AGO1
geneOn this page
Also known as hAGO1
Summary
AGO1 (argonaute RISC component 1, HGNC:3262) is a protein-coding gene on chromosome 1p34.3, encoding Protein argonaute-1 (Q9UL18). Required for RNA-mediated gene silencing (RNAi).
This gene encodes a member of the argonaute family of proteins, which associate with small RNAs and have important roles in RNA interference (RNAi) and RNA silencing. This protein binds to microRNAs (miRNAs) or small interfering RNAs (siRNAs) and represses translation of mRNAs that are complementary to them. It is also involved in transcriptional gene silencing (TGS) of promoter regions that are complementary to bound short antigene RNAs (agRNAs), as well as in the degradation of miRNA-bound mRNA targets. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. A recent study showed this gene to be an authentic stop codon readthrough target, and that its mRNA could give rise to an additional C-terminally extended isoform by use of an alternative in-frame translation termination codon.
Source: NCBI Gene 26523 — RefSeq curated summary.
At a glance
- Gene–disease (curated): complex neurodevelopmental disorder (Definitive, ClinGen) — +1 more curated relationship
- GWAS associations: 1
- Clinical variants (ClinVar): 191 total — 1 pathogenic, 13 likely-pathogenic
- Phenotypes (HPO): 37
- MANE Select transcript:
NM_012199
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:3262 |
| Approved symbol | AGO1 |
| Name | argonaute RISC component 1 |
| Location | 1p34.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | hAGO1 |
| Ensembl gene | ENSG00000092847 |
| Ensembl biotype | protein_coding |
| OMIM | 606228 |
| Entrez | 26523 |
Gene structure
Transcript identifiers
Ensembl transcripts: 13 — 8 protein_coding, 5 nonsense_mediated_decay
ENST00000373204, ENST00000373206, ENST00000635259, ENST00000674426, ENST00000699841, ENST00000699842, ENST00000699843, ENST00000699844, ENST00000910381, ENST00000910382, ENST00000910383, ENST00000931710, ENST00000931711
RefSeq mRNA: 3 — MANE Select: NM_012199
NM_001317122, NM_001317123, NM_012199
CCDS: CCDS398, CCDS81300, CCDS90915
Canonical transcript exons
ENST00000373204 — 19 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000594948 | 35901474 | 35901593 |
| ENSE00000766012 | 35893097 | 35893278 |
| ENSE00000766016 | 35894037 | 35894171 |
| ENSE00000766075 | 35901948 | 35902070 |
| ENSE00000766077 | 35902204 | 35902337 |
| ENSE00000766079 | 35906935 | 35907119 |
| ENSE00000766081 | 35913842 | 35914001 |
| ENSE00000766083 | 35914184 | 35914274 |
| ENSE00000766085 | 35915348 | 35915542 |
| ENSE00000766086 | 35917593 | 35917727 |
| ENSE00000766088 | 35918322 | 35918423 |
| ENSE00001459760 | 35919499 | 35930532 |
| ENSE00001459761 | 35883209 | 35883446 |
| ENSE00001631240 | 35919055 | 35919254 |
| ENSE00001644212 | 35894315 | 35894402 |
| ENSE00001684483 | 35893674 | 35893810 |
| ENSE00001795442 | 35895122 | 35895269 |
| ENSE00003669834 | 35892557 | 35892677 |
| ENSE00003691414 | 35888427 | 35888610 |
Expression profiles
Bgee: expression breadth ubiquitous, 277 present calls, max score 89.91.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 24.1619 / max 225.1369, expressed in 1815 samples.
FANTOM5 promoters (4 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 2132 | 12.8922 | 1789 |
| 2133 | 9.2925 | 1771 |
| 2131 | 1.2002 | 105 |
| 2135 | 0.7770 | 305 |
Top tissues by expression
285 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| ganglionic eminence | UBERON:0004023 | 89.91 | gold quality |
| cervix squamous epithelium | UBERON:0006922 | 89.37 | silver quality |
| visceral pleura | UBERON:0002401 | 89.06 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 88.63 | gold quality |
| pleura | UBERON:0000977 | 88.54 | gold quality |
| parietal pleura | UBERON:0002400 | 88.44 | gold quality |
| ventricular zone | UBERON:0003053 | 87.04 | gold quality |
| adrenal tissue | UBERON:0018303 | 85.66 | gold quality |
| hair follicle | UBERON:0002073 | 85.61 | silver quality |
| monocyte | CL:0000576 | 85.43 | gold quality |
| leukocyte | CL:0000738 | 85.40 | gold quality |
| mononuclear cell | CL:0000842 | 85.39 | gold quality |
| medial globus pallidus | UBERON:0002477 | 84.75 | gold quality |
| tibia | UBERON:0000979 | 84.65 | gold quality |
| stromal cell of endometrium | CL:0002255 | 84.44 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 84.22 | gold quality |
| ileal mucosa | UBERON:0000331 | 84.15 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 83.45 | gold quality |
| parotid gland | UBERON:0001831 | 83.42 | gold quality |
| squamous epithelium | UBERON:0006914 | 83.32 | gold quality |
| embryo | UBERON:0000922 | 83.07 | gold quality |
| colonic epithelium | UBERON:0000397 | 82.79 | gold quality |
| epithelial cell of pancreas | CL:0000083 | 82.56 | silver quality |
| metanephric glomerulus | UBERON:0004736 | 82.48 | gold quality |
| nephron tubule | UBERON:0001231 | 82.43 | gold quality |
| renal glomerulus | UBERON:0000074 | 82.38 | gold quality |
| germinal epithelium of ovary | UBERON:0001304 | 82.30 | gold quality |
| tibialis anterior | UBERON:0001385 | 82.29 | silver quality |
| blood | UBERON:0000178 | 82.24 | gold quality |
| myocardium | UBERON:0002349 | 82.18 | silver quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 6.79 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
3 targets.
| Target | Regulation |
|---|---|
| CCNB1 | Activation |
| IL2 | Activation |
| RELA | Activation |
Upstream regulators (CollecTRI, top): DNMT1, ESR1, MYC, SOX4
miRNA regulators (miRDB)
315 targeting AGO1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-1252-5P | 100.00 | 69.80 | 2774 |
| HSA-MIR-4747-5P | 100.00 | 67.90 | 2681 |
| HSA-MIR-5196-5P | 100.00 | 67.98 | 2761 |
| HSA-MIR-4533 | 100.00 | 69.48 | 2758 |
| HSA-MIR-4692 | 100.00 | 67.32 | 2066 |
| HSA-MIR-3925-3P | 100.00 | 69.95 | 1237 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-12118 | 100.00 | 65.88 | 1270 |
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-6873-3P | 100.00 | 71.42 | 2626 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-3162-3P | 100.00 | 65.37 | 363 |
| HSA-MIR-188-3P | 100.00 | 68.76 | 1240 |
| HSA-MIR-4768-5P | 100.00 | 69.49 | 2861 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-1184 | 99.99 | 68.19 | 1458 |
| HSA-MIR-4514 | 99.99 | 67.10 | 1870 |
| HSA-MIR-6870-5P | 99.99 | 68.55 | 2115 |
| HSA-MIR-371A-3P | 99.99 | 66.77 | 91 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-3667-3P | 99.99 | 67.17 | 1636 |
| HSA-MIR-513B-5P | 99.99 | 69.96 | 2150 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
| HSA-MIR-103A-3P | 99.98 | 69.14 | 1595 |
| HSA-MIR-107 | 99.98 | 69.14 | 1595 |
Literature-anchored findings (GeneRIF, showing 40)
- describes cloning rat sequence and used RNA interference to show that the GERp95 orthologue in C. elegans is important for maturation of germ-line stem cells in the gonad. (PMID:10512872)
- 2.6 A crystal structure of the PAZ domain from human Argonaute eIF2c1 bound to both ends of a 9-mer siRNA-like duplex (PMID:15152257)
- These results establish a connection between RNA interference components AGO1 and TRBP2, RNAPII transcription and Polycomb-regulated control of gene expression. (PMID:16936726)
- AGO1 and AGO2 associate with promoter DNA in cells treated with antigene RNAs (agRNAs), and inhibiting expression of AGO1 or AGO2 reverses transcriptional and post-transcriptional silencing. (PMID:16936728)
- a unique amino acid sequence in human DICER protein is essential for binding to Argonaute family proteins (PMID:17482383)
- Results describe a repetitive motif within Tas3, termed the ‘Argonaute hook’, that is conserved from yeast to humans and binds Ago1 and 2 through their PIWI domains in vitro and in vivo. (PMID:17891150)
- Data show that Argonaute1 and 2 reside in three complexes with distinct Dicer and RNA-induced silencing complex activities, and that the putative RNA-binding protein RBM4 is required for microRNA-guided gene regulation. (PMID:17932509)
- findings show that miRNA function is effected by AGO1-GW182 complexes and the role of GW182 in silencing goes beyond promoting deadenylation (PMID:18345015)
- The specificity of RNA interference depends on the concentration of Ago1, Ago3, and Ago4 relative to Ago2. (PMID:18771919)
- EIF2C1 protein expressed during the differentiation of N-type and S-type cells decreased from one of I-type cells to the central period of differentiation. (PMID:19393748)
- Data show that Ago1 and Ago2 (which encode argonautes, the key proteins forming the RNA-induced silencing complex (RISC)) had significantly higher expression levels in ER- than in ER+ breast cancer. (PMID:19723326)
- Study analyzed the association of Argonaute/EIF2C-miRNA complexes with target mRNAs and the degradation of these messages. (PMID:19767416)
- The authors demonstrate that AGO1 uses only miRNA duplexes when assembling translational repression-competent complexes, whereas AGO2 can use both miRNA and siRNA duplexes. (PMID:19946268)
- These data suggest that Axl acts as a tumor lymphatic metastasis-associated gene, and may function partly through the regulation of Cyr61. (PMID:20721975)
- Data show that Ago1, but not Ago2, overexpression in neuroblastoma cells causes slowing of the cell cycle, decreased cellular motility, and a stronger apoptotic response to UV. (PMID:21846468)
- DGCR8, AGO1, AGO2, PACT, and TARBP1 expression levels were significantly higher in the epithelial skin cancer groups than the healthy controls (P > 0.05). (PMID:22025453)
- Mammalian PUM2-Ago-eEF1A inhibited translation of nonadenylated and polyadenylated reporter mRNAs in vitro. (PMID:22231398)
- Ago3 is able to load microRNAs efficiently in the absence of Ago1 and Ago2, despite a significant loss of global microRNA expression (PMID:22474261)
- Drosha, Dicer, Argonaute 1, and Argonaute 2 are differentially expressed at different metastatic sites in ovarian carcinoma compared with primary carcinomas. (PMID:22647351)
- Study observed a dramatic difference in AGO1 and AGO2 associated miRNA profiles in blood plasma. The lack of correlation between AGO1 and AGO2 miRNA content in the plasma can be explained by the fact that many tissues contribute to the extracellular miRNA content. (PMID:22858679)
- AGO1 and AGO2 proteins couple RNA polymerase II elongation to chromatin modification (PMID:22961379)
- Ago2 and Ago1 can slice, and thus functionally bind, preannealed siRNA-mRNA duplexes. (PMID:23019594)
- Tumor xenografts and human cancer specimens indicate that AGO1-mediated translational desuppression of VEGF may be associated with tumor angiogenesis and poor prognosis. (PMID:23426184)
- PIWI-domain mutations in Ago1 may misarrange the catalytic center. Replacing Ago1 cluster 2 by the sequence found in Ago2 fully activated the Ago1 PIWI domain only when the Ago1 PIWI domain was placed into the Ago2 backbone. (PMID:23665583)
- Aberrant expression of argonaute-1/-2 in human renal cell carcinoma is possibly involved with tumorigenesis and prognosis. (PMID:23696926)
- Completion of the tetrad, combined with a mutation on a loop adjacent to the active site of hAgo1, results in slicer activity that is substantially enhanced by swapping in the N domain of hAgo2. (PMID:23746446)
- The Ago1 N domain performed best when juxtaposed with cognate PAZ and MID. This exemplifies the importance of proper intermolecular-domain interactions. (PMID:23748378)
- Evolutionary amino acid changes to hAGO1 were readily reversible, suggesting that loading of guide RNA and pairing of seed-based miRNA and target RNA constrain its sequence drift. (PMID:23809764)
- nuclear Ago1 directly interacts with RNA Polymerase II and is widely associated with chromosomal loci throughout the genome with preferential enrichment in promoters of transcriptionally active genes (PMID:24086155)
- Argonaute-1 binds transcriptional enhancers and controls constitutive and alternative splicing (PMID:25313066)
- EIF2C2, Dicer, and Drosha are more highly expressed in bladder carcinoma, promote the development of bladder cancer, and suggested a poor prognosis (PMID:25656609)
- Blocking AGO1, AGO2, or TRBP expression changes expression levels and nuclear distribution of RNAi factors Dicer, TNRC6A (GW182), and TRBP. (PMID:26242502)
- Low AGO1 expression is associated with melanoma. (PMID:27518285)
- We selected five single nucleotide polymorphisms (SNPs) (rs7813, rs2740349, rs2291778, rs910924, rs595961) in two key microRNA biosynthesis genes (GEMIN4 and AGO1) and systematically evaluated the association between these SNPs, the gene-environment interaction and lung cancer risk. This is the first study showing that rs7813 and rs595961 could be meaningful as genetic markers for lung cancer risk. (PMID:27669275)
- E-cadherin silencing relies on the formation of a complex between the paRNA and microRNA-guided Argonaute 1 that, together, recruit SUV39H1 and induce repressive chromatin modifications in the gene promoter (PMID:28555645)
- In miRNA-mediated gene silencing, the physical interaction between human Argonaute (hAgo) and GW182 (hGW182) is essential for facilitating the downstream silencing of the targeted mRNA. hGW182 can recruit up to three copies of hAgo via its three GW motifs. This may explain the observed cooperativity in miRNA-mediated gene silencing. (PMID:28781232)
- the polymorphisms of the AGO1 and AGO2 genes, the expression levels of which correlated with the proportion of Th17 cells, were associated with the development and prognosis of Graves’ disease. (PMID:29256262)
- AGO1 may promote hepatocellular carcinoma metastasis through TGF-beta pathway. (PMID:29487329)
- AGO1 missense mutation was identified in a patient with syndromic form of intellectual disability/autism spectrum disorder. (PMID:30213762)
- Effects of the PIWI/MID domain of Argonaute protein on the association of miRNAi’s seed base with the target have been reported. (PMID:30770397)
Cross-species orthologs
13 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ago1 | ENSDARG00000092644 |
| mus_musculus | Ago1 | ENSMUSG00000041530 |
| rattus_norvegicus | Ago1 | ENSRNOG00000055915 |
| caenorhabditis_elegans | ppw-1 | WBGENE00004093 |
| caenorhabditis_elegans | ppw-2 | WBGENE00004094 |
| caenorhabditis_elegans | WBGENE00006449 | |
| caenorhabditis_elegans | WBGENE00007624 | |
| caenorhabditis_elegans | WBGENE00010263 | |
| caenorhabditis_elegans | wago-1 | WBGENE00011061 |
| caenorhabditis_elegans | WBGENE00011910 | |
| caenorhabditis_elegans | sago-2 | WBGENE00018921 |
| caenorhabditis_elegans | WBGENE00020707 | |
| caenorhabditis_elegans | WBGENE00022877 |
Paralogs (3): AGO2 (ENSG00000123908), AGO3 (ENSG00000126070), AGO4 (ENSG00000134698)
Protein
Protein identifiers
Protein argonaute-1 — Q9UL18 (reviewed: Q9UL18)
Alternative names: Argonaute RISC catalytic component 1, Eukaryotic translation initiation factor 2C 1, Putative RNA-binding protein Q99
All UniProt accessions (8): Q9UL18, A0A0U1RQZ8, A0A6I8PTZ8, A0A8V8TNY0, A0A8V8TPF2, A0A8V8TQA7, A0A8V8TQN5, Q5TA58
UniProt curated annotations — full annotation on UniProt →
Function. Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) or short interfering RNAs (siRNAs), and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs. Also required for transcriptional gene silencing (TGS) of promoter regions which are complementary to bound short antigene RNAs (agRNAs).
Subunit / interactions. Interacts with DDB1, DDX5, DDX6, DHX30, DHX36, DDX47, DICER1, AGO2, ELAVL1, HNRNPF, IGF2BP1, ILF3, IMP8, MATR3, MOV10, PABPC1, PRMT5, RBM4, SART3, TNRC6B, UPF1 and YBX1. Associates with polysomes and messenger ribonucleoproteins (mNRPs). Interacts with LIMD1, WTIP and AJUBA. Interacts with APOBEC3F, APOBEC3G and APOBEC3H.
Subcellular location. Cytoplasm. P-body.
Post-translational modifications. Ubiquitinated on surface-exposed lysines by a SCF-like E3 ubiquitin-protein ligase complex containing ZSWIM8 during target-directed microRNA degradation (TDMD), a process that mediates degradation of microRNAs (miRNAs). Ubiquitination by the SCF-like E3 ubiquitin-protein ligase complex containing ZSWIM8 leads to its subsequent degradation, thereby exposing miRNAs for degradation. ZSWIM8 recognizes and binds AGO1 when it is engaged with a TDMD target.
Disease relevance. Neurodevelopmental disorder with language delay and behavioral abnormalities, with or without seizures (NEDLBAS) [MIM:620292] An autosomal dominant neurodevelopmental disorder characterized by global developmental delay with intellectual disability of varying severity, speech and motor delay, and behavioral abnormalities, including autistic features. About half of patients develop seizures. The disease is caused by variants affecting the gene represented in this entry.
Miscellaneous. Lacks RNA cleavage activity due to the absence of the conserved His at position 805, but also because it binds the RNA in a subtly different manner that precludes efficient cleavage.
Similarity. Belongs to the argonaute family. Ago subfamily.
RefSeq proteins (3): NP_001304051, NP_001304052, NP_036331* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR003100 | PAZ_dom | Domain |
| IPR003165 | Piwi | Domain |
| IPR012337 | RNaseH-like_sf | Homologous_superfamily |
| IPR014811 | ArgoL1 | Domain |
| IPR032472 | ArgoL2 | Domain |
| IPR032473 | Argonaute_Mid_dom | Domain |
| IPR032474 | Argonaute_N | Domain |
| IPR036085 | PAZ_dom_sf | Homologous_superfamily |
| IPR036397 | RNaseH_sf | Homologous_superfamily |
| IPR045246 | Piwi_ago-like | Domain |
Pfam: PF02170, PF02171, PF08699, PF16486, PF16487, PF16488
UniProt features (104 total): strand 36, helix 29, sequence variant 17, turn 8, region of interest 6, mutagenesis site 4, domain 2, chain 1, sequence conflict 1
Structure
Experimental structures (PDB)
8 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 4KRE | X-RAY DIFFRACTION | 1.75 |
| 4KRF | X-RAY DIFFRACTION | 2.1 |
| 4KXT | X-RAY DIFFRACTION | 2.29 |
| 1SI2 | X-RAY DIFFRACTION | 2.6 |
| 1SI3 | X-RAY DIFFRACTION | 2.6 |
| 5W6V | X-RAY DIFFRACTION | 2.83 |
| 9Q3F | ELECTRON MICROSCOPY | 3.3 |
| 9Q3G | ELECTRON MICROSCOPY | 3.3 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9UL18-F1 | 91.45 | 0.80 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Mutagenesis-validated functional residues (4):
| Position | Phenotype |
|---|---|
| 670 | confers modest rna cleavage activity; when associated with q-675 and h-805. |
| 674 | confers modest rna cleavage activity; when associated with h-805. |
| 675 | does not confer enzyme activity by itself. confers low rna cleavage activity; when associated with h-805. confers modest |
| 805 | does not confer enzyme activity by itself. confers modest rna cleavage activity; when associated with f-674. |
Function
Pathways and Gene Ontology
Reactome pathways
66 pathways
| ID | Pathway |
|---|---|
| R-HSA-165159 | MTOR signalling |
| R-HSA-1912408 | Pre-NOTCH Transcription and Translation |
| R-HSA-203927 | MicroRNA (miRNA) biogenesis |
| R-HSA-2559580 | Oxidative Stress Induced Senescence |
| R-HSA-2559585 | Oncogene Induced Senescence |
| R-HSA-4086398 | Ca2+ pathway |
| R-HSA-426486 | Small interfering RNA (siRNA) biogenesis |
| R-HSA-426496 | Post-transcriptional silencing by small RNAs |
| R-HSA-5578749 | Transcriptional regulation by small RNAs |
| R-HSA-5628897 | TP53 Regulates Metabolic Genes |
| R-HSA-5687128 | MAPK6/MAPK4 signaling |
| R-HSA-8853884 | Transcriptional Regulation by VENTX |
| R-HSA-8934593 | Regulation of RUNX1 Expression and Activity |
| R-HSA-8936459 | RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function |
| R-HSA-8943723 | Regulation of PTEN mRNA translation |
| R-HSA-8948700 | Competing endogenous RNAs (ceRNAs) regulate PTEN translation |
| R-HSA-8986944 | Transcriptional Regulation by MECP2 |
| R-HSA-9018519 | Estrogen-dependent gene expression |
| R-HSA-9022692 | Regulation of MECP2 expression and activity |
| R-HSA-9029569 | NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux |
| R-HSA-9725371 | Nuclear events stimulated by ALK signaling in cancer |
| R-HSA-9759811 | Regulation of CDH11 mRNA translation by microRNAs |
| R-HSA-9764562 | Regulation of CDH1 mRNA translation by microRNAs |
| R-HSA-9768778 | Regulation of NPAS4 mRNA translation |
| R-HSA-9824594 | Regulation of MITF-M-dependent genes involved in apoptosis |
| R-HSA-9839394 | TGFBR3 expression |
| R-HSA-9909620 | Regulation of PD-L1(CD274) translation |
| R-HSA-1257604 | PIP3 activates AKT signaling |
| R-HSA-1266738 | Developmental Biology |
| R-HSA-1500931 | Cell-Cell communication |
MSigDB gene sets: 505 (showing top):
TGGTGCT_MIR29A_MIR29B_MIR29C, AGGAAGC_MIR5163P, MYAATNNNNNNNGGC_UNKNOWN, REACTOME_SIGNALING_BY_NOTCH, GOMF_ENDONUCLEASE_ACTIVITY, GOMF_RNA_NUCLEASE_ACTIVITY, MYOGENIN_Q6, TGCGCANK_UNKNOWN, REACTOME_ADAPTIVE_IMMUNE_SYSTEM, GOBP_REGULATION_OF_MRNA_CATABOLIC_PROCESS, TGCTGCT_MIR15A_MIR16_MIR15B_MIR195_MIR424_MIR497, TGCACTT_MIR519C_MIR519B_MIR519A, GOMF_NUCLEASE_ACTIVITY, AAGTCCA_MIR422B_MIR422A, TTTGTAG_MIR520D
GO Biological Process (14): nuclear-transcribed mRNA catabolic process (GO:0000956), miRNA metabolic process (GO:0010586), positive regulation of gene expression (GO:0010628), negative regulation of angiogenesis (GO:0016525), pre-miRNA processing (GO:0031054), regulatory ncRNA-mediated post-transcriptional gene silencing (GO:0035194), miRNA processing (GO:0035196), miRNA-mediated gene silencing by inhibition of translation (GO:0035278), regulation of mRNA stability (GO:0043488), positive regulation of transcription by RNA polymerase II (GO:0045944), RISC complex assembly (GO:0070922), positive regulation of non-canonical NF-kappaB signal transduction (GO:1901224), regulation of translation (GO:0006417), regulatory ncRNA-mediated gene silencing (GO:0031047)
GO Molecular Function (11): RNA polymerase II cis-regulatory region sequence-specific DNA binding (GO:0000978), RNA polymerase II complex binding (GO:0000993), core promoter sequence-specific DNA binding (GO:0001046), RNA binding (GO:0003723), double-stranded RNA binding (GO:0003725), single-stranded RNA binding (GO:0003727), miRNA binding (GO:0035198), transcription cis-regulatory region binding (GO:0000976), nucleic acid binding (GO:0003676), protein binding (GO:0005515), regulatory RNA binding (GO:0061980)
GO Cellular Component (9): P-body (GO:0000932), nucleus (GO:0005634), nucleoplasm (GO:0005654), cytoplasm (GO:0005737), cytosol (GO:0005829), RISC complex (GO:0016442), cytoplasmic ribonucleoprotein granule (GO:0036464), RISC-loading complex (GO:0070578), ribonucleoprotein complex (GO:1990904)
Reactome top-level categories
Rollup of top-14 pathways:
| Category | Pathways |
|---|---|
| Gene Silencing by RNA | 4 |
| Cellular Senescence | 2 |
| Generic Transcription Pathway | 2 |
| Transcriptional regulation by RUNX1 | 2 |
| Signal Transduction | 1 |
| Pre-NOTCH Expression and Processing | 1 |
| Beta-catenin independent WNT signaling | 1 |
| Transcriptional Regulation by TP53 | 1 |
| MAPK family signaling cascades | 1 |
| PTEN Regulation | 1 |
| Regulation of PTEN mRNA translation | 1 |
| ESR-mediated signaling | 1 |
| Transcriptional Regulation by MECP2 | 1 |
| NR1H2 and NR1H3-mediated signaling | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| RNA binding | 3 |
| cellular anatomical structure | 3 |
| regulatory ncRNA-mediated gene silencing | 2 |
| binding | 2 |
| cytoplasm | 2 |
| mRNA catabolic process | 1 |
| RNA metabolic process | 1 |
| gene expression | 1 |
| regulation of gene expression | 1 |
| positive regulation of macromolecule biosynthetic process | 1 |
| angiogenesis | 1 |
| regulation of angiogenesis | 1 |
| negative regulation of blood vessel morphogenesis | 1 |
| miRNA processing | 1 |
| post-transcriptional gene silencing | 1 |
| regulatory ncRNA processing | 1 |
| negative regulation of translation | 1 |
| miRNA-mediated post-transcriptional gene silencing | 1 |
| regulation of RNA stability | 1 |
| regulation of mRNA catabolic process | 1 |
| regulation of transcription by RNA polymerase II | 1 |
| transcription by RNA polymerase II | 1 |
| positive regulation of DNA-templated transcription | 1 |
| protein-RNA complex assembly | 1 |
| non-canonical NF-kappaB signal transduction | 1 |
| regulation of non-canonical NF-kappaB signal transduction | 1 |
| positive regulation of intracellular signal transduction | 1 |
| translation | 1 |
| post-transcriptional regulation of gene expression | 1 |
| regulation of protein metabolic process | 1 |
| negative regulation of gene expression | 1 |
| RNA polymerase II transcription regulatory region sequence-specific DNA binding | 1 |
| cis-regulatory region sequence-specific DNA binding | 1 |
| RNA polymerase core enzyme binding | 1 |
| transcription cis-regulatory region binding | 1 |
| nucleic acid binding | 1 |
| regulatory RNA binding | 1 |
| transcription regulatory region nucleic acid binding | 1 |
| sequence-specific double-stranded DNA binding | 1 |
| cytoplasmic ribonucleoprotein granule | 1 |
Protein interactions and networks
STRING
2578 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| AGO1 | DICER1 | Q9UPY3 | 999 |
| AGO1 | TNRC6A | Q8NDV7 | 998 |
| AGO1 | AGO2 | Q9UKV8 | 982 |
| AGO1 | DDX6 | P26196 | 978 |
| AGO1 | AGO4 | Q9HCK5 | 975 |
| AGO1 | FMR1 | Q06787 | 971 |
| AGO1 | MOV10 | Q9HCE1 | 968 |
| AGO1 | TARBP2 | Q15633 | 963 |
| AGO1 | TNRC6B | Q9UPQ9 | 948 |
| AGO1 | DROSHA | Q9NRR4 | 939 |
| AGO1 | DDX20 | Q9UHI6 | 927 |
| AGO1 | HSP90AA1 | P07900 | 916 |
| AGO1 | TRIM32 | Q13049 | 881 |
| AGO1 | AGO3 | Q9H9G7 | 858 |
| AGO1 | HDAC1 | Q13547 | 853 |
IntAct
88 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| TNRC6A | AGO2 | psi-mi:“MI:0914”(association) | 0.960 |
| AGO1 | TNRC6A | psi-mi:“MI:0914”(association) | 0.900 |
| TNRC6A | AGO1 | psi-mi:“MI:0915”(physical association) | 0.900 |
| TNRC6A | AGO1 | psi-mi:“MI:0403”(colocalization) | 0.900 |
| AGO1 | DICER1 | psi-mi:“MI:0915”(physical association) | 0.830 |
| AGO2 | DDX6 | psi-mi:“MI:0914”(association) | 0.810 |
| AGO1 | HSP90AB1 | psi-mi:“MI:0915”(physical association) | 0.740 |
| H2AX | PPM1G | psi-mi:“MI:0914”(association) | 0.730 |
| AGO2 | AGO1 | psi-mi:“MI:0407”(direct interaction) | 0.720 |
| AGO1 | TNRC6B | psi-mi:“MI:0407”(direct interaction) | 0.680 |
| AGO1 | TNRC6B | psi-mi:“MI:0915”(physical association) | 0.680 |
| AGO1 | TNRC6B | psi-mi:“MI:0403”(colocalization) | 0.680 |
| DNAJC7 | PLD2 | psi-mi:“MI:0914”(association) | 0.640 |
| PABPC1 | AGO2 | psi-mi:“MI:0914”(association) | 0.640 |
| PPP5C | AGO1 | psi-mi:“MI:0915”(physical association) | 0.620 |
| PRNP | AGO1 | psi-mi:“MI:0915”(physical association) | 0.610 |
| AGO1 | TNRC6C | psi-mi:“MI:0915”(physical association) | 0.600 |
| AGO1 | TNRC6C | psi-mi:“MI:0403”(colocalization) | 0.600 |
| PPP5C | IRS4 | psi-mi:“MI:0914”(association) | 0.570 |
| AGO1 | LIMD1 | psi-mi:“MI:0915”(physical association) | 0.570 |
| AGO1 | LIMD1 | psi-mi:“MI:0407”(direct interaction) | 0.570 |
| AGO1 | LIMD1 | psi-mi:“MI:0403”(colocalization) | 0.570 |
| AGO2 | FKBP5 | psi-mi:“MI:0914”(association) | 0.530 |
| AGO1 | AIP | psi-mi:“MI:0914”(association) | 0.530 |
| TRMT13 | STAG1 | psi-mi:“MI:0914”(association) | 0.530 |
BioGRID (256): AGO1 (Affinity Capture-RNA), AGO1 (Affinity Capture-RNA), AGO1 (Affinity Capture-MS), AGO1 (Co-fractionation), AGO1 (Reconstituted Complex), CYLD (Affinity Capture-RNA), TAX1BP1 (Affinity Capture-RNA), OTUD7B (Affinity Capture-RNA), AGO1 (Affinity Capture-MS), AGO1 (Affinity Capture-MS), AGO1 (Affinity Capture-MS), AGO1 (Affinity Capture-MS), AGO1 (Affinity Capture-Western), AGO1 (Affinity Capture-MS), AGO1 (Affinity Capture-MS)
ESM2 similar proteins: A2CEI6, A3KPK0, A6P7L8, A8D8P8, A8KBF3, A9ZSZ2, O04379, O48771, O76922, O77503, O89040, Q0JF58, Q4G033, Q4KLV6, Q5NBN9, Q5Z5B2, Q5ZLG4, Q5ZMW0, Q69VD5, Q6DCX2, Q6DJB9, Q6EU14, Q6K972, Q6QME8, Q6T5B7, Q6YSJ5, Q6Z4F1, Q7PLK0, Q7XSA2, Q7Y001, Q7Z3Z3, Q7Z3Z4, Q84VQ0, Q851R2, Q8CDG1, Q8CGT6, Q8CJF8, Q8CJF9, Q8CJG0, Q8CJG1
Diamond homologs: A3KPK0, O04379, O48771, O74957, O77503, P34681, Q0JF58, Q10F39, Q4KLV6, Q5NBN9, Q5Z5B2, Q5ZLG4, Q5ZMW0, Q69UP6, Q69VD5, Q6DCX2, Q6DJB9, Q6EU14, Q6H6C3, Q6K972, Q6QME8, Q6T5B7, Q6YSJ5, Q6Z4F1, Q75HC2, Q7XSA2, Q7XTS3, Q7XTS4, Q7Y001, Q84VQ0, Q851R2, Q852N2, Q8CJF8, Q8CJF9, Q8CJG0, Q8CJG1, Q9C793, Q9H9G7, Q9HCK5, Q9QZ81
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 86 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Regulation of MITF-M-dependent genes involved in apoptosis | 6 | 57.7× | 6e-08 |
| Regulation of RUNX1 Expression and Activity | 5 | 50.9× | 2e-06 |
| TGFBR3 expression | 5 | 34.6× | 1e-05 |
| Regulation of MECP2 expression and activity | 5 | 27.9× | 3e-05 |
| Transcriptional Regulation by MECP2 | 5 | 24.0× | 6e-05 |
| NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux | 5 | 23.4× | 7e-05 |
| MTOR signalling | 5 | 20.1× | 1e-04 |
| Transcriptional Regulation by VENTX | 5 | 20.1× | 1e-04 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| miRNA-mediated gene silencing by inhibition of translation | 8 | 88.7× | 1e-11 |
| positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 6 | 84.3× | 8e-09 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
191 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 13 |
| Uncertain significance | 123 |
| Likely benign | 19 |
| Benign | 7 |
Top pathogenic / likely-pathogenic (14)
| Variant ID | HGVS | Classification |
|---|---|---|
| 976687 | NM_012199.5(AGO1):c.650-2A>G | Pathogenic |
| 1299669 | NM_012199.5(AGO1):c.583G>A (p.Glu195Lys) | Likely pathogenic |
| 1300187 | NM_012199.5(AGO1):c.2252A>T (p.His751Leu) | Likely pathogenic |
| 1300188 | NM_012199.5(AGO1):c.2389A>T (p.Ile797Phe) | Likely pathogenic |
| 148904 | GRCh38/hg38 1p34.3(chr1:34753938-36055310)x1 | Likely pathogenic |
| 1750732 | NM_012199.5(AGO1):c.595G>T (p.Gly199Cys) | Likely pathogenic |
| 2531391 | NM_012199.5(AGO1):c.1354G>A (p.Ala452Thr) | Likely pathogenic |
| 3254954 | NM_012199.5(AGO1):c.1249C>A (p.Gln417Lys) | Likely pathogenic |
| 3276168 | NM_012199.5(AGO1):c.1066G>A (p.Asp356Asn) | Likely pathogenic |
| 3366942 | NM_012199.5(AGO1):c.1594C>T (p.Arg532Cys) | Likely pathogenic |
| 4024530 | NM_012199.5(AGO1):c.2466-1G>A | Likely pathogenic |
| 4082190 | NM_012199.5(AGO1):c.1067A>G (p.Asp356Gly) | Likely pathogenic |
| 547981 | NM_012199.5(AGO1):c.566C>T (p.Pro189Leu) | Likely pathogenic |
| 984614 | NM_012199.5(AGO1):c.569T>C (p.Leu190Pro) | Likely pathogenic |
SpliceAI
3319 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:35888426:GCT:G | acceptor_gain | 1.0000 |
| 1:35888607:ACCGG:A | donor_loss | 1.0000 |
| 1:35888608:CCG:C | donor_gain | 1.0000 |
| 1:35888608:CCGG:C | donor_loss | 1.0000 |
| 1:35888609:CGGT:C | donor_loss | 1.0000 |
| 1:35888610:GGT:G | donor_loss | 1.0000 |
| 1:35888611:G:GA | donor_loss | 1.0000 |
| 1:35888611:G:GG | donor_gain | 1.0000 |
| 1:35888612:T:TC | donor_loss | 1.0000 |
| 1:35892556:GGGAA:G | acceptor_gain | 1.0000 |
| 1:35892676:GG:G | donor_gain | 1.0000 |
| 1:35892677:GG:G | donor_gain | 1.0000 |
| 1:35892677:GGTAA:G | donor_loss | 1.0000 |
| 1:35892678:G:GA | donor_loss | 1.0000 |
| 1:35892678:G:GG | donor_gain | 1.0000 |
| 1:35892679:TAA:T | donor_loss | 1.0000 |
| 1:35893085:A:AG | acceptor_gain | 1.0000 |
| 1:35893086:C:G | acceptor_gain | 1.0000 |
| 1:35893092:T:A | acceptor_gain | 1.0000 |
| 1:35894034:CA:C | acceptor_loss | 1.0000 |
| 1:35894035:A:AG | acceptor_gain | 1.0000 |
| 1:35894036:G:GC | acceptor_gain | 1.0000 |
| 1:35894036:GT:G | acceptor_gain | 1.0000 |
| 1:35894036:GTC:G | acceptor_gain | 1.0000 |
| 1:35894036:GTCT:G | acceptor_gain | 1.0000 |
| 1:35894036:GTCTC:G | acceptor_gain | 1.0000 |
| 1:35894168:AAGGG:A | donor_loss | 1.0000 |
| 1:35894169:AGGGT:A | donor_loss | 1.0000 |
| 1:35894170:GG:G | donor_gain | 1.0000 |
| 1:35894171:GG:G | donor_gain | 1.0000 |
AlphaMissense
5619 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 1:35888524:T:A | N41K | 1.000 |
| 1:35888524:T:G | N41K | 1.000 |
| 1:35888610:G:C | R70P | 1.000 |
| 1:35892624:G:C | D93H | 1.000 |
| 1:35892625:A:T | D93V | 1.000 |
| 1:35892627:G:A | G94R | 1.000 |
| 1:35892627:G:C | G94R | 1.000 |
| 1:35892628:G:A | G94E | 1.000 |
| 1:35892628:G:T | G94V | 1.000 |
| 1:35892642:T:G | Y99D | 1.000 |
| 1:35893142:T:C | F126L | 1.000 |
| 1:35893143:T:C | F126S | 1.000 |
| 1:35893144:T:A | F126L | 1.000 |
| 1:35893144:T:G | F126L | 1.000 |
| 1:35893149:T:A | V128D | 1.000 |
| 1:35893699:T:C | F180L | 1.000 |
| 1:35893701:C:A | F180L | 1.000 |
| 1:35893701:C:G | F180L | 1.000 |
| 1:35893756:G:C | G199R | 1.000 |
| 1:35893757:G:A | G199D | 1.000 |
| 1:35893757:G:T | G199V | 1.000 |
| 1:35893799:T:C | L213P | 1.000 |
| 1:35894049:C:A | A221D | 1.000 |
| 1:35894051:T:C | F222L | 1.000 |
| 1:35894053:T:A | F222L | 1.000 |
| 1:35894053:T:G | F222L | 1.000 |
| 1:35894145:G:C | R253P | 1.000 |
| 1:35894154:T:C | F256S | 1.000 |
| 1:35894318:T:C | L263P | 1.000 |
| 1:35894324:T:A | V265E | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000050388 (1:35928283 T>C), RS1000051127 (1:35897989 T>C), RS1000081545 (1:35879968 T>A), RS1000206497 (1:35924089 G>A), RS1000221753 (1:35893252 G>A), RS1000242529 (1:35870569 A>C), RS1000280959 (1:35930003 T>A,C,G), RS1000374151 (1:35930873 G>A,C), RS1000404100 (1:35925005 C>G), RS1000435153 (1:35924744 G>A), RS1000444839 (1:35890351 A>C,G,T), RS1000466575 (1:35900427 T>C), RS1000473891 (1:35930134 C>T), RS1000485133 (1:35880324 G>A), RS1000571739 (1:35873843 A>C)
Disease associations
OMIM: gene MIM:606228 | disease phenotypes: MIM:620292
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| neurodevelopmental disorder with language delay and behavioral abnormalities, with or without seizures | Strong | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| complex neurodevelopmental disorder | Definitive | AD |
Mondo (3): intellectual disability (MONDO:0001071), neurodevelopmental disorder with language delay and behavioral abnormalities, with or without seizures (MONDO:0859531), neurodevelopmental disorder (MONDO:0700092)
Orphanet (1): NON RARE IN EUROPE: Unexplained intellectual disability (Orphanet:319658)
HPO phenotypes
37 total (30 of 37 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000219 | Thin upper lip vermilion |
| HP:0000286 | Epicanthus |
| HP:0000311 | Round face |
| HP:0000348 | High forehead |
| HP:0000400 | Macrotia |
| HP:0000414 | Bulbous nose |
| HP:0000431 | Wide nasal bridge |
| HP:0000486 | Strabismus |
| HP:0000494 | Downslanted palpebral fissures |
| HP:0000506 | Telecanthus |
| HP:0000718 | Aggressive behavior |
| HP:0000729 | Autistic behavior |
| HP:0000733 | Motor stereotypy |
| HP:0000739 | Anxiety |
| HP:0000750 | Delayed speech and language development |
| HP:0000752 | Hyperactivity |
| HP:0001249 | Intellectual disability |
| HP:0001250 | Seizure |
| HP:0001252 | Hypotonia |
| HP:0001263 | Global developmental delay |
| HP:0001270 | Motor delay |
| HP:0002020 | Gastroesophageal reflux |
| HP:0002069 | Bilateral tonic-clonic seizure |
| HP:0002133 | Status epilepticus |
| HP:0002342 | Moderate intellectual disability |
| HP:0002360 | Sleep disturbance |
| HP:0002373 | Febrile seizure (within the age range of 3 months to 6 years) |
| HP:0002384 | Focal impaired awareness seizure |
| HP:0003196 | Short nose |
GWAS associations
1 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST012047_1 | Fasting glucose | 9.000000e-07 |
MeSH disease descriptors (2)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D008607 | Intellectual Disability | C10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539 |
| D065886 | Neurodevelopmental Disorders | F03.625 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs595961 | AGO1 | 0.00 | 0 |
CTD chemical–gene interactions
36 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | affects binding, increases reaction, decreases expression | 2 |
| Cisplatin | affects cotreatment, increases expression, decreases expression | 2 |
| Dronabinol | increases expression | 2 |
| Tretinoin | increases expression | 2 |
| Aflatoxin B1 | decreases methylation, increases methylation | 2 |
| dicrotophos | increases expression | 1 |
| methylmercuric chloride | decreases expression | 1 |
| cobaltous chloride | decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| ICG 001 | increases expression | 1 |
| abrine | decreases expression | 1 |
| Grape Seed Proanthocyanidins | affects cotreatment, increases expression | 1 |
| jinfukang | affects cotreatment, increases expression | 1 |
| LDN 193189 | affects cotreatment, increases expression | 1 |
| (+)-JQ1 compound | increases expression | 1 |
| Vorinostat | decreases expression | 1 |
| Air Pollutants | affects response to substance | 1 |
| Vehicle Emissions | affects response to substance | 1 |
| Benzene | increases expression | 1 |
| Carbamazepine | affects expression | 1 |
| Catechin | affects cotreatment, increases expression | 1 |
| Estradiol | affects expression | 1 |
| Ivermectin | decreases expression | 1 |
| Lead | affects expression | 1 |
| Ribonucleotides | affects binding | 1 |
| Thimerosal | decreases expression | 1 |
| Thiram | decreases expression | 1 |
| Urethane | increases expression | 1 |
Cellosaurus cell lines
5 cell lines: 5 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B1J7 | Abcam HeLa AGO1 KO | Cancer cell line | Female |
| CVCL_SB94 | HAP1 AGO1 (-) 1 | Cancer cell line | Male |
| CVCL_SB95 | HAP1 AGO1 (-) 2 | Cancer cell line | Male |
| CVCL_SB96 | HAP1 AGO1 (-) 3 | Cancer cell line | Male |
| CVCL_SB97 | HAP1 AGO1 (-) 4 | Cancer cell line | Male |
Clinical trials (associated diseases)
197 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT05657860 | PHASE4 | COMPLETED | Guanfacine Extended Release for the Reduction of Aggression and Self-injurious Behavior Associated With Prader-Willi Syndrome |
| NCT05744479 | PHASE4 | RECRUITING | Metformin for Antipsychotic-induced Weight Gain in Adults With Intellectual Disability |
| NCT06107829 | PHASE4 | WITHDRAWN | Valbenazine Treatment of Tardive Dyskinesia in Adults With Intellectual/Developmental Disabilities |
| NCT06997198 | PHASE4 | NOT_YET_RECRUITING | Deutetrabenazine Treatment for Tardive Dyskinesia in Intellectual/Developmental Disabilities |
| NCT02270736 | PHASE3 | COMPLETED | Clinical Study to Investigate the Efficacy and Safety of NT 201 Compared to Placebo in the Treatment of Chronic Troublesome Drooling Associated With Neurological Disorders and/or Intellectual Disability |
| NCT02304302 | PHASE2 | COMPLETED | Down Syndrome Memantine Follow-up Study |
| NCT03862950 | PHASE2 | COMPLETED | A Trial of Metformin in Individuals With Fragile X Syndrome (Met) |
| NCT04529226 | PHASE2 | UNKNOWN | Study to Compare Clozapine vs Treatment as Usual in People With Intellectual Disability & Treatment-resistant Psychosis |
| NCT04821856 | PHASE2 | COMPLETED | Evaluation of the Effectiveness of Cannabidiol in Treating Severe Behavioural Problems in Children and Adolescents With Intellectual Disability |
| NCT05273320 | PHASE1 | COMPLETED | Clinical Trial of Nabilone for Aggression in Adults With Intellectual and Developmental Disabilities |
| NCT05301361 | PHASE1 | ENROLLING_BY_INVITATION | Sensitivity of the NIH Toolbox to Stimulant Treatment in Intellectual Disabilities |
| NCT06016764 | PHASE1 | COMPLETED | Use of MRI and cTBS for Catatonia in Autism |
| NCT06586827 | PHASE1 | COMPLETED | Impact of Competency-Based Training and Technical Assistance Employment Outcomes of Individuals With ID/DD |
| NCT07531940 | PHASE1 | NOT_YET_RECRUITING | Escalating Doses of Memantine in Down Syndrome (MEDS-123) |
| NCT03479476 | PHASE2/PHASE3 | COMPLETED | A Trial of Metformin in Individuals With Fragile X Syndrome |
| NCT02616796 | PHASE1/PHASE2 | COMPLETED | Effects of Social Gaze Training on Brain and Behavior in Fragile X Syndrome |
| NCT06860672 | EARLY_PHASE1 | RECRUITING | Clinical Trial of the Dual Vector Base Editor for the Treatment of the CHD3-R1025W Mutation |
| NCT00597948 | Not specified | COMPLETED | Healthy Lifestyles for People With Intellectual Disabilities |
| NCT01087320 | Not specified | RECRUITING | Genome Medical Sequencing for Gene Discovery |
| NCT01652963 | Not specified | UNKNOWN | Picture-based Computerised Assessment and Training of Cognitive Behaviour Therapy Skills |
| NCT01695395 | Not specified | COMPLETED | Mental Health Care Provision for Adults With Intellectual Disability and a Mental Disorder |
| NCT01867554 | Not specified | COMPLETED | Research and Characterization of New Genes Involved in Intellectual Disability |
| NCT01915381 | Not specified | COMPLETED | Improving Adherence Healthy Lifestyle With a Smartphone Application Based on Adults With Intellectual Disabilities |
| NCT01988623 | Not specified | COMPLETED | Pivotal Response Treatment for Individuals With Intellectual Disabilities |
| NCT02099773 | Not specified | COMPLETED | Support Staff-client Interactions With Augmentative and Alternative Communication |
| NCT02136849 | Not specified | COMPLETED | Inter-regional Project of the Great Western Exploration Approach for Exome Molecular Causes Severe Intellectual Disability Isolated or Syndromic |
| NCT02225041 | Not specified | COMPLETED | Sedation Strategy and Cognitive Outcome After Critical Illness in Early Childhood |
| NCT02414438 | Not specified | COMPLETED | Establishing the Clinical Utility of First StepDx PLUS and NextStepDx PLUS Study |
| NCT02451761 | Not specified | COMPLETED | Apparently Balanced Chromosomal Translocation/ Next-generation Sequencing/ Intellectual Disability |
| NCT02461420 | Not specified | ACTIVE_NOT_RECRUITING | Mapping the Genotype, Phenotype, and Natural History of Phelan-McDermid Syndrome |
| NCT02461459 | Not specified | ACTIVE_NOT_RECRUITING | Autism Spectrum Disorder (ASD) and Intellectual Disability (ID) Determinants in Tuberous Sclerosis Complex (TSC) |
| NCT02486081 | Not specified | COMPLETED | Development and Application-Smart Football for Movement Evaluation and Training in the Special Education Population |
| NCT02504502 | Not specified | COMPLETED | Enhancing Genomic Laboratory Reports to Enhance Communication and Empower Patients |
| NCT02513277 | Not specified | COMPLETED | Diabetes Screening & Prevention for People With Learning (Intellectual) Disabilities:STOP Diabetes Study |
| NCT02561754 | Not specified | COMPLETED | Weight Management for Adolescents With IDD |
| NCT02591446 | Not specified | COMPLETED | Transcranial Magnetic Stimulation Studies in Autism Spectrum Disorders |
| NCT02714868 | Not specified | COMPLETED | Evaluation of Project TEAM (Teens Making Environmental and Activity Modifications) |
| NCT02721394 | Not specified | UNKNOWN | FCT With Young Children With ID in the UK: A Feasibility Project V.1 |
| NCT02746614 | Not specified | COMPLETED | Psychomotor Therapy Effects in Adaptive Behavior and Motor Proficiency in Intellectual Disability |
| NCT02836405 | Not specified | COMPLETED | TMS for the Investigation of Brain Plasticity in Autism Spectrum Disorders |
Related Atlas pages
- Associated diseases: neurodevelopmental disorder with language delay and behavioral abnormalities, with or without seizures, complex neurodevelopmental disorder
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): neurodevelopmental disorder with language delay and behavioral abnormalities, with or without seizures