ALDOC
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Summary
ALDOC (aldolase, fructose-bisphosphate C, HGNC:418) is a protein-coding gene on chromosome 17q11.2, encoding Fructose-bisphosphate aldolase C (P09972). Catalyzes the reversible conversion of beta-D-fructose 1,6-bisphosphate (FBP) into two triose phosphate and plays a key role in glycolysis and gluconeogenesis.
This gene encodes a member of the class I fructose-biphosphate aldolase gene family. Expressed specifically in the hippocampus and Purkinje cells of the brain, the encoded protein is a glycolytic enzyme that catalyzes the reversible aldol cleavage of fructose-1,6-biphosphate and fructose 1-phosphate to dihydroxyacetone phosphate and either glyceraldehyde-3-phosphate or glyceraldehyde, respectively.
Source: NCBI Gene 230 — RefSeq curated summary.
At a glance
- Clinical variants (ClinVar): 54 total
- Druggable target: yes
- MANE Select transcript:
NM_005165
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:418 |
| Approved symbol | ALDOC |
| Name | aldolase, fructose-bisphosphate C |
| Location | 17q11.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000109107 |
| Ensembl biotype | protein_coding |
| OMIM | 103870 |
| Entrez | 230 |
Gene structure
Transcript identifiers
Ensembl transcripts: 19 — 18 protein_coding, 1 retained_intron
ENST00000226253, ENST00000395319, ENST00000395321, ENST00000435638, ENST00000460201, ENST00000578590, ENST00000581807, ENST00000582381, ENST00000584086, ENST00000854233, ENST00000854234, ENST00000854235, ENST00000854236, ENST00000918177, ENST00000918178, ENST00000918179, ENST00000949877, ENST00000949878, ENST00000949879
RefSeq mRNA: 1 — MANE Select: NM_005165
NM_005165
CCDS: CCDS11236
Canonical transcript exons
ENST00000226253 — 9 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000706694 | 28573735 | 28573934 |
| ENSE00001656772 | 28574494 | 28574577 |
| ENSE00001726461 | 28574067 | 28574241 |
| ENSE00002723853 | 28576801 | 28576895 |
| ENSE00002872258 | 28574952 | 28575006 |
| ENSE00003529546 | 28575123 | 28575334 |
| ENSE00003615085 | 28575421 | 28575544 |
| ENSE00003786450 | 28574696 | 28574856 |
| ENSE00003843474 | 28573120 | 28573621 |
Expression profiles
Bgee: expression breadth ubiquitous, 274 present calls, max score 99.86.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 32.8721 / max 1197.3543, expressed in 1685 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 165035 | 25.5725 | 1677 |
| 165034 | 7.2250 | 625 |
| 165033 | 0.0747 | 45 |
Top tissues by expression
297 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right hemisphere of cerebellum | UBERON:0014890 | 99.86 | gold quality |
| pons | UBERON:0000988 | 99.84 | gold quality |
| right frontal lobe | UBERON:0002810 | 99.81 | gold quality |
| cerebellar cortex | UBERON:0002129 | 99.73 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 99.73 | gold quality |
| cerebellum | UBERON:0002037 | 99.70 | gold quality |
| lateral nuclear group of thalamus | UBERON:0002736 | 99.68 | gold quality |
| amygdala | UBERON:0001876 | 99.65 | gold quality |
| nucleus accumbens | UBERON:0001882 | 99.63 | gold quality |
| cingulate cortex | UBERON:0003027 | 99.62 | gold quality |
| superior vestibular nucleus | UBERON:0007227 | 99.61 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 99.61 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 99.61 | gold quality |
| lateral globus pallidus | UBERON:0002476 | 99.57 | gold quality |
| prefrontal cortex | UBERON:0000451 | 99.56 | gold quality |
| putamen | UBERON:0001874 | 99.56 | gold quality |
| cerebellar vermis | UBERON:0004720 | 99.55 | gold quality |
| hypothalamus | UBERON:0001898 | 99.52 | gold quality |
| caudate nucleus | UBERON:0001873 | 99.51 | gold quality |
| postcentral gyrus | UBERON:0002581 | 99.50 | gold quality |
| ventral tegmental area | UBERON:0002691 | 99.49 | gold quality |
| parietal lobe | UBERON:0001872 | 99.48 | gold quality |
| inferior olivary complex | UBERON:0002127 | 99.47 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 99.43 | gold quality |
| substantia nigra pars compacta | UBERON:0001965 | 99.42 | gold quality |
| CA1 field of hippocampus | UBERON:0003881 | 99.41 | gold quality |
| temporal lobe | UBERON:0001871 | 99.38 | gold quality |
| Ammon’s horn | UBERON:0001954 | 99.38 | gold quality |
| medulla oblongata | UBERON:0001896 | 99.37 | gold quality |
| frontal cortex | UBERON:0001870 | 99.32 | gold quality |
Single-cell (SCXA)
Detected in 6 experiment(s), a significant marker in 6.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ENAD-21 | yes | 124.34 |
| E-MTAB-7316 | yes | 41.81 |
| E-GEOD-84465 | yes | 24.75 |
| E-CURD-46 | yes | 22.21 |
| E-MTAB-6701 | yes | 9.68 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): EGR1, EGR2, FOXM1, NR4A1, SP1
miRNA regulators (miRDB)
41 targeting ALDOC, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6077 | 99.99 | 68.04 | 2299 |
| HSA-MIR-4487 | 99.96 | 64.58 | 1252 |
| HSA-MIR-6721-5P | 99.93 | 68.92 | 2981 |
| HSA-MIR-10527-5P | 99.91 | 72.28 | 3754 |
| HSA-MIR-4668-5P | 99.79 | 70.58 | 3782 |
| HSA-MIR-548AJ-5P | 99.78 | 71.12 | 3085 |
| HSA-MIR-548G-5P | 99.78 | 71.12 | 3085 |
| HSA-MIR-548X-5P | 99.78 | 71.12 | 3085 |
| HSA-MIR-548F-5P | 99.78 | 71.02 | 3093 |
| HSA-MIR-6764-5P | 99.75 | 67.89 | 2304 |
| HSA-MIR-6885-3P | 99.75 | 70.36 | 3187 |
| HSA-MIR-12129 | 99.72 | 67.45 | 1311 |
| HSA-MIR-4729 | 99.69 | 72.18 | 4233 |
| HSA-MIR-7-5P | 99.67 | 70.53 | 1809 |
| HSA-MIR-3202 | 99.66 | 67.70 | 2737 |
| HSA-MIR-1915-3P | 99.58 | 66.79 | 1988 |
| HSA-MIR-4441 | 99.49 | 66.56 | 3216 |
| HSA-MIR-19A-5P | 99.36 | 66.93 | 1675 |
| HSA-MIR-19B-1-5P | 99.36 | 67.07 | 1669 |
| HSA-MIR-19B-2-5P | 99.36 | 67.07 | 1669 |
| HSA-MIR-4999-5P | 99.35 | 69.15 | 926 |
| HSA-MIR-6505-3P | 99.34 | 67.39 | 1071 |
| HSA-MIR-3194-3P | 98.83 | 66.22 | 1167 |
| HSA-MIR-6840-3P | 98.68 | 65.95 | 1923 |
| HSA-MIR-6728-3P | 98.63 | 67.63 | 1534 |
| HSA-MIR-9500 | 98.62 | 66.54 | 1845 |
| HSA-MIR-3944-5P | 98.50 | 67.55 | 997 |
| HSA-MIR-4726-3P | 98.49 | 63.89 | 1385 |
| HSA-MIR-1233-5P | 98.19 | 66.71 | 1201 |
| HSA-MIR-6778-5P | 98.19 | 66.59 | 1239 |
Literature-anchored findings (GeneRIF, showing 17)
- Diverse ALDOC promoter regions are required to direct specific LacZ expression in the hippocampus and Purkinje cells if transgenic mice. (PMID:15589842)
- This protein has been found differentially expressed in the temporal lobe from patients with schizophrenia. (PMID:19034380)
- This protein has been found differentially expressed in the dorsolateral prefrontal cortex from patients with schizophrenia. (PMID:19110265)
- This protein has been found differentially expressed in the Wernicke’s Area from patients with schizophrenia. (PMID:19405953)
- Results identified fructose bisphospate aldolase C that showed elevated levels of protein carbonyls in inferior parietal lobule (IPL) from subjects with early stage-Alzheimer’s disease. (PMID:19686046)
- This protein has been found differentially expressed in the anterior cingulate cortex in men patients with schizophrenia. (PMID:20381070)
- residues 85-102 harbor the epitope-containing region recognized by MAb 9F (PMID:24525694)
- ALDOC, Aldolase A (ALDOA) and Aldolase B (ALDOB) activate Wnt signaling. (PMID:24993527)
- NME1 enhanced ALDOC transcription, evidenced by increased expression of ALDOC pre-mRNA and activity of an ALDOC promoter-luciferase module. This is the first study to indicate that NME1 induces transcription through its direct binding to the promoter region of a target gene. (PMID:30396920)
- MUC16 C-terminal binding with ALDOC disrupts the ability of ALDOC to sense glucose and promotes gallbladder carcinoma growth. (PMID:32502493)
- EPB41 suppresses the Wnt/beta-catenin signaling in non-small cell lung cancer by sponging ALDOC. (PMID:33242559)
- The melanoma brain metastatic microenvironment: aldolase C partakes in shaping the malignant phenotype of melanoma cells - a case of inter-tumor heterogeneity. (PMID:33274599)
- BCDIN3D RNA methyltransferase stimulates Aldolase C expression and glycolysis through let-7 microRNA in breast cancer cells. (PMID:33664453)
- Identification of 4-methylation driven genes based prognostic signature in thyroid cancer: an integrative analysis based on the methylmix algorithm. (PMID:34456184)
- Overexpression of aldolase, fructose-bisphosphate C and its association with spheroid formation in colorectal cancer. (PMID:35147255)
- ALDOC- and ENO2- driven glucose metabolism sustains 3D tumor spheroids growth regardless of nutrient environmental conditions: a multi-omics analysis. (PMID:36945054)
- ALDOC regulated the biological function and immune infiltration of gastric cancer cells. (PMID:36997056)
Cross-species orthologs
7 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | aldoca | ENSDARG00000057661 |
| mus_musculus | Aldoc | ENSMUSG00000017390 |
| rattus_norvegicus | Aldoc | ENSRNOG00000011452 |
| drosophila_melanogaster | Ald1 | FBGN0000064 |
| drosophila_melanogaster | Ald2 | FBGN0039425 |
| caenorhabditis_elegans | WBGENE00011474 | |
| caenorhabditis_elegans | WBGENE00017166 |
Paralogs (2): ALDOB (ENSG00000136872), ALDOA (ENSG00000149925)
Protein
Protein identifiers
Fructose-bisphosphate aldolase C — P09972 (reviewed: P09972)
Alternative names: Brain-type aldolase
All UniProt accessions (8): P09972, A0A024QZ64, A8MVZ9, C9J8F3, J3KSV6, J3QKK1, J3QKP5, K7EKH5
UniProt curated annotations — full annotation on UniProt →
Function. Catalyzes the reversible conversion of beta-D-fructose 1,6-bisphosphate (FBP) into two triose phosphate and plays a key role in glycolysis and gluconeogenesis.
Subunit / interactions. Homotetramer. Interacts with ATP6V1E1. May interact with PLD2.
Pathway. Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 4/4.
Miscellaneous. In vertebrates, three forms of this ubiquitous glycolytic enzyme are found, aldolase A in muscle, aldolase B in liver and aldolase C in brain.
Similarity. Belongs to the class I fructose-bisphosphate aldolase family.
RefSeq proteins (1): NP_005156* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000741 | FBA_I | Family |
| IPR013785 | Aldolase_TIM | Homologous_superfamily |
| IPR029768 | Aldolase_I_AS | Conserved_site |
Pfam: PF00274
Catalyzed reactions (Rhea), 1 shown:
- beta-D-fructose 1,6-bisphosphate = D-glyceraldehyde 3-phosphate + dihydroxyacetone phosphate (RHEA:14729)
UniProt features (41 total): helix 14, strand 10, modified residue 6, turn 4, active site 2, binding site 2, chain 1, sequence conflict 1, site 1
Structure
Experimental structures (PDB)
1 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 1XFB | X-RAY DIFFRACTION | 3 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P09972-F1 | 96.43 | 0.94 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (3): 188 (proton acceptor); 230 (schiff-base intermediate with dihydroxyacetone-p); 364 (necessary for preference for fructose 1,6-bisphosphate over fructose 1-phosphate)
Ligand- & substrate-binding residues (2): 56; 147
Post-translational modifications (6): 111, 132, 5, 36, 39, 45
Function
Pathways and Gene Ontology
Reactome pathways
8 pathways
| ID | Pathway |
|---|---|
| R-HSA-6798695 | Neutrophil degranulation |
| R-HSA-70171 | Glycolysis |
| R-HSA-70263 | Gluconeogenesis |
| R-HSA-1430728 | Metabolism |
| R-HSA-168249 | Innate Immune System |
| R-HSA-168256 | Immune System |
| R-HSA-70326 | Glucose metabolism |
| R-HSA-71387 | Metabolism of carbohydrates and carbohydrate derivatives |
MSigDB gene sets: 314 (showing top):
MORF_RAGE, GOBP_EPITHELIUM_DEVELOPMENT, GOBP_NUCLEOSIDE_DIPHOSPHATE_METABOLIC_PROCESS, REACTOME_INNATE_IMMUNE_SYSTEM, GOCC_SECRETORY_GRANULE, SP3_Q3, BOYAULT_LIVER_CANCER_SUBCLASS_G2, MENSE_HYPOXIA_UP, GOBP_CARBOHYDRATE_DERIVATIVE_CATABOLIC_PROCESS, SHAFFER_IRF4_TARGETS_IN_ACTIVATED_B_LYMPHOCYTE, GOBP_ORGANOPHOSPHATE_METABOLIC_PROCESS, CERVERA_SDHB_TARGETS_1_DN, KEGG_GLYCOLYSIS_GLUCONEOGENESIS, GOBP_MONOCARBOXYLIC_ACID_METABOLIC_PROCESS, COLIN_PILOCYTIC_ASTROCYTOMA_VS_GLIOBLASTOMA_UP
GO Biological Process (5): fructose metabolic process (GO:0006000), gluconeogenesis (GO:0006094), glycolytic process (GO:0006096), fructose 1,6-bisphosphate metabolic process (GO:0030388), epithelial cell differentiation (GO:0030855)
GO Molecular Function (4): fructose-bisphosphate aldolase activity (GO:0004332), cytoskeletal protein binding (GO:0008092), protein binding (GO:0005515), lyase activity (GO:0016829)
GO Cellular Component (7): extracellular region (GO:0005576), cytosol (GO:0005829), cytoskeleton (GO:0005856), secretory granule lumen (GO:0034774), extracellular exosome (GO:0070062), tertiary granule lumen (GO:1904724), ficolin-1-rich granule lumen (GO:1904813)
Reactome top-level categories
Rollup of top-5 pathways:
| Category | Pathways |
|---|---|
| Glucose metabolism | 2 |
| Innate Immune System | 1 |
| Immune System | 1 |
| Metabolism of carbohydrates and carbohydrate derivatives | 1 |
| Metabolism | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 2 |
| intracellular organelle lumen | 2 |
| hexose metabolic process | 1 |
| glucose metabolic process | 1 |
| hexose biosynthetic process | 1 |
| phosphoglycerate kinase activity | 1 |
| phosphoglycerate mutase activity | 1 |
| phosphopyruvate hydratase activity | 1 |
| pyruvate kinase activity | 1 |
| pyruvate metabolic process | 1 |
| generation of precursor metabolites and energy | 1 |
| aerobic respiration | 1 |
| carbohydrate catabolic process | 1 |
| pyridine nucleotide catabolic process | 1 |
| glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (phosphorylating) activity | 1 |
| ADP catabolic process | 1 |
| ATP metabolic process | 1 |
| nicotinamide nucleotide metabolic process | 1 |
| organophosphate metabolic process | 1 |
| carbohydrate derivative metabolic process | 1 |
| cell differentiation | 1 |
| epithelium development | 1 |
| aldehyde-lyase activity | 1 |
| protein binding | 1 |
| binding | 1 |
| catalytic activity | 1 |
| cytoplasm | 1 |
| intracellular membraneless organelle | 1 |
| secretory granule | 1 |
| cytoplasmic vesicle lumen | 1 |
| extracellular vesicle | 1 |
| tertiary granule | 1 |
| ficolin-1-rich granule | 1 |
Protein interactions and networks
STRING
2030 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ALDOC | GAPDH | P00354 | 862 |
| ALDOC | GPI | P06744 | 767 |
| ALDOC | TPI1 | P00938 | 693 |
| ALDOC | PFKL | P17858 | 676 |
| ALDOC | PFKP | Q01813 | 666 |
| ALDOC | PGK1 | P00558 | 665 |
| ALDOC | PKLR | P11973 | 653 |
| ALDOC | ENO1 | P06733 | 645 |
| ALDOC | PFKM | P08237 | 640 |
| ALDOC | ENO2 | P09104 | 636 |
| ALDOC | PGAM4 | Q8N0Y7 | 632 |
| ALDOC | PGAM1 | P18669 | 629 |
| ALDOC | LDHA | P00338 | 627 |
| ALDOC | ENO3 | P13929 | 626 |
| ALDOC | PKM | P14618 | 613 |
IntAct
65 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| ALDOA | ALDOC | psi-mi:“MI:0914”(association) | 0.790 |
| ALDOC | ALDOA | psi-mi:“MI:0915”(physical association) | 0.790 |
| ALDOA | ALDOC | psi-mi:“MI:0915”(physical association) | 0.790 |
| ALDOC | ALDOA | psi-mi:“MI:0915”(physical association) | 0.720 |
| LNX1 | ALDOC | psi-mi:“MI:0915”(physical association) | 0.720 |
| ALDOA | ALDOC | psi-mi:“MI:0915”(physical association) | 0.720 |
| ALDOC | LNX1 | psi-mi:“MI:0915”(physical association) | 0.720 |
| CFTR | ESYT2 | psi-mi:“MI:0914”(association) | 0.710 |
| CFTR | ALDOC | psi-mi:“MI:0915”(physical association) | 0.640 |
| ALDOC | ANKS1A | psi-mi:“MI:0915”(physical association) | 0.560 |
| ALDOB | ALDOA | psi-mi:“MI:0914”(association) | 0.550 |
| ALDOA | ALDOB | psi-mi:“MI:0914”(association) | 0.550 |
| CFTR | PLEKHG3 | psi-mi:“MI:0914”(association) | 0.480 |
| ALDOC | PKM | psi-mi:“MI:0217”(phosphorylation reaction) | 0.440 |
| ERBB2 | ALDOC | psi-mi:“MI:0915”(physical association) | 0.370 |
| ALDOC | FMR1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| S100A9 | ALDOC | psi-mi:“MI:0915”(physical association) | 0.370 |
| ALDOC | MAP2K3 | psi-mi:“MI:0915”(physical association) | 0.370 |
| ALDOC | SQLE | psi-mi:“MI:0915”(physical association) | 0.370 |
| NEK4 | E2F8 | psi-mi:“MI:0914”(association) | 0.350 |
| COPS5 | FBLL1 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (181): ALDOC (Two-hybrid), LNX1 (Two-hybrid), ALDOC (Affinity Capture-RNA), ALDOC (Affinity Capture-RNA), ALDOC (Affinity Capture-RNA), ALDOA (Affinity Capture-MS), ACTN4 (Co-fractionation), ALDOA (Co-fractionation), ALDOC (Co-fractionation), ALDOC (Co-fractionation), ALDOC (Co-fractionation), ALDOC (Co-fractionation), ALDOC (Co-fractionation), ALDOC (Co-fractionation), ALDOC (Co-fractionation)
ESM2 similar proteins: A5A6I5, B5DGM7, F4KGQ0, O65581, O65735, P00883, P00884, P04075, P05062, P05063, P05064, P05065, P07341, P07764, P08440, P09117, P09972, P14223, P17784, P22197, P29356, P46256, P46257, P46563, P49577, P52210, P53442, P53445, P53446, P53447, P53448, P54216, P79226, Q10A30, Q27744, Q3T0S5, Q4KMC8, Q5N725, Q5NVR5, Q5R1X4
Diamond homologs: A5A6I5, B5DGM7, F4KGQ0, O65581, O65735, P00883, P00884, P04075, P05062, P05063, P05064, P05065, P07341, P07752, P07764, P08440, P09117, P09972, P14223, P16096, P17784, P22197, P29356, P46256, P46257, P46563, P49577, P52210, P53442, P53445, P53446, P53447, P53448, P53449, P54216, P79226, P86979, P91759, Q01516, Q01517
SIGNOR signaling
3 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| ALDOC | “up-regulates quantity” | “D-glyceraldehyde 3-phosphate(2-)” | “chemical modification” |
| ALDOC | “up-regulates quantity” | “glycerone phosphate(2-)” | “chemical modification” |
| ALDOC | “down-regulates quantity” | “beta-D-fructofuranose 1,6-bisphosphate(4-)” | “chemical modification” |
Disease & clinical
Clinical variants and AI predictions
ClinVar
54 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 45 |
| Likely benign | 3 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1047 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 17:28573738:AG:A | donor_gain | 1.0000 |
| 17:28573738:AGC:A | donor_gain | 1.0000 |
| 17:28573739:G:C | donor_gain | 1.0000 |
| 17:28573754:T:TA | donor_gain | 1.0000 |
| 17:28573755:C:CA | donor_gain | 1.0000 |
| 17:28573930:CACTC:C | acceptor_gain | 1.0000 |
| 17:28573932:CTC:C | acceptor_gain | 1.0000 |
| 17:28573933:TCC:T | acceptor_loss | 1.0000 |
| 17:28573934:CC:C | acceptor_loss | 1.0000 |
| 17:28573934:CCTAG:C | acceptor_gain | 1.0000 |
| 17:28573936:T:G | acceptor_loss | 1.0000 |
| 17:28573938:G:C | acceptor_gain | 1.0000 |
| 17:28573938:G:GC | acceptor_gain | 1.0000 |
| 17:28573940:G:GC | acceptor_gain | 1.0000 |
| 17:28574062:AGTAC:A | donor_loss | 1.0000 |
| 17:28574063:GTA:G | donor_loss | 1.0000 |
| 17:28574065:A:C | donor_loss | 1.0000 |
| 17:28574066:CCTGG:C | donor_loss | 1.0000 |
| 17:28574237:AAGAC:A | acceptor_gain | 1.0000 |
| 17:28574238:AGAC:A | acceptor_gain | 1.0000 |
| 17:28574240:AC:A | acceptor_gain | 1.0000 |
| 17:28574241:CC:C | acceptor_gain | 1.0000 |
| 17:28574242:C:CC | acceptor_gain | 1.0000 |
| 17:28574489:CTCA:C | donor_loss | 1.0000 |
| 17:28574490:TCA:T | donor_loss | 1.0000 |
| 17:28574491:CA:C | donor_loss | 1.0000 |
| 17:28574493:CCTT:C | donor_gain | 1.0000 |
| 17:28574573:CCATT:C | acceptor_gain | 1.0000 |
| 17:28574574:CATT:C | acceptor_gain | 1.0000 |
| 17:28574574:CATTC:C | acceptor_gain | 1.0000 |
AlphaMissense
2350 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 17:28573848:A:G | W296R | 1.000 |
| 17:28573848:A:T | W296R | 1.000 |
| 17:28574702:G:C | C178W | 1.000 |
| 17:28574794:A:G | W148R | 1.000 |
| 17:28574794:A:T | W148R | 1.000 |
| 17:28574795:C:A | K147N | 1.000 |
| 17:28574795:C:G | K147N | 1.000 |
| 17:28574856:C:T | G127E | 1.000 |
| 17:28574952:C:G | G127R | 1.000 |
| 17:28574952:C:T | G127R | 1.000 |
| 17:28575123:C:A | K108N | 1.000 |
| 17:28575123:C:G | K108N | 1.000 |
| 17:28575432:T:A | D34V | 1.000 |
| 17:28575433:C:G | D34H | 1.000 |
| 17:28573826:C:T | G303E | 0.999 |
| 17:28573834:G:C | F300L | 0.999 |
| 17:28573834:G:T | F300L | 0.999 |
| 17:28573836:A:G | F300L | 0.999 |
| 17:28573883:A:G | L284P | 0.999 |
| 17:28573916:C:T | G273E | 0.999 |
| 17:28573922:A:G | L271P | 0.999 |
| 17:28573922:A:T | L271Q | 0.999 |
| 17:28573925:A:G | F270S | 0.999 |
| 17:28573934:C:T | G267E | 0.999 |
| 17:28574072:A:T | V265D | 0.999 |
| 17:28574090:C:G | R259P | 0.999 |
| 17:28574176:C:A | K230N | 0.999 |
| 17:28574176:C:G | K230N | 0.999 |
| 17:28574554:T:A | E188D | 0.999 |
| 17:28574554:T:G | E188D | 0.999 |
dbSNP variants (sampled 300 via entrez): RS1001131257 (17:28576786 C>T), RS1001161195 (17:28576305 G>A), RS1001293858 (17:28577162 T>TA), RS1001310555 (17:28577035 C>A,T), RS1001502500 (17:28576485 G>A,T), RS1001818712 (17:28575957 G>A), RS1002798900 (17:28577183 G>A), RS1003138681 (17:28573377 T>C), RS1003520994 (17:28577437 C>T), RS1004520966 (17:28574583 G>A), RS1006390377 (17:28577803 C>A,G), RS1006919508 (17:28576670 G>T), RS1006989354 (17:28572734 C>T), RS1007688701 (17:28577116 C>A), RS1008681882 (17:28578165 G>A,T)
Disease associations
OMIM: gene MIM:103870 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL4295709 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
118 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | affects expression, decreases expression, increases expression | 5 |
| sodium arsenite | decreases expression, increases expression | 4 |
| Oxygen | increases expression | 4 |
| Cisplatin | increases expression, increases reaction, decreases expression | 3 |
| Tretinoin | decreases expression, increases expression | 3 |
| Valproic Acid | affects expression, decreases expression, decreases methylation | 3 |
| Cyclosporine | decreases expression | 3 |
| cobaltous chloride | increases expression, decreases reaction | 2 |
| nickel sulfate | increases expression | 2 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, decreases expression | 2 |
| bisphenol S | affects cotreatment, increases expression | 2 |
| (+)-JQ1 compound | increases expression | 2 |
| Arsenic Trioxide | affects binding, decreases reaction, decreases expression | 2 |
| Doxorubicin | affects expression, decreases expression | 2 |
| Niclosamide | increases expression, decreases expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, decreases expression | 2 |
| Tetrachlorodibenzodioxin | decreases expression | 2 |
| Tobacco Smoke Pollution | affects expression, increases expression | 2 |
| Tunicamycin | decreases expression, increases expression | 2 |
| p-Chloromercuribenzoic Acid | affects cotreatment, decreases expression | 2 |
| Particulate Matter | decreases expression, increases abundance, affects cotreatment | 2 |
| aristolochic acid I | increases expression | 1 |
| GSK-J4 | increases expression | 1 |
| afuresertib | increases expression | 1 |
| bisphenol F | increases expression | 1 |
| sotorasib | affects cotreatment, decreases expression | 1 |
| 2,4,6-tribromophenol | decreases expression | 1 |
| alpha phellandrene | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| deoxynivalenol | decreases expression | 1 |
ChEMBL screening assays
1 unique, capped per target: 1 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4119012 | Binding | Binding affinity to ALDOC in human NCI-H358 cells at 1 uM by mass spectrometry based pull down assay | Studies of TAK1-centered polypharmacology with novel covalent TAK1 inhibitors. — Bioorg Med Chem |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.