ALOX15B

gene
On this page

Also known as 15-LOX-2

Summary

ALOX15B (arachidonate 15-lipoxygenase type B, HGNC:434) is a protein-coding gene on chromosome 17p13.1, encoding Polyunsaturated fatty acid lipoxygenase ALOX15B (O15296). Non-heme iron-containing dioxygenase that catalyzes the stereo-specific peroxidation of free and esterified polyunsaturated fatty acids (PUFAs) generating a spectrum of bioactive lipid mediators.

This gene encodes a member of the lipoxygenase family of structurally related nonheme iron dioxygenases involved in the production of fatty acid hydroperoxides. The encoded protein converts arachidonic acid exclusively to 15S-hydroperoxyeicosatetraenoic acid, while metabolizing linoleic acid less effectively. This gene is located in a cluster of related genes and a pseudogene that spans approximately 100 kilobases on the short arm of chromosome 17. Alternatively spliced transcript variants encoding different isoforms have been described.

Source: NCBI Gene 247 — RefSeq curated summary.

At a glance

  • GWAS associations: 4
  • Clinical variants (ClinVar): 137 total
  • Druggable target: yes — 1 molecules with ChEMBL bioactivity
  • MANE Select transcript: NM_001141

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:434
Approved symbolALOX15B
Namearachidonate 15-lipoxygenase type B
Location17p13.1
Locus typegene with protein product
StatusApproved
Aliases15-LOX-2
Ensembl geneENSG00000179593
Ensembl biotypeprotein_coding
OMIM603697
Entrez247

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 6 protein_coding, 1 retained_intron

ENST00000380173, ENST00000380183, ENST00000571240, ENST00000572022, ENST00000573359, ENST00000944447, ENST00000944448

RefSeq mRNA: 3 — MANE Select: NM_001141 NM_001039130, NM_001039131, NM_001141

CCDS: CCDS11128, CCDS32558, CCDS32559

Canonical transcript exons

ENST00000380183 — 14 exons

ExonStartEnd
ENSE0000124178180427818042884
ENSE0000124179280423698042491
ENSE0000268408980390598039302
ENSE0000346278980393868039605
ENSE0000346615580475648047664
ENSE0000351557580452388045384
ENSE0000354173380477458047915
ENSE0000354856680483868049134
ENSE0000356405880469078047076
ENSE0000358904780399028039983
ENSE0000363429180448298045001
ENSE0000363711380454838045686
ENSE0000364846980472588047379
ENSE0000366058680466688046754

Expression profiles

Bgee: expression breadth ubiquitous, 178 present calls, max score 96.51.

FANTOM5 (CAGE): breadth broad, TPM avg 2.1753 / max 137.2251, expressed in 304 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter IDTPM avgSamples expressed
1594532.0109290
1594540.090146
1594520.074336

Top tissues by expression

286 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
upper leg skinUBERON:000426296.51gold quality
lower esophagus mucosaUBERON:003583491.99gold quality
esophagus mucosaUBERON:000246990.44gold quality
upper arm skinUBERON:000426389.63gold quality
mammalian vulvaUBERON:000099789.11gold quality
cervix squamous epitheliumUBERON:000692288.59gold quality
prostate glandUBERON:000236787.29gold quality
right lungUBERON:000216786.29gold quality
nippleUBERON:000203085.45gold quality
vaginaUBERON:000099683.29gold quality
skin of legUBERON:000151183.29gold quality
zone of skinUBERON:000001482.76gold quality
skin of abdomenUBERON:000141682.54gold quality
cervix epitheliumUBERON:000480182.40gold quality
upper lobe of lungUBERON:000894881.33gold quality
upper lobe of left lungUBERON:000895281.15gold quality
lower lobe of lungUBERON:000894980.03gold quality
epithelium of esophagusUBERON:000197678.41gold quality
male germ line stem cell (sensu Vertebrata) in testisCL:0000089 ∩ UBERON:000047378.22gold quality
olfactory segment of nasal mucosaUBERON:000538678.04gold quality
buccal mucosa cellCL:000233677.81gold quality
squamous epitheliumUBERON:000691476.79gold quality
esophagus squamous epitheliumUBERON:000692076.65gold quality
lungUBERON:000204875.71gold quality
gingival epitheliumUBERON:000194974.85gold quality
esophagusUBERON:000104374.34gold quality
gingivaUBERON:000182873.26gold quality
penisUBERON:000098973.10gold quality
oviduct epitheliumUBERON:000480472.09gold quality
body of stomachUBERON:000116171.21gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

ExperimentMarker?Max mean expression
E-ANND-3yes24.57

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): NR3C1, SP1, SP2, SP3

miRNA regulators (miRDB)

24 targeting ALOX15B, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-6867-5P100.0082.213464
HSA-MIR-150-5P99.9966.691976
HSA-MIR-477599.9875.006394
HSA-MIR-4731-5P99.8967.232537
HSA-MIR-5010-3P99.8370.602357
HSA-MIR-6842-5P99.8067.541587
HSA-MIR-7110-5P99.8067.841712
HSA-MIR-205299.7969.372031
HSA-MIR-92A-2-5P99.7567.012164
HSA-MIR-6752-5P99.5967.321243
HSA-MIR-4797-5P99.3968.011354
HSA-MIR-4652-3P99.3370.022742
HSA-MIR-3191-5P99.2466.521722
HSA-MIR-445198.8268.171455
HSA-MIR-26B-3P98.7167.491102
HSA-MIR-619-5P98.5764.971988
HSA-MIR-5589-5P98.3464.821148
HSA-MIR-410-5P96.5566.28459
HSA-MIR-425696.2267.70669
HSA-MIR-323B-5P96.1266.39472
HSA-MIR-11181-5P96.1267.46665
HSA-MIR-541-3P96.0766.111271
HSA-MIR-654-5P96.0766.181280
HSA-MIR-494-5P95.3166.29463

Literature-anchored findings (GeneRIF, showing 35)

  • a negative cell cycle regulator in normal prostate epithelial cells, but not present in prostatic neoplasms (PMID:11839751)
  • 15-LOX-2 expression is lost in esophageal cancers and the induction of 15-LOX-2 can inhibit cancer cell proliferation (PMID:12659684)
  • 15-LOX2 and its splice variants suppress prostate tumor development (PMID:12704195)
  • Sp1 and Sp3 proteins play a physiologically important role in positively and negatively regulating the 15-LOX2 gene expression, respectively. (PMID:15247906)
  • angiotensin II upregulates LOX-1 and 12-LO and 15-LO expression in human vascular smooth muscle cells (PMID:15797645)
  • feedback mechanisms may contribute to the loss of 15-LOX-2 pathway components, which coincide with an increase in PPAR-gamma in many epithelial cancers (PMID:15799828)
  • Reduction of isoforms of 15-lipoxygenase (15-LOX)-1 and 15-LOX-2 in human breast cancer (PMID:16556493)
  • Crosstalk mechanisms exist between the 15-LOX-2 gene and peroxisome proliferator-activated receptor gamma (PPARgamma) to counterbalance expression and help explain the inverse relationship of these genes in normal prostate versus prostate cancer cells. (PMID:16682954)
  • Loss of heterozygosity on 17p13 and down-regulation of ALOX15B can be used to discriminate adrenal cortex neoplasms from adrenocortical adenoma. (PMID:18156936)
  • 13-(S)-hydroxyoctadecadienoic acid (13-HODE) is docked to solvent-exposed histidines of a 15-hLOX-2 homology model and found to bind well with histidine627, suggesting a potential location for the allosteric site. (PMID:19645454)
  • Expression of 8S-LOX and 15S-LOX-2 suppresses CRD-BP/IMP-1 expression, resulting in inhibition of human prostate carcinoma PC-3 cell proliferation. (PMID:19661680)
  • Results from this study suggest a 125-bp region (-157 to -33) is critical for the 15-LOX-2 promoter activity in prostate epithelial cells and cancer cells (PMID:20428779)
  • White tea extract induces apoptosis via PPAR gamma and 15-lipoxygenases. (PMID:20668019)
  • In summary, we observed associations between high ALOX15B expression in carotid lesions and a history of cerebrovascular symptoms. (PMID:21316676)
  • Tumor-associated macrophages isolated from RCC tumors had a high 15-LOX2 expression and secreted substantial amounts of 15(S)-hydroxyeicosatetraenoic acid. (PMID:21900394)
  • The C2-domain is not essential for catalytic activity and does hardly impact reaction specificity. (PMID:21951814)
  • Data indicate that expressions of 15-LO-1 and 15-LO-2 in placentas and umbilical artery (HUA) rings in preeclampsia (PE) increased more than that in normal groups. (PMID:22078795)
  • ALOX15B is the mainly expressed 12/15-lipoxygenase in human macrophages and that its expression is induced by IL-4, LPS and hypoxia. (PMID:22980500)
  • The ALOX15B gene may be associated with coronary artery disease. (PMID:24373925)
  • Positive feedback-loop of TERT and 15-lipoxygenase-2 promotes pulmonary hypertension. (PMID:24376652)
  • Presented is the crystal structure of 15-LOX-2 in complex with an inhibitor that appears to bind as a substrate mimic. 15-LOX-2 contains a long loop, composed of hydrophobic amino acids, which projects from the amino-terminal membrane-binding domain. (PMID:24497644)
  • activated ALOX15B in macrophages may play a role in the induction of atherothrombotic events by increasing platelet aggregation and thrombin generation (PMID:24533104)
  • 15-LOX2 expression inhibits Myc-induced prostate cancer development, such that in the 3-month- and 6-month-old double transgenic mice, there is a significant reduction in prostate intraneoplasia. (PMID:24732589)
  • ALOX15 rs11568070 polymorphisms did not discriminate for the disease or its severity. (PMID:24975552)
  • Hpoxia-induced pulmonary vascular remodeling is associated with increased levels of 15-LO-2. (PMID:25895668)
  • This study combined molecular dynamics simulations, QM/MM calculations, and umbrella sampling free energy simulations to study the hydrogen atom abstraction from arachidonic acid catalyzed by the human enzyme 15-lipoxygenase-2. (PMID:26918937)
  • these results demonstrate the strict regiospecificity of h15-LOX-2 that circumscribes its role in transcellular synthesis. (PMID:27145229)
  • 15-LOX-2 is distributed at the plasma membrane when cells are stimulated by the addition Ca(2+) ionophore and that cellular localization is dependent upon the presence of a putative membrane insertion loop. (PMID:27435673)
  • Ca(2+) binding induces major structural changes in the 15-lipoxygenase-2 PLAT domain. (PMID:28809482)
  • Results demonstrate the expression of ALOX15 and ALOX15B in failing as well as in donor hearts. ALOX15/B signaling may play an important role in heart disease, including heart failure. Isolated fibroblasts from all four chambers of the heart expressed ALOX15 as well as ALOX15B, and gene expression levels were further increased under hypoxia. (PMID:30138423)
  • we identified a novel role for ALOX15B, and to a lesser extent ALOX15, in cholesterol homeostasis and CCL17 production in human macrophages. (PMID:30197642)
  • ALOX15B expression and up-regulation in the functional and non-functional pituitary adenomas. (PMID:31288808)
  • Low 15-LOX-2 expression is associated with lung carcinogenesis. (PMID:31420013)
  • 15-lipoxygenase and cyclooxygenase expression profile and their related modulators in COVID-19 infection. (PMID:37716021)
  • ALOX15B controls macrophage cholesterol homeostasis via lipid peroxidation, ERK1/2 and SREBP2. (PMID:38581859)

Cross-species orthologs

2 orthologs

OrganismSymbolGene ID
mus_musculusAlox8ENSMUSG00000020891
rattus_norvegicusAlox15bENSRNOG00000007778

Paralogs (5): ALOX5 (ENSG00000012779), ALOX12 (ENSG00000108839), ALOX15 (ENSG00000161905), ALOXE3 (ENSG00000179148), ALOX12B (ENSG00000179477)

Protein

Protein identifiers

Polyunsaturated fatty acid lipoxygenase ALOX15BO15296 (reviewed: O15296)

Alternative names: 15-lipoxygenase 2, Arachidonate 15-lipoxygenase B, Arachidonate 15-lipoxygenase type II, Linoleate 13-lipoxygenase 15-LOb

All UniProt accessions (2): I3L1D5, O15296

UniProt curated annotations — full annotation on UniProt →

Function. Non-heme iron-containing dioxygenase that catalyzes the stereo-specific peroxidation of free and esterified polyunsaturated fatty acids (PUFAs) generating a spectrum of bioactive lipid mediators. It inserts peroxyl groups at C15 of arachidonate ((5Z,8Z,11Z,14Z)-eicosatetraenoate) producing (15S)-hydroperoxyeicosatetraenoate/(15S)-HPETE. Also peroxidizes linoleate ((9Z,12Z)-octadecadienoate) to 13-hydroperoxyoctadecadienoate/13-HPODE. Oxygenates arachidonyl derivatives such as 2-arachidonoylglycerol (2-AG) leading to the production and extracellular release of 15-hydroxyeicosatetraenoyl glycerol (15-HETE-G) that acts as a peroxisome proliferator-activated receptor alpha agonist. Has the ability to efficiently class-switch ALOX5 pro-inflammatory mediators into anti-inflammatory intermediates. Participates in the sequential oxidations of DHA ((4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoate) to generate specialized pro-resolving mediators (SPMs) resolvin D5 ((7S,17S)-diHPDHA), which can actively down-regulate the immune response and have anti-aggregation properties with platelets. In addition to free PUFAs hydrolyzed from phospholipids, it directly oxidizes PUFAs esterified to membrane-bound phospholipids. Has no detectable 8S-lipoxygenase activity on arachidonate but reacts with (8S)-HPETE to produce (8S,15S)-diHPETE. May regulate progression through the cell cycle and cell proliferation. May also regulate cytokine secretion by macrophages and therefore play a role in the immune response. May also regulate macrophage differentiation into proatherogenic foam cells. Does not convert arachidonic acid to 15S-hydroperoxyeicosatetraenoic acid/(15S)-HPETE.

Subcellular location. Nucleus Cytoplasm. Cytosol. Cell membrane. Cytoplasm. Cytoskeleton. Membrane. Cell junction. Adherens junction. Focal adhesion.

Tissue specificity. Expressed in hair, prostate, lung, ovary, lymph node, spinal cord and cornea.

Cofactor. Binds 1 Fe cation per subunit.

Domain organisation. The PLAT domain can bind calcium ions; this promotes association with membranes.

Induction. Up-regulated by UV-irradiation.

Pathway. Lipid metabolism; hydroperoxy eicosatetraenoic acid biosynthesis.

Similarity. Belongs to the lipoxygenase family.

Isoforms (4)

UniProt IDNamesCanonical?
O15296-1A, 15-LOb1yes
O15296-2B, 15-LOX2sv-b
O15296-3C, 15-LOX2sv-c
O15296-4D, 15-LOX2sv-a, 15-LOb2

RefSeq proteins (3): NP_001034219, NP_001034220, NP_001132* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR000907LipOaseFamily
IPR001024PLAT/LH2_domDomain
IPR001885LipOase_mmlFamily
IPR013819LipOase_CDomain
IPR020833LipOase_Fe_BSBinding_site
IPR020834LipOase_CSConserved_site
IPR036226LipOase_C_sfHomologous_superfamily
IPR036392PLAT/LH2_dom_sfHomologous_superfamily
IPR042062PLAT_LOX_verteDomain

Pfam: PF00305, PF01477

Enzyme classification (BRENDA):

  • EC 1.13.11.33 — arachidonate 15-lipoxygenase (BRENDA: 27 organisms, 136 substrates, 653 inhibitors, 65 Km, 54 kcat entries)

Substrate kinetics (BRENDA)

17 substrates with measured Km, best-characterized 15. Km ranges are aggregated across organisms/conditions.

SubstrateKm (mM)Measurements
ARACHIDONIC ACID0.0025–1.115
O20.0052–4.210
ARACHIDONATE0.0009–0.0138
LINOLEIC ACID0.003–0.07727
5S-HYDROPEROXY-6E,8Z,10E,14Z-EICOSATETRAENOIC AC0.0017–0.0573
5S-HYDROXY-6E,8Z,10E,14Z-EICOSATETRAENOIC ACID0.0017–0.0293
(16(R),5Z,8Z,11Z,14Z)-16-HYDROXYEICOSA-5,8,11,140.0289–0.1362
(16(S),5Z,8Z,11Z,14Z)-16-HYDROXYEICOSA-5,8,11,140.0227–0.02362
(17(R),5Z,8Z,11Z,14Z)-17-HYDROXYEICOSA-5,8,11,140.0368–0.2932
(17(S),5Z,8Z,11Z,14Z)-17-HYDROXYEICOSA-5,8,11,140.0313–0.2362
4Z,7Z,10Z,12E,16Z,19Z-DOCOSAHEXAENOIC ACID0.0009–0.00672
1-LINOLEOYL LYSOPHOSPHATIDIC ACID0.00831
1-LINOLEOYL LYSOPHOSPHATIDYLCHOLINE0.01751
DILINOLEOYL PHOSPHATIDIC ACID0.091
DILINOLEOYL PHOSPHATIDYLCHOLINE0.07171

Catalyzed reactions (Rhea), 12 shown:

  • (5Z,8Z,11Z,14Z)-eicosatetraenoate + O2 = (15S)-hydroperoxy-(5Z,8Z,11Z,13E)-eicosatetraenoate (RHEA:16869)
  • (5Z,8Z,11Z,14Z)-eicosatetraenoate + O2 = 15-hydroperoxy-(5Z,8Z,11Z,13E)-eicosatetraenoate (RHEA:48832)
  • (5Z,8Z,11Z,14Z)-eicosatetraenoate + O2 = 5-hydroperoxy-(6E,8Z,11Z,14Z)-eicosatetraenoate (RHEA:48844)
  • (9Z,12Z)-octadecadienoate + O2 = 13-hydroperoxy-(9Z,11E)-octadecadienoate (RHEA:48848)
  • N-(5Z,8Z,11Z,14Z)-eicosatetraenoyl-taurine + O2 = N-(15S)-hydroperoxy-(5Z,8Z,11Z,13E)-eicosatetraenoyl-taurine (RHEA:50156)
  • N-(5Z,8Z,11Z,14Z)-eicosatetraenoyl-gamma-aminobutanoate + O2 = N-(15S)-hydroperoxy-(5Z,8Z,11Z,13E)-eicosatetraenoyl-gamma-aminobutanoate (RHEA:50180)
  • N-(5Z,8Z,11Z,14Z)-eicosatetraenoyl-L-alanine + O2 = N-(15S)-hydroperoxy-(5Z,8Z,11Z,13E)-eicosatetraenoyl-alanine (RHEA:50184)
  • N-(5Z,8Z,11Z,14Z)-eicosatetraenoyl-glycine + O2 = N-(15S)-hydroperoxy-(5Z,8Z,11Z,13E)-eicosatetraenoyl-glycine (RHEA:50188)
  • (8S)-hydroperoxy-(5Z,9E,11Z,14Z)-eicosatetraenoate + O2 = (8S,15S)-dihydroperoxy-(5Z,9E,11Z,13E)-eicosatetraenoate (RHEA:50932)
  • 2-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-glycerol + O2 = 2-[15(S)-hydroperoxy-(5Z,8Z,11Z,13E)-eicosatetraenoyl]-glycerol (RHEA:53332)
  • (5S)-hydroperoxy-(6E,8Z,11Z,14Z)-eicosatetraenoate + O2 = (5S,15S)-dihydroperoxy-(6E,8Z,11Z,13E)-eicosatetraenoate (RHEA:53652)
  • (5S,6R)-dihydroxy-(7E,9E,11Z,14Z)-eicosatetraenoate + O2 = (5S,6R)-dihydroxy-(15S)-hydroperoxy-(7E,9E,11Z,13E)-eicosatetraenoate (RHEA:53656)

UniProt features (85 total): helix 31, strand 16, binding site 12, turn 8, mutagenesis site 5, splice variant 4, sequence variant 4, domain 2, sequence conflict 2, chain 1

Structure

Experimental structures (PDB)

3 structures.

PDBMethodResolution (Å)
8VIYX-RAY DIFFRACTION2.34
7LAFX-RAY DIFFRACTION2.44
4NREX-RAY DIFFRACTION2.63

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-O15296-F195.240.89

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Ligand- & substrate-binding residues (12): 86; 373; 378; 553; 676; 15; 17; 39; 40; 42; 44; 85

Mutagenesis-validated functional residues (5):

PositionPhenotype
39abolishes calcium-dependent association with membranes; when associated with a-44 and a-85.
44abolishes calcium-dependent association with membranes; when associated with a-39 and a-85.
85abolishes calcium-dependent association with membranes; when associated with a-39 and a-44.
602no effect on the stereoselectivity of the oxygenation reaction. completely changes the stereoselectivity of the oxygenat
603changes the stereoselectivity of the oxygenation reaction. completely changes the stereoselectivity of the oxygenation r

Function

Pathways and Gene Ontology

Reactome pathways

5 pathways

IDPathway
R-HSA-2142770Synthesis of 15-eicosatetraenoic acid derivatives
R-HSA-1430728Metabolism
R-HSA-2142753Arachidonate metabolism
R-HSA-556833Metabolism of lipids
R-HSA-8978868Fatty acid metabolism

MSigDB gene sets: 215 (showing top): GOBP_POSITIVE_REGULATION_OF_EPITHELIAL_CELL_DIFFERENTIATION, GOBP_LIPID_MODIFICATION, MODULE_93, GOBP_EPITHELIUM_DEVELOPMENT, GOBP_PHOSPHOLIPID_METABOLIC_PROCESS, GOBP_POSITIVE_REGULATION_OF_KERATINOCYTE_DIFFERENTIATION, GOBP_REGULATION_OF_EPIDERMIS_DEVELOPMENT, GOBP_GROWTH, GOBP_ORGANOPHOSPHATE_METABOLIC_PROCESS, GOBP_POSITIVE_REGULATION_OF_CYTOKINE_PRODUCTION, GOBP_LONG_CHAIN_FATTY_ACID_METABOLIC_PROCESS, GOBP_MONOCARBOXYLIC_ACID_METABOLIC_PROCESS, GOBP_POSITIVE_REGULATION_OF_MACROPHAGE_DERIVED_FOAM_CELL_DIFFERENTIATION, CHANDRAN_METASTASIS_DN, GOBP_ORGANIC_ACID_BIOSYNTHETIC_PROCESS

GO Biological Process (21): lipid metabolic process (GO:0006629), phospholipid metabolic process (GO:0006644), apoptotic process (GO:0006915), negative regulation of cell population proliferation (GO:0008285), positive regulation of macrophage derived foam cell differentiation (GO:0010744), arachidonate metabolic process (GO:0019369), lipoxygenase pathway (GO:0019372), negative regulation of cell migration (GO:0030336), prostate gland development (GO:0030850), regulation of epithelial cell differentiation (GO:0030856), positive regulation of chemokine production (GO:0032722), lipid oxidation (GO:0034440), positive regulation of peroxisome proliferator activated receptor signaling pathway (GO:0035360), linoleic acid metabolic process (GO:0043651), positive regulation of keratinocyte differentiation (GO:0045618), negative regulation of cell cycle (GO:0045786), negative regulation of growth (GO:0045926), hepoxilin biosynthetic process (GO:0051122), endocannabinoid signaling pathway (GO:0071926), cannabinoid biosynthetic process (GO:1901696), lipoxin A4 biosynthetic process (GO:2001303)

GO Molecular Function (12): iron ion binding (GO:0005506), calcium ion binding (GO:0005509), lipid binding (GO:0008289), linoleate 13S-lipoxygenase activity (GO:0016165), arachidonate 8(S)-lipoxygenase activity (GO:0036403), arachidonate 15-lipoxygenase activity (GO:0050473), linoleate 9S-lipoxygenase activity (GO:1990136), protein binding (GO:0005515), oxidoreductase activity (GO:0016491), oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702), metal ion binding (GO:0046872), dioxygenase activity (GO:0051213)

GO Cellular Component (10): nucleus (GO:0005634), cytosol (GO:0005829), cytoskeleton (GO:0005856), plasma membrane (GO:0005886), adherens junction (GO:0005912), focal adhesion (GO:0005925), membrane (GO:0016020), extracellular exosome (GO:0070062), cytoplasm (GO:0005737), anchoring junction (GO:0070161)

Reactome top-level categories

Rollup of top-4 pathways:

CategoryPathways
Arachidonate metabolism1
Fatty acid metabolism1
Metabolism1
Metabolism of lipids1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen4
cellular anatomical structure3
negative regulation of cellular process2
long-chain fatty acid metabolic process2
icosanoid metabolic process2
unsaturated fatty acid metabolic process2
olefinic compound metabolic process2
binding2
primary metabolic process1
lipid metabolic process1
organophosphate metabolic process1
programmed cell death1
apoptotic signaling pathway1
execution phase of apoptosis1
cell population proliferation1
regulation of cell population proliferation1
macrophage derived foam cell differentiation1
regulation of macrophage derived foam cell differentiation1
positive regulation of cell differentiation1
fatty acid metabolic process1
cell migration1
regulation of cell migration1
negative regulation of cell motility1
urogenital system development1
reproductive structure development1
gland development1
epithelial cell differentiation1
regulation of cell differentiation1
regulation of multicellular organismal development1
positive regulation of cytokine production1
chemokine production1
regulation of chemokine production1
lipid modification1
peroxisome proliferator activated receptor signaling pathway1
regulation of peroxisome proliferator activated receptor signaling pathway1
positive regulation of intracellular signal transduction1
keratinocyte differentiation1
positive regulation of epidermal cell differentiation1
regulation of keratinocyte differentiation1
positive regulation of multicellular organismal process1

Protein interactions and networks

STRING

894 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
ALOX15BLOXP28300817
ALOX15BPEBP1P30086648
ALOX15BALOX5APP20292491
ALOX15BACSL4O60488447
ALOX15BLTA4HP09960446
ALOX15BGPX4P36969433
ALOX15BPTGS2P35354424
ALOX15BLPCAT3Q6P1A2419
ALOX15BOLR1P78380415
ALOX15BPTGS1P23219406
ALOX15BPPARGP37231373
ALOX15BGGT1P19440358
ALOX15BLTC4SQ16873357
ALOX15BSPRR2EP22531352
ALOX15BPLA2G4AP47712350

IntAct

27 interactions, top by confidence:

ABTypeScore
ALOX15BVMA22psi-mi:“MI:0915”(physical association)0.560
ALOX15BCTAG1Apsi-mi:“MI:0915”(physical association)0.560
ALOX15BTRIM21psi-mi:“MI:0915”(physical association)0.560
ALOX15BKCNF1psi-mi:“MI:0915”(physical association)0.560
ALOX15BTRAIPpsi-mi:“MI:0915”(physical association)0.560
ALOX15BRARApsi-mi:“MI:0915”(physical association)0.560
NPPAA2ML1psi-mi:“MI:0914”(association)0.530
PTDSS1IGLL5psi-mi:“MI:0914”(association)0.350
FERMT2ALOX15Bpsi-mi:“MI:0914”(association)0.350
ALOX15BTAF5Lpsi-mi:“MI:0914”(association)0.350
CCR1UBA6psi-mi:“MI:0914”(association)0.350
SH2D3AA2ML1psi-mi:“MI:0914”(association)0.350
PINK1A2ML1psi-mi:“MI:0914”(association)0.350
FOXN3IGLL5psi-mi:“MI:0914”(association)0.350
ALOX15BCTAG1Apsi-mi:“MI:0915”(physical association)0.000
ALOX15BTRIM21psi-mi:“MI:0915”(physical association)0.000
ALOX15BKCNF1psi-mi:“MI:0915”(physical association)0.000
ALOX15BTRAIPpsi-mi:“MI:0915”(physical association)0.000
ALOX15BRARApsi-mi:“MI:0915”(physical association)0.000

BioGRID (30): KBTBD2 (Affinity Capture-MS), RPH3A (Affinity Capture-MS), ALOX15B (Affinity Capture-MS), TAF5L (Affinity Capture-MS), KIF3A (Affinity Capture-MS), ALOX15B (Two-hybrid), ALOX15B (Two-hybrid), ALOX15B (Two-hybrid), ALOX15B (Two-hybrid), TRAIP (Two-hybrid), CTAG1B (Two-hybrid), CTAG1A (Two-hybrid), ALOX15B (Affinity Capture-MS), TAF5L (Affinity Capture-MS), ALOX15B (Affinity Capture-MS)

ESM2 similar proteins: A6H603, D3ZBP4, D3ZKX9, D3ZQF9, F1LQ70, O00329, O00411, O15296, O35936, O43548, O70582, O75342, O95932, P09917, P0C869, P0C871, P12527, P12530, P16050, P16452, P16469, P18054, P27479, P39654, P39655, P48999, P49222, P51399, P52630, P55249, Q02759, Q149M9, Q2KMM4, Q2TB18, Q4R7D0, Q50L43, Q5R5N9, Q5RBE8, Q5RCY5, Q68DD2

Diamond homologs: C8YR32, D3ZKX9, D3ZQF9, F1LQ70, O15296, O16025, O22507, O22508, O24371, O24379, O35936, O70582, O75342, P08170, P09186, P09439, P09917, P09918, P12527, P12530, P16050, P16469, P18054, P24095, P27479, P27480, P27481, P37831, P38414, P38417, P38418, P39654, P39655, P48999, P51399, P55249, Q02759, Q2KMM4, Q41238, Q43190

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

137 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic0
Uncertain significance114
Likely benign10
Benign2

Top pathogenic / likely-pathogenic (0)

SpliceAI

2251 predictions. Top by Δscore:

VariantEffectΔscore
17:8039298:GCGCT:Gdonor_gain1.0000
17:8039300:GCT:Gdonor_gain1.0000
17:8039303:G:GGdonor_gain1.0000
17:8039307:G:GGdonor_gain1.0000
17:8039975:GAT:Gdonor_gain1.0000
17:8039984:G:GGdonor_gain1.0000
17:8039989:G:GTdonor_gain1.0000
17:8039992:G:GTdonor_gain1.0000
17:8042485:GCTC:Gdonor_gain1.0000
17:8042490:GC:Gdonor_gain1.0000
17:8042492:G:GGdonor_gain1.0000
17:8042497:G:GTdonor_gain1.0000
17:8042881:GCTG:Gdonor_gain1.0000
17:8044818:A:AGacceptor_gain1.0000
17:8044819:C:Gacceptor_gain1.0000
17:8044824:TGCA:Tacceptor_loss1.0000
17:8044824:TGCAG:Tacceptor_gain1.0000
17:8044825:GCAG:Gacceptor_loss1.0000
17:8044826:CA:Cacceptor_loss1.0000
17:8044826:CAG:Cacceptor_gain1.0000
17:8044827:A:AGacceptor_gain1.0000
17:8044827:AGA:Aacceptor_gain1.0000
17:8044828:G:GAacceptor_gain1.0000
17:8044828:G:GCacceptor_loss1.0000
17:8044828:GA:Gacceptor_gain1.0000
17:8044828:GAG:Gacceptor_gain1.0000
17:8044828:GAGC:Gacceptor_gain1.0000
17:8044990:GC:Gdonor_gain1.0000
17:8045000:AGG:Adonor_loss1.0000
17:8045002:G:Tdonor_loss1.0000

AlphaMissense

4402 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
17:8045557:G:CK357N0.991
17:8045557:G:TK357N0.991
17:8045568:G:CR361P0.977
17:8045553:C:AA356D0.976
17:8046717:G:CR417P0.976
17:8045573:G:CA363P0.974
17:8045516:T:CF344L0.971
17:8045518:C:AF344L0.971
17:8045518:C:GF344L0.971
17:8045543:T:AW353R0.970
17:8045543:T:CW353R0.970
17:8045545:G:CW353C0.970
17:8045545:G:TW353C0.970
17:8045579:T:CF365L0.970
17:8045581:C:AF365L0.970
17:8045581:C:GF365L0.970
17:8042827:T:AW207R0.968
17:8042827:T:CW207R0.968
17:8044940:T:AV263D0.968
17:8045561:T:AW359R0.968
17:8045561:T:CW359R0.968
17:8045380:T:AI331N0.963
17:8047760:T:AW566R0.963
17:8047760:T:CW566R0.963
17:8045250:T:CF288L0.961
17:8045252:C:AF288L0.961
17:8045252:C:GF288L0.961
17:8044864:T:CF238L0.958
17:8044866:C:AF238L0.958
17:8044866:C:GF238L0.958

dbSNP variants (sampled 300 via entrez): RS1000478509 (17:8046741 AG>A), RS1001108602 (17:8039464 C>T), RS1001268361 (17:8042574 C>A), RS1001547213 (17:8041602 A>G), RS1001561370 (17:8039217 A>G), RS1001598704 (17:8047161 G>A,T), RS1001937318 (17:8046171 C>T), RS1002162066 (17:8038143 C>CT), RS1002214627 (17:8037865 A>C), RS1002221650 (17:8044119 G>A), RS1002228756 (17:8041897 T>A,C), RS1002282581 (17:8040269 C>T), RS1002322714 (17:8043805 A>G), RS1002370889 (17:8049172 C>T), RS1002515079 (17:8040701 T>G)

Disease associations

OMIM: gene MIM:603697 | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

4 associations (top):

StudyTraitp-value
GCST002541_111Menarche (age at onset)2.000000e-08
GCST006585_2236Blood protein levels2.000000e-09
GCST009391_1976Metabolite levels5.000000e-06
GCST010463_25Childhood ALL/LBL (acute lymphoblastic leukemia/lymphoblastic lymphoma) treatment-related venous thromboembolism4.000000e-07

EFO canonical traits (2, from GWAS)

EFO IDTrait name
EFO:0004703age at menarche
EFO:0008534tryptophan measurement

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL2457 (SINGLE PROTEIN)

Molecules with ChEMBL bioactivity

1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 1,792 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

MoleculeNamePhasePatents
CHEMBL1200596CHLOROXINE41,792

PharmGKB: 1 entry (VIP=true, CPIC=false)

GtoPdb / IUPHAR curated pharmacology

(IUPHAR/BPS Guide to Pharmacology — expert-curated)

Target class: enzyme — Lipoxygenases

Most potent curated ligand interactions (2 total), top 2:

LigandActionAffinityParameter
compound 21n [PMID: 17656086]Inhibition7.29pIC50
MLS000536924Inhibition5.6pKi

ChEMBL bioactivities

16 potent at pChembl≥5 of 28 total, top 14 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
7.29IC5051nMCHEMBL235920
6.83IC50147nMCHEMBL399821
6.47IC50340nMCHEMBL1390514
6.40IC50402nMCHEMBL392977
6.36IC50433nMCHEMBL391659
6.28IC50530nMCHEMBL1520238
6.22EC50600nMCHEMBL1452107
6.12EC50750nMCHEMBL1390514
6.06IC50870nMCHEMBL1352020
5.89EC501300nMCHEMBL1352020
5.58IC502600nMCHEMBL1489870
5.51IC503100nMCHEMBL1452107
5.50IC503130nMCHEMBL401246
5.08IC508300nMCHEMBL239893

PubChem BioAssay actives

15 with measured affinity, of 211 total; 11 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
5-[2-[[ethyl-[(3R)-1-[1-(4-fluorophenyl)ethyl]pyrrolidin-3-yl]sulfamoyl]amino]ethyl]-4-(4-methoxyphenyl)-2-thiophen-2-yl-1H-imidazole300785: Inhibition of human recombinant 15-lipoxygenase over-expressed in CHO cellsic500.0510uM
N-[2-[4-(4-methoxyphenyl)-2-thiophen-2-yl-1H-imidazol-5-yl]ethyl]-4-pentylbenzenesulfonamide300785: Inhibition of human recombinant 15-lipoxygenase over-expressed in CHO cellsic500.1470uM
1-phenyl-2-[[4-(trifluoromethyl)phenyl]methylsulfanyl]imidazole1766300: Inhibition of human 15-LOX-2 assessed as enzymatic rate using arachidonic acid as substrate by UV/Vis spectrophotometric analysisic500.3400uM
N-[2-[4-(4-methoxyphenyl)-2-phenyl-1H-imidazol-5-yl]ethyl]-4-pentylbenzenesulfonamide300785: Inhibition of human recombinant 15-lipoxygenase over-expressed in CHO cellsic500.4020uM
4-(3,4-dichlorophenyl)-N-[2-[4-(4-methoxyphenyl)-2-thiophen-2-yl-1H-imidazol-5-yl]ethyl]piperazine-1-sulfonamide300785: Inhibition of human recombinant 15-lipoxygenase over-expressed in CHO cellsic500.4330uM
2-[(4-bromophenyl)methylsulfanyl]-1-phenylimidazole1766300: Inhibition of human 15-LOX-2 assessed as enzymatic rate using arachidonic acid as substrate by UV/Vis spectrophotometric analysisic500.5300uM
3-[(4-methylphenyl)methylsulfanyl]-1-phenyl-1,2,4-triazole1766313: Inhibition of human 15-LOX-2 expressed in HEK293T cells assessed as a reduction in 15-HETE production using arachidonic acid as substrate incubated for 20 minsec500.6000uM
2-[(4-ethylphenyl)methylsulfanyl]-1-phenylimidazole1766300: Inhibition of human 15-LOX-2 assessed as enzymatic rate using arachidonic acid as substrate by UV/Vis spectrophotometric analysisic500.8700uM
2-(4-chlorophenyl)-5-cyclohexyl-1,3,4-oxadiazole1766300: Inhibition of human 15-LOX-2 assessed as enzymatic rate using arachidonic acid as substrate by UV/Vis spectrophotometric analysisic502.6000uM
5-[2-[[[(3R)-1-benzylpyrrolidin-3-yl]-methylsulfamoyl]amino]ethyl]-4-(4-methoxyphenyl)-2-phenyl-1H-imidazole300785: Inhibition of human recombinant 15-lipoxygenase over-expressed in CHO cellsic503.1300uM
3-(3-methylphenyl)-3,4-dihydro-2H-chromene-6,7-diol1801111: IC50 Assay from Article 10.1111/cbdd.12469: “Enzymatic Studies of Isoflavonoids as Selective and Potent Inhibitors of Human Leukocyte 5-Lipo-Oxygenase.”ic508.3000uM

CTD chemical–gene interactions

30 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
sodium arsenitedecreases expression, affects splicing2
Benzo(a)pyreneincreases expression, increases methylation2
Progesteroneaffects cotreatment, increases expression2
Tetrachlorodibenzodioxindecreases expression, increases expression2
lead acetatedecreases expression1
pyrogallol 1,3-dimethyl etheraffects localization, decreases expression, increases expression, affects cotreatment1
cupric chloridedecreases expression1
rofecoxibaffects expression1
entinostatincreases expression1
bisphenol Saffects cotreatment, increases methylation1
Resveratrolaffects cotreatment, decreases expression1
Fulvestrantaffects cotreatment, increases methylation1
Calcitriolaffects cotreatment, increases expression1
Carmustinedecreases expression1
Dichlorodiphenyl Dichloroethylenedecreases expression1
Estradiolaffects cotreatment, increases expression1
Furaldehydeaffects cotreatment, affects localization, decreases expression1
Nickeldecreases expression1
Plant Extractsaffects cotreatment, decreases expression1
Sodium Chlorideaffects cotreatment, affects localization, decreases expression, increases expression1
Sodium Fluorideincreases expression1
Testosteroneaffects cotreatment, increases expression1
Thiramdecreases expression1
Tobacco Smoke Pollutionaffects expression1
Triclosanincreases expression1
7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxideincreases expression1
Isotretinoindecreases expression1
Cadmium Chloridedecreases expression1
Lactic Aciddecreases expression1
Particulate Matterincreases expression1

ChEMBL screening assays

34 unique, capped per target: 29 binding, 3 functional, 2 admet

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL1273493BindingInhibition of human N-terminal His6-tagged epithelial 15-lipoxygenase-2 after 15 mins by UV-vis spectrophotometer analysisDiscovery of potent and selective inhibitors of human reticulocyte 15-lipoxygenase-1. — J Med Chem
CHEMBL1613800FunctionalPUBCHEM_BIOASSAY: qHTS Assay for Inhibitors of 15-hLO-2 (15-human lipoxygenase 2). (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID2312, AID2537, AID2702]PubChem BioAssay data set
CHEMBL4825400ADMETPseudo-peroxidase activity in human 15-LOX-2 assessed as redox activity of the compound by measuring degradation of 13-HpODE at 20 uM by UV/Vis pseudo-peroxidase assayKinetic and structural investigations of novel inhibitors of human epithelial 15-lipoxygenase-2. — Bioorg Med Chem

Cellosaurus cell lines

2 cell lines: 2 cancer cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_C7ZTHAP1 ALOX15B (-) 1Cancer cell lineMale
CVCL_C7ZUHAP1 ALOX15B (-) 2Cancer cell lineMale

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.

No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.