AKAP13-AS1

Summary

AKAP13-AS1 (AKAP13 antisense RNA 1, HGNC:55975) is a long non-coding RNA gene on chromosome 15q25.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55975
Approved symbol	AKAP13-AS1
Name	AKAP13 antisense RNA 1
Location	15q25.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259367
Ensembl biotype	lncRNA
Entrez	123466214
RNAcentral	URS0000276885 — lncRNA, 660 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000558980

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000558980 — 2 exons

Exon	Start	End
ENSE00002541231	85619623	85620018
ENSE00002556229	85670685	85670948

Expression profiles

Bgee: expression breadth ubiquitous, 127 present calls, max score 95.57.

Top tissues by expression

127 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
calcaneal tendon	UBERON:0003701	95.57	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	91.70	gold quality
colonic epithelium	UBERON:0000397	85.66	gold quality
endometrium	UBERON:0001295	83.85	gold quality
adrenal tissue	UBERON:0018303	82.50	gold quality
sural nerve	UBERON:0015488	81.70	gold quality
smooth muscle tissue	UBERON:0001135	79.46	gold quality
body of uterus	UBERON:0009853	77.62	gold quality
gall bladder	UBERON:0002110	76.81	gold quality
myometrium	UBERON:0001296	76.55	gold quality
stromal cell of endometrium	CL:0002255	75.78	gold quality
cortical plate	UBERON:0005343	75.76	gold quality
bone marrow cell	CL:0002092	74.90	gold quality
skeletal muscle tissue	UBERON:0001134	73.62	gold quality
descending thoracic aorta	UBERON:0002345	72.56	gold quality
popliteal artery	UBERON:0002250	71.51	gold quality
tibial artery	UBERON:0007610	71.49	gold quality
thoracic aorta	UBERON:0001515	70.21	gold quality
urinary bladder	UBERON:0001255	70.14	gold quality
ascending aorta	UBERON:0001496	70.08	gold quality
uterine cervix	UBERON:0000002	69.88	gold quality
left coronary artery	UBERON:0001626	69.68	gold quality
tonsil	UBERON:0002372	68.84	gold quality
right lung	UBERON:0002167	68.71	gold quality
ganglionic eminence	UBERON:0004023	68.16	gold quality
left ovary	UBERON:0002119	67.97	gold quality
ovary	UBERON:0000992	67.93	gold quality
subcutaneous adipose tissue	UBERON:0002190	67.46	gold quality
mucosa of stomach	UBERON:0001199	67.42	gold quality
adipose tissue	UBERON:0001013	67.37	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	7.18

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.