AGPS-DT

Summary

AGPS-DT (AGPS divergent transcript, HGNC:49277) is a long non-coding RNA gene on chromosome 2q31.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49277
Approved symbol	AGPS-DT
Name	AGPS divergent transcript
Location	2q31.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC019080.1
Ensembl gene	ENSG00000213963
Ensembl biotype	lncRNA
Entrez	100130691

Gene structure

Transcript identifiers

Ensembl transcripts: 48 — 48 lncRNA

ENST00000397057, ENST00000430416, ENST00000443132, ENST00000447413, ENST00000456746, ENST00000611493, ENST00000625449, ENST00000627798, ENST00000699440, ENST00000699441, ENST00000699442, ENST00000699443, ENST00000699444, ENST00000699445, ENST00000699446, ENST00000699447, ENST00000699448, ENST00000699449, ENST00000699450, ENST00000699451, ENST00000699452, ENST00000699453, ENST00000699473, ENST00000699474, ENST00000699475, ENST00000699476, ENST00000699477, ENST00000699478, ENST00000699479, ENST00000699480, ENST00000699481, ENST00000699482, ENST00000699494, ENST00000699495, ENST00000699496, ENST00000699497, ENST00000699498, ENST00000699499, ENST00000699500, ENST00000699501, ENST00000699502, ENST00000699503, ENST00000699504, ENST00000699505, ENST00000699506, ENST00000699507, ENST00000699508, ENST00000699509

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000397057 — 9 exons

Exon	Start	End
ENSE00001527149	177392573	177392687
ENSE00001614766	177283508	177287834
ENSE00003976695	177332142	177332251
ENSE00003976702	177338598	177338699
ENSE00003976708	177311233	177311328
ENSE00003976711	177331572	177331656
ENSE00003976713	177310964	177311035
ENSE00003976715	177323239	177323396
ENSE00003976722	177334393	177334529

Expression profiles

Bgee: expression breadth ubiquitous, 177 present calls, max score 91.54.

Top tissues by expression

244 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
kidney epithelium	UBERON:0004819	91.54	silver quality
adult mammalian kidney	UBERON:0000082	85.86	gold quality
kidney	UBERON:0002113	81.16	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.06	gold quality
bone marrow cell	CL:0002092	77.02	gold quality
upper arm skin	UBERON:0004263	76.90	gold quality
esophagus mucosa	UBERON:0002469	76.43	gold quality
lower esophagus mucosa	UBERON:0035834	75.93	gold quality
cortex of kidney	UBERON:0001225	75.18	gold quality
adrenal tissue	UBERON:0018303	74.15	gold quality
sural nerve	UBERON:0015488	73.50	gold quality
buccal mucosa cell	CL:0002336	72.50	silver quality
esophagus	UBERON:0001043	72.01	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	71.84	gold quality
ventricular zone	UBERON:0003053	71.23	gold quality
right adrenal gland	UBERON:0001233	70.98	gold quality
skin of abdomen	UBERON:0001416	70.78	gold quality
right adrenal gland cortex	UBERON:0035827	70.78	gold quality
epithelial cell of pancreas	CL:0000083	70.72	gold quality
skin of leg	UBERON:0001511	70.49	gold quality
monocyte	CL:0000576	70.29	gold quality
leukocyte	CL:0000738	70.19	gold quality
calcaneal tendon	UBERON:0003701	70.08	gold quality
zone of skin	UBERON:0000014	69.97	gold quality
left adrenal gland	UBERON:0001234	69.73	gold quality
colonic epithelium	UBERON:0000397	69.56	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	69.47	silver quality
left adrenal gland cortex	UBERON:0035825	69.37	gold quality
spinal cord	UBERON:0002240	69.27	gold quality
granulocyte	CL:0000094	69.09	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	5.88

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.