ALDH3A2
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Also known as FALDH
Summary
ALDH3A2 (aldehyde dehydrogenase 3 family member A2, HGNC:403) is a protein-coding gene on chromosome 17p11.2, encoding Aldehyde dehydrogenase family 3 member A2 (P51648). Catalyzes the oxidation of medium and long chain aliphatic aldehydes to fatty acids.
Aldehyde dehydrogenase isozymes are thought to play a major role in the detoxification of aldehydes generated by alcohol metabolism and lipid peroxidation. This gene product catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acid. Mutations in the gene cause Sjogren-Larsson syndrome. Alternatively spliced transcript variants encoding different isoforms have been found for this gene.
Source: NCBI Gene 224 — RefSeq curated summary.
At a glance
- Gene–disease (curated): Sjogren-Larsson syndrome (Definitive, GenCC)
- Clinical variants (ClinVar): 728 total — 82 pathogenic, 80 likely-pathogenic
- Phenotypes (HPO): 47
- Druggable target: yes
- Dosage sensitivity (ClinGen): haploinsufficiency autosomal recessive, triplosensitivity unscored
- MANE Select transcript:
NM_000382
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:403 |
| Approved symbol | ALDH3A2 |
| Name | aldehyde dehydrogenase 3 family member A2 |
| Location | 17p11.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FALDH |
| Ensembl gene | ENSG00000072210 |
| Ensembl biotype | protein_coding |
| OMIM | 609523 |
| Entrez | 224 |
Gene structure
Transcript identifiers
Ensembl transcripts: 54 — 34 protein_coding, 12 retained_intron, 5 nonsense_mediated_decay, 3 protein_coding_CDS_not_defined
ENST00000176643, ENST00000339618, ENST00000395575, ENST00000446398, ENST00000467473, ENST00000472059, ENST00000476965, ENST00000571163, ENST00000571537, ENST00000573505, ENST00000573565, ENST00000573947, ENST00000574078, ENST00000574597, ENST00000575384, ENST00000578614, ENST00000578696, ENST00000579403, ENST00000579855, ENST00000580550, ENST00000581518, ENST00000582991, ENST00000584332, ENST00000626500, ENST00000630662, ENST00000631291, ENST00000671841, ENST00000671878, ENST00000672059, ENST00000672322, ENST00000672357, ENST00000672465, ENST00000672487, ENST00000672564, ENST00000672567, ENST00000672591, ENST00000672608, ENST00000672709, ENST00000673064, ENST00000673136, ENST00000673472, ENST00000673516, ENST00000877753, ENST00000877754, ENST00000877755, ENST00000877756, ENST00000877757, ENST00000877758, ENST00000932536, ENST00000932537, ENST00000932538, ENST00000948946, ENST00000948947, ENST00000948948
RefSeq mRNA: 8 — MANE Select: NM_000382
NM_000382, NM_001031806, NM_001369136, NM_001369137, NM_001369138, NM_001369139, NM_001369146, NM_001369148
CCDS: CCDS11210, CCDS32589
Canonical transcript exons
ENST00000176643 — 10 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001186438 | 19648751 | 19649124 |
| ENSE00003478307 | 19675558 | 19677596 |
| ENSE00003480537 | 19651547 | 19651778 |
| ENSE00003508178 | 19656366 | 19656574 |
| ENSE00003575021 | 19657745 | 19657862 |
| ENSE00003610203 | 19671721 | 19671956 |
| ENSE00003616786 | 19664948 | 19665047 |
| ENSE00003623312 | 19661127 | 19661268 |
| ENSE00003631112 | 19663333 | 19663499 |
| ENSE00003640393 | 19652547 | 19652632 |
Expression profiles
Bgee: expression breadth ubiquitous, 298 present calls, max score 99.47.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 27.3892 / max 317.8015, expressed in 1743 samples.
FANTOM5 promoters (4 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 159852 | 21.0907 | 1739 |
| 159855 | 5.2742 | 1099 |
| 159853 | 0.5289 | 307 |
| 159854 | 0.4954 | 259 |
Top tissues by expression
299 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| adrenal tissue | UBERON:0018303 | 99.47 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 99.14 | gold quality |
| right adrenal gland | UBERON:0001233 | 99.11 | gold quality |
| left adrenal gland | UBERON:0001234 | 99.05 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 99.05 | gold quality |
| adrenal cortex | UBERON:0001235 | 99.04 | gold quality |
| upper leg skin | UBERON:0004262 | 98.89 | gold quality |
| adrenal gland | UBERON:0002369 | 98.87 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 98.72 | gold quality |
| skin of hip | UBERON:0001554 | 98.68 | gold quality |
| skin of abdomen | UBERON:0001416 | 98.62 | gold quality |
| hair follicle | UBERON:0002073 | 98.49 | gold quality |
| epithelium of esophagus | UBERON:0001976 | 98.40 | gold quality |
| tongue squamous epithelium | UBERON:0006919 | 98.31 | gold quality |
| nephron tubule | UBERON:0001231 | 98.26 | gold quality |
| zone of skin | UBERON:0000014 | 98.25 | gold quality |
| squamous epithelium | UBERON:0006914 | 98.23 | gold quality |
| nipple | UBERON:0002030 | 98.10 | gold quality |
| skin of leg | UBERON:0001511 | 98.06 | gold quality |
| upper arm skin | UBERON:0004263 | 98.05 | gold quality |
| esophagus mucosa | UBERON:0002469 | 97.94 | gold quality |
| gingival epithelium | UBERON:0001949 | 97.92 | gold quality |
| pharyngeal mucosa | UBERON:0000355 | 97.87 | gold quality |
| gingiva | UBERON:0001828 | 97.85 | gold quality |
| mouth mucosa | UBERON:0003729 | 97.64 | gold quality |
| mammalian vulva | UBERON:0000997 | 97.62 | gold quality |
| minor salivary gland | UBERON:0001830 | 97.58 | gold quality |
| liver | UBERON:0002107 | 97.51 | gold quality |
| right lobe of liver | UBERON:0001114 | 97.37 | gold quality |
| calcaneal tendon | UBERON:0003701 | 97.37 | gold quality |
Single-cell (SCXA)
Detected in 5 experiment(s), a significant marker in 4.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-81547 | yes | 1149.40 |
| E-CURD-114 | yes | 63.73 |
| E-MTAB-5061 | yes | 25.64 |
| E-GEOD-76312 | no | 78.28 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): CTNNB1, PPARA
miRNA regulators (miRDB)
76 targeting ALDH3A2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6873-3P | 100.00 | 71.42 | 2626 |
| HSA-MIR-4768-5P | 100.00 | 69.49 | 2861 |
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-4425 | 100.00 | 67.59 | 1049 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-511-3P | 99.99 | 68.85 | 1467 |
| HSA-MIR-186-5P | 99.99 | 70.83 | 3707 |
| HSA-MIR-3065-5P | 99.97 | 71.56 | 3281 |
| HSA-MIR-144-3P | 99.94 | 73.98 | 2698 |
| HSA-MIR-6768-5P | 99.92 | 67.36 | 1942 |
| HSA-MIR-454-3P | 99.91 | 74.01 | 1925 |
| HSA-MIR-1305 | 99.91 | 71.43 | 3443 |
| HSA-MIR-130A-3P | 99.90 | 73.31 | 1861 |
| HSA-MIR-130B-3P | 99.90 | 73.27 | 1850 |
| HSA-MIR-301A-3P | 99.90 | 73.15 | 1839 |
| HSA-MIR-301B-3P | 99.90 | 73.19 | 1836 |
| HSA-MIR-3666 | 99.90 | 73.24 | 1833 |
| HSA-MIR-4295 | 99.90 | 73.11 | 1838 |
| HSA-MIR-4671-3P | 99.88 | 72.46 | 1045 |
| HSA-MIR-659-3P | 99.85 | 70.69 | 1620 |
| HSA-MIR-448 | 99.79 | 72.37 | 2103 |
| HSA-MIR-4658 | 99.77 | 64.94 | 514 |
| HSA-MIR-6790-5P | 99.77 | 65.24 | 505 |
| HSA-MIR-3150A-3P | 99.76 | 64.44 | 1640 |
| HSA-MIR-6763-5P | 99.76 | 64.68 | 1767 |
| HSA-MIR-3617-5P | 99.75 | 69.41 | 1968 |
| HSA-MIR-641 | 99.75 | 69.35 | 1975 |
| HSA-MIR-3680-3P | 99.75 | 72.51 | 3095 |
| HSA-MIR-670-5P | 99.67 | 69.94 | 1565 |
| HSA-MIR-3175 | 99.65 | 66.30 | 2031 |
Functional genomics
ClinGen dosage: haploinsufficiency 30 (autosomal recessive), triplosensitivity Not yet evaluated (unscored). ClinGen Gene Dosage Map
Literature-anchored findings (GeneRIF, showing 33)
- Fibroblasts of patients affected by Sjogren Larsson syndrome were found to be deficient in microsomal fatty aldehyde dehydrogenase. (PMID:15110319)
- seven novel ALDH3A2 mutations and their associated haplotypes envolved in Sjogren-Larsson Syndrome were identified in 13 patients and one fetus. (PMID:15241804)
- REVIEW: mutation update of Sjogren-Larsson syndrome (PMID:15931689)
- We report novel compound heterozygous mutations in ALDH3A2 in a Japanese family with Sjogren-Larsson syndrome. (PMID:16794583)
- Minireview summarizes recent advances in the molecular genetics of fatty aldehyde dehydrogenase (FALDH) deficiency and the biochemical pathogenesis of Sjogren-Larsson syndrome. (PMID:16996289)
- FALDH variants are produced by alternative splicing and share an important role in protecting against oxidative stress in an organelle-specific manner. (PMID:17510064)
- These results add to understanding of the genetic basis of Sjogren-Larsson syndrome. (PMID:17902024)
- FALDH deficiency in keratinocytes from patients with Sjogren-Larsson syndrome causes accumulation and diversion of fatty alcohol into alternative biosynthetic pathways. (PMID:17971613)
- Mutational analysis identified compound heterozygous mutations in each allele of fatty aldehyde dehydrogenase gene, confirming Sjogren-Larsson syndrome. (PMID:17998529)
- A structural model of FALDH has been constructed, and catalytically important residues have been proposed to be involved in alcohol and aldehyde oxidation: Gln-120, Glu-207, Cys-241, Phe-333, Tyr-410 and His-411. (PMID:18035827)
- The present results suggest that ALDH3A2 is a gene responsible for Sjogren-Larsson syndrome in Asian populations. (PMID:20883264)
- SLS is caused by mutation in the ALDH3A2 gene, which encodes for FALDH, an enzyme that catalyzes the oxidation of medium- and long-chain aliphtic aldehydes. (PMID:21524986)
- We describe 2 Sjogren-Larsson syndrome patients whose disease is caused by large contiguous gene deletions of the ALDH3A2 locus on 17p11.2. (PMID:21684788)
- Five unrelated patients with typical Sjogren-Larsson syndrome all present mutations in the ALDH3A2 gene. (PMID:21872273)
- We studied three Turkish Sjogren-Larsson syndrome patients One patient was homozygous for a novel ALDH3A2 mutation in exon 5. The mutation involves the codon 228 (CGC) with the transversion G->A modifying the codon in CAC. (PMID:22397046)
- the Sjogren-Larsson syndrome-causative gene ALDH3A2 is responsible for conversion of the sphingosine 1-phosphate degradation product hexadecenal to hexadecenoic acid (PMID:22633490)
- variation in the neurologic phenotype of Sjogren-Larsson syndrome is not strictly determined by the ALDH3A2 mutation or a biochemical defect, but by unidentified epigenetic/environmental factors, gene modifiers, or other mechanisms. (PMID:23034980)
- A previously unreported novel ALDH3A2 mutation was identified, c.681-14T>G, in a Sjogren-Larsson syndrome patient (homozygote) and his asymptomatic parents (heterozygotes). (PMID:24377952)
- The gatekeeper helix domain is important for directing the substrate specificity of FALDH towards long-chain fatty aldehydes. (PMID:25047030)
- Sjogren-Larsson syndrome belongs to a new group of inborn-errors-of-metabolism with inherited defects in phospholipids, sphingolipids and fatty-acids biosynthesis. It is caused by ALDH3A2 gene mutations. (PMID:25532748)
- Sjogren-Larsson Syndrome patients with ALDH3A2 mutations exhibit retinal disease in retinal cell layers (PMID:25784589)
- In female infertility, ALDH3A2 expression levels were higher in patients greater than 40 years of age and in poor responders compared to oocyte donors. (PMID:26449735)
- Homozygous ALDH3A2 mutations exhibited an unusual neuro-regressive clinical course associated with seizures in Sjogren-Larsson syndrome patients, which may reflect the presence of unidentified genetic or environmental modifiers in this consanguineous population. (PMID:29183715)
- recruitment of the forkhead protein FOXH1 on open chromatin regions integrates the signals of Activin/Smad2 and Wnt/beta-catenin to activate the expression of the ME genes including HAS2 and ALDH3A2 Consistently, H3K27me3 decrease is enriched on open chromatin around regulatory regions (PMID:30282636)
- We have established a patient-centered database for pathogenic variants in the ALDH3A2 gene, which contains both, genotype information for individual patients as well as clinical data. (PMID:30372562)
- Phenotypic and mutational spectrum of thirty-five patients with Sjogren-Larsson syndrome: identification of eleven novel ALDH3A2 mutations and founder effects. (PMID:31273323)
- Study from seven unrelated Egyptian pedigrees with Sjogren-Larsson syndrome revealed a novel pathogenic variant in the ALDH3A2 gene including one novel stop codon mutation; c.991G>T (p.E331X) and suggested a founder effect. (PMID:31388754)
- Comprehensive in silico screening and molecular dynamics studies of missense mutations in Sjogren-Larsson syndrome associated with the ALDH3A2 gene. (PMID:32085885)
- Macular crystalline inclusions in Sjogren-Larsson syndrome are dynamic structures that undergo remodeling. (PMID:32506993)
- Sjogren-Larsson Syndrome: A case series of five members from an extended family with a novel mutation. (PMID:32930514)
- Identification of ALDH3A2 as a novel prognostic biomarker in gastric adenocarcinoma using integrated bioinformatics analysis. (PMID:33148208)
- Novel ALDH3A2 mutations in structural and functional domains of FALDH causing diverse clinical phenotypes in Sjogren-Larsson syndrome patients. (PMID:34082469)
- Inhibit ALDH3A2 reduce ovarian cancer cells survival via elevating ferroptosis sensitivity. (PMID:37247796)
Cross-species orthologs
8 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | aldh3a1 | ENSDARG00000074791 |
| mus_musculus | Aldh3a2 | ENSMUSG00000010025 |
| rattus_norvegicus | Aldh3a2 | ENSRNOG00000002342 |
| drosophila_melanogaster | CG8665 | FBGN0032945 |
| drosophila_melanogaster | CG31075 | FBGN0051075 |
| caenorhabditis_elegans | WBGENE00000107 | |
| caenorhabditis_elegans | WBGENE00000108 | |
| caenorhabditis_elegans | WBGENE00000109 |
Paralogs (17): ALDH3B1 (ENSG00000006534), ALDH3A1 (ENSG00000108602), ALDH2 (ENSG00000111275), ALDH5A1 (ENSG00000112294), ALDH8A1 (ENSG00000118514), ALDH6A1 (ENSG00000119711), ALDH1A2 (ENSG00000128918), ALDH3B2 (ENSG00000132746), ALDH1L2 (ENSG00000136010), ALDH1B1 (ENSG00000137124), ALDH9A1 (ENSG00000143149), ALDH1L1 (ENSG00000144908), ALDH4A1 (ENSG00000159423), ALDH16A1 (ENSG00000161618), ALDH7A1 (ENSG00000164904), ALDH1A1 (ENSG00000165092), ALDH1A3 (ENSG00000184254)
Protein
Protein identifiers
Aldehyde dehydrogenase family 3 member A2 — P51648 (reviewed: P51648)
Alternative names: Aldehyde dehydrogenase 10, Fatty aldehyde dehydrogenase, Microsomal aldehyde dehydrogenase
All UniProt accessions (20): P51648, A0A0D9SGC3, A0A5F9ZGX4, A0A5F9ZHI5, A0A5F9ZHN9, A0A5F9ZHP6, A0A5F9ZHZ9, A0A5F9ZI12, A0A5K1VW72, I3L0X1, I3L1M4, I3L2W1, I3L4G6, J3KTD9, J3KTG1, J3QKK9, J3QQV9, J3QRD1, J3QS00, K7EN73
UniProt curated annotations — full annotation on UniProt →
Function. Catalyzes the oxidation of medium and long chain aliphatic aldehydes to fatty acids. Active on a variety of saturated and unsaturated aliphatic aldehydes between 6 and 24 carbons in length. Responsible for conversion of the sphingosine 1-phosphate (S1P) degradation product hexadecenal to hexadecenoic acid.
Subunit / interactions. Homodimer.
Subcellular location. Microsome membrane. Endoplasmic reticulum membrane.
Tissue specificity. Detected in liver (at protein level).
Disease relevance. Sjoegren-Larsson syndrome (SLS) [MIM:270200] An autosomal recessive neurocutaneous disorder characterized by a combination of severe intellectual disability, spastic di- or tetraplegia and congenital ichthyosis. Ichthyosis is usually evident at birth with varying degrees of erythema and scaling, neurologic symptoms appear in the first or second year of life. Most patients have an IQ of less than 60. Additional clinical features include glistening white spots on the retina, seizures, short stature and speech defects. The disease is caused by variants affecting the gene represented in this entry.
Similarity. Belongs to the aldehyde dehydrogenase family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P51648-1 | 1 | yes |
| P51648-2 | 2 |
RefSeq proteins (8): NP_000373, NP_001026976, NP_001356065, NP_001356066, NP_001356067, NP_001356068, NP_001356075, NP_001356077 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR012394 | Aldehyde_DH_NAD(P) | Family |
| IPR015590 | Aldehyde_DH_dom | Domain |
| IPR016160 | Ald_DH_CS_CYS | Conserved_site |
| IPR016161 | Ald_DH/histidinol_DH | Homologous_superfamily |
| IPR016162 | Ald_DH_N | Homologous_superfamily |
| IPR016163 | Ald_DH_C | Homologous_superfamily |
| IPR029510 | Ald_DH_CS_GLU | Conserved_site |
Pfam: PF00171
Enzyme classification (BRENDA):
- EC 1.2.1.48 — long-chain-aldehyde dehydrogenase (BRENDA: 13 organisms, 85 substrates, 29 inhibitors, 32 Km, 8 kcat entries)
Substrate kinetics (BRENDA)
25 substrates with measured Km, best-characterized 15. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| NAD+ | 0.18–0.28 | 3 |
| DECANAL | 0.0038–0.023 | 2 |
| DODECANAL | 0.0136–0.019 | 2 |
| HEXADECANAL | 0.0083–0.032 | 2 |
| OCTADECANAL | 0.02–0.021 | 2 |
| TETRADECANAL | 0.0103–0.023 | 2 |
| (11Z)-HEXADEC-11-ENAL | 0.0343 | 1 |
| ACETALDEHYDE | 2.5 | 1 |
| ARACHIDIC ALDEHYDE | 0.038 | 1 |
| BEHENIC ALDEHYDE | 0.036 | 1 |
| BENZALDEHYDE | 1.44 | 1 |
| CIS,CIS-9,12-OCTADECADIENAL | 0.006 | 1 |
| CIS-9-HEXADECENAL | 0.012 | 1 |
| CIS-9-OCTADECENAL | 0.011 | 1 |
| CROTONALDEHYDE | 0.8 | 1 |
Catalyzed reactions (Rhea), 12 shown:
- an aldehyde + NAD(+) + H2O = a carboxylate + NADH + 2 H(+) (RHEA:16185)
- (2E,6E)-farnesal + NAD(+) + H2O = (2E,6E)-farnesoate + NADH + 2 H(+) (RHEA:24216)
- hexadecanoate + NADH + 2 H(+) = hexadecanal + NAD(+) + H2O (RHEA:33739)
- (2E)-hexadecenal + NAD(+) + H2O = (E)-hexadec-2-enoate + NADH + 2 H(+) (RHEA:36135)
- 22-oxodocosanoate + NAD(+) + H2O = docosanedioate + NADH + 2 H(+) (RHEA:39015)
- 2,6,10,14-tetramethylpentadecanal + NAD(+) + H2O = 2,6,10,14-tetramethylpentadecanoate + NADH + 2 H(+) (RHEA:44016)
- octadecanal + NAD(+) + H2O = octadecanoate + NADH + 2 H(+) (RHEA:44020)
- octanal + NAD(+) + H2O = octanoate + NADH + 2 H(+) (RHEA:44100)
- decanal + NAD(+) + H2O = decanoate + NADH + 2 H(+) (RHEA:44104)
- heptanal + NAD(+) + H2O = heptanoate + NADH + 2 H(+) (RHEA:44108)
- dodecanoate + NADH + 2 H(+) = dodecanal + NAD(+) + H2O (RHEA:44168)
- tetradecanal + NAD(+) + H2O = tetradecanoate + NADH + 2 H(+) (RHEA:44172)
UniProt features (86 total): sequence variant 27, helix 23, strand 17, mutagenesis site 6, turn 5, active site 2, chain 1, topological domain 1, transmembrane region 1, binding site 1, modified residue 1, splice variant 1
Structure
Experimental structures (PDB)
1 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 4QGK | X-RAY DIFFRACTION | 2.1 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P51648-F1 | 96.53 | 0.93 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (2): 207; 241
Ligand- & substrate-binding residues (1): 185–190
Post-translational modifications (1): 293
Mutagenesis-validated functional residues (6):
| Position | Phenotype |
|---|---|
| 112 | loss of enzyme activity. |
| 207 | loss of enzyme activity. |
| 241 | loss of enzyme activity. |
| 331 | loss of enzyme activity. |
| 410 | decreased enzyme activity with dodecanal and hexadecanal. no effect on enzyme activity with octanal. |
| 445–485 | decreased enzyme activity with dodecanal. strongly decreased enzyme activity with hexadecanal. no effect on enzyme activ |
Function
Pathways and Gene Ontology
Reactome pathways
10 pathways
| ID | Pathway |
|---|---|
| R-HSA-9696270 | RND2 GTPase cycle |
| R-HSA-9696273 | RND1 GTPase cycle |
| R-HSA-389599 | Alpha-oxidation of phytanate |
| R-HSA-9603798 | Class I peroxisomal membrane protein import |
| R-HSA-9609523 | Insertion of tail-anchored proteins into the endoplasmic reticulum membrane |
| R-HSA-9845614 | Sphingolipid catabolism |
| R-HSA-162582 | Signal Transduction |
| R-HSA-194315 | Signaling by Rho GTPases |
| R-HSA-9012999 | RHO GTPase cycle |
| R-HSA-9716542 | Signaling by Rho GTPases, Miro GTPases and RHOBTB3 |
MSigDB gene sets: 382 (showing top):
MODULE_93, IVANOVA_HEMATOPOIESIS_LATE_PROGENITOR, KEGG_GLYCOLYSIS_GLUCONEOGENESIS, GOBP_MONOCARBOXYLIC_ACID_METABOLIC_PROCESS, KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION, TANG_SENESCENCE_TP53_TARGETS_UP, MAHAJAN_RESPONSE_TO_IL1A_DN, SMITH_TERT_TARGETS_DN, CAIRO_HEPATOBLASTOMA_CLASSES_DN, KEGG_HISTIDINE_METABOLISM, ROSS_LEUKEMIA_WITH_MLL_FUSIONS, HOSHIDA_LIVER_CANCER_SUBCLASS_S3, BLALOCK_ALZHEIMERS_DISEASE_UP, KEGG_LYSINE_DEGRADATION, GOBP_EPIDERMIS_DEVELOPMENT
GO Biological Process (9): aldehyde metabolic process (GO:0006081), fatty acid metabolic process (GO:0006631), sesquiterpenoid metabolic process (GO:0006714), central nervous system development (GO:0007417), peripheral nervous system development (GO:0007422), epidermis development (GO:0008544), phytol metabolic process (GO:0033306), hexadecanal metabolic process (GO:0046458), lipid metabolic process (GO:0006629)
GO Molecular Function (11): 3-chloroallyl aldehyde dehydrogenase activity (GO:0004028), aldehyde dehydrogenase (NAD+) activity (GO:0004029), protein homodimerization activity (GO:0042803), long-chain-alcohol oxidase activity (GO:0046577), long-chain fatty aldehyde dehydrogenase (NAD+) activity (GO:0050061), medium-chain fatty aldehyde dehydrogenase (NAD+) activity (GO:0052814), farnesal dehydrogenase (NAD+) activity (GO:0120553), protein binding (GO:0005515), oxidoreductase activity (GO:0016491), oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (GO:0016620), fatty aldehyde dehydrogenase (NAD+) activity (GO:0102673)
GO Cellular Component (8): cytoplasm (GO:0005737), peroxisome (GO:0005777), peroxisomal membrane (GO:0005778), endoplasmic reticulum membrane (GO:0005789), cytosol (GO:0005829), intracellular membrane-bounded organelle (GO:0043231), endoplasmic reticulum (GO:0005783), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-7 pathways:
| Category | Pathways |
|---|---|
| RHO GTPase cycle | 2 |
| Protein localization | 2 |
| Peroxisomal lipid metabolism | 1 |
| Sphingolipid metabolism | 1 |
| Signaling by Rho GTPases, Miro GTPases and RHOBTB3 | 1 |
| Signaling by Rho GTPases | 1 |
| Signal Transduction | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 3 |
| nervous system development | 2 |
| system development | 2 |
| fatty aldehyde dehydrogenase (NAD+) activity | 2 |
| aldehyde dehydrogenase (NAD+) activity | 2 |
| intracellular anatomical structure | 2 |
| cytoplasm | 2 |
| metabolic process | 1 |
| lipid metabolic process | 1 |
| monocarboxylic acid metabolic process | 1 |
| terpenoid metabolic process | 1 |
| tissue development | 1 |
| diterpenoid metabolic process | 1 |
| primary alcohol metabolic process | 1 |
| fatty alcohol metabolic process | 1 |
| aldehyde metabolic process | 1 |
| primary metabolic process | 1 |
| oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 1 |
| aldehyde dehydrogenase [NAD(P)+] activity | 1 |
| identical protein binding | 1 |
| protein dimerization activity | 1 |
| oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | 1 |
| binding | 1 |
| catalytic activity | 1 |
| oxidoreductase activity, acting on the aldehyde or oxo group of donors | 1 |
| microbody | 1 |
| peroxisome | 1 |
| microbody membrane | 1 |
| organelle membrane | 1 |
| nuclear outer membrane-endoplasmic reticulum membrane network | 1 |
| endoplasmic reticulum subcompartment | 1 |
| membrane-bounded organelle | 1 |
| intracellular organelle | 1 |
| endomembrane system | 1 |
| intracellular membrane-bounded organelle | 1 |
Protein interactions and networks
STRING
4108 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ALDH3A2 | AGMO | Q6ZNB7 | 949 |
| ALDH3A2 | FA2H | Q7L5A8 | 777 |
| ALDH3A2 | ADH4 | P08319 | 616 |
| ALDH3A2 | ALDH18A1 | P54886 | 607 |
| ALDH3A2 | ADH6 | P28332 | 576 |
| ALDH3A2 | FAR1 | Q8WVX9 | 572 |
| ALDH3A2 | ALDH16A1 | Q8IZ83 | 556 |
| ALDH3A2 | ADH7 | P40394 | 554 |
| ALDH3A2 | ACSL1 | P33121 | 547 |
| ALDH3A2 | ECI2 | O75521 | 540 |
| ALDH3A2 | AKR1B1 | P15121 | 532 |
| ALDH3A2 | ADH5 | P11766 | 523 |
| ALDH3A2 | AKR1A1 | P14550 | 511 |
| ALDH3A2 | HSD17B4 | P51659 | 508 |
| ALDH3A2 | EHHADH | Q08426 | 504 |
IntAct
222 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CFTR | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.710 |
| IFT27 | IFT56 | psi-mi:“MI:0914”(association) | 0.690 |
| SPTLC1 | SPTLC2 | psi-mi:“MI:0914”(association) | 0.680 |
| SPTLC2 | SPTLC1 | psi-mi:“MI:0914”(association) | 0.680 |
| CDS1 | CDS2 | psi-mi:“MI:0914”(association) | 0.670 |
| ALDH3A1 | RCCD1 | psi-mi:“MI:0914”(association) | 0.640 |
| RELA | NFKBIE | psi-mi:“MI:0914”(association) | 0.620 |
| IGF1R | PIK3R2 | psi-mi:“MI:2364”(proximity) | 0.590 |
| INSR | PIK3R2 | psi-mi:“MI:2364”(proximity) | 0.570 |
| KPNB1 | POM121C | psi-mi:“MI:0914”(association) | 0.530 |
| YWHAZ | BLTP3B | psi-mi:“MI:0914”(association) | 0.530 |
| SLC9A6 | MAP1LC3B2 | psi-mi:“MI:0914”(association) | 0.530 |
| ALDH3A1 | IGLL5 | psi-mi:“MI:0914”(association) | 0.530 |
| HEATR1 | DUSP14 | psi-mi:“MI:0914”(association) | 0.530 |
| ARMC6 | SLC27A2 | psi-mi:“MI:0914”(association) | 0.530 |
| SLC9A6 | ALDH3A2 | psi-mi:“MI:0914”(association) | 0.530 |
| SLC9A6 | IFNGR1 | psi-mi:“MI:0914”(association) | 0.530 |
| HSPA8 | ARHGEF10 | psi-mi:“MI:2364”(proximity) | 0.480 |
| NRAS | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.480 |
| TPTE | NOP56 | psi-mi:“MI:2364”(proximity) | 0.420 |
| Stag2 | PPP1R12A | psi-mi:“MI:0915”(physical association) | 0.400 |
| Tubg1 | BDP1 | psi-mi:“MI:0914”(association) | 0.350 |
| Tnpo1 | CCHCR1 | psi-mi:“MI:0914”(association) | 0.350 |
| Prkci | LLGL2 | psi-mi:“MI:0914”(association) | 0.350 |
| Atp7a | RTL8C | psi-mi:“MI:0914”(association) | 0.350 |
| Smn1 | CLNS1A | psi-mi:“MI:0914”(association) | 0.350 |
| ATL3 | SNX14 | psi-mi:“MI:0914”(association) | 0.350 |
| CAPZA2 | PLEKHG3 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (443): ALDH3A2 (Affinity Capture-MS), ALDH3A2 (Affinity Capture-MS), CAND2 (Affinity Capture-MS), DDX20 (Affinity Capture-MS), TBC1D9B (Affinity Capture-MS), TBC1D15 (Affinity Capture-MS), FANCD2 (Affinity Capture-MS), SAAL1 (Affinity Capture-MS), KIAA1524 (Affinity Capture-MS), HEATR1 (Affinity Capture-MS), GEMIN4 (Affinity Capture-MS), INTS12 (Affinity Capture-MS), XPO4 (Affinity Capture-MS), TSC2 (Affinity Capture-MS), ATR (Affinity Capture-MS)
ESM2 similar proteins: A1VTR9, A3RF36, A4G8E9, A5G906, A6VZ85, A9LYY9, B5EEI4, B5FJX5, B5R4S6, B5R5R9, B8FUB6, B9M0D6, C0QLF1, C6BSC1, C6E7L9, E9Q3E1, J3QMK6, O14293, O93344, O94788, P11883, P12693, P30838, P30839, P30907, P39616, P42269, P46329, P47739, P47740, P51648, P54115, P81178, Q02XW0, Q24XR6, Q2YBP9, Q311G6, Q54DG1, Q5RF60, Q5XI42
Diamond homologs: A0A7W3RCJ3, A3M365, A3RF36, A4JJG5, A4XPI6, A7FKL5, A9AN00, B0RNV0, B0V944, B0VST2, B2FQ90, B2HV80, B4SHW0, B7GYG4, B7I896, C6KEM4, C7A2A0, D5E1S7, E9Q3E1, F6IBC7, J3QMK6, O04895, O05619, O24174, O59808, O74187, O86447, P08157, P0DPF0, P11883, P12693, P17202, P25553, P30838, P30839, P30840, P30907, P32872, P39616, P40108
SIGNOR signaling
2 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| FBXL12 | “down-regulates quantity by destabilization” | ALDH3A2 | binding |
| “Cullin 1-RBX1-Skp1” | “down-regulates quantity by destabilization” | ALDH3A2 | polyubiquitination |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 238 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Signaling by ERBB2 ECD mutants | 5 | 21.8× | 2e-04 |
| GRB2 events in ERBB2 signaling | 5 | 20.6× | 2e-04 |
| SHC1 events in ERBB2 signaling | 6 | 18.5× | 9e-05 |
| Signaling by ERBB2 TMD/JMD mutants | 6 | 18.5× | 9e-05 |
| CD209 (DC-SIGN) signaling | 5 | 16.9× | 4e-04 |
| Signaling by ERBB2 KD Mutants | 6 | 16.5× | 2e-04 |
| Downstream signal transduction | 6 | 14.8× | 2e-04 |
| DAP12 signaling | 5 | 12.0× | 2e-03 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| peptidyl-tyrosine phosphorylation | 7 | 14.5× | 1e-04 |
| autophagosome maturation | 8 | 13.8× | 4e-05 |
| cell surface receptor protein tyrosine kinase signaling pathway | 14 | 12.0× | 2e-08 |
| autophagosome assembly | 8 | 8.8× | 7e-04 |
| protein autophosphorylation | 11 | 7.9× | 5e-05 |
| positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction | 17 | 6.6× | 8e-07 |
| positive regulation of MAPK cascade | 12 | 4.8× | 2e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
728 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 82 |
| Likely pathogenic | 80 |
| Uncertain significance | 172 |
| Likely benign | 289 |
| Benign | 32 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1068678 | NM_000382.3(ALDH3A2):c.538del (p.His180fs) | Pathogenic |
| 1068916 | NM_000382.3(ALDH3A2):c.286_296del (p.Tyr96fs) | Pathogenic |
| 1069337 | NC_000017.10:g.(?19552275)(19555955_?)del | Pathogenic |
| 1069338 | NC_000017.10:g.(?19552275)(19561185_?)del | Pathogenic |
| 1072502 | NM_000382.3(ALDH3A2):c.1264C>T (p.Gln422Ter) | Pathogenic |
| 1174486 | NM_000382.3(ALDH3A2):c.1003C>T (p.Pro335Ser) | Pathogenic |
| 1322990 | NM_000382.3(ALDH3A2):c.1187_1188del (p.Ser396fs) | Pathogenic |
| 1322996 | NM_000382.3(ALDH3A2):c.639_640del (p.Cys214fs) | Pathogenic |
| 1370055 | NM_000382.3(ALDH3A2):c.28_29dup (p.Gln10fs) | Pathogenic |
| 1371896 | NC_000017.10:g.(?19564430)(19566822_?)del | Pathogenic |
| 1401504 | NM_000382.3(ALDH3A2):c.1108_1111del (p.Leu370fs) | Pathogenic |
| 1407166 | NM_000382.3(ALDH3A2):c.1087_1090del (p.Val363fs) | Pathogenic |
| 1460470 | NM_000382.3(ALDH3A2):c.805del (p.Tyr269fs) | Pathogenic |
| 1636 | NM_000382.3(ALDH3A2):c.521del (p.Leu174fs) | Pathogenic |
| 1637 | NM_000382.3(ALDH3A2):c.809del (p.Gly270fs) | Pathogenic |
| 1639 | NM_000382.3(ALDH3A2):c.641G>A (p.Cys214Tyr) | Pathogenic |
| 1641 | NM_000382.3(ALDH3A2):c.1297_1298del (p.Glu433fs) | Pathogenic |
| 1642 | NM_000382.3(ALDH3A2):c.1307_1311dup (p.Leu438fs) | Pathogenic |
| 1644 | NM_000382.3(ALDH3A2):c.1157A>G (p.Asn386Ser) | Pathogenic |
| 1685517 | NM_000382.3(ALDH3A2):c.608del (p.Pro203fs) | Pathogenic |
| 188768 | NM_000382.3(ALDH3A2):c.551C>T (p.Thr184Met) | Pathogenic |
| 189079 | NM_000382.3(ALDH3A2):c.798+5G>A | Pathogenic |
| 189163 | NM_000382.3(ALDH3A2):c.471+1del | Pathogenic |
| 189187 | NM_000382.3(ALDH3A2):c.901_903delinsCC (p.Ala301fs) | Pathogenic |
| 1936485 | NM_000382.3(ALDH3A2):c.985C>T (p.Gln329Ter) | Pathogenic |
| 1997162 | NM_000382.3(ALDH3A2):c.1176del (p.Phe392fs) | Pathogenic |
| 2102212 | NM_000382.3(ALDH3A2):c.292C>T (p.Gln98Ter) | Pathogenic |
| 2103941 | NM_000382.3(ALDH3A2):c.715del (p.Gln239fs) | Pathogenic |
| 2151163 | NM_000382.3(ALDH3A2):c.1384dup (p.Glu462fs) | Pathogenic |
| 2416519 | NM_000382.3(ALDH3A2):c.1303_1314delinsAGTTGGG (p.Ala435fs) | Pathogenic |
SpliceAI
2205 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 17:19649120:GCAAG:G | donor_gain | 1.0000 |
| 17:19649121:CAAGG:C | donor_loss | 1.0000 |
| 17:19649123:AG:A | donor_gain | 1.0000 |
| 17:19649124:GG:G | donor_gain | 1.0000 |
| 17:19649124:GGTA:G | donor_loss | 1.0000 |
| 17:19649125:G:GG | donor_gain | 1.0000 |
| 17:19649125:GT:G | donor_loss | 1.0000 |
| 17:19652546:GGAA:G | acceptor_gain | 1.0000 |
| 17:19652630:CAGG:C | donor_loss | 1.0000 |
| 17:19652633:G:GA | donor_loss | 1.0000 |
| 17:19652634:T:A | donor_loss | 1.0000 |
| 17:19661125:A:AG | acceptor_gain | 1.0000 |
| 17:19661125:AG:A | acceptor_gain | 1.0000 |
| 17:19661126:G:GG | acceptor_gain | 1.0000 |
| 17:19661126:GG:G | acceptor_gain | 1.0000 |
| 17:19661126:GGA:G | acceptor_gain | 1.0000 |
| 17:19661198:GATAC:G | donor_gain | 1.0000 |
| 17:19661264:CATAG:C | donor_loss | 1.0000 |
| 17:19661265:ATAGG:A | donor_loss | 1.0000 |
| 17:19661266:TAGG:T | donor_loss | 1.0000 |
| 17:19661270:T:A | donor_loss | 1.0000 |
| 17:19663331:A:AG | acceptor_gain | 1.0000 |
| 17:19663332:G:GG | acceptor_gain | 1.0000 |
| 17:19663332:GC:G | acceptor_gain | 1.0000 |
| 17:19663332:GCC:G | acceptor_gain | 1.0000 |
| 17:19663332:GCCC:G | acceptor_gain | 1.0000 |
| 17:19663332:GCCCC:G | acceptor_gain | 1.0000 |
| 17:19663496:TAAGG:T | donor_loss | 1.0000 |
| 17:19663498:AGGT:A | donor_loss | 1.0000 |
| 17:19663499:GGTAA:G | donor_loss | 1.0000 |
AlphaMissense
3184 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 17:19663389:T:C | F333L | 0.996 |
| 17:19663391:T:A | F333L | 0.996 |
| 17:19663391:T:G | F333L | 0.996 |
| 17:19663482:T:C | F364L | 0.995 |
| 17:19663484:T:A | F364L | 0.995 |
| 17:19663484:T:G | F364L | 0.995 |
| 17:19656484:C:A | A197D | 0.994 |
| 17:19657747:G:C | R228P | 0.994 |
| 17:19664978:A:C | S380R | 0.994 |
| 17:19664980:T:A | S380R | 0.994 |
| 17:19664980:T:G | S380R | 0.994 |
| 17:19671729:G:T | G406W | 0.994 |
| 17:19671730:G:A | G406E | 0.994 |
| 17:19651729:T:A | N112K | 0.993 |
| 17:19651729:T:G | N112K | 0.993 |
| 17:19656472:T:A | V193D | 0.993 |
| 17:19656511:T:C | L206P | 0.993 |
| 17:19656515:A:C | E207D | 0.993 |
| 17:19656515:A:T | E207D | 0.993 |
| 17:19656528:A:C | S212R | 0.993 |
| 17:19656530:T:A | S212R | 0.993 |
| 17:19656530:T:G | S212R | 0.993 |
| 17:19656536:T:G | C214W | 0.993 |
| 17:19663402:T:C | L337P | 0.993 |
| 17:19651724:T:A | W111R | 0.991 |
| 17:19651724:T:C | W111R | 0.991 |
| 17:19652566:G:C | K135N | 0.991 |
| 17:19652566:G:T | K135N | 0.991 |
| 17:19656517:T:C | L208P | 0.991 |
| 17:19657777:G:T | G238V | 0.991 |
dbSNP variants (sampled 300 via entrez): RS1000283688 (17:19652238 C>T), RS1000307602 (17:19663244 T>A,C,G), RS1000414888 (17:19675325 C>A,T), RS1000515571 (17:19646266 G>A,T), RS1000615792 (17:19670567 T>C), RS1000685296 (17:19669218 G>A), RS1000786422 (17:19656073 T>A), RS1000872933 (17:19676396 G>A), RS1000893263 (17:19657044 A>G), RS1000925475 (17:19676213 A>G), RS1001042432 (17:19670744 G>A), RS1001420558 (17:19663044 T>C), RS1001421230 (17:19677357 G>A), RS1001653687 (17:19670121 G>A), RS1001740936 (17:19669451 A>G)
Disease associations
OMIM: gene MIM:609523 | disease phenotypes: MIM:270200
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| Sjogren-Larsson syndrome | Definitive | Autosomal recessive |
Mondo (2): Sjogren-Larsson syndrome (MONDO:0010031), cerebral palsy (MONDO:0006497)
Orphanet (1): Sjögren-Larsson syndrome (Orphanet:816)
HPO phenotypes
47 total (30 of 47 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000252 | Microcephaly |
| HP:0000483 | Astigmatism |
| HP:0000488 | Retinopathy |
| HP:0000545 | Myopia |
| HP:0000551 | Color vision defect |
| HP:0000608 | Macular degeneration |
| HP:0000613 | Photophobia |
| HP:0000682 | Abnormal dental enamel morphology |
| HP:0000958 | Dry skin |
| HP:0000962 | Hyperkeratosis |
| HP:0001025 | Urticaria |
| HP:0001249 | Intellectual disability |
| HP:0001250 | Seizure |
| HP:0001252 | Hypotonia |
| HP:0001257 | Spasticity |
| HP:0001260 | Dysarthria |
| HP:0001264 | Spastic diplegia |
| HP:0001371 | Flexion contracture |
| HP:0001387 | Joint stiffness |
| HP:0001595 | Abnormal hair morphology |
| HP:0001597 | Abnormal nail morphology |
| HP:0002167 | Abnormal speech pattern |
| HP:0002313 | Spastic paraparesis |
| HP:0002650 | Scoliosis |
| HP:0002652 | Skeletal dysplasia |
| HP:0002808 | Kyphosis |
| HP:0002942 | Thoracic kyphosis |
| HP:0003577 | Congenital onset |
| HP:0004322 | Short stature |
GWAS associations
0 associations (top):
MeSH disease descriptors (2)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D002547 | Cerebral Palsy | C10.228.140.140.254 |
| D016111 | Sjogren-Larsson Syndrome | C16.131.831.512.723; C16.320.565.398.641.723; C16.320.850.820; C16.614.492.723; C17.800.428.333.723; C17.800.804.512.723; C17.800.827.820; C18.452.584.563.641.723; C18.452.648.398.641.723 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL4295779 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs4621031 | ALDH3A2 | 0.00 | 0 |
CTD chemical–gene interactions
89 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Tetrachlorodibenzodioxin | affects cotreatment, increases expression | 5 |
| sodium arsenite | increases abundance, increases expression, affects cotreatment, decreases expression | 4 |
| Cyclosporine | decreases expression | 4 |
| trichostatin A | affects cotreatment, decreases expression | 3 |
| Acetaminophen | decreases expression | 3 |
| Benzo(a)pyrene | increases expression, increases methylation, decreases expression | 3 |
| bisphenol A | decreases expression, increases expression | 2 |
| lead acetate | increases expression, affects cotreatment, decreases expression | 2 |
| methacrylaldehyde | decreases expression, increases abundance, affects cotreatment, affects expression, affects oxidation | 2 |
| Arsenic Trioxide | decreases response to substance, increases expression | 2 |
| Acrolein | affects cotreatment, affects expression, affects oxidation, decreases expression, increases abundance | 2 |
| Cadmium | increases abundance, increases expression | 2 |
| Ozone | affects oxidation, decreases expression, increases abundance, affects cotreatment, affects expression | 2 |
| Cadmium Chloride | increases abundance, increases expression | 2 |
| Particulate Matter | affects cotreatment, increases abundance, increases expression, decreases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| GSK-J4 | decreases expression | 1 |
| bisphenol F | increases expression | 1 |
| dicrotophos | decreases expression | 1 |
| hydroxyethyl methacrylate | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| alpha-pinene | affects cotreatment, affects expression, affects oxidation, increases abundance | 1 |
| sodium arsenate | decreases expression | 1 |
| pyrogallol 1,3-dimethyl ether | affects cotreatment, affects localization, increases expression | 1 |
| beta-lapachone | decreases expression | 1 |
| arsenite | increases abundance, increases expression | 1 |
| sulforaphane | increases expression | 1 |
| cobaltous chloride | decreases expression | 1 |
| tanshinone | decreases expression | 1 |
| ochratoxin A | decreases expression | 1 |
ChEMBL screening assays
3 unique, capped per target: 3 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4118581 | Binding | Binding affinity to ALDH3A2 in human NCI-H23 cells at 1 uM by mass spectrometry based pull down assay | Studies of TAK1-centered polypharmacology with novel covalent TAK1 inhibitors. — Bioorg Med Chem |
Cellosaurus cell lines
6 cell lines: 3 cancer cell line, 3 finite cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B1JF | Abcam HeLa ALDH3A2 KO | Cancer cell line | Female |
| CVCL_HQ03 | GM10640 | Finite cell line | Female |
| CVCL_HQ04 | GM10642 | Finite cell line | Male |
| CVCL_N151 | GM10641 | Finite cell line | Female |
| CVCL_SC22 | HAP1 ALDH3A2 (-) 1 | Cancer cell line | Male |
| CVCL_XL25 | HAP1 ALDH3A2 (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00154830 | PHASE4 | COMPLETED | Alterations of Functional Activities and Leg Stiffness After Hamstring Lengthening in Cerebral Palsy Children |
| NCT00432055 | PHASE4 | COMPLETED | Effects of Botulinum Toxin Type A in Adults With Cerebral Palsy |
| NCT00549471 | PHASE4 | TERMINATED | Improvement After Botulinum Toxin Injections to the Arms in Children With Cerebral Palsy |
| NCT00752934 | PHASE4 | TERMINATED | Does Oral Baclofen Improve Care and Comfort in Spastic Children in Nursing Homes? |
| NCT00964639 | PHASE4 | COMPLETED | Postoperative Pain in Children With Cerebral Palsy After Pelvic and Femoral Osteotomies |
| NCT01386255 | PHASE4 | WITHDRAWN | Placebo Controlled Study of Baclofen for GERD in Children With Cerebral Palsy |
| NCT02546999 | PHASE4 | COMPLETED | Does Botulinum Toxin A Make Walking Easier in Children With Cerebral Palsy? |
| NCT02633241 | PHASE4 | COMPLETED | A Pilot Study of Dexmedetomidine-Propofol in Children Undergoing Magnetic Resonance Imaging |
| NCT03117322 | PHASE4 | COMPLETED | Synbiotic, Prebiotics and Probiotics in Children With Cerebral Palsy and Constipation |
| NCT03648658 | PHASE4 | UNKNOWN | Paracetamol Study in Patients With Low Muscle Mass |
| NCT04074265 | PHASE4 | COMPLETED | Peri-operative Use of a Pain Injection in Pediatric Patients With Cerebral Palsy |
| NCT04273737 | PHASE4 | TERMINATED | Amantadine in Treating Cognitive & Motor Impairments in Adolescents and Adults With Cerebral Palsy |
| NCT04523935 | PHASE4 | COMPLETED | Excessive Crying in Children With Cerebral Palsy and Communication Deficits |
| NCT05887765 | PHASE4 | COMPLETED | Effect of Systematic Dexamethasone on the Duration of Popliteal Nerve Block for Anesthesia After Pediatric Ankle Surgery |
| NCT06176430 | PHASE4 | UNKNOWN | Comparison of Twice Weekly Versus Daily Iron Therapy in Treating Anemia in Children With Cerebral Palsy |
| NCT06189781 | PHASE4 | RECRUITING | Pain Injection Versus Epidural Anesthesia for Hip Surgery in Pediatric Patients With Cerebral Palsy |
| NCT03445650 | PHASE3 | COMPLETED | RESET Trial - Part 1 - A Phase 3 Trial in Subjects With Sjögren-Larsson Syndrome (SLS) |
| NCT00014989 | PHASE3 | COMPLETED | Beneficial Effects of Antenatal Magnesium Sulfate (BEAM Trial) |
| NCT00065949 | PHASE3 | UNKNOWN | Magnesium Sulfate to Prevent Brain Injury in Premature Infants |
| NCT00367068 | PHASE3 | COMPLETED | Dutch National ITB Study in Children With Cerebral Palsy |
| NCT00491894 | PHASE3 | COMPLETED | Safety and Efficacy Study of Oral Glycopyrrolate Liquid for the Treatment of Pathologic (Chronic Moderate to Severe) Drooling in Pediatric Patients 3 to 18 Years of Age With Cerebral Palsy or Other Neurologic Conditions |
| NCT00632528 | PHASE3 | COMPLETED | MEOPA to Improve Physical Therapy Results After Multilevel Surgery |
| NCT00822029 | PHASE3 | TERMINATED | Use of Oral Bisphosphonates in the Treatment of Osteoporosis of Non-walking Children With Cerebral Palsy |
| NCT00922077 | PHASE3 | COMPLETED | Individualized Neurodevelopmental Treatment |
| NCT01249417 | PHASE3 | COMPLETED | Dysport® Pediatric Lower Limb Spasticity Study |
| NCT01251380 | PHASE3 | COMPLETED | Dysport® Pediatric Lower Limb Spasticity Follow-on Study |
| NCT01437644 | PHASE3 | COMPLETED | The Post-Operative Pain in Cerebral Palsy (POPPIES) Trial |
| NCT01492608 | PHASE3 | COMPLETED | Magnesium Sulphate for Preterm Birth (MASP Study) |
| NCT01603602 | PHASE3 | COMPLETED | BOTOX® Treatment in Pediatric Upper Limb Spasticity |
| NCT01603615 | PHASE3 | COMPLETED | BOTOX® Open-Label Treatment in Pediatric Upper Limb Spasticity |
| NCT01603628 | PHASE3 | COMPLETED | BOTOX® Treatment in Pediatric Lower Limb Spasticity |
| NCT01603641 | PHASE3 | COMPLETED | BOTOX® Open-Label Treatment in Pediatric Lower Limb Spasticity |
| NCT01633736 | PHASE3 | UNKNOWN | Targeted Hip Strength Training in Children With Cerebral Palsy (CP) |
| NCT01898520 | PHASE3 | COMPLETED | A Safety, Efficacy and Tolerability Study of Sativex for the Treatment of Spasticity in Children Aged 8 to 18 Years |
| NCT01929434 | PHASE3 | COMPLETED | Efficacy of Stem Cell Transplantation Compared to Rehabilitation Treatment of Patients With Cerebral Paralysis |
| NCT02002884 | PHASE3 | COMPLETED | Dose-response Study of Efficacy and Safety of Botulinum Toxin Type A to Treat Spasticity of the Arm(s) or of Arm(s) and Leg(s) in Cerebral Palsy |
| NCT02270736 | PHASE3 | COMPLETED | Clinical Study to Investigate the Efficacy and Safety of NT 201 Compared to Placebo in the Treatment of Chronic Troublesome Drooling Associated With Neurological Disorders and/or Intellectual Disability |
| NCT02839785 | PHASE3 | TERMINATED | Analgesia and Physiotherapy in Children With Cerebral Palsy (ANTALKINECP) |
| NCT03110341 | PHASE3 | UNKNOWN | Effect of Erythropoietin in Premature Infants on White Matter Lesions and Neurodevelopmental Outcome |
| NCT03302871 | PHASE3 | COMPLETED | Integrated Management Enhances Functional Gains in Children With Cerebral Palsy Treated by BoNT-A |
Related Atlas pages
- Associated diseases: Sjogren-Larsson syndrome
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): cerebral palsy, Sjogren-Larsson syndrome