AGK-DT

Summary

AGK-DT (AGK divergent transcript, HGNC:55356) is a long non-coding RNA gene on chromosome 7q34.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55356
Approved symbol	AGK-DT
Name	AGK divergent transcript
Location	7q34
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000261570
Ensembl biotype	lncRNA
Entrez	105375538
RNAcentral	URS00026A1D27 — lncRNA, 943 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 20 — 20 lncRNA

ENST00000565449, ENST00000566357, ENST00000567503, ENST00000663125, ENST00000666392, ENST00000668372, ENST00000725337, ENST00000725338, ENST00000725339, ENST00000725340, ENST00000725341, ENST00000725342, ENST00000725343, ENST00000725344, ENST00000725345, ENST00000725346, ENST00000725347, ENST00000725348, ENST00000725349, ENST00000725699

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000565449 — 2 exons

Exon	Start	End
ENSE00002609086	141512974	141513183
ENSE00002621645	141512698	141512872

Expression profiles

Bgee: expression breadth ubiquitous, 116 present calls, max score 93.29.

Top tissues by expression

116 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	93.29	gold quality
bone marrow cell	CL:0002092	69.17	silver quality
nucleus accumbens	UBERON:0001882	67.16	gold quality
putamen	UBERON:0001874	65.60	gold quality
caudate nucleus	UBERON:0001873	65.40	gold quality
ventricular zone	UBERON:0003053	65.15	gold quality
cortical plate	UBERON:0005343	64.82	gold quality
sural nerve	UBERON:0015488	64.76	silver quality
pituitary gland	UBERON:0000007	63.63	gold quality
islet of Langerhans	UBERON:0000006	63.42	gold quality
primary visual cortex	UBERON:0002436	62.92	gold quality
adenohypophysis	UBERON:0002196	62.74	gold quality
hypothalamus	UBERON:0001898	61.88	gold quality
amygdala	UBERON:0001876	61.32	gold quality
temporal lobe	UBERON:0001871	61.20	gold quality
monocyte	CL:0000576	60.74	gold quality
brain	UBERON:0000955	60.69	gold quality
substantia nigra	UBERON:0002038	60.12	gold quality
anterior cingulate cortex	UBERON:0009835	59.79	gold quality
right frontal lobe	UBERON:0002810	59.62	gold quality
calcaneal tendon	UBERON:0003701	59.53	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	59.52	gold quality
cerebral cortex	UBERON:0000956	59.28	gold quality
prefrontal cortex	UBERON:0000451	59.19	gold quality
Brodmann (1909) area 9	UBERON:0013540	59.18	gold quality
frontal cortex	UBERON:0001870	59.13	gold quality
liver	UBERON:0002107	59.11	gold quality
ganglionic eminence	UBERON:0004023	58.84	gold quality
Ammon’s horn	UBERON:0001954	58.16	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	56.99	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.63

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.