ALDH1A2-AS1

Summary

ALDH1A2-AS1 (ALDH1A2 antisense RNA 1, HGNC:27515) is a long non-coding RNA gene on chromosome 15q21.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27515
Approved symbol	ALDH1A2-AS1
Name	ALDH1A2 antisense RNA 1
Location	15q21.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259285
Ensembl biotype	lncRNA
Entrez	283665
RNAcentral	URS0000BC458D — lncRNA, 2536 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000559684

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000559684 — 3 exons

Exon	Start	End
ENSE00002541596	58065225	58065742
ENSE00002556516	58070808	58071043
ENSE00002566360	58066815	58066934

Expression profiles

Bgee: expression breadth broad, 93 present calls, max score 74.52.

Top tissues by expression

93 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
tonsil	UBERON:0002372	74.52	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	73.21	gold quality
bone marrow cell	CL:0002092	72.20	gold quality
colonic epithelium	UBERON:0000397	69.40	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	67.99	gold quality
right uterine tube	UBERON:0001302	63.62	gold quality
calcaneal tendon	UBERON:0003701	57.59	gold quality
prefrontal cortex	UBERON:0000451	56.49	gold quality
bone marrow	UBERON:0002371	56.49	silver quality
hindlimb stylopod muscle	UBERON:0004252	56.13	gold quality
skeletal muscle tissue	UBERON:0001134	55.25	gold quality
small intestine	UBERON:0002108	54.58	gold quality
urinary bladder	UBERON:0001255	54.51	gold quality
myometrium	UBERON:0001296	54.38	gold quality
body of uterus	UBERON:0009853	53.76	gold quality
liver	UBERON:0002107	53.68	silver quality
fallopian tube	UBERON:0003889	53.51	gold quality
ectocervix	UBERON:0012249	52.09	gold quality
right atrium auricular region	UBERON:0006631	51.10	gold quality
right coronary artery	UBERON:0001625	51.07	gold quality
smooth muscle tissue	UBERON:0001135	50.19	gold quality
adrenal tissue	UBERON:0018303	49.96	gold quality
gall bladder	UBERON:0002110	49.90	gold quality
stomach	UBERON:0000945	49.77	silver quality
uterine cervix	UBERON:0000002	49.28	gold quality
heart	UBERON:0000948	48.89	gold quality
islet of Langerhans	UBERON:0000006	48.70	gold quality
adult mammalian kidney	UBERON:0000082	48.60	gold quality
kidney	UBERON:0002113	48.51	gold quality
right ovary	UBERON:0002118	48.35	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.80

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.