ALG13-AS1

Summary

ALG13-AS1 (ALG13 antisense RNA 1, HGNC:41277) is a long non-coding RNA gene on chromosome Xq23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41277
Approved symbol	ALG13-AS1
Name	ALG13 antisense RNA 1
Location	Xq23
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229487
Ensembl biotype	lncRNA
Entrez	106478971
RNAcentral	URS0000576C61 — ncRNA, 195 nt, 2 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000430794

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000430794 — 2 exons

Exon	Start	End
ENSE00001662432	111706649	111706737
ENSE00001727131	111710996	111711101

Expression profiles

Bgee: expression breadth ubiquitous, 124 present calls, max score 92.15.

Top tissues by expression

124 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
corpus callosum	UBERON:0002336	92.15	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	89.06	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	88.62	gold quality
endometrium	UBERON:0001295	81.04	gold quality
right uterine tube	UBERON:0001302	79.27	gold quality
bone marrow cell	CL:0002092	77.63	gold quality
skeletal muscle tissue	UBERON:0001134	76.56	gold quality
calcaneal tendon	UBERON:0003701	74.78	gold quality
prefrontal cortex	UBERON:0000451	74.71	gold quality
right lung	UBERON:0002167	74.71	gold quality
bone marrow	UBERON:0002371	74.50	gold quality
monocyte	CL:0000576	74.44	gold quality
mucosa of stomach	UBERON:0001199	74.21	gold quality
myometrium	UBERON:0001296	73.23	gold quality
right ovary	UBERON:0002118	73.10	gold quality
skin of abdomen	UBERON:0001416	73.06	gold quality
body of pancreas	UBERON:0001150	73.03	gold quality
left ovary	UBERON:0002119	73.00	gold quality
ovary	UBERON:0000992	72.73	gold quality
body of uterus	UBERON:0009853	72.69	gold quality
adrenal tissue	UBERON:0018303	72.61	gold quality
zone of skin	UBERON:0000014	72.59	gold quality
pancreas	UBERON:0001264	72.44	gold quality
tibial nerve	UBERON:0001323	72.29	gold quality
endocervix	UBERON:0000458	72.20	gold quality
subcutaneous adipose tissue	UBERON:0002190	72.20	gold quality
skin of leg	UBERON:0001511	72.07	gold quality
fundus of stomach	UBERON:0001160	71.95	gold quality
stromal cell of endometrium	CL:0002255	71.77	gold quality
primary visual cortex	UBERON:0002436	71.70	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.