AK6
gene geneOn this page
Also known as CINAP
Summary
AK6 (adenylate kinase 6, HGNC:49151) is a protein-coding gene on chromosome 5q13.2, encoding Adenylate kinase isoenzyme 6 (Q9Y3D8). Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates.
This gene encodes a protein that belongs to the adenylate kinase family of enzymes. The protein has a nuclear localization and contains Walker A (P-loop) and Walker B motifs and a metal-coordinating residue. The protein may be involved in regulation of Cajal body formation. In human, AK6 and TAF9 (GeneID: 6880) are two distinct genes that share 5’ exons. Alternative splicing results in multiple transcript variants.
Source: NCBI Gene 102157402 — RefSeq curated summary.
At a glance
- GWAS associations: 1
- Clinical variants (ClinVar): 36 total
- MANE Select transcript:
NM_016283
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:49151 |
| Approved symbol | AK6 |
| Name | adenylate kinase 6 |
| Location | 5q13.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | CINAP |
| Ensembl gene | ENSG00000085231 |
| Ensembl biotype | protein_coding |
| OMIM | 619357 |
| Entrez | 102157402 |
Gene structure
Transcript identifiers
Ensembl transcripts: 5 — 5 protein_coding
ENST00000380818, ENST00000380822, ENST00000502819, ENST00000512561, ENST00000618980
RefSeq mRNA: 2 — MANE Select: NM_016283
NM_001015891, NM_016283
CCDS: CCDS4001, CCDS43324
Canonical transcript exons
ENST00000380822 — 5 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001486410 | 69355649 | 69355794 |
| ENSE00001486415 | 69355895 | 69355953 |
| ENSE00001549839 | 69350984 | 69352253 |
| ENSE00002086906 | 69369463 | 69369520 |
| ENSE00003719110 | 69366503 | 69366595 |
Expression profiles
Bgee: expression breadth ubiquitous, 134 present calls, max score 96.15.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 5.1618 / max 107.6608, expressed in 1602 samples.
FANTOM5 promoters (5 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 62019 | 60.0109 | 1817 |
| 62022 | 3.7826 | 1344 |
| 62021 | 0.6954 | 402 |
| 62020 | 0.6838 | 414 |
| 62023 | 0.1776 | 54 |
Top tissues by expression
134 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| calcaneal tendon | UBERON:0003701 | 96.15 | gold quality |
| adrenal tissue | UBERON:0018303 | 95.89 | gold quality |
| left adrenal gland | UBERON:0001234 | 95.87 | gold quality |
| right adrenal gland | UBERON:0001233 | 95.80 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 95.80 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 95.79 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 95.72 | gold quality |
| endometrium | UBERON:0001295 | 95.65 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 95.61 | gold quality |
| ventricular zone | UBERON:0003053 | 95.58 | gold quality |
| gastrocnemius | UBERON:0001388 | 95.55 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 95.42 | gold quality |
| muscle of leg | UBERON:0001383 | 95.30 | gold quality |
| adrenal gland | UBERON:0002369 | 95.28 | gold quality |
| nucleus accumbens | UBERON:0001882 | 95.19 | gold quality |
| right testis | UBERON:0004534 | 95.18 | gold quality |
| caudate nucleus | UBERON:0001873 | 95.09 | gold quality |
| islet of Langerhans | UBERON:0000006 | 95.08 | gold quality |
| omental fat pad | UBERON:0010414 | 95.05 | gold quality |
| left testis | UBERON:0004533 | 94.93 | gold quality |
| testis | UBERON:0000473 | 94.89 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 94.83 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 94.76 | gold quality |
| tibial artery | UBERON:0007610 | 94.74 | gold quality |
| popliteal artery | UBERON:0002250 | 94.73 | gold quality |
| putamen | UBERON:0001874 | 94.68 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 94.58 | gold quality |
| left coronary artery | UBERON:0001626 | 94.50 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 94.50 | gold quality |
| body of pancreas | UBERON:0001150 | 94.49 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-CURD-112 | yes | 8.32 |
| E-ANND-3 | yes | 7.51 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
26 targeting AK6, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4531 | 99.99 | 69.70 | 3181 |
| HSA-MIR-27A-3P | 99.98 | 72.13 | 2955 |
| HSA-MIR-27B-3P | 99.98 | 72.13 | 2955 |
| HSA-MIR-9985 | 99.98 | 72.11 | 2939 |
| HSA-MIR-3065-5P | 99.97 | 71.56 | 3281 |
| HSA-MIR-3686 | 99.90 | 70.53 | 2432 |
| HSA-MIR-8062 | 99.88 | 68.43 | 995 |
| HSA-MIR-8084 | 99.73 | 69.57 | 1760 |
| HSA-MIR-4516 | 99.61 | 67.78 | 3390 |
| HSA-MIR-888-3P | 99.53 | 69.77 | 1057 |
| HSA-MIR-7159-3P | 99.51 | 70.17 | 1920 |
| HSA-MIR-20A-3P | 99.44 | 69.10 | 1575 |
| HSA-MIR-3160-5P | 99.28 | 69.07 | 1938 |
| HSA-MIR-664A-3P | 99.22 | 71.08 | 2696 |
| HSA-MIR-4528 | 99.18 | 69.77 | 1936 |
| HSA-MIR-6074 | 98.89 | 69.64 | 2187 |
| HSA-MIR-4477A | 98.83 | 69.75 | 2952 |
| HSA-MIR-4766-3P | 98.48 | 67.94 | 1347 |
| HSA-MIR-4772-3P | 98.04 | 65.60 | 1203 |
| HSA-MIR-6529-5P | 97.85 | 66.47 | 673 |
| HSA-MIR-144-5P | 97.66 | 69.90 | 531 |
| HSA-MIR-562 | 97.66 | 65.63 | 698 |
| HSA-MIR-6730-3P | 97.03 | 67.54 | 889 |
| HSA-MIR-152-5P | 96.42 | 66.59 | 960 |
| HSA-MIR-5586-3P | 95.51 | 67.00 | 805 |
| HSA-MIR-4765 | 93.11 | 66.17 | 737 |
Literature-anchored findings (GeneRIF, showing 8)
- purification and X ray crystal structure (PMID:15213396)
- hCINAP is a novel coilin-interacting protein encoded by a transcript from the transcription factor TAFIID32 locus (PMID:16079131)
- hCINAP determines self-renewal of colorectal cancer stem cells by facilitating LDHA phosphorylation. (PMID:28516914)
- These results provide mechanistic insight into the function of hCINAP during the DNA-damage response and its role in acute myelocytic leukemia resistance to therapy. (PMID:31444354)
- The mRNA and protein expressions of AK1, AK6 and AK7 are significantly down-regulated in the sperm of asthenospermia patients, which may be closely related with reduced sperm motility. (PMID:32251557)
- hCINAP is potentially a direct target gene of HIF-1 and is required for hypoxia-induced EMT and apoptosis in cervical cancer cells. (PMID:32830518)
- Human adenylate kinase 6 regulates WNK1 (with no lysine kinase-1) phosphorylation states and affects ion homeostasis in NT2 cells. (PMID:33744230)
- Unique structural features of the adenylate kinase hCINAP/AK6 and its multifaceted functions in carcinogenesis and tumor progression. (PMID:34245011)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | AK6 | ENSDARG00000035573 |
| rattus_norvegicus | Ak6 | ENSRNOG00000026813 |
| rattus_norvegicus | Ak6 | ENSRNOG00000063018 |
| drosophila_melanogaster | Ak6 | FBGN0033754 |
| caenorhabditis_elegans | WBGENE00008458 |
Protein
Protein identifiers
Adenylate kinase isoenzyme 6 — Q9Y3D8 (reviewed: Q9Y3D8)
Alternative names: Adrenal gland protein AD-004, Coilin-interacting nuclear ATPase protein, Dual activity adenylate kinase/ATPase
All UniProt accessions (5): Q9Y3D8, A0A087WVD7, A0A087WY94, A0AAU7BBC0, D6RDH4
UniProt curated annotations — full annotation on UniProt →
Function. Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Also has ATPase activity. Involved in the late cytoplasmic maturation steps of the 40S ribosomal particles, specifically 18S rRNA maturation. While NMP activity is not required for ribosome maturation, ATPase activity is. Associates transiently with small ribosomal subunit protein uS11. ATP hydrolysis breaks the interaction with uS11. May temporarily remove uS11 from the ribosome to enable a conformational change of the ribosomal RNA that is needed for the final maturation step of the small ribosomal subunit. Its NMP activity may have a role in nuclear energy homeostasis. AMP and dAMP are the preferred substrates, but CMP and dCMP are also good substrates. IMP is phosphorylated to a much lesser extent. All nucleoside triphosphates ATP, GTP, UTP, CTP, dATP, dCTP, dGTP, and TTP are accepted as phosphate donors. CTP is the best phosphate donor, followed by UTP, ATP, GTP and dCTP. May be involved in regulation of Cajal body (CB) formation.
Subunit / interactions. Monomer and homodimer. Interacts with small ribosomal subunit protein uS11. Not a structural component of 43S pre-ribosomes, but transiently interacts with them by binding to uS11. Interacts with COIL (via C-terminus).
Subcellular location. Cytoplasm. Nucleus. Nucleoplasm. Cajal body.
Tissue specificity. Expressed in heart, brain, placenta, lung, liver, skeletal muscle, kidney, pancreas, chorionic villi and the central nervous system.
Similarity. Belongs to the adenylate kinase family. AK6 subfamily.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q9Y3D8-1 | 1, AK6 | yes |
| Q9Y3D8-2 | 2 |
RefSeq proteins (2): NP_001015891, NP_057367* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR020618 | Adenyl_kinase_AK6 | Family |
| IPR027417 | P-loop_NTPase | Homologous_superfamily |
Pfam: PF13238
Enzyme classification (BRENDA):
- EC 2.7.4.3 — adenylate kinase (BRENDA: 73 organisms, 259 substrates, 134 inhibitors, 192 Km, 47 kcat entries)
Substrate kinetics (BRENDA)
9 substrates with measured Km, best-characterized 9. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| AMP | 0.0014–1.9 | 59 |
| ATP | 0.0001–7 | 58 |
| ADP | 0.003–16.8 | 27 |
| 2 ADP | 0.006–0.15 | 5 |
| DAMP | 0.507–2 | 2 |
| 2’-DAMP | 0.85 | 1 |
| 7-DEAZAADENOSINE 5’-MONOPHOSPHATE | 0.73 | 1 |
| ADP3- | 0.03 | 1 |
| CMP | 0.0002 | 1 |
Catalyzed reactions (Rhea), 2 shown:
- AMP + ATP = 2 ADP (RHEA:12973)
- ATP + H2O = ADP + phosphate + H(+) (RHEA:13065)
UniProt features (30 total): helix 9, binding site 7, strand 7, region of interest 3, chain 1, splice variant 1, mutagenesis site 1, turn 1
Structure
Experimental structures (PDB)
6 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 3IIJ | X-RAY DIFFRACTION | 1.76 |
| 3IIK | X-RAY DIFFRACTION | 1.95 |
| 1RKB | X-RAY DIFFRACTION | 2 |
| 3IIL | X-RAY DIFFRACTION | 2 |
| 3IIM | X-RAY DIFFRACTION | 2 |
| 5JZV | X-RAY DIFFRACTION | 2.07 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9Y3D8-F1 | 97.15 | 0.97 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (7): 148; 13; 15; 16; 17; 18; 109
Mutagenesis-validated functional residues (1):
| Position | Phenotype |
|---|---|
| 79 | induces homodimerization. reduces adenylate kinase activity by 72% and atpase activity by 76%. significantly changes caj |
Function
Pathways and Gene Ontology
Reactome pathways
3 pathways
| ID | Pathway |
|---|---|
| R-HSA-499943 | Interconversion of nucleotide di- and triphosphates |
| R-HSA-1430728 | Metabolism |
| R-HSA-15869 | Metabolism of nucleotides |
MSigDB gene sets: 92 (showing top):
GOBP_RIBOSOME_BIOGENESIS, RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP, GOBP_ORGANOPHOSPHATE_METABOLIC_PROCESS, GOBP_NUCLEOSIDE_PHOSPHATE_BIOSYNTHETIC_PROCESS, GOBP_ORGANOPHOSPHATE_BIOSYNTHETIC_PROCESS, GOBP_NUCLEOBASE_CONTAINING_SMALL_MOLECULE_METABOLIC_PROCESS, MILI_PSEUDOPODIA_HAPTOTAXIS_UP, GOBP_RIBOSOMAL_SMALL_SUBUNIT_BIOGENESIS, GOBP_NUCLEOBASE_CONTAINING_SMALL_MOLECULE_INTERCONVERSION, GOBP_NUCLEOSIDE_MONOPHOSPHATE_METABOLIC_PROCESS, GOBP_RIBONUCLEOPROTEIN_COMPLEX_BIOGENESIS, GOCC_NUCLEAR_SPECK, GOCC_CAJAL_BODY, GOCC_NUCLEAR_BODY, GOCC_RIBONUCLEOPROTEIN_GRANULE
GO Biological Process (5): rRNA processing (GO:0006364), nucleobase-containing small molecule interconversion (GO:0015949), ribosomal small subunit biogenesis (GO:0042274), ribosome biogenesis (GO:0042254), nucleoside monophosphate phosphorylation (GO:0046940)
GO Molecular Function (8): AMP kinase activity (GO:0004017), ATP binding (GO:0005524), ATP hydrolysis activity (GO:0016887), nucleoside monophosphate kinase activity (GO:0050145), nucleotide binding (GO:0000166), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740)
GO Cellular Component (7): nucleus (GO:0005634), nucleoplasm (GO:0005654), cytoplasm (GO:0005737), centrosome (GO:0005813), Cajal body (GO:0015030), membrane (GO:0016020), nuclear speck (GO:0016607)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Metabolism of nucleotides | 1 |
| Metabolism | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 3 |
| ribosome biogenesis | 2 |
| ribonucleoprotein complex biogenesis | 2 |
| nuclear ribonucleoprotein granule | 2 |
| RNA processing | 1 |
| rRNA metabolic process | 1 |
| nucleobase-containing small molecule metabolic process | 1 |
| nucleoside monophosphate metabolic process | 1 |
| nucleotide biosynthetic process | 1 |
| nucleoside monophosphate kinase activity | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| ribonucleoside triphosphate phosphatase activity | 1 |
| ATP-dependent activity | 1 |
| phosphotransferase activity, phosphate group as acceptor | 1 |
| nucleobase-containing compound kinase activity | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| binding | 1 |
| transferase activity, transferring phosphorus-containing groups | 1 |
| catalytic activity | 1 |
| intracellular membrane-bounded organelle | 1 |
| nuclear lumen | 1 |
| intracellular anatomical structure | 1 |
| centriole | 1 |
| microtubule organizing center | 1 |
Protein interactions and networks
STRING
1252 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| AK6 | COIL | P38432 | 661 |
| AK6 | NOB1 | Q9ULX3 | 607 |
| AK6 | SENP8 | Q96LD8 | 605 |
| AK6 | AK9 | Q5TCS8 | 593 |
| AK6 | RPS14 | P06366 | 565 |
| AK6 | AK5 | Q9Y6K8 | 528 |
| AK6 | RIOK2 | Q9BVS4 | 491 |
| AK6 | RIOK1 | Q9BRS2 | 475 |
| AK6 | AK8 | Q96MA6 | 470 |
| AK6 | AK1 | P00568 | 460 |
| AK6 | ENPP4 | Q9Y6X5 | 450 |
| AK6 | QTRT1 | Q9BXR0 | 447 |
| AK6 | AK2 | P54819 | 433 |
| AK6 | LTV1 | Q96GA3 | 404 |
| AK6 | AK7 | Q96M32 | 399 |
| AK6 | TSR1 | Q2NL82 | 399 |
IntAct
40 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| AK6 | RPS14 | psi-mi:“MI:0915”(physical association) | 0.740 |
| RPS14 | AK6 | psi-mi:“MI:0915”(physical association) | 0.740 |
| TADA1 | TAF5L | psi-mi:“MI:0914”(association) | 0.640 |
| RPS14 | CCZ1B | psi-mi:“MI:0914”(association) | 0.640 |
| COIL | AK6 | psi-mi:“MI:0915”(physical association) | 0.600 |
| AK6 | COIL | psi-mi:“MI:0403”(colocalization) | 0.600 |
| AK6 | COIL | psi-mi:“MI:0915”(physical association) | 0.600 |
| AK6 | NDRG1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| LAMTOR5 | AK6 | psi-mi:“MI:0915”(physical association) | 0.560 |
| AK6 | LAMTOR5 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TAF8 | TAF4 | psi-mi:“MI:0914”(association) | 0.530 |
| TADA2B | SUPT3H | psi-mi:“MI:0914”(association) | 0.530 |
| LPAR1 | TMEM223 | psi-mi:“MI:0914”(association) | 0.530 |
| TMEM63A | AP3D1 | psi-mi:“MI:0914”(association) | 0.530 |
| FBLN1 | AK6 | psi-mi:“MI:0915”(physical association) | 0.370 |
| AK6 | GALNT6 | psi-mi:“MI:0915”(physical association) | 0.370 |
| ZW10 | psi-mi:“MI:0914”(association) | 0.350 | |
| UNC93B1 | psi-mi:“MI:0914”(association) | 0.350 | |
| LRRK2 | psi-mi:“MI:0914”(association) | 0.350 | |
| ATXN7L3 | USP27X | psi-mi:“MI:0914”(association) | 0.350 |
| TAF7L | TAF4 | psi-mi:“MI:0914”(association) | 0.350 |
| MYCL | CASK | psi-mi:“MI:0914”(association) | 0.350 |
| TFEB | TFEC | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (30): AK6 (Affinity Capture-MS), AK6 (Affinity Capture-MS), AK6 (Affinity Capture-MS), AK6 (Affinity Capture-MS), AK6 (Affinity Capture-MS), AK6 (Affinity Capture-MS), AK6 (Synthetic Lethality), AK6 (Affinity Capture-MS), AK6 (Affinity Capture-MS), AK6 (Affinity Capture-MS), AK6 (Affinity Capture-MS), AK6 (Negative Genetic), AK6 (Affinity Capture-MS), AK6 (Affinity Capture-MS), AK6 (Proximity Label-MS)
ESM2 similar proteins: A1L1L6, A5PJA1, B9N1F9, B9SQI7, E0CSI1, O43929, O80526, O95045, P08760, P29411, Q05B63, Q28DS0, Q28I42, Q2HJF8, Q2QNG7, Q2QZ86, Q2R483, Q2YDI2, Q5BJZ6, Q5EB68, Q5M939, Q5R4J9, Q5R6Z7, Q5RDZ0, Q5ZID6, Q5ZKF6, Q5ZM73, Q6AY91, Q6N069, Q6NVC5, Q7SYN4, Q7Z4G4, Q80UM3, Q8GYA6, Q8IXI2, Q8JGT5, Q8RWF0, Q8VCP8, Q91W63, Q923S8
Diamond homologs: A4YIQ9, A5PJA1, A6VHC3, B0R4Q3, B6YUL3, C3MQV5, C3MWU3, C3N6L0, C3N6Z8, C3NGL3, C4KI81, C5A628, O27656, O28278, O58998, Q09527, Q12055, Q3IRT0, Q46FV0, Q58450, Q5EB68, Q5JG26, Q7JYV7, Q834S1, Q8PZ69, Q8TG40, Q8TJQ0, Q8TWH4, Q8U1S1, Q8VCP8, Q8ZU30, Q976L5, Q97ZW3, Q9FJI1, Q9HQS1, Q9TTU2, Q9UU88, Q9UZK4, Q9Y3D8, B0R683
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 43 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Chromatin organization | 7 | 16.8× | 2e-05 |
| HATs acetylate histones | 7 | 16.3× | 2e-05 |
| Chromatin modifying enzymes | 7 | 14.9× | 2e-05 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| regulation of DNA repair | 8 | 53.9× | 5e-10 |
| regulation of RNA splicing | 7 | 37.4× | 1e-07 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
36 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 30 |
| Likely benign | 0 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
0 predictions. Top by Δscore:
AlphaMissense
1134 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 5:69352186:C:G | A132P | 0.997 |
| 5:69355658:A:G | L106P | 0.997 |
| 5:69355748:A:T | V76D | 0.997 |
| 5:69366577:T:A | K16I | 0.997 |
| 5:69366578:T:G | K16Q | 0.997 |
| 5:69369463:C:G | G10R | 0.997 |
| 5:69355740:G:C | H79D | 0.996 |
| 5:69366574:G:A | T17I | 0.996 |
| 5:69355713:A:G | W88R | 0.995 |
| 5:69355713:A:T | W88R | 0.995 |
| 5:69369463:C:A | G10C | 0.995 |
| 5:69352212:T:A | E123V | 0.994 |
| 5:69355660:T:A | R105S | 0.994 |
| 5:69355660:T:G | R105S | 0.994 |
| 5:69366511:G:T | A38D | 0.994 |
| 5:69366565:C:T | G20D | 0.994 |
| 5:69366566:C:G | G20R | 0.994 |
| 5:69366576:T:A | K16N | 0.994 |
| 5:69366576:T:G | K16N | 0.994 |
| 5:69366586:C:T | G13E | 0.994 |
| 5:69366587:C:A | G13W | 0.994 |
| 5:69352185:G:T | A132D | 0.993 |
| 5:69355700:A:T | V92D | 0.993 |
| 5:69355738:A:C | H79Q | 0.993 |
| 5:69355738:A:T | H79Q | 0.993 |
| 5:69355746:C:G | D77H | 0.993 |
| 5:69366580:C:T | G15E | 0.993 |
| 5:69366595:C:A | G10V | 0.993 |
| 5:69366595:C:T | G10D | 0.993 |
| 5:69369471:A:G | L7P | 0.993 |
dbSNP variants (sampled 300 via entrez): RS1000028016 (5:69353901 C>T), RS1000101039 (5:69352446 C>G,T), RS1000138339 (5:69353298 C>T), RS1000489369 (5:69353565 G>C), RS1000544145 (5:69359222 C>T), RS1000620327 (5:69359542 GCC>G), RS1000750325 (5:69352621 C>T), RS1000831641 (5:69370747 G>T), RS1000973410 (5:69370684 T>G), RS1001053447 (5:69370924 T>C), RS1001206108 (5:69353979 C>T), RS1001289306 (5:69370536 C>T), RS1001530686 (5:69361396 C>G,T), RS1001573408 (5:69354164 T>C), RS1001867796 (5:69360257 T>C)
Disease associations
OMIM: gene MIM:619357 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
1 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST008058_305 | Estimated glomerular filtration rate | 4.000000e-11 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
8 total (human), top 8 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| aristolochic acid I | increases expression | 1 |
| sulforaphane | increases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| Doxorubicin | increases expression | 1 |
| Ivermectin | decreases expression | 1 |
| Tobacco Smoke Pollution | increases expression | 1 |
| Aflatoxin M1 | decreases expression | 1 |
| Acrylamide | increases expression | 1 |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.