AMIGO3
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Summary
AMIGO3 (adhesion molecule with Ig like domain 3, HGNC:24075) is a protein-coding gene on chromosome 3p21.31, encoding Amphoterin-induced protein 3 (Q86WK7). May mediate heterophilic cell-cell interaction.
Predicted to be involved in brain development; heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules; and positive regulation of synapse assembly. Predicted to be active in membrane.
Source: NCBI Gene 386724 — RefSeq curated summary.
At a glance
- GWAS associations: 12
- Clinical variants (ClinVar): 99 total — 3 pathogenic
- MANE Select transcript:
NM_198722
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:24075 |
| Approved symbol | AMIGO3 |
| Name | adhesion molecule with Ig like domain 3 |
| Location | 3p21.31 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000176020 |
| Ensembl biotype | protein_coding |
| OMIM | 615691 |
| Entrez | 386724 |
Gene structure
Transcript identifiers
Ensembl transcripts: 1 — 1 protein_coding
ENST00000320431
RefSeq mRNA: 1 — MANE Select: NM_198722
NM_198722
CCDS: CCDS33759
Canonical transcript exons
ENST00000320431 — 1 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001241276 | 49716829 | 49719684 |
Expression profiles
Bgee: expression breadth ubiquitous, 129 present calls, max score 81.25.
FANTOM5 (CAGE): breadth broad, TPM avg 1.6192 / max 81.5612, expressed in 603 samples.
FANTOM5 promoters (1 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 42270 | 1.6192 | 603 |
Top tissues by expression
131 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 81.25 | silver quality |
| hindlimb stylopod muscle | UBERON:0004252 | 69.71 | gold quality |
| stromal cell of endometrium | CL:0002255 | 67.92 | gold quality |
| adenohypophysis | UBERON:0002196 | 67.28 | gold quality |
| pituitary gland | UBERON:0000007 | 67.16 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 66.25 | gold quality |
| granulocyte | CL:0000094 | 66.08 | gold quality |
| skin of abdomen | UBERON:0001416 | 65.22 | gold quality |
| skin of leg | UBERON:0001511 | 65.17 | gold quality |
| zone of skin | UBERON:0000014 | 64.86 | gold quality |
| right lobe of liver | UBERON:0001114 | 64.77 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 64.22 | gold quality |
| mucosa of stomach | UBERON:0001199 | 63.10 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 62.72 | gold quality |
| sural nerve | UBERON:0015488 | 62.48 | silver quality |
| left adrenal gland | UBERON:0001234 | 62.13 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 62.13 | gold quality |
| cerebellum | UBERON:0002037 | 62.05 | gold quality |
| cerebellar cortex | UBERON:0002129 | 61.92 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 61.78 | gold quality |
| ventricular zone | UBERON:0003053 | 61.57 | gold quality |
| blood | UBERON:0000178 | 61.49 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 61.48 | gold quality |
| right adrenal gland | UBERON:0001233 | 60.99 | gold quality |
| muscle of leg | UBERON:0001383 | 60.91 | gold quality |
| left uterine tube | UBERON:0001303 | 60.76 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 60.57 | gold quality |
| muscle tissue | UBERON:0002385 | 60.39 | gold quality |
| gastrocnemius | UBERON:0001388 | 59.53 | gold quality |
| esophagus mucosa | UBERON:0002469 | 59.50 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 0.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | no | 0.45 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
26 targeting AMIGO3, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-589-3P | 99.91 | 69.62 | 2088 |
| HSA-MIR-4447 | 99.85 | 67.81 | 2900 |
| HSA-MIR-3059-5P | 99.70 | 69.93 | 2491 |
| HSA-MIR-4743-3P | 99.62 | 68.12 | 2095 |
| HSA-MIR-1260A | 99.61 | 66.67 | 1098 |
| HSA-MIR-1260B | 99.61 | 66.67 | 1098 |
| HSA-MIR-6836-5P | 99.60 | 65.62 | 1538 |
| HSA-MIR-6132 | 99.60 | 65.83 | 1554 |
| HSA-MIR-6081 | 99.48 | 66.07 | 1446 |
| HSA-MIR-6722-3P | 99.45 | 67.62 | 1919 |
| HSA-MIR-3191-5P | 99.24 | 66.52 | 1722 |
| HSA-MIR-6852-5P | 99.17 | 66.69 | 2073 |
| HSA-MIR-6510-5P | 99.14 | 66.59 | 1081 |
| HSA-MIR-661 | 99.09 | 65.94 | 2062 |
| HSA-MIR-6756-3P | 98.94 | 66.79 | 1104 |
| HSA-MIR-3127-3P | 98.94 | 67.34 | 1055 |
| HSA-MIR-6846-5P | 98.81 | 65.86 | 1121 |
| HSA-MIR-518C-5P | 98.53 | 69.20 | 1640 |
| HSA-MIR-4708-5P | 97.77 | 67.82 | 831 |
| HSA-MIR-4761-3P | 96.27 | 66.26 | 524 |
| HSA-MIR-3165 | 96.18 | 66.22 | 473 |
| HSA-MIR-4522 | 95.76 | 66.23 | 742 |
| HSA-MIR-4520-5P | 93.54 | 65.23 | 140 |
| HSA-MIR-4649-5P | 93.02 | 63.85 | 141 |
| HSA-MIR-6729-5P | 93.02 | 62.76 | 138 |
| HSA-MIR-3944-3P | 91.01 | 62.27 | 44 |
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | amigo3 | ENSDARG00000074469 |
| mus_musculus | Amigo3 | ENSMUSG00000032593 |
| rattus_norvegicus | Amigo3 | ENSRNOG00000064183 |
Paralogs (2): AMIGO2 (ENSG00000139211), AMIGO1 (ENSG00000181754)
Protein
Protein identifiers
Amphoterin-induced protein 3 — Q86WK7 (reviewed: Q86WK7)
Alternative names: AMIGO-3, Alivin-3
All UniProt accessions (1): Q86WK7
UniProt curated annotations — full annotation on UniProt →
Function. May mediate heterophilic cell-cell interaction. May contribute to signal transduction through its intracellular domain.
Subunit / interactions. Binds AMIGO1 or AMIGO2.
Subcellular location. Membrane.
Similarity. Belongs to the immunoglobulin superfamily. AMIGO family.
RefSeq proteins (1): NP_942015* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001611 | Leu-rich_rpt | Repeat |
| IPR003591 | Leu-rich_rpt_typical-subtyp | Repeat |
| IPR003598 | Ig_sub2 | Domain |
| IPR003599 | Ig_sub | Domain |
| IPR007110 | Ig-like_dom | Domain |
| IPR013783 | Ig-like_fold | Homologous_superfamily |
| IPR031283 | AMIGO | Family |
| IPR032675 | LRR_dom_sf | Homologous_superfamily |
| IPR036179 | Ig-like_dom_sf | Homologous_superfamily |
Pfam: PF00560, PF13855
UniProt features (26 total): repeat 6, glycosylation site 5, disulfide bond 5, domain 3, topological domain 2, signal peptide 1, chain 1, region of interest 1, compositionally biased region 1, transmembrane region 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q86WK7-F1 | 73.90 | 0.37 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Disulfide bonds (5): 34–40, 38–47, 223–251, 225–273, 300–352
Glycosylation sites (5): 107, 272, 301, 362, 368
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 50 (showing top):
GOBP_HETEROPHILIC_CELL_CELL_ADHESION, GOBP_SYNAPSE_ASSEMBLY, GOBP_POSITIVE_REGULATION_OF_SYNAPSE_ASSEMBLY, GOBP_NEUROGENESIS, GOBP_REGULATION_OF_CELL_JUNCTION_ASSEMBLY, GOBP_REGULATION_OF_NERVOUS_SYSTEM_DEVELOPMENT, GOBP_REGULATION_OF_CELLULAR_COMPONENT_BIOGENESIS, GOBP_POSITIVE_REGULATION_OF_NERVOUS_SYSTEM_DEVELOPMENT, GOBP_NEGATIVE_REGULATION_OF_CELLULAR_COMPONENT_ORGANIZATION, GOBP_CELL_CELL_ADHESION, GOBP_POSITIVE_REGULATION_OF_CELLULAR_COMPONENT_BIOGENESIS, GOBP_REGULATION_OF_CELL_PROJECTION_ORGANIZATION, GOBP_CELL_JUNCTION_ORGANIZATION, GOBP_REGULATION_OF_SYNAPSE_ASSEMBLY, GOBP_POSITIVE_REGULATION_OF_CELL_JUNCTION_ASSEMBLY
GO Biological Process (6): heterophilic cell-cell adhesion (GO:0007157), brain development (GO:0007420), negative regulation of neuron projection development (GO:0010977), positive regulation of synapse assembly (GO:0051965), cell adhesion (GO:0007155), nervous system development (GO:0007399)
GO Molecular Function (2): protein-containing complex binding (GO:0044877), protein binding (GO:0005515)
GO Cellular Component (1): membrane (GO:0016020)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| binding | 2 |
| cell-cell adhesion | 1 |
| central nervous system development | 1 |
| animal organ development | 1 |
| head development | 1 |
| regulation of neuron projection development | 1 |
| neuron projection development | 1 |
| negative regulation of cell projection organization | 1 |
| synapse assembly | 1 |
| positive regulation of nervous system development | 1 |
| regulation of synapse assembly | 1 |
| positive regulation of cell junction assembly | 1 |
| cellular process | 1 |
| system development | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
732 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| AMIGO3 | TMEM131 | Q92545 | 535 |
| AMIGO3 | LINGO1 | Q96FE5 | 490 |
| AMIGO3 | NGFR | P08138 | 476 |
| AMIGO3 | ZDHHC14 | Q8IZN3 | 472 |
| AMIGO3 | OMG | P23515 | 418 |
| AMIGO3 | CYTH2 | Q99418 | 396 |
| AMIGO3 | RTN4 | Q9NQC3 | 395 |
| AMIGO3 | BRSK2 | Q8IWQ3 | 388 |
| AMIGO3 | GPR137 | Q96N19 | 371 |
| AMIGO3 | SH3BP2 | P78314 | 360 |
| AMIGO3 | CLHC1 | Q8NHS4 | 333 |
| AMIGO3 | CDHR4 | A6H8M9 | 327 |
| AMIGO3 | TNFRSF19 | Q9NS68 | 321 |
| AMIGO3 | TRAPPC3L | Q5T215 | 309 |
| AMIGO3 | MAG | P20916 | 306 |
IntAct
11 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| GTPBP8 | HSPD1 | psi-mi:“MI:0914”(association) | 0.530 |
| AMIGO3 | CANX | psi-mi:“MI:0914”(association) | 0.530 |
| FBXO2 | TMEM131L | psi-mi:“MI:0914”(association) | 0.530 |
| PTPRK | MANBA | psi-mi:“MI:0914”(association) | 0.350 |
| CLEC12B | GXYLT2 | psi-mi:“MI:0914”(association) | 0.350 |
| C1orf54 | AGRN | psi-mi:“MI:0914”(association) | 0.350 |
| AMIGO3 | CLGN | psi-mi:“MI:0914”(association) | 0.350 |
| GALNT10 | PLXNA2 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (35): AMIGO3 (Affinity Capture-MS), AMIGO3 (Affinity Capture-MS), C9orf91 (Affinity Capture-MS), GOLPH3 (Affinity Capture-MS), AMIGO3 (Affinity Capture-MS), C1QL4 (Affinity Capture-MS), FBXO2 (Affinity Capture-MS), SEL1L (Affinity Capture-MS), UFSP2 (Affinity Capture-MS), CANX (Affinity Capture-MS), SLC22A18 (Affinity Capture-MS), OMA1 (Affinity Capture-MS), ZDHHC17 (Affinity Capture-MS), AMIGO3 (Affinity Capture-Western), AMIGO3 (Affinity Capture-Western)
ESM2 similar proteins: A3KNN3, A4IFA6, A6H789, A6H793, A6NDA9, A8WHP9, E7FE13, O08644, O08742, O08770, O14498, O15197, P0C0K6, P0C0K7, P14616, P14617, P21709, P54760, P54761, P59034, P59035, Q149C3, Q3ZBI5, Q5BK65, Q5JZY3, Q5NVQ6, Q5R7M3, Q60750, Q62178, Q64716, Q6GU68, Q6P7C4, Q6PFC5, Q6UY18, Q80ZD5, Q86SJ2, Q86WK7, Q86YC3, Q8BGX3, Q8BMT4
Diamond homologs: A6H789, D3ZTV3, G5EFX6, O02678, O15335, O43155, O46377, O46378, O46379, O46390, O46403, O46542, O55226, O70210, O75093, O75094, O88279, O88280, O94813, P07585, P0DM44, P21793, P21809, P21810, P28653, P28654, P28675, P47853, Q01129, Q27972, Q28888, Q29393, Q3ZBN5, Q5R1V9, Q5RI43, Q7TQ62, Q80TR4, Q86WK7, Q8BLU0, Q8VCH9
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
99 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 3 |
| Likely pathogenic | 0 |
| Uncertain significance | 90 |
| Likely benign | 5 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (3)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1068732 | NC_000003.11:g.(?48507870)(50340407_?)del | Pathogenic |
| 1456135 | NC_000003.11:g.(?49547968)(50685477_?)del | Pathogenic |
| 980510 | GRCh37/hg19 3p21.31-21.2(chr3:48807193-51363558)x1 | Pathogenic |
SpliceAI
424 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 3:49718384:T:TA | acceptor_gain | 0.9800 |
| 3:49719266:TCG:T | donor_gain | 0.9800 |
| 3:49718378:T:TA | acceptor_gain | 0.9700 |
| 3:49718563:GTTGC:G | donor_gain | 0.9600 |
| 3:49718780:T:TA | donor_gain | 0.9600 |
| 3:49718781:G:GA | donor_gain | 0.9600 |
| 3:49719285:C:T | donor_gain | 0.9500 |
| 3:49719621:TTCCC:T | donor_gain | 0.9400 |
| 3:49717343:G:GT | donor_gain | 0.9300 |
| 3:49718156:C:G | donor_gain | 0.9300 |
| 3:49718153:GTGC:G | donor_gain | 0.9200 |
| 3:49718154:TGCT:T | donor_gain | 0.9200 |
| 3:49718155:GCTG:G | donor_gain | 0.9200 |
| 3:49718538:C:T | donor_gain | 0.9200 |
| 3:49718390:AGGCG:A | acceptor_gain | 0.9100 |
| 3:49718391:GGCGG:G | acceptor_gain | 0.9100 |
| 3:49719083:T:TA | donor_gain | 0.9100 |
| 3:49718568:A:AG | donor_gain | 0.8900 |
| 3:49718569:G:GG | donor_gain | 0.8900 |
| 3:49718674:G:GT | donor_gain | 0.8900 |
| 3:49719187:GTC:G | donor_gain | 0.8900 |
| 3:49719188:TCT:T | donor_gain | 0.8900 |
| 3:49718385:G:A | acceptor_gain | 0.8700 |
| 3:49718782:G:GG | donor_gain | 0.8700 |
| 3:49718379:G:A | acceptor_gain | 0.8500 |
| 3:49718386:GTGCA:G | acceptor_loss | 0.8500 |
| 3:49718387:TGCA:T | acceptor_loss | 0.8500 |
| 3:49718388:GCA:G | acceptor_loss | 0.8500 |
| 3:49718389:CAGGC:C | acceptor_loss | 0.8500 |
| 3:49718390:A:T | acceptor_loss | 0.8500 |
AlphaMissense
3238 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 3:49718533:C:A | W311C | 0.993 |
| 3:49718533:C:G | W311C | 0.993 |
| 3:49718098:A:C | F456L | 0.990 |
| 3:49718098:A:T | F456L | 0.990 |
| 3:49718100:A:G | F456L | 0.990 |
| 3:49718456:A:G | L337S | 0.990 |
| 3:49718417:A:C | F350C | 0.989 |
| 3:49718535:A:G | W311R | 0.988 |
| 3:49718535:A:T | W311R | 0.988 |
| 3:49718417:A:G | F350S | 0.983 |
| 3:49718410:G:C | C352W | 0.982 |
| 3:49718295:A:G | C391R | 0.977 |
| 3:49718412:A:G | C352R | 0.977 |
| 3:49718411:C:G | C352S | 0.976 |
| 3:49718412:A:T | C352S | 0.976 |
| 3:49718286:C:G | G394R | 0.975 |
| 3:49718099:A:C | F456C | 0.974 |
| 3:49718766:A:G | W234R | 0.974 |
| 3:49718766:A:T | W234R | 0.974 |
| 3:49718416:G:C | F350L | 0.972 |
| 3:49718416:G:T | F350L | 0.972 |
| 3:49718418:A:G | F350L | 0.972 |
| 3:49718411:C:T | C352Y | 0.970 |
| 3:49718567:C:T | C300Y | 0.966 |
| 3:49718764:C:A | W234C | 0.966 |
| 3:49718764:C:G | W234C | 0.966 |
| 3:49718809:G:C | N219K | 0.965 |
| 3:49718809:G:T | N219K | 0.965 |
| 3:49718285:C:T | G394D | 0.963 |
| 3:49718567:C:G | C300S | 0.963 |
dbSNP variants (sampled 300 via entrez): RS1000783242 (3:49720182 G>A,C), RS1000848134 (3:49721336 C>T), RS1001399602 (3:49721226 T>G), RS1002239690 (3:49719828 A>G), RS1002489068 (3:49716617 T>G), RS1003244818 (3:49718796 C>A), RS1003912296 (3:49716746 G>A,C), RS1003983678 (3:49716946 AC>A,ACC), RS1005096711 (3:49720342 G>A,T), RS1008348412 (3:49721374 A>G), RS1008613216 (3:49720158 A>C,G), RS1009054923 (3:49719666 C>G,T), RS1009101756 (3:49719866 C>G,T), RS1009222175 (3:49716640 G>A), RS1009607759 (3:49720374 T>G)
Disease associations
OMIM: gene MIM:615691 | disease phenotypes: MIM:192315, MIM:225750, MIM:610448
GenCC curated gene-disease
Mondo (4): retinal vasculopathy with cerebral leukoencephalopathy and systemic manifestations (MONDO:0008641), Aicardi-Goutieres syndrome 1 (MONDO:0009165), chilblain lupus 1 (MONDO:0012500), developmental and epileptic encephalopathy (MONDO:0100620)
Orphanet (5): Retinal vasculopathy with cerebral leukoencephalopathy and systemic manifestations (Orphanet:247691), Cerebroretinal vasculopathy (Orphanet:3421), Aicardi-Goutières syndrome (Orphanet:51), HERNS syndrome (Orphanet:63261), Hereditary vascular retinopathy (Orphanet:71291)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
12 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000964_6 | Ulcerative colitis | 2.000000e-17 |
| GCST006920_7 | Regular attendance at a gym or sports club | 6.000000e-10 |
| GCST006922_9 | Regular attendance at a religious group | 3.000000e-08 |
| GCST007044_11 | Extremely high intelligence | 4.000000e-08 |
| GCST007559_24 | Sleep duration (short sleep) | 3.000000e-08 |
| GCST008357_20 | Mood instability | 4.000000e-11 |
| GCST008512_6 | Multisite chronic pain | 8.000000e-10 |
| GCST010698_80 | Subcortical volume (min-P) | 3.000000e-24 |
| GCST010699_110 | Brain morphology (min-P) | 4.000000e-08 |
| GCST010701_52 | Cortical surface area (MOSTest) | 1.000000e-16 |
| GCST010702_36 | Subcortical volume (MOSTest) | 1.000000e-10 |
| GCST010703_262 | Brain morphology (MOSTest) | 2.000000e-13 |
EFO canonical traits (5, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0009592 | social interaction measurement |
| EFO:0004337 | intelligence |
| EFO:0008475 | mood instability measurement |
| EFO:0010100 | multisite chronic pain |
| EFO:0004346 | neuroimaging measurement |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| C566007 | Vasculopathy, Retinal, With Cerebral Leukodystrophy (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
22 total (human), top 22 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol F | affects cotreatment, increases expression | 1 |
| bisphenol A | affects cotreatment, increases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| 2-palmitoylglycerol | increases expression | 1 |
| jinfukang | decreases expression, affects cotreatment | 1 |
| (+)-JQ1 compound | increases expression | 1 |
| 2,6-dichloro-(1,4)benzoquinone | increases expression | 1 |
| 2,3,5-trichloro-6-phenyl-(1,4)benzoquinone | decreases expression | 1 |
| Acetaminophen | increases expression | 1 |
| Benzo(a)pyrene | affects methylation, increases methylation | 1 |
| Cisplatin | affects cotreatment, decreases expression | 1 |
| Dexamethasone | affects cotreatment, increases expression | 1 |
| Indomethacin | affects cotreatment, increases expression | 1 |
| Rotenone | decreases expression | 1 |
| Smoke | decreases expression | 1 |
| Tobacco Smoke Pollution | increases expression | 1 |
| Urethane | increases expression | 1 |
| Valproic Acid | increases methylation | 1 |
| 1-Methyl-3-isobutylxanthine | affects cotreatment, increases expression | 1 |
| Okadaic Acid | increases expression | 1 |
| Acrylamide | increases expression | 1 |
| S-Nitrosoglutathione | affects expression | 1 |
Clinical trials (associated diseases)
23 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT03347526 | PHASE3 | SUSPENDED | A Novel Approach to Infantile Spasms |
| NCT03421496 | PHASE3 | TERMINATED | A Study to Assess Cannabidiol Oral Solution With Vigabatrin as Initial Therapy in Participants With Infantile Spasms |
| NCT06719141 | PHASE3 | RECRUITING | A Study to Investigate LP352 in Children and Adults With Developmental and Epileptic Encephalopathies (DEE) |
| NCT06908226 | PHASE3 | ENROLLING_BY_INVITATION | A Study to Investigate LP352 in Children and Adults With Developmental and Epileptic Encephalopathy (DEE) |
| NCT04289467 | PHASE2 | RECRUITING | Treatment of Refractory Infantile Spasms With Fenfluramine |
| NCT05626634 | PHASE2 | COMPLETED | Open-label, Long-term Safety Study of LP352 in Subjects With Developmental and Epileptic Encephalopathy |
| NCT02723448 | PHASE1 | COMPLETED | Aclarubicin for the Treatment of Retinal Vasculopathy With Cerebral Leukodystrophy |
| NCT04727970 | PHASE1 | COMPLETED | Tricaprilin Infantile Spasms Pilot Study |
| NCT06700811 | PHASE1 | RECRUITING | Ketogenic Diet for Prevention of Epileptic Spasms in Infantile Onset Genetic Epilepsies |
| NCT03876444 | PHASE2/PHASE3 | UNKNOWN | Intravenous Methylprednisolone Versus Oral Prednisolone for Infantile Spasms |
| NCT05279118 | PHASE2/PHASE3 | ACTIVE_NOT_RECRUITING | Ketogenic Diet vs ACTH for the Treatment of Children With West Syndrome |
| NCT05364021 | PHASE1/PHASE2 | COMPLETED | Study to Investigate LP352 in Subjects With Developmental and Epileptic Encephalopathies |
| NCT06983158 | PHASE1/PHASE2 | SUSPENDED | A Clinical Trial of CAP-002 Gene Therapy in Pediatric Patients With Syntaxin-Binding Protein 1 (STXBP1) Encephalopathy |
| NCT04937062 | EARLY_PHASE1 | ACTIVE_NOT_RECRUITING | Phenylbutyrate for Monogenetic Developmental and Epileptic Encephalopathy |
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| NCT06149663 | Not specified | AVAILABLE | Intermediate-Size Expanded Access Protocol (EAP) for LP352 |
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| NCT06380192 | Not specified | RECRUITING | Developmental and Epileptic Encephalopathy of Genetic Etiology: Natural History Through Reuse of Clinical Data |
| NCT07396883 | Not specified | NOT_YET_RECRUITING | Developmental and Epileptic Encephalopathies Diagnosed Via Long-read Genome Sequencing |
| NCT07413211 | Not specified | RECRUITING | Genetic Developmental and Epileptic Encephalopathy Natural History Study for Clinical Trial Readiness |
| NCT07531511 | Not specified | NOT_YET_RECRUITING | SLC6A1-NDD Prospective Longitudinal Natural History Study |
| NCT07585643 | Not specified | NOT_YET_RECRUITING | IBIS - Investigating Reliability of BIS and SEDLINE Monitoring in Children With Developmental and Epileptic Encephalopathies (DEE). |
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): Aicardi-Goutieres syndrome 1, chilblain lupus 1, developmental and epileptic encephalopathy, retinal vasculopathy with cerebral leukoencephalopathy and systemic manifestations