjunctive Therapy in Epilepsy
NCT00659958PHASE4COMPLETEDZAGAL Study: Evaluating Effectiveness and Tolerability of Zonisamide as Adjunctive Therapy in Patients With Partial Onset Seizures Treated With Two Antiepileptic Drugs
NCT00713622PHASE4COMPLETEDComparing The Effect On Cognition Of Adjunctive Therapy With Zonisamide Versus Sodium Valproate
NCT00807989PHASE4COMPLETEDThe Efficacy and Safety of Low Dose Combination of LTG and VPA Compared to CBZ Monotherapy
NCT00832884PHASE4COMPLETEDThe Safety of Intravenous Lacosamide
NCT00869622PHASE4COMPLETEDAntiepileptic Drugs and Osteoporotic Prevention Trial
NCT00896987PHASE4COMPLETEDLamotrigine Cognitive Function Study in Adult Untreated Epilepsies
NCT00952081PHASE4COMPLETEDA Pilot Study to Evaluate Efficacy and Safety of Clevidipine in Neurosurgical Patients
NCT01118455PHASE4TERMINATEDTrial to Assess Vagus Nerve Stimulation Therapy vs. Anti-Epileptic Drug (AED) Treatment in Children With Refractory Seizures
NCT01127165PHASE4COMPLETEDLow and High Dose Zonisamide in Children as Monotherapy
NCT01127256PHASE4COMPLETEDComparative Study of Zonisamide and Carbamazepine as an Initial Monotherapy: Efficacy and Safety Evaluation
NCT01140867PHASE4COMPLETEDOpen-label, Multi-center Trial of Zonisamide as Adjunctive Therapy in Patients With Uncontrolled Partial Epilepsy
NCT01175954PHASE4COMPLETEDCognitive and Behavioral Effects of Lacosamide
NCT01229735PHASE4COMPLETEDLevetiracetam Versus Topiramate as Adjunctive Therapy to Evaluate Efficacy and Safety in Subjects With Refractory Partial Onset Seizures
NCT01244724PHASE4TERMINATEDLexapro for Major Depression in Patients With Epilepsy