ANKHD1-DT

Summary

ANKHD1-DT (ANKHD1 divergent transcript, HGNC:55564) is a long non-coding RNA gene on chromosome 5q31.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55564
Approved symbol	ANKHD1-DT
Name	ANKHD1 divergent transcript
Location	5q31.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249637
Ensembl biotype	lncRNA
Entrez	121232368
RNAcentral	URS00026A24C2 — lncRNA, 921 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 13 — 13 lncRNA

ENST00000507521, ENST00000666403, ENST00000687631, ENST00000786865, ENST00000786866, ENST00000786867, ENST00000786868, ENST00000786869, ENST00000786870, ENST00000786871, ENST00000786872, ENST00000786873, ENST00000786874

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000507521 — 2 exons

Exon	Start	End
ENSE00004163865	140401111	140401663
ENSE00004163876	140370858	140371182

Expression profiles

Bgee: expression breadth ubiquitous, 131 present calls, max score 88.17.

Top tissues by expression

131 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.17	gold quality
skeletal muscle tissue	UBERON:0001134	75.21	gold quality
monocyte	CL:0000576	73.62	gold quality
leukocyte	CL:0000738	73.50	gold quality
left testis	UBERON:0004533	71.48	gold quality
testis	UBERON:0000473	71.26	gold quality
ventricular zone	UBERON:0003053	70.54	gold quality
right testis	UBERON:0004534	70.54	gold quality
granulocyte	CL:0000094	69.44	gold quality
ganglionic eminence	UBERON:0004023	69.25	gold quality
muscle of leg	UBERON:0001383	68.06	gold quality
muscle tissue	UBERON:0002385	67.86	gold quality
mucosa of transverse colon	UBERON:0004991	67.81	gold quality
gastrocnemius	UBERON:0001388	67.23	gold quality
prefrontal cortex	UBERON:0000451	67.22	gold quality
cortex of kidney	UBERON:0001225	66.98	gold quality
tonsil	UBERON:0002372	66.82	gold quality
bone marrow	UBERON:0002371	66.64	gold quality
islet of Langerhans	UBERON:0000006	66.28	gold quality
kidney	UBERON:0002113	66.20	gold quality
adult mammalian kidney	UBERON:0000082	66.19	gold quality
cerebellum	UBERON:0002037	66.08	gold quality
sural nerve	UBERON:0015488	66.07	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	66.05	gold quality
cerebellar cortex	UBERON:0002129	65.98	gold quality
duodenum	UBERON:0002114	65.91	gold quality
cerebellar hemisphere	UBERON:0002245	65.78	gold quality
cortical plate	UBERON:0005343	65.67	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.61	gold quality
apex of heart	UBERON:0002098	65.45	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.49

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.