ADRM1
gene geneOn this page
Also known as GP110Rpn13ARM1PSMD16
Summary
ADRM1 (ADRM1 26S proteasome ubiquitin receptor, HGNC:15759) is a protein-coding gene on chromosome 20q13.33, encoding Proteasomal ubiquitin receptor ADRM1 (Q16186). Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. It is a selective cancer dependency (DepMap: 35.8% of cell lines).
This gene encodes a member of the adhesion regulating molecule 1 protein family. The encoded protein is a component of the proteasome where it acts as a ubiquitin receptor and recruits the deubiquitinating enzyme, ubiquitin carboxyl-terminal hydrolase L5. Increased levels of the encoded protein are associated with increased cell adhesion, which is likely an indirect effect of this intracellular protein. Dysregulation of this gene has been implicated in carcinogenesis. Alternative splicing results in multiple transcript variants.
Source: NCBI Gene 11047 — RefSeq curated summary.
At a glance
- GWAS associations: 1
- Clinical variants (ClinVar): 84 total — 1 pathogenic
- Druggable target: yes — 2 molecules with ChEMBL bioactivity
- Cancer dependency (DepMap): dependent in 35.8% of screened cell lines
- MANE Select transcript:
NM_007002
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:15759 |
| Approved symbol | ADRM1 |
| Name | ADRM1 26S proteasome ubiquitin receptor |
| Location | 20q13.33 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | GP110, Rpn13, ARM1, PSMD16 |
| Ensembl gene | ENSG00000130706 |
| Ensembl biotype | protein_coding |
| OMIM | 610650 |
| Entrez | 11047 |
Gene structure
Transcript identifiers
Ensembl transcripts: 38 — 37 protein_coding, 1 protein_coding_CDS_not_defined
ENST00000253003, ENST00000462554, ENST00000465805, ENST00000491935, ENST00000620230, ENST00000906311, ENST00000906312, ENST00000906313, ENST00000906314, ENST00000906315, ENST00000906316, ENST00000906317, ENST00000906318, ENST00000906319, ENST00000906320, ENST00000906321, ENST00000906322, ENST00000906323, ENST00000906324, ENST00000906326, ENST00000906327, ENST00000906328, ENST00000906329, ENST00000906330, ENST00000913435, ENST00000913436, ENST00000913437, ENST00000913438, ENST00000913439, ENST00000913440, ENST00000913441, ENST00000913442, ENST00000913443, ENST00000913444, ENST00000913445, ENST00000946004, ENST00000946005, ENST00000946006
RefSeq mRNA: 4 — MANE Select: NM_007002
NM_001281437, NM_001281438, NM_007002, NM_175573
CCDS: CCDS13496, CCDS74747
Canonical transcript exons
ENST00000253003 — 10 exons
| Exon | Start | End |
|---|---|---|
| ENSE00003605128 | 62306197 | 62306320 |
| ENSE00003789475 | 62306648 | 62306734 |
| ENSE00003846646 | 62302997 | 62303049 |
| ENSE00003888697 | 62307596 | 62307828 |
| ENSE00003889186 | 62304461 | 62304577 |
| ENSE00003890387 | 62308368 | 62308470 |
| ENSE00003891605 | 62308021 | 62308178 |
| ENSE00003893481 | 62307371 | 62307452 |
| ENSE00003894119 | 62303568 | 62303781 |
| ENSE00003895466 | 62308655 | 62308862 |
Expression profiles
Bgee: expression breadth ubiquitous, 269 present calls, max score 98.65.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 74.6747 / max 489.2355, expressed in 1824 samples.
FANTOM5 promoters (8 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 185717 | 73.4509 | 1824 |
| 185713 | 0.8831 | 419 |
| 185714 | 0.2174 | 86 |
| 185718 | 0.0371 | 9 |
| 185716 | 0.0362 | 9 |
| 185719 | 0.0313 | 8 |
| 185720 | 0.0100 | 4 |
| 185715 | 0.0086 | 3 |
Top tissues by expression
288 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| gastrocnemius | UBERON:0001388 | 98.65 | gold quality |
| right testis | UBERON:0004534 | 98.22 | gold quality |
| left testis | UBERON:0004533 | 98.20 | gold quality |
| muscle of leg | UBERON:0001383 | 97.91 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 97.72 | gold quality |
| apex of heart | UBERON:0002098 | 97.42 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 97.16 | gold quality |
| right adrenal gland | UBERON:0001233 | 97.10 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 97.09 | gold quality |
| lower esophagus | UBERON:0013473 | 97.08 | gold quality |
| skin of leg | UBERON:0001511 | 97.06 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 97.05 | gold quality |
| left adrenal gland | UBERON:0001234 | 97.01 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 96.99 | gold quality |
| mucosa of stomach | UBERON:0001199 | 96.97 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 96.93 | gold quality |
| cerebellar cortex | UBERON:0002129 | 96.92 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 96.89 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 96.83 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 96.82 | gold quality |
| granulocyte | CL:0000094 | 96.77 | gold quality |
| skin of abdomen | UBERON:0001416 | 96.76 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 96.74 | gold quality |
| left coronary artery | UBERON:0001626 | 96.64 | gold quality |
| popliteal artery | UBERON:0002250 | 96.64 | gold quality |
| tibial artery | UBERON:0007610 | 96.64 | gold quality |
| right atrium auricular region | UBERON:0006631 | 96.60 | gold quality |
| left uterine tube | UBERON:0001303 | 96.50 | gold quality |
| right coronary artery | UBERON:0001625 | 96.47 | gold quality |
| right lobe of liver | UBERON:0001114 | 96.39 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-124263 | yes | 802.28 |
| E-GEOD-134144 | yes | 27.84 |
| E-ENAD-17 | no | 177.80 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
13 targeting ADRM1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-19A-3P | 99.98 | 75.33 | 2762 |
| HSA-MIR-19B-3P | 99.98 | 75.44 | 2754 |
| HSA-MIR-8087 | 99.90 | 69.55 | 1351 |
| HSA-MIR-6756-5P | 99.82 | 67.97 | 2466 |
| HSA-MIR-6766-5P | 99.68 | 67.70 | 2325 |
| HSA-MIR-7161-5P | 99.68 | 68.92 | 1592 |
| HSA-MIR-548U | 99.65 | 67.78 | 1463 |
| HSA-MIR-1207-5P | 99.49 | 69.11 | 2983 |
| HSA-MIR-6799-5P | 99.14 | 65.72 | 2093 |
| HSA-MIR-4763-3P | 99.10 | 67.83 | 2649 |
| HSA-MIR-4483 | 98.09 | 64.12 | 1642 |
| HSA-MIR-4736 | 97.96 | 65.89 | 1287 |
| HSA-MIR-194-3P | 97.36 | 65.96 | 1027 |
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 35.8% of screened cell lines.
Literature-anchored findings (GeneRIF, showing 40)
- ARM-1 is a cytosolic protein associated with the plasma membrane. However, no cell surface expression of the protein was observed. These results suggest an indirect role of ARM-1 in adhesion rather than a direct role as an adhesion molecule itself.[ARM-1] (PMID:15819879)
- Adrm1 has a specialised role in proteasome function. Identified Adrm1 as a novel component of the regulatory ATPase complex of the 26 S proteasome (PMID:16815440)
- Neither Uch37 alone nor the Uch37-Adrm1 or Uch37-Adrm1-S1 complexes can hydrolyse di-ubiquitin efficiently; rather, incorporation into the 19S complex is required to enable processing of polyubiquitin chains. (PMID:16906146)
- These results indicate that hRpn13 (Adrm1) is essential for the activity of UCH37. (PMID:16990800)
- In human 26S proteasomes, hRpn13 appears to be important for the binding of UCH37 to the 19S complex and for efficient proteolysis. (PMID:17139257)
- identification of a new ubiquitin receptor, Rpn13/ARM1, a known component of the proteasome (PMID:18497817)
- ADRM1 overexpression was the most highly correlated with amplification and is associated with ovarian cancer. (PMID:18615678)
- Adrm1 is potentially oncogenic and may play an important role in colon tumorigenesis (PMID:19148532)
- these data suggest that Adrm1, a new Atp6v0d2-interacting protein, plays an important role in osteoclast differentiation, and in particular the fusion of preosteoclasts. (PMID:19818731)
- Silencing of Adrm1 by RNA interference can significantly suppress proliferation of colorectal cancer cells through inducing apoptosis and arresting the cell cycle. (PMID:20137344)
- results suggest that there is different substrate specificity between S5a and hRpn13 at the level of delivery and S5a may be the major docking site for ERAD substrates. (PMID:20417181)
- Rpn13 binding to the proteasome scaffolding protein hRpn2/S1 abrogates its interdomain interactions, thus activating hRpn13 for ubiquitin binding. (PMID:20471946)
- show that Rpn13 is involved in inducible nitric oxide synthase degradation and is required for iNOS interaction with the deubiquitination protein UCH37. (PMID:20634424)
- Phosphorylated TP63 induces transcription of RPN13, leading to NOS2 protein degradation (PMID:20959455)
- In tumor cells non-phosphorylated DeltaNp63alpha failed to form protein complexes with Rpn13, allowing the latter to bind and target LKB1 into a proteasome-dependent degradation pathway, modulating cisplatin-induced autophagy. (PMID:21191146)
- this study provides a possible mechanism of action in ovarian cancer for amplification and overexpression of ADRM1 (PMID:21432940)
- hRpn13 modulates the influence of osteoblasts on osteoclasts by controlling the stability of regulatory proteins in osteoblasts. (PMID:22057889)
- mRNA and protein levels of ADRM1 were increased in hepatocellular carcinoma tissues and was parallel to the metastatic potential (PMID:22576803)
- Inherent asymmetry in the 26S proteasome is defined by the ubiquitin receptor RPN13. (PMID:24429290)
- Autoubiquitination of the 26S proteasome on Rpn13 regulates breakdown of ubiquitin conjugates. (PMID:24811749)
- Together, our findings suggest that the interaction of Psmd1 with Adrm1 is controlled by SUMOylation in a manner that may alter proteasome composition and function. (PMID:24910440)
- ADRM1 is a candidate target gene in the chromosome 20q13.33 amplicon that may possibly be linked to development of gastric cancer (PMID:24968865)
- findings implicate Rpn13 in linking parkin to the 26 S proteasome and regulating the clearance of mitochondrial proteins during mitophagy (PMID:25666615)
- Data show that DEUBAD domain in RPN13 (ADRM1) activates ubiquitin thioesterase L5 (UCH-L5), and the related DEUBAD domain in INO80G (NFRKB) inhibits UCH-L5. (PMID:25702870)
- Data suggest that ADRM1 is involved in proliferation of acute leukemia cells; expression of ADRM1 is up-regulated in leukemia; knockdown of ADRM1 inhibits cell proliferation at G0/G1 phase of cell cycle but does not affect apoptosis/cell migration. (PMID:25896055)
- the binding of SGTA to Rpn13 enables specific polypeptides to escape proteasomal degradation and/or selectively modulates substrate degradation. (PMID:26169395)
- regulation of NY-ESO-1 processing by the ubiquitin receptors Rpn10 and Rpn13 as a well as by the standard and immunoproteasome is governed by non-canonical ubiquitination on non-lysine sites. (PMID:26903513)
- this work implicates hRpn13 and Uch37 in cell cycle progression, providing a rationale for their function in cellular proliferation and for the apoptotic effect of the hRpn13-targeting molecule RA190. (PMID:26907685)
- The structures of proteasome substrate receptor complexes with the shuttle factors that deliver ubiquitinated proteins to proteasomes have been solved, namely human Rpn13 complexed with PLIC2 and Saccharomyces cerevisiae Rpn1 with Rad23. (PMID:27396824)
- evidence that the interaction can mediate the association of Rpn13 and SGTA in a cellular context. (PMID:27827410)
- RPN13 binds ubiquitin with an affinity similar to that of other proteasome-associated ubiquitin receptors and that RPN2, ubiquitin, and the deubiquitylase UCH37 bind to RPN13 with independent energetics. (PMID:28442575)
- Rpn13-Rpn2 complex structural analysis shows that RA190 targets hRpn13 and Uch37 through parallel mechanisms and at proteasomes, RA190-inactivated Uch37 cannot disassemble hRpn13-bound ubiquitin chains (PMID:28598414)
- We show that ADRM1 mRNA overexpression is an early event in high grade serous carcinoma of the ovary. This is associated with TP53 mutation and increased burden of misfolded proteins in carcinomas that likely renders the cancer cells particularly sensitive to RPN13 inhibitors. (PMID:28784174)
- findings indicate that up-regulated ADRM1 was involved in intrahepatic cholangiocarcinoma (ICC) progression and suggest the potential clinical application of ADRM1 inhibitors (e.g., RA190 and KDT-11) for ICC treatment. (PMID:29913454)
- Prognostic and Therapeutic Significance of Adhesion-regulating Molecule 1 in Estrogen Receptor-positive Breast Cancer. (PMID:31669266)
- An Extended Conformation for K48 Ubiquitin Chains Revealed by the hRpn2:Rpn13:K48-Diubiquitin Structure. (PMID:32160516)
- The CCDC43-ADRM1 axis regulated by YY1, promotes proliferation and metastasis of gastric cancer. (PMID:32278016)
- Proteomic analysis identifies mechanism(s) of overcoming bortezomib resistance via targeting ubiquitin receptor Rpn13. (PMID:32424294)
- ADRM1 as a therapeutic target in hepatocellular carcinoma. (PMID:32916039)
- Identification of novel anti-tumor therapeutic target via proteomic characterization of ubiquitin receptor ADRM1/Rpn13. (PMID:33441535)
Cross-species orthologs
7 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | adrm1 | ENSDARG00000058560 |
| mus_musculus | Adrm1 | ENSMUSG00000039041 |
| mus_musculus | Adrm1b | ENSMUSG00000042165 |
| rattus_norvegicus | Adrm1 | ENSRNOG00000055984 |
| drosophila_melanogaster | Rpn13R | FBGN0029745 |
| drosophila_melanogaster | Rpn13 | FBGN0033886 |
| caenorhabditis_elegans | WBGENE00016981 |
Protein
Protein identifiers
Proteasomal ubiquitin receptor ADRM1 — Q16186 (reviewed: Q16186)
Alternative names: 110 kDa cell membrane glycoprotein, Adhesion-regulating molecule 1, Proteasome regulatory particle non-ATPase 13, Rpn13 homolog
All UniProt accessions (3): Q16186, A0A087WUX6, A0A087WX59
UniProt curated annotations — full annotation on UniProt →
Function. Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair. Within the complex, functions as a proteasomal ubiquitin receptor. Engages and activates 19S-associated deubiquitinases UCHL5 and PSMD14 during protein degradation. UCHL5 reversibly associate with the 19S regulatory particle whereas PSMD14 is an intrinsic subunit of the proteasome lid subcomplex.
Subunit / interactions. Component of the 19S proteasome regulatory particle complex. The 26S proteasome consists of a 20S core particle (CP) and two 19S regulatory subunits (RP). Interacts with the proteasomal scaffolding protein PSMD1. Interacts with deubiquitinase UCHL5; this interaction activates the auto-inhibited UCHL5 by deoligomerizing it. Interacts with UBQLN2 and ubiquitin.
Subcellular location. Cytoplasm. Nucleus.
Post-translational modifications. Ubiquitinated by UBE3C in response to proteotoxic stress.
Domain organisation. The Pru (pleckstrin-like receptor for ubiquitin) domain mediates interactions with PSMD1 and ubiquitin. Preferential binding to the proximal subunit of ‘Lys-48’-linked diubiquitin allows UCHL5 access to the distal subunit.
Similarity. Belongs to the ADRM1 family.
RefSeq proteins (4): NP_001268366, NP_001268367, NP_008933, NP_783163 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR006773 | Rpn13/ADRM1 | Family |
| IPR032368 | RPN13_DEUBAD | Domain |
| IPR038108 | RPN13_DEUBAD_sf | Homologous_superfamily |
| IPR038633 | Rpn13/ADRM1_Pru_sf | Homologous_superfamily |
| IPR044867 | DEUBAD_dom | Domain |
| IPR044868 | Rpn13/ADRM1_Pru | Domain |
Pfam: PF04683, PF16550
UniProt features (51 total): strand 16, helix 14, modified residue 7, turn 4, region of interest 3, domain 2, initiator methionine 1, chain 1, cross-link 1, sequence conflict 1, compositionally biased region 1
Structure
Experimental structures (PDB)
21 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 5V1Y | X-RAY DIFFRACTION | 1.42 |
| 6OI4 | X-RAY DIFFRACTION | 1.76 |
| 5IRS | X-RAY DIFFRACTION | 1.8 |
| 8VWO | X-RAY DIFFRACTION | 1.85 |
| 4WLR | X-RAY DIFFRACTION | 2 |
| 5V1Z | X-RAY DIFFRACTION | 2 |
| 8FTQ | X-RAY DIFFRACTION | 2.1 |
| 4UEL | X-RAY DIFFRACTION | 2.3 |
| 9E7K | X-RAY DIFFRACTION | 2.41 |
| 4UEM | X-RAY DIFFRACTION | 2.82 |
| 4WLQ | X-RAY DIFFRACTION | 2.85 |
| 2KQZ | SOLUTION NMR | |
| 2KR0 | SOLUTION NMR | |
| 2L5V | SOLUTION NMR | |
| 2MKZ | SOLUTION NMR | |
| 2NBV | SOLUTION NMR | |
| 5YMY | SOLUTION NMR | |
| 6CO4 | SOLUTION NMR | |
| 6UYI | SOLUTION NMR | |
| 6UYJ | SOLUTION NMR | |
| 7KXI | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q16186-F1 | 64.34 | 0.19 |
Antibody-complex structures (SAbDab): 1 — 9E7K
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (8): 127, 140, 211, 217, 405, 34, 2, 15
Function
Pathways and Gene Ontology
Reactome pathways
162 pathways
| ID | Pathway |
|---|---|
| R-HSA-1169091 | Activation of NF-kappaB in B cells |
| R-HSA-1234176 | Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha |
| R-HSA-1236974 | ER-Phagosome pathway |
| R-HSA-1236978 | Cross-presentation of soluble exogenous antigens (endosomes) |
| R-HSA-174084 | Autodegradation of Cdh1 by Cdh1:APC/C |
| R-HSA-174113 | SCF-beta-TrCP mediated degradation of Emi1 |
| R-HSA-174154 | APC/C:Cdc20 mediated degradation of Securin |
| R-HSA-174178 | APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1 |
| R-HSA-174184 | Cdc20:Phospho-APC/C mediated degradation of Cyclin A |
| R-HSA-180534 | Vpu mediated degradation of CD4 |
| R-HSA-180585 | Vif-mediated degradation of APOBEC3G |
| R-HSA-187577 | SCF(Skp2)-mediated degradation of p27/p21 |
| R-HSA-195253 | Degradation of beta-catenin by the destruction complex |
| R-HSA-202424 | Downstream TCR signaling |
| R-HSA-211733 | Regulation of activated PAK-2p34 by proteasome mediated degradation |
| R-HSA-2467813 | Separation of Sister Chromatids |
| R-HSA-2871837 | FCERI mediated NF-kB activation |
| R-HSA-349425 | Autodegradation of the E3 ubiquitin ligase COP1 |
| R-HSA-350562 | Regulation of ornithine decarboxylase (ODC) |
| R-HSA-382556 | ABC-family protein mediated transport |
| R-HSA-450408 | AUF1 (hnRNP D0) binds and destabilizes mRNA |
| R-HSA-4608870 | Asymmetric localization of PCP proteins |
| R-HSA-4641257 | Degradation of AXIN |
| R-HSA-4641258 | Degradation of DVL |
| R-HSA-5358346 | Hedgehog ligand biogenesis |
| R-HSA-5362768 | Hh mutants are degraded by ERAD |
| R-HSA-5607761 | Dectin-1 mediated noncanonical NF-kB signaling |
| R-HSA-5607764 | CLEC7A (Dectin-1) signaling |
| R-HSA-5610780 | Degradation of GLI1 by the proteasome |
| R-HSA-5610783 | Degradation of GLI2 by the proteasome |
MSigDB gene sets: 329 (showing top):
REACTOME_DNA_REPLICATION, REACTOME_SIGNALING_BY_NOTCH, RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP, REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1, REACTOME_INNATE_IMMUNE_SYSTEM, REACTOME_ADAPTIVE_IMMUNE_SYSTEM, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, KAAB_FAILED_HEART_ATRIUM_DN, GOBP_RESPONSE_TO_PEPTIDE, REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION, REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION, REACTOME_SCF_SKP2_MEDIATED_DEGRADATION_OF_P27_P21, GOBP_RESPONSE_TO_TYPE_I_INTERFERON, GOBP_MACROMOLECULE_CATABOLIC_PROCESS, IVANOVA_HEMATOPOIESIS_LATE_PROGENITOR
GO Biological Process (3): transcription elongation by RNA polymerase II (GO:0006368), proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161), proteasome assembly (GO:0043248)
GO Molecular Function (5): protease binding (GO:0002020), endopeptidase activator activity (GO:0061133), proteasome binding (GO:0070628), molecular function inhibitor activity (GO:0140678), protein binding (GO:0005515)
GO Cellular Component (7): proteasome complex (GO:0000502), nucleoplasm (GO:0005654), cytosol (GO:0005829), plasma membrane (GO:0005886), proteasome regulatory particle, lid subcomplex (GO:0008541), nucleus (GO:0005634), cytoplasm (GO:0005737)
Reactome top-level categories
Rollup of top-18 pathways:
| Category | Pathways |
|---|---|
| Antigen processing-Cross presentation | 2 |
| APC/C-mediated degradation of cell cycle proteins | 2 |
| Host Interactions of HIV factors | 2 |
| Downstream signaling events of B Cell Receptor (BCR) | 1 |
| Cellular response to hypoxia | 1 |
| Regulation of APC/C activators between G1/S and early anaphase | 1 |
| APC/C:Cdc20 mediated degradation of mitotic proteins | 1 |
| APC:Cdc20 mediated degradation of cell cycle proteins prior to satisfation of the cell cycle checkpoint | 1 |
| Cyclin E associated events during G1/S transition | 1 |
| Cyclin A:Cdk2-associated events at S phase entry | 1 |
| Signaling by WNT | 1 |
| TCR signaling | 1 |
| Regulation of Apoptosis | 1 |
| Mitotic Anaphase | 1 |
| Fc epsilon receptor (FCERI) signaling | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 3 |
| DNA-templated transcription elongation | 1 |
| transcription by RNA polymerase II | 1 |
| ubiquitin-dependent protein catabolic process | 1 |
| proteasomal protein catabolic process | 1 |
| protein-containing complex assembly | 1 |
| enzyme binding | 1 |
| endopeptidase activity | 1 |
| peptidase activator activity | 1 |
| endopeptidase regulator activity | 1 |
| protein-containing complex binding | 1 |
| molecular function regulator activity | 1 |
| binding | 1 |
| intracellular protein-containing complex | 1 |
| endopeptidase complex | 1 |
| nuclear lumen | 1 |
| cytoplasm | 1 |
| membrane | 1 |
| cell periphery | 1 |
| proteasome regulatory particle | 1 |
| protein-containing complex | 1 |
| intracellular membrane-bounded organelle | 1 |
| intracellular anatomical structure | 1 |
Protein interactions and networks
STRING
2010 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ADRM1 | UCHL5 | Q9Y5K5 | 999 |
| ADRM1 | PSMD4 | P55036 | 999 |
| ADRM1 | PSMD14 | O00487 | 989 |
| ADRM1 | PSMD8 | P48556 | 956 |
| ADRM1 | PSMC4 | P43686 | 943 |
| ADRM1 | USP14 | P54578 | 938 |
| ADRM1 | PSMD12 | O00232 | 900 |
| ADRM1 | PSMD11 | O00231 | 895 |
| ADRM1 | PSMD6 | Q15008 | 891 |
| ADRM1 | PSMD3 | O43242 | 881 |
| ADRM1 | PSMD7 | P51665 | 873 |
| ADRM1 | UBQLN2 | Q9UHD9 | 861 |
| ADRM1 | PSMD2 | Q13200 | 854 |
| ADRM1 | PSMD13 | Q9UNM6 | 852 |
| ADRM1 | PSMD1 | Q99460 | 830 |
IntAct
192 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| UCHL5 | ADRM1 | psi-mi:“MI:0915”(physical association) | 0.970 |
| ADRM1 | UCHL5 | psi-mi:“MI:0915”(physical association) | 0.970 |
| ADRM1 | UCHL5 | psi-mi:“MI:0407”(direct interaction) | 0.970 |
| UCHL5 | ADRM1 | psi-mi:“MI:0407”(direct interaction) | 0.970 |
| ADRM1 | UCHL5 | psi-mi:“MI:0403”(colocalization) | 0.970 |
| UCHL5 | ADRM1 | psi-mi:“MI:0403”(colocalization) | 0.970 |
| PSMC3 | PSMD9 | psi-mi:“MI:0914”(association) | 0.940 |
| UCHL5 | PSMD11 | psi-mi:“MI:0914”(association) | 0.840 |
| UCHL5 | PSMD12 | psi-mi:“MI:0914”(association) | 0.840 |
| PSMD10 | PSMD11 | psi-mi:“MI:0914”(association) | 0.800 |
| ADRM1 | PSMD2 | psi-mi:“MI:0915”(physical association) | 0.760 |
| PSMD2 | ADRM1 | psi-mi:“MI:0403”(colocalization) | 0.760 |
| PSMD1 | ADRM1 | psi-mi:“MI:0407”(direct interaction) | 0.750 |
| ADRM1 | PSMD1 | psi-mi:“MI:0407”(direct interaction) | 0.750 |
BioGRID (558): ADRM1 (Affinity Capture-MS), UBC (Two-hybrid), UCHL5 (Two-hybrid), ADRM1 (Biochemical Activity), ADRM1 (Affinity Capture-Western), ADRM1 (Affinity Capture-MS), ADRM1 (Affinity Capture-MS), ADRM1 (Affinity Capture-MS), ADRM1 (Affinity Capture-MS), PSMD1 (Affinity Capture-MS), PSMD13 (Affinity Capture-MS), PSMD3 (Affinity Capture-MS), PSMD11 (Affinity Capture-MS), PSMC6 (Affinity Capture-MS), PSMC3 (Affinity Capture-MS)
ESM2 similar proteins: A1L5A6, A2VDN6, A4IGK4, O00401, O08816, O12940, O35226, O43395, O48726, O60784, O88746, P40855, P50503, P55036, Q15459, Q16186, Q2KIA6, Q3SZD1, Q4WTC0, Q58DA0, Q5R5F1, Q5R684, Q5R7U2, Q5XHH7, Q5ZLF0, Q60415, Q62698, Q68FJ8, Q6GN67, Q6NRL6, Q6NZ09, Q6P877, Q6PDL0, Q7ZXD6, Q84L30, Q84L31, Q84L33, Q8BUR9, Q8K4Z5, Q8R1Q8
Diamond homologs: A1L5A6, O48726, Q09289, Q16186, Q556N5, Q6GN67, Q6NZ09, Q6P877, Q7K2G1, Q7ZXD6, Q98SH3, Q9JKV1, Q9JMB5, Q9USM1, Q9Y7Y6, O13563
SIGNOR signaling
1 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| ADRM1 | “form complex” | “26S Proteasome” | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 118 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Regulation of activated PAK-2p34 by proteasome mediated degradation | 16 | 54.4× | 2e-22 |
| Vpu mediated degradation of CD4 | 16 | 51.8× | 3e-22 |
| Autodegradation of the E3 ubiquitin ligase COP1 | 16 | 51.8× | 3e-22 |
| Ubiquitin-dependent degradation of Cyclin D | 16 | 51.8× | 3e-22 |
| Regulation of ornithine decarboxylase (ODC) | 15 | 49.7× | 4e-21 |
| Vif-mediated degradation of APOBEC3G | 16 | 49.5× | 5e-22 |
| AUF1 (hnRNP D0) binds and destabilizes mRNA | 16 | 48.4× | 5e-22 |
| Degradation of AXIN | 16 | 48.4× | 5e-22 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| positive regulation of DNA repair | 5 | 18.7× | 1e-03 |
| proteasome-mediated ubiquitin-dependent protein catabolic process | 21 | 11.4× | 7e-14 |
| ubiquitin-dependent protein catabolic process | 9 | 7.0× | 1e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
84 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 0 |
| Uncertain significance | 59 |
| Likely benign | 0 |
| Benign | 5 |
Top pathogenic / likely-pathogenic (1)
| Variant ID | HGVS | Classification |
|---|---|---|
| 625661 | GRCh37/hg19 20q13.2-13.33(chr20:54143747-62194881) | Pathogenic |
SpliceAI
1524 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 20:62303760:G:GT | donor_gain | 1.0000 |
| 20:62303779:GAC:G | donor_gain | 1.0000 |
| 20:62303780:ACGT:A | donor_loss | 1.0000 |
| 20:62303781:CG:C | donor_loss | 1.0000 |
| 20:62303782:G:GG | donor_gain | 1.0000 |
| 20:62304450:T:TA | acceptor_gain | 1.0000 |
| 20:62304455:TGCCA:T | acceptor_loss | 1.0000 |
| 20:62304456:GCCAG:G | acceptor_loss | 1.0000 |
| 20:62304457:CCAG:C | acceptor_loss | 1.0000 |
| 20:62304458:CA:C | acceptor_loss | 1.0000 |
| 20:62304459:A:AG | acceptor_gain | 1.0000 |
| 20:62304459:AG:A | acceptor_gain | 1.0000 |
| 20:62304459:AGGA:A | acceptor_loss | 1.0000 |
| 20:62304460:G:GA | acceptor_loss | 1.0000 |
| 20:62304460:G:GG | acceptor_gain | 1.0000 |
| 20:62304460:GG:G | acceptor_gain | 1.0000 |
| 20:62304574:GCAGG:G | donor_loss | 1.0000 |
| 20:62304575:CAGG:C | donor_loss | 1.0000 |
| 20:62304577:GGTAT:G | donor_loss | 1.0000 |
| 20:62304578:G:A | donor_loss | 1.0000 |
| 20:62304579:T:A | donor_loss | 1.0000 |
| 20:62306192:TGCA:T | acceptor_loss | 1.0000 |
| 20:62306195:AG:A | acceptor_gain | 1.0000 |
| 20:62306196:GG:G | acceptor_gain | 1.0000 |
| 20:62306237:TCAAC:T | donor_gain | 1.0000 |
| 20:62306288:G:GT | donor_gain | 1.0000 |
| 20:62306318:GCG:G | donor_gain | 1.0000 |
| 20:62306319:CG:C | donor_loss | 1.0000 |
| 20:62306320:GG:G | donor_loss | 1.0000 |
| 20:62306322:T:G | donor_loss | 1.0000 |
AlphaMissense
2647 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 20:62303654:G:A | G29E | 1.000 |
| 20:62303681:T:A | V38E | 1.000 |
| 20:62303701:G:A | G45R | 1.000 |
| 20:62303701:G:C | G45R | 1.000 |
| 20:62303701:G:T | G45W | 1.000 |
| 20:62303702:G:A | G45E | 1.000 |
| 20:62303735:T:C | L56P | 1.000 |
| 20:62303740:C:G | H58D | 1.000 |
| 20:62303749:T:A | W61R | 1.000 |
| 20:62303749:T:C | W61R | 1.000 |
| 20:62304468:T:A | I74N | 1.000 |
| 20:62304473:T:C | F76L | 1.000 |
| 20:62304474:T:G | F76C | 1.000 |
| 20:62304475:C:A | F76L | 1.000 |
| 20:62304475:C:G | F76L | 1.000 |
| 20:62304492:T:C | F82S | 1.000 |
| 20:62304534:T:C | L96P | 1.000 |
| 20:62304539:T:C | F98L | 1.000 |
| 20:62304541:C:A | F98L | 1.000 |
| 20:62304541:C:G | F98L | 1.000 |
| 20:62307772:T:C | L267P | 1.000 |
| 20:62308093:T:C | L310P | 1.000 |
| 20:62308390:C:A | A346D | 1.000 |
| 20:62308459:C:A | A369D | 1.000 |
| 20:62303650:G:C | A28P | 0.999 |
| 20:62303651:C:A | A28E | 0.999 |
| 20:62303653:G:A | G29R | 0.999 |
| 20:62303653:G:C | G29R | 0.999 |
| 20:62303654:G:T | G29V | 0.999 |
| 20:62303660:T:A | M31K | 0.999 |
dbSNP variants (sampled 300 via entrez): RS1000405216 (20:62304266 C>G,T), RS1000471418 (20:62302400 C>G,T), RS1000561190 (20:62308847 T>C,G), RS1000627913 (20:62307956 T>C), RS1000736242 (20:62305240 A>G,T), RS1000746120 (20:62305053 G>A), RS1001114689 (20:62301634 CTATTAT>C,CTAT,CTATTATTAT), RS1001188217 (20:62301941 C>T), RS1001366858 (20:62305995 G>A), RS1002122838 (20:62308232 G>C), RS1002711399 (20:62304652 C>T), RS1002933558 (20:62302825 A>T), RS1003242293 (20:62308955 C>A,T), RS1004025830 (20:62305599 C>G,T), RS1004923612 (20:62305130 T>C)
Disease associations
OMIM: gene MIM:610650 | disease phenotypes:
GenCC curated gene-disease
Mondo (3): prostate cancer (MONDO:0008315), breast ductal adenocarcinoma (MONDO:0005590), developmental and epileptic encephalopathy (MONDO:0100620)
Orphanet (1): Familial prostate cancer (Orphanet:1331)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
1 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001942_4 | Prostate cancer | 4.000000e-08 |
MeSH disease descriptors (2)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D018270 | Carcinoma, Ductal, Breast | C04.557.470.200.025.232.500; C04.557.470.615.132.500; C04.588.180.390; C17.800.090.500.390 |
| D011471 | Prostatic Neoplasms | C04.588.945.440.770; C12.100.500.260.750; C12.100.500.565.625; C12.200.294.260.750; C12.200.294.565.625; C12.200.758.409.750; C12.900.619.750 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (8): CHEMBL2364701 (PROTEIN COMPLEX), CHEMBL3710002 (SINGLE PROTEIN), CHEMBL5291684 (PROTEIN-PROTEIN INTERACTION), CHEMBL6195599 (PROTEIN-PROTEIN INTERACTION), CHEMBL6195600 (PROTEIN-PROTEIN INTERACTION), CHEMBL6195601 (PROTEIN-PROTEIN INTERACTION), CHEMBL6195602 (PROTEIN-PROTEIN INTERACTION), CHEMBL6195603 (PROTEIN-PROTEIN INTERACTION)
Molecules with ChEMBL bioactivity
2 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 25,628 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL325041 | BORTEZOMIB | 4 | 13,120 |
| CHEMBL451887 | CARFILZOMIB | 4 | 12,508 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
66 potent at pChembl≥5 of 68 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 8.62 | IC50 | 2.4 | nM | BORTEZOMIB |
| 8.59 | IC50 | 2.56 | nM | BORTEZOMIB |
| 8.57 | IC50 | 2.7 | nM | CHEMBL3237863 |
| 8.47 | IC50 | 3.4 | nM | CHEMBL6143686 |
| 8.41 | IC50 | 3.9 | nM | CHEMBL3237862 |
| 8.39 | IC50 | 4.1 | nM | CHEMBL3237864 |
| 8.39 | IC50 | 4.1 | nM | CHEMBL3237867 |
| 8.32 | IC50 | 4.8 | nM | CHEMBL3237873 |
| 8.29 | IC50 | 5.1 | nM | CHEMBL3237865 |
| 8.24 | IC50 | 5.7 | nM | CHEMBL3237866 |
| 8.24 | IC50 | 5.7 | nM | CHEMBL3237860 |
| 8.23 | IC50 | 5.9 | nM | CHEMBL3237868 |
| 8.15 | IC50 | 7 | nM | BORTEZOMIB |
| 8.15 | IC50 | 7.1 | nM | CHEMBL3237870 |
| 8.15 | IC50 | 7.14 | nM | BORTEZOMIB |
| 8.12 | IC50 | 7.5 | nM | CHEMBL3237871 |
| 8.11 | IC50 | 7.7 | nM | CHEMBL3237874 |
| 8.11 | IC50 | 7.8 | nM | CHEMBL3237869 |
| 8.07 | IC50 | 8.6 | nM | CARFILZOMIB |
| 7.87 | Kd | 13.47 | nM | CHEMBL5653589 |
| 7.87 | ED50 | 13.47 | nM | CHEMBL5653589 |
| 7.54 | IC50 | 29 | nM | CHEMBL3237861 |
| 7.34 | IC50 | 46 | nM | CHEMBL3237867 |
| 7.27 | IC50 | 54 | nM | CHEMBL3237872 |
| 7.12 | IC50 | 75 | nM | CHEMBL3237865 |
| 7.12 | IC50 | 76 | nM | CHEMBL3237866 |
| 6.96 | IC50 | 110 | nM | CHEMBL3262766 |
| 6.92 | IC50 | 120 | nM | CHEMBL3237864 |
| 6.92 | IC50 | 120 | nM | BORTEZOMIB |
| 6.89 | IC50 | 130 | nM | CHEMBL3237869 |
| 6.85 | IC50 | 140 | nM | CHEMBL3237862 |
| 6.82 | IC50 | 150 | nM | CHEMBL3237863 |
| 6.77 | IC50 | 170 | nM | CHEMBL3237873 |
| 6.77 | IC50 | 170 | nM | CHEMBL3262765 |
| 6.72 | IC50 | 190 | nM | CHEMBL3262758 |
| 6.68 | IC50 | 210 | nM | CHEMBL3237870 |
| 6.66 | IC50 | 220 | nM | CHEMBL3262756 |
| 6.60 | IC50 | 250 | nM | CHEMBL3237868 |
| 6.47 | IC50 | 340 | nM | CHEMBL3262752 |
| 6.47 | IC50 | 340 | nM | CHEMBL3262755 |
| 6.44 | IC50 | 360 | nM | CHEMBL3262757 |
| 6.42 | IC50 | 380 | nM | CHEMBL3262754 |
| 6.36 | IC50 | 440 | nM | CHEMBL3262753 |
| 6.30 | IC50 | 500 | nM | CHEMBL3237872 |
| 6.20 | IC50 | 630 | nM | CHEMBL3262762 |
| 6.02 | IC50 | 950 | nM | CHEMBL3262761 |
| 6.00 | IC50 | 1000 | nM | CHEMBL3237871 |
| 5.96 | IC50 | 1100 | nM | CHEMBL3237862 |
| 5.85 | IC50 | 1400 | nM | BELACTOSIN A |
| 5.84 | IC50 | 1440 | nM | BELACTOSIN A |
PubChem BioAssay actives
62 with measured affinity, of 142 total; 34 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| Bortezomib | 1985684: Inhibition of 26S proteasome (unknown origin) | ic50 | 0.0024 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0027 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[3-phenylmethoxy-2-(phenylmethoxymethyl)propyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0039 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[5-phenylmethoxy-4-(phenylmethoxymethyl)pentyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0041 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[5-phenylmethoxy-4-(phenylmethoxymethyl)pentyl]pentanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0041 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-(4-phenylmethoxybutyl)butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0048 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[3-phenylmethoxy-2-(phenylmethoxymethyl)propyl]pentanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0051 | uM |
| (2S)-2-acetamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]pentanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0057 | uM |
| benzyl N-[(2S)-1-[[(2R)-1-[(1R,2S)-2-[[(2R,3S)-3-[(2S)-butan-2-yl]-4-oxooxetane-2-carbonyl]amino]cyclopropyl]-4-phenylbutan-2-yl]amino]-1-oxopropan-2-yl]carbamate | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0057 | uM |
| (2S)-2-[(2,5-dichlorobenzoyl)amino]-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0059 | uM |
| (2S)-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]-2-(pyrazine-2-carbonylamino)butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0071 | uM |
| (2S)-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]-2-[(6-phenylpyridine-2-carbonyl)amino]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0075 | uM |
| [(1R)-1-[[(2S)-2-acetamido-4-oxo-4-[[3-phenylmethoxy-2-(phenylmethoxymethyl)propyl]amino]butanoyl]amino]-3-methylbutyl]boronic acid | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0077 | uM |
| (2S)-2-benzamido-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0078 | uM |
| Carfilzomib | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.0086 | uM |
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2147810: Binding affinity to human ADRM1 incubated for 45 mins by Kinobead based pull down assay | kd | 0.0135 | uM |
| (2R,3S)-3-[(2S)-butan-2-yl]-4-oxo-N-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]oxetane-2-carboxamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0290 | uM |
| (2S)-2-acetamido-N’-methyl-N-[(1R)-3-methyl-1-[(1S,2S,6R,8S)-2,9,9-trimethyl-3,5-dioxa-4-boratricyclo[6.1.1.02,6]decan-4-yl]butyl]butanediamide | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 0.0540 | uM |
| N-[(1R)-3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]naphthalene-2-carboxamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.1100 | uM |
| N-[(1R)-3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]-4-(trifluoromethyl)benzamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.1700 | uM |
| N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]naphthalene-2-carboxamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.1900 | uM |
| N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]-4-(trifluoromethyl)benzamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.2200 | uM |
| N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]pyridine-3-carboxamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.3400 | uM |
| 4-methoxy-N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]benzamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.3400 | uM |
| 4-cyano-N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]benzamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.3600 | uM |
| 4-fluoro-N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]benzamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.3800 | uM |
| N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]benzamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.4400 | uM |
| N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]oxane-4-carboxamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.6300 | uM |
| N-[3-[[(2S)-1-[[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-oxo-1-phenylpropyl]thiophene-2-carboxamide | 1141825: Inhibition of chymotrypsin-like enzyme activity of purified human 20S proteasome using Suc-Leu-Leu-Val-Tyr-AMC as substrate by fluorescence method | ic50 | 0.9500 | uM |
| (2S)-2-[[(2S)-2-aminopropanoyl]amino]-3-[(1S,2S)-2-[[(2R,3S)-3-[(2S)-butan-2-yl]-4-oxooxetane-2-carbonyl]amino]cyclopropyl]propanoic acid | 1128229: Inhibition of chymotrypsin-like activity of human 20S proteasome using Suc-LLVY-AMC as substrate | ic50 | 1.4000 | uM |
| (2S)-2-acetamido-N-[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]-N’-[4-phenylmethoxy-3-(phenylmethoxymethyl)butyl]butanediamide | 1152964: Inhibition of chymotrypsin-like of human 20S proteasome using chromophoric Suc-LLVY-AMC as substrate after 60 mins by fluorescence assay | ic50 | 2.3000 | uM |
| N-[3-(2-oxo-1,3,4-oxathiazol-5-yl)phenyl]acetamide | 1137840: Inhibition of chymotrypsin-like activity of 26S proteasome in intact human Karpas 1106p cells assessed as substrate hydrolysis using Suc-LLVY-(D)-aminoluciferin as substrate after 3 hrs by cell-based Proteasome-Glo assay | ec50 | 4.2000 | uM |
| (2S)-2-acetamido-N-[(2S)-4-methyl-1-[(2R)-2-methyloxiran-2-yl]-1-oxopentan-2-yl]-N’-(4-phenylmethoxybutyl)butanediamide | 1152964: Inhibition of chymotrypsin-like of human 20S proteasome using chromophoric Suc-LLVY-AMC as substrate after 60 mins by fluorescence assay | ic50 | 5.7000 | uM |
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2147810: Binding affinity to human ADRM1 incubated for 45 mins by Kinobead based pull down assay | kd | 7.0887 | uM |
CTD chemical–gene interactions
60 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | affects cotreatment, increases abundance, increases expression | 3 |
| Valproic Acid | affects expression, increases expression, increases methylation | 3 |
| Cyclosporine | increases expression | 3 |
| bisphenol A | affects expression, decreases expression | 2 |
| Cisplatin | increases activity, increases expression, increases reaction, affects binding, increases phosphorylation (+1 more) | 2 |
| Particulate Matter | affects expression, increases reaction, affects cotreatment, increases abundance, increases expression | 2 |
| FR900359 | decreases phosphorylation | 1 |
| 2,4,6-tribromophenol | decreases expression | 1 |
| methylmercuric chloride | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| decabromobiphenyl ether | decreases expression | 1 |
| cobaltous chloride | increases expression | 1 |
| tetrabromobisphenol A | decreases expression | 1 |
| manganese chloride | affects cotreatment, increases abundance, increases expression | 1 |
| cupric chloride | increases expression | 1 |
| coumarin | decreases phosphorylation | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| JP8 aviation fuel | decreases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | decreases expression, affects cotreatment | 1 |
| oxidized-L-alpha-1-palmitoyl-2-arachidonoyl-sn-glycero-3-phosphorylcholine | affects expression, increases reaction | 1 |
| nutlin 3 | affects cotreatment, increases secretion | 1 |
| 14-deoxy-11,12-didehydroandrographolide | decreases expression | 1 |
| 2,2’,4,4’-tetrabromodiphenyl ether | decreases expression | 1 |
| pentabrominated diphenyl ether 100 | decreases expression | 1 |
| hexabrominated diphenyl ether 153 | decreases expression | 1 |
| 2-(1H-indazol-4-yl)-6-(4-methanesulfonylpiperazin-1-ylmethyl)-4-morpholin-4-ylthieno(3,2-d)pyrimidine | decreases expression, increases response to substance | 1 |
| LDN 193189 | affects cotreatment, decreases expression | 1 |
| bisphenol AF | increases expression | 1 |
| 4-(4-((5-(4,5-dimethyl-2-nitrophenyl)-2-furanyl)methylene)-4,5-dihydro-3-methyl-5-oxo-1H-pyrazol-1-yl)benzoic acid | decreases expression | 1 |
| Sunitinib | decreases expression | 1 |
ChEMBL screening assays
60 unique, capped per target: 60 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3222879 | Binding | Inhibition of human 20S proteasome using Suc-LLVY-AMC as substrate preincubated for 30 mins followed by substrate addition measured after 90 mins by fluorescence assay | Oxathiazole-2-one derivative of bortezomib: Synthesis, stability and proteasome inhibition activity — Medchemcomm |
Cellosaurus cell lines
4 cell lines: 3 transformed cell line, 1 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B2R8 | Abcam HEK293T ADRM1 KO | Transformed cell line | Female |
| CVCL_D9XB | Ubigene HeLa ADRM1 KO | Cancer cell line | Female |
| CVCL_E3BL | HEK293T ADRM1 K21R/K34R | Transformed cell line | Female |
| CVCL_E3BM | HEK293T ADRM1 K21R/K34R agDD-GFP | Transformed cell line | Female |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00029224 | PHASE4 | COMPLETED | Treatment With Zoledronic Acid in Patients With Breast Cancer, Multiple Myeloma, and Prostate Cancer With Cancer Related Bone Lesions |
| NCT00035997 | PHASE4 | COMPLETED | Open-label Trial on the Effect of I.V. Zoledronic Acid 4 mg on Bone Density in Hormone Sensitive Prostate Cancer Patients With Bone Metastasis |
| NCT00063609 | PHASE4 | COMPLETED | The Effect of Zoledronic Acid on Bone Loss in Prostate Cancer Patients Undergoing Androgen Deprivation Therapy |
| NCT00103623 | PHASE4 | SUSPENDED | The Plenaxis® Experience Study |
| NCT00106392 | PHASE4 | COMPLETED | A Safety and Efficacy Study of Prograf in the Prevention of Erectile Dysfunction After Radical Prostatectomy |
| NCT00185029 | PHASE4 | UNKNOWN | MR-Lymphography and Lymph Node Staging in Prostate Cancer |
| NCT00199485 | PHASE4 | COMPLETED | Angelica Sinensis for the Treatment of Hot Flashes in Men Undergoing LHRH Therapy for Prostate Cancer |
| NCT00219219 | PHASE4 | COMPLETED | Zoledronic Acid in the Prevention of Skeletal-related Events in Hormone Refractory and Hormone-sensitive Prostate Cancer Patients With Bone Metastases |
| NCT00219271 | PHASE4 | COMPLETED | Effect Of Zoledronic Acid On Circulating And Bone Marrow-Residing Prostate Cancer Cells In Patients With Clinically Localized Prostate Cancer |
| NCT00237146 | PHASE4 | COMPLETED | Study to Evaluate Zoledronic Acid on Quality of Life and Skeletal-related Events as Adjuvant Treatment in Patients With Hormone-naïve Prostate Cancer and Bone Metastasis Who Have Undergone Orchiectomy |
| NCT00242554 | PHASE4 | COMPLETED | Open-label Phase IV Clinical Trial to Evaluate the Safety and Tolerability of Zoledronic Acid in Patients With Prostate Cancer and Bone Metastases |
| NCT00280098 | PHASE4 | COMPLETED | Docetaxel in the Treatment of Hormone Refractory Prostate Cancer |
| NCT00293696 | PHASE4 | COMPLETED | Casodex/Zoladex Biomarkers in Localised Prostate Cancer |
| NCT00334139 | PHASE4 | COMPLETED | Effect of Zoledronic Acid on Bone Metabolism in Patients With Bone Metastasis and Prostate or Breast Cancer |
| NCT00375765 | PHASE4 | COMPLETED | Effects On Dihydrotestosterone Regulated Gene Expression In Benign Prostatic Hyperplasia Or Prostate Cancer |
| NCT00391690 | PHASE4 | COMPLETED | Evaluation of Bone Markers as Diagnostic Tools for Early Detection of Bone Metastases in Patients With High Risk Prostate Cancer |
| NCT00422708 | PHASE4 | COMPLETED | Local Anesthesia for Prostate Biopsy |
| NCT00526331 | PHASE4 | COMPLETED | Evaluation of Arterial Pressure Based Cardiac Output for Goal-Directed Perioperative Therapy |
| NCT00590213 | PHASE4 | COMPLETED | Compare the Value of Prophylactic Versus Therapeutic Breast Radiotherapy in CASODEX |
| NCT00629330 | PHASE4 | TERMINATED | Dissemination of Prostate Cancer Screening to PCP’s in African American Communities |
| NCT00771966 | PHASE4 | COMPLETED | Radical Prostatectomy and Perioperative Fluid Therapy |
| NCT00805701 | PHASE4 | COMPLETED | Study Assessing The Efficacy And Safety Of Avodart (Dutasteride) At Improving Urinary Symptoms In Men With Prostate Cancer Who Are Undergoing Seed Implantation |
| NCT00859027 | PHASE4 | COMPLETED | Effect Of Risedronate On Bone Mass In Older Men Receiving Neoadjuvant Therapy For Prostate Cancer |
| NCT00906269 | PHASE4 | UNKNOWN | Can Hyperbaric Oxygen Improve Erectile Function Following Surgery for Prostate Cancer |
| NCT00953277 | PHASE4 | COMPLETED | Study of Nerve Reconstruction Using AVANCE in Subjects Who Undergo Robotic Assisted Prostatectomy for Treatment of Prostate Cancer |
| NCT00982800 | PHASE4 | COMPLETED | Does Postoperative Gabapentin Reduce Pain, Opioid Consumption and Anxiety and Have a Positive Effect on Health Related Quality of Life After Radical Prostatectomy? |
| NCT01083199 | PHASE4 | COMPLETED | Global Performance Evaluation of the AMS CONTINUUM™ Device |
| NCT01136226 | PHASE4 | COMPLETED | Evaluate Recovery of Testosterone for Patients Using Eligard |
| NCT01161563 | PHASE4 | COMPLETED | Randomized Crossover Trial to Assess the Tolerability of Gonadotropin Releasing Hormone (GnRH) Analogue Administration |
| NCT01230905 | PHASE4 | COMPLETED | Study to Monitor the Effects of Androgen Suppression Treatment on the Heart |
| NCT01296672 | PHASE4 | COMPLETED | 3 Month Finasteride Challenge Test Can Significantly Improve the Performance of Screening for Prostate Cancer |
| NCT01365143 | PHASE4 | TERMINATED | Prospective Randomized Trial Comparing Robotic Versus Open Radical Prostatectomy |
| NCT01379742 | PHASE4 | UNKNOWN | Comparison of Between ThinSeed™ and OncoSeed™ for Permanent Prostate Brachytherapy |
| NCT01486563 | PHASE4 | COMPLETED | Hydroxyethyl Starch and Renal Function After Radical Prostatectomy |
| NCT01511874 | PHASE4 | COMPLETED | Efficacy and Safety Study of ELIGARD 22.5mg With Prostate Cancer |
| NCT01512472 | PHASE4 | TERMINATED | Firmagon (Degarelix) Intermittent Therapy |
| NCT01547416 | PHASE4 | COMPLETED | The Effect of Combined General/Epidural Anesthesia Versus General Anesthesia on Diaphragmatic Function |
| NCT01571544 | PHASE4 | COMPLETED | The Use of Thermal Suits as Preventing Hypothermia During Surgery |
| NCT01581749 | PHASE4 | UNKNOWN | Evaluation of Truebeam for Low-Intermediate Risk Prostate Cancer |
| NCT01649635 | PHASE4 | COMPLETED | Study of Cabazitaxel Combined With Prednisone and Prophylaxis of Neutropenia Complications in the Treatment of Patients With Metastatic Castration-resistant Prostate Cancer |
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): breast ductal adenocarcinoma, developmental and epileptic encephalopathy