ANKRD12
gene geneOn this page
Also known as KIAA0874FLJ20053GAC-1ANCO-2
Summary
ANKRD12 (ankyrin repeat domain 12, HGNC:29135) is a protein-coding gene on chromosome 18p11.22, encoding Ankyrin repeat domain-containing protein 12 (Q6UB98). May recruit HDACs to the p160 coactivators/nuclear receptor complex to inhibit ligand-dependent transactivation.
This gene encodes a member of the ankyrin repeats-containing cofactor family. These proteins may inhibit the transcriptional activity of nuclear receptors through the recruitment of histone deacetylases. The encoded protein interacts with p160 coactivators and also represses transcription mediated by the coactivator alteration/deficiency in activation 3 (ADA3). Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene.
Source: NCBI Gene 23253 — RefSeq curated summary.
At a glance
- GWAS associations: 4
- Clinical variants (ClinVar): 290 total — 4 pathogenic
- MANE Select transcript:
NM_015208
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:29135 |
| Approved symbol | ANKRD12 |
| Name | ankyrin repeat domain 12 |
| Location | 18p11.22 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | KIAA0874, FLJ20053, GAC-1, ANCO-2 |
| Ensembl gene | ENSG00000101745 |
| Ensembl biotype | protein_coding |
| OMIM | 610616 |
| Entrez | 23253 |
Gene structure
Transcript identifiers
Ensembl transcripts: 14 — 10 protein_coding, 2 nonsense_mediated_decay, 2 protein_coding_CDS_not_defined
ENST00000262126, ENST00000359158, ENST00000400020, ENST00000540578, ENST00000546007, ENST00000577992, ENST00000581635, ENST00000581758, ENST00000585234, ENST00000917028, ENST00000917029, ENST00000917030, ENST00000917031, ENST00000962123
RefSeq mRNA: 3 — MANE Select: NM_015208
NM_001083625, NM_001204056, NM_015208
CCDS: CCDS11843, CCDS42411
Canonical transcript exons
ENST00000262126 — 13 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000665940 | 9275524 | 9275667 |
| ENSE00000665942 | 9279549 | 9279644 |
| ENSE00001018057 | 9254211 | 9258931 |
| ENSE00001018058 | 9263790 | 9263888 |
| ENSE00001939942 | 9136781 | 9136965 |
| ENSE00001949715 | 9280941 | 9285985 |
| ENSE00003467074 | 9216758 | 9216900 |
| ENSE00003504057 | 9182382 | 9182519 |
| ENSE00003505486 | 9204476 | 9204544 |
| ENSE00003585104 | 9221852 | 9221999 |
| ENSE00003671931 | 9195551 | 9195698 |
| ENSE00003673583 | 9208657 | 9208803 |
| ENSE00003681082 | 9211584 | 9211784 |
Expression profiles
Bgee: expression breadth ubiquitous, 296 present calls, max score 98.59.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 40.6570 / max 4233.3839, expressed in 1799 samples.
FANTOM5 promoters (19 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 169334 | 26.1773 | 1776 |
| 169338 | 2.7570 | 747 |
| 169337 | 1.9882 | 798 |
| 169353 | 1.9861 | 487 |
| 169350 | 1.0713 | 287 |
| 169347 | 1.0564 | 355 |
| 169335 | 1.0092 | 322 |
| 169354 | 0.8581 | 239 |
| 169352 | 0.8483 | 225 |
| 169336 | 0.4950 | 211 |
Top tissues by expression
302 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| calcaneal tendon | UBERON:0003701 | 98.59 | gold quality |
| sural nerve | UBERON:0015488 | 98.12 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 97.16 | gold quality |
| colonic epithelium | UBERON:0000397 | 96.23 | gold quality |
| tendon | UBERON:0000043 | 95.40 | gold quality |
| cortical plate | UBERON:0005343 | 94.77 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 93.98 | gold quality |
| endometrium epithelium | UBERON:0004811 | 93.43 | gold quality |
| bone marrow cell | CL:0002092 | 92.78 | gold quality |
| corpus callosum | UBERON:0002336 | 92.75 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 92.68 | gold quality |
| nasopharynx | UBERON:0001728 | 92.67 | gold quality |
| tonsil | UBERON:0002372 | 92.65 | gold quality |
| monocyte | CL:0000576 | 92.55 | gold quality |
| mononuclear cell | CL:0000842 | 92.41 | gold quality |
| leukocyte | CL:0000738 | 91.72 | gold quality |
| adrenal tissue | UBERON:0018303 | 91.40 | gold quality |
| cerebellar vermis | UBERON:0004720 | 91.00 | gold quality |
| superficial temporal artery | UBERON:0001614 | 90.65 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 89.56 | gold quality |
| jejunal mucosa | UBERON:0000399 | 88.64 | gold quality |
| bone marrow | UBERON:0002371 | 88.48 | gold quality |
| vermiform appendix | UBERON:0001154 | 88.04 | gold quality |
| ganglionic eminence | UBERON:0004023 | 88.03 | gold quality |
| testis | UBERON:0000473 | 87.65 | gold quality |
| lymph node | UBERON:0000029 | 87.61 | gold quality |
| caecum | UBERON:0001153 | 87.48 | gold quality |
| ventricular zone | UBERON:0003053 | 87.38 | gold quality |
| skin of hip | UBERON:0001554 | 87.35 | gold quality |
| cartilage tissue | UBERON:0002418 | 87.20 | gold quality |
Single-cell (SCXA)
Detected in 9 experiment(s), a significant marker in 6.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-124263 | yes | 956.41 |
| E-CURD-122 | yes | 34.60 |
| E-GEOD-93593 | yes | 18.56 |
| E-MTAB-8142 | yes | 15.91 |
| E-CURD-114 | yes | 10.93 |
| E-MTAB-6379 | no | 2618.66 |
| E-CURD-135 | no | 1630.31 |
| E-MTAB-9543 | no | 2.37 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
217 targeting ANKRD12, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-3924 | 100.00 | 72.09 | 2394 |
| HSA-MIR-513A-5P | 100.00 | 69.77 | 2465 |
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-518D-5P | 100.00 | 67.51 | 979 |
| HSA-MIR-518E-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-518F-5P | 100.00 | 67.51 | 979 |
| HSA-MIR-519A-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-519B-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-519C-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-520C-5P | 100.00 | 67.51 | 979 |
| HSA-MIR-522-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-523-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-526A-5P | 100.00 | 67.51 | 979 |
| HSA-MIR-6740-5P | 100.00 | 65.64 | 932 |
| HSA-MIR-9-5P | 100.00 | 72.28 | 2361 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-150-5P | 99.99 | 66.69 | 1976 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-433-3P | 99.98 | 69.37 | 1203 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
| HSA-MIR-4482-3P | 99.98 | 72.50 | 3147 |
| HSA-MIR-25-3P | 99.98 | 74.60 | 1817 |
| HSA-MIR-363-3P | 99.98 | 74.72 | 1821 |
| HSA-MIR-367-3P | 99.98 | 74.83 | 1819 |
| HSA-MIR-32-5P | 99.98 | 75.21 | 1964 |
Literature-anchored findings (GeneRIF, showing 3)
- ADA3 is a newly identified target of the ANCO proteins, which may modulate co-activator function in a transcription-factor-specific manner (PMID:18377363)
- Study revealed that ANKRD12 mRNA were down regulated in CRC tumor tissues and low ANKRD12 expression was correlated with liver metastasis and poor survival of CRC patients. (PMID:23718802)
- These results suggest that circANKRD12 could be involved in a diverse set of functions ranging from cell cycle arrest, tumor invasion to immune modulation. Manipulating the levels of circANKRD12 can regulate molecular functions by altering different signaling pathways and modifies the phenotype of the cells. (PMID:31185953)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ankrd12 | ENSDARG00000052419 |
| mus_musculus | Ankrd12 | ENSMUSG00000034647 |
| rattus_norvegicus | Ankrd12 | ENSRNOG00000012733 |
Protein
Protein identifiers
Ankyrin repeat domain-containing protein 12 — Q6UB98 (reviewed: Q6UB98)
Alternative names: Ankyrin repeat-containing cofactor 2, GAC-1 protein
All UniProt accessions (6): Q6UB98, B5MEA4, F5GYX2, J3KS53, J3KSU9, J3QRX3
UniProt curated annotations — full annotation on UniProt →
Function. May recruit HDACs to the p160 coactivators/nuclear receptor complex to inhibit ligand-dependent transactivation.
Subunit / interactions. Interacts with the PAS region of the p160 coactivators.
Subcellular location. Nucleus.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q6UB98-1 | 1 | yes |
| Q6UB98-2 | 2 |
RefSeq proteins (3): NP_001077094, NP_001190985, NP_056023* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR002110 | Ankyrin_rpt | Repeat |
| IPR036770 | Ankyrin_rpt-contain_sf | Homologous_superfamily |
| IPR053210 | ANKRD12 | Family |
Pfam: PF00023, PF12796
UniProt features (57 total): compositionally biased region 24, region of interest 12, sequence variant 10, modified residue 5, repeat 3, chain 1, splice variant 1, sequence conflict 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q6UB98-F1 | 41.33 | 0.07 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (5): 149, 543, 630, 861, 1401
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 240 (showing top):
MORF_RAGE, AAGCAAT_MIR137, TGCACTT_MIR519C_MIR519B_MIR519A, MODULE_45, IVANOVA_HEMATOPOIESIS_LATE_PROGENITOR, AAAYRNCTG_UNKNOWN, CAGCTG_AP4_Q5, SP1_Q2_01, ATGTTAA_MIR302C, DEURIG_T_CELL_PROLYMPHOCYTIC_LEUKEMIA_DN, USF_01, TGIF_01, MORF_PML, ATCATGA_MIR433, USF_02
GO Biological Process (0):
GO Molecular Function (1): protein binding (GO:0005515)
GO Cellular Component (3): nucleoplasm (GO:0005654), cytosol (GO:0005829), nucleus (GO:0005634)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 2 |
| binding | 1 |
| nuclear lumen | 1 |
| cytoplasm | 1 |
| intracellular membrane-bounded organelle | 1 |
Protein interactions and networks
STRING
1518 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ANKRD12 | LRRC30 | A6NM36 | 559 |
| ANKRD12 | PDE4DIP | Q5VU43 | 430 |
| ANKRD12 | ARHGAP28 | Q9P2N2 | 423 |
| ANKRD12 | SLAIN2 | Q9P270 | 404 |
| ANKRD12 | ZBTB14 | O43829 | 402 |
| ANKRD12 | CDKN2A | P42771 | 395 |
| ANKRD12 | NDUFV2 | P19404 | 388 |
| ANKRD12 | WIZ | O95785 | 380 |
| ANKRD12 | AKAIN1 | P0CW23 | 370 |
| ANKRD12 | MTCL1 | Q9Y4B5 | 358 |
| ANKRD12 | BRCA1 | P38398 | 348 |
| ANKRD12 | WDSUB1 | Q8N9V3 | 331 |
| ANKRD12 | SAMD10 | Q9BYL1 | 330 |
| ANKRD12 | ZNF579 | Q8NAF0 | 324 |
| ANKRD12 | SLAIN1 | Q8ND83 | 323 |
IntAct
22 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| GPS2 | HDAC3 | psi-mi:“MI:0914”(association) | 0.900 |
| HDAC3 | KDM1A | psi-mi:“MI:0914”(association) | 0.650 |
| GPS2 | DCTN6 | psi-mi:“MI:0914”(association) | 0.530 |
| FOXM1 | ANKRD12 | psi-mi:“MI:0217”(phosphorylation reaction) | 0.440 |
| ANKRD12 | CDK6 | psi-mi:“MI:0217”(phosphorylation reaction) | 0.440 |
| CDK4 | ANKRD12 | psi-mi:“MI:0217”(phosphorylation reaction) | 0.440 |
| ANKRD12 | TMTC3 | psi-mi:“MI:0915”(physical association) | 0.400 |
| ANKRD12 | HNRNPD | psi-mi:“MI:0915”(physical association) | 0.400 |
| ANKRD12 | psi-mi:“MI:0915”(physical association) | 0.370 | |
| COPS5 | FBLL1 | psi-mi:“MI:0914”(association) | 0.350 |
| P | psi-mi:“MI:0914”(association) | 0.350 | |
| ANKRD12 | SLIT2 | psi-mi:“MI:0914”(association) | 0.350 |
| ANKRD12 | SGPL1 | psi-mi:“MI:0914”(association) | 0.350 |
| MTNR1A | ANKRD12 | psi-mi:“MI:0915”(physical association) | 0.000 |
| DISC1 | ANKRD12 | psi-mi:“MI:0915”(physical association) | 0.000 |
| ANKRD12 | EEF1D | psi-mi:“MI:0915”(physical association) | 0.000 |
| ANKRD12 | psi-mi:“MI:0915”(physical association) | 0.000 | |
| ANKRD12 | lepA | psi-mi:“MI:0915”(physical association) | 0.000 |
| ANKRD12 | pxpA | psi-mi:“MI:0915”(physical association) | 0.000 |
| ANKRD12 | yopM | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (50): SGPL1 (Affinity Capture-MS), GLIPR2 (Affinity Capture-MS), PHYHIP (Affinity Capture-MS), FYN (Affinity Capture-MS), YES1 (Affinity Capture-MS), ULBP2 (Affinity Capture-MS), SLIT2 (Affinity Capture-MS), HIF1AN (Affinity Capture-MS), GNB4 (Affinity Capture-MS), SGPL1 (Affinity Capture-MS), PHYHIP (Affinity Capture-MS), ULBP2 (Affinity Capture-MS), SLIT2 (Affinity Capture-MS), ANKRD12 (Two-hybrid), ANKRD12 (Affinity Capture-RNA)
ESM2 similar proteins: A0A1I8MUL8, A2AG58, A2AJT9, E9Q309, E9Q4F7, F4JC20, F4KDH9, O23372, O35698, O94687, P0DW16, P78332, Q01613, Q14966, Q17QQ9, Q27IV2, Q2T9M9, Q32KY7, Q32PP1, Q3UQS8, Q4R731, Q53FD0, Q5LJZ2, Q5PPL1, Q5R6I3, Q5T481, Q5VT06, Q60990, Q61464, Q6AYU0, Q6H7U2, Q6IMN6, Q6P9P0, Q6UB98, Q6UB99, Q86V48, Q8BYK8, Q8CH25, Q8IH18, Q8K2H1
Diamond homologs: E9Q4F7, Q6UB98, Q6UB99
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
290 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 4 |
| Likely pathogenic | 0 |
| Uncertain significance | 252 |
| Likely benign | 16 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (4)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1526591 | GRCh37/hg19 18p11.32-11.21(chr18:136226-13655146) | Pathogenic |
| 33085 | GRCh38/hg38 18p11.32-q23(chr18:148963-80252149)x3 | Pathogenic |
| 58752 | GRCh38/hg38 18p11.23-11.22(chr18:7542605-9320894)x3 | Pathogenic |
| 59957 | GRCh38/hg38 18p11.31-11.22(chr18:7154668-10068356)x1 | Pathogenic |
SpliceAI
2828 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 18:9182516:AAAG:A | donor_loss | 1.0000 |
| 18:9182517:AAGG:A | donor_loss | 1.0000 |
| 18:9182518:AGG:A | donor_loss | 1.0000 |
| 18:9182519:GG:G | donor_loss | 1.0000 |
| 18:9182520:GTAT:G | donor_loss | 1.0000 |
| 18:9182521:T:G | donor_loss | 1.0000 |
| 18:9195546:A:AG | acceptor_gain | 1.0000 |
| 18:9195548:T:G | acceptor_gain | 1.0000 |
| 18:9195549:A:AG | acceptor_gain | 1.0000 |
| 18:9195550:G:C | acceptor_gain | 1.0000 |
| 18:9195550:G:GG | acceptor_gain | 1.0000 |
| 18:9195550:GA:G | acceptor_gain | 1.0000 |
| 18:9195550:GAG:G | acceptor_loss | 1.0000 |
| 18:9195550:GAGT:G | acceptor_gain | 1.0000 |
| 18:9195550:GAGTA:G | acceptor_gain | 1.0000 |
| 18:9208799:TCCAG:T | donor_loss | 1.0000 |
| 18:9208800:CCAGG:C | donor_loss | 1.0000 |
| 18:9208801:CAG:C | donor_loss | 1.0000 |
| 18:9208802:AGG:A | donor_loss | 1.0000 |
| 18:9208803:GGTGA:G | donor_loss | 1.0000 |
| 18:9208804:G:A | donor_loss | 1.0000 |
| 18:9208825:T:G | donor_gain | 1.0000 |
| 18:9211579:TACA:T | acceptor_loss | 1.0000 |
| 18:9211580:ACAG:A | acceptor_loss | 1.0000 |
| 18:9211581:CA:C | acceptor_loss | 1.0000 |
| 18:9211582:A:AC | acceptor_loss | 1.0000 |
| 18:9211582:A:AG | acceptor_gain | 1.0000 |
| 18:9211583:G:GA | acceptor_gain | 1.0000 |
| 18:9211583:GA:G | acceptor_gain | 1.0000 |
| 18:9211583:GAT:G | acceptor_gain | 1.0000 |
AlphaMissense
13797 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 18:9211698:T:C | L189S | 1.000 |
| 18:9211710:C:A | A193D | 1.000 |
| 18:9211719:G:T | G196V | 1.000 |
| 18:9211775:G:C | D215H | 1.000 |
| 18:9211776:A:C | D215A | 1.000 |
| 18:9211776:A:G | D215G | 1.000 |
| 18:9211776:A:T | D215V | 1.000 |
| 18:9211777:T:A | D215E | 1.000 |
| 18:9211777:T:G | D215E | 1.000 |
| 18:9216760:T:A | W219R | 1.000 |
| 18:9216760:T:C | W219R | 1.000 |
| 18:9216761:G:C | W219S | 1.000 |
| 18:9216762:G:C | W219C | 1.000 |
| 18:9216762:G:T | W219C | 1.000 |
| 18:9216767:C:A | P221Q | 1.000 |
| 18:9216767:C:G | P221R | 1.000 |
| 18:9216770:T:A | L222Q | 1.000 |
| 18:9216770:T:C | L222P | 1.000 |
| 18:9216772:C:G | H223D | 1.000 |
| 18:9216773:A:C | H223P | 1.000 |
| 18:9216773:A:G | H223R | 1.000 |
| 18:9216778:G:C | A225P | 1.000 |
| 18:9216781:T:C | C226R | 1.000 |
| 18:9216782:G:A | C226Y | 1.000 |
| 18:9216783:C:G | C226W | 1.000 |
| 18:9216791:G:A | G229E | 1.000 |
| 18:9216791:G:T | G229V | 1.000 |
| 18:9216806:C:A | A234D | 1.000 |
| 18:9216815:T:A | L237H | 1.000 |
| 18:9216815:T:C | L237P | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000015089 (18:9165823 C>G,T), RS1000026401 (18:9251185 C>G,T), RS1000046153 (18:9168018 A>G), RS1000047148 (18:9173094 G>A,T), RS1000092925 (18:9249960 G>C), RS1000117114 (18:9272519 A>G), RS1000127927 (18:9136181 G>A), RS1000169617 (18:9170579 C>G), RS1000195279 (18:9144616 A>G), RS1000227548 (18:9207572 C>A,G), RS1000248654 (18:9267250 T>A), RS1000249627 (18:9214179 T>G), RS1000279458 (18:9180836 T>A), RS1000302590 (18:9239410 G>C), RS1000310048 (18:9252315 C>T)
Disease associations
OMIM: gene MIM:610616 | disease phenotypes:
GenCC curated gene-disease
Mondo (1): prostate cancer (MONDO:0008315)
Orphanet (1): Familial prostate cancer (Orphanet:1331)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
4 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002945_17 | Emphysema imaging phenotypes | 4.000000e-07 |
| GCST002945_38 | Emphysema imaging phenotypes | 4.000000e-07 |
| GCST90002390_548 | Mean corpuscular hemoglobin | 1.000000e-10 |
| GCST90002392_28 | Mean corpuscular volume | 1.000000e-09 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0007626 | emphysema imaging measurement |
| EFO:0004527 | mean corpuscular hemoglobin |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D011471 | Prostatic Neoplasms | C04.588.945.440.770; C12.100.500.260.750; C12.100.500.565.625; C12.200.294.260.750; C12.200.294.565.625; C12.200.758.409.750; C12.900.619.750 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
64 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | decreases expression, decreases methylation | 5 |
| trichostatin A | affects cotreatment, decreases expression, affects expression | 3 |
| bisphenol A | decreases expression, affects cotreatment, increases methylation | 2 |
| Tetrachlorodibenzodioxin | increases expression | 2 |
| Cyclosporine | increases expression, increases methylation | 2 |
| aristolochic acid I | decreases expression | 1 |
| FR900359 | affects phosphorylation | 1 |
| bisphenol F | affects cotreatment, decreases expression | 1 |
| dicrotophos | decreases expression | 1 |
| methylmercuric chloride | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| arsenite | affects expression | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | increases expression | 1 |
| sodium arsenite | increases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| K 7174 | increases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, decreases expression | 1 |
| dorsomorphin | affects cotreatment, decreases expression | 1 |
| 2-(1H-indazol-4-yl)-6-(4-methanesulfonylpiperazin-1-ylmethyl)-4-morpholin-4-ylthieno(3,2-d)pyrimidine | increases response to substance, increases expression | 1 |
| bisphenol S | affects cotreatment, decreases expression | 1 |
| jinfukang | decreases expression | 1 |
| NSC 689534 | affects binding, increases expression | 1 |
| PCI 5002 | affects cotreatment, increases expression | 1 |
| 3-(2-hydroxy-4-(2-methylnonan-2-yl)phenyl)cyclohexan-1-ol | decreases expression | 1 |
| Arsenic Trioxide | increases expression | 1 |
| Fulvestrant | affects cotreatment, increases methylation | 1 |
| Leflunomide | increases expression | 1 |
| Acetaminophen | decreases expression | 1 |
| Air Pollutants | decreases expression, increases abundance | 1 |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00029224 | PHASE4 | COMPLETED | Treatment With Zoledronic Acid in Patients With Breast Cancer, Multiple Myeloma, and Prostate Cancer With Cancer Related Bone Lesions |
| NCT00035997 | PHASE4 | COMPLETED | Open-label Trial on the Effect of I.V. Zoledronic Acid 4 mg on Bone Density in Hormone Sensitive Prostate Cancer Patients With Bone Metastasis |
| NCT00063609 | PHASE4 | COMPLETED | The Effect of Zoledronic Acid on Bone Loss in Prostate Cancer Patients Undergoing Androgen Deprivation Therapy |
| NCT00103623 | PHASE4 | SUSPENDED | The Plenaxis® Experience Study |
| NCT00106392 | PHASE4 | COMPLETED | A Safety and Efficacy Study of Prograf in the Prevention of Erectile Dysfunction After Radical Prostatectomy |
| NCT00185029 | PHASE4 | UNKNOWN | MR-Lymphography and Lymph Node Staging in Prostate Cancer |
| NCT00199485 | PHASE4 | COMPLETED | Angelica Sinensis for the Treatment of Hot Flashes in Men Undergoing LHRH Therapy for Prostate Cancer |
| NCT00219219 | PHASE4 | COMPLETED | Zoledronic Acid in the Prevention of Skeletal-related Events in Hormone Refractory and Hormone-sensitive Prostate Cancer Patients With Bone Metastases |
| NCT00219271 | PHASE4 | COMPLETED | Effect Of Zoledronic Acid On Circulating And Bone Marrow-Residing Prostate Cancer Cells In Patients With Clinically Localized Prostate Cancer |
| NCT00237146 | PHASE4 | COMPLETED | Study to Evaluate Zoledronic Acid on Quality of Life and Skeletal-related Events as Adjuvant Treatment in Patients With Hormone-naïve Prostate Cancer and Bone Metastasis Who Have Undergone Orchiectomy |
| NCT00242554 | PHASE4 | COMPLETED | Open-label Phase IV Clinical Trial to Evaluate the Safety and Tolerability of Zoledronic Acid in Patients With Prostate Cancer and Bone Metastases |
| NCT00280098 | PHASE4 | COMPLETED | Docetaxel in the Treatment of Hormone Refractory Prostate Cancer |
| NCT00293696 | PHASE4 | COMPLETED | Casodex/Zoladex Biomarkers in Localised Prostate Cancer |
| NCT00334139 | PHASE4 | COMPLETED | Effect of Zoledronic Acid on Bone Metabolism in Patients With Bone Metastasis and Prostate or Breast Cancer |
| NCT00375765 | PHASE4 | COMPLETED | Effects On Dihydrotestosterone Regulated Gene Expression In Benign Prostatic Hyperplasia Or Prostate Cancer |
| NCT00391690 | PHASE4 | COMPLETED | Evaluation of Bone Markers as Diagnostic Tools for Early Detection of Bone Metastases in Patients With High Risk Prostate Cancer |
| NCT00422708 | PHASE4 | COMPLETED | Local Anesthesia for Prostate Biopsy |
| NCT00526331 | PHASE4 | COMPLETED | Evaluation of Arterial Pressure Based Cardiac Output for Goal-Directed Perioperative Therapy |
| NCT00590213 | PHASE4 | COMPLETED | Compare the Value of Prophylactic Versus Therapeutic Breast Radiotherapy in CASODEX |
| NCT00629330 | PHASE4 | TERMINATED | Dissemination of Prostate Cancer Screening to PCP’s in African American Communities |
| NCT00771966 | PHASE4 | COMPLETED | Radical Prostatectomy and Perioperative Fluid Therapy |
| NCT00805701 | PHASE4 | COMPLETED | Study Assessing The Efficacy And Safety Of Avodart (Dutasteride) At Improving Urinary Symptoms In Men With Prostate Cancer Who Are Undergoing Seed Implantation |
| NCT00859027 | PHASE4 | COMPLETED | Effect Of Risedronate On Bone Mass In Older Men Receiving Neoadjuvant Therapy For Prostate Cancer |
| NCT00906269 | PHASE4 | UNKNOWN | Can Hyperbaric Oxygen Improve Erectile Function Following Surgery for Prostate Cancer |
| NCT00953277 | PHASE4 | COMPLETED | Study of Nerve Reconstruction Using AVANCE in Subjects Who Undergo Robotic Assisted Prostatectomy for Treatment of Prostate Cancer |
| NCT00982800 | PHASE4 | COMPLETED | Does Postoperative Gabapentin Reduce Pain, Opioid Consumption and Anxiety and Have a Positive Effect on Health Related Quality of Life After Radical Prostatectomy? |
| NCT01083199 | PHASE4 | COMPLETED | Global Performance Evaluation of the AMS CONTINUUM™ Device |
| NCT01136226 | PHASE4 | COMPLETED | Evaluate Recovery of Testosterone for Patients Using Eligard |
| NCT01161563 | PHASE4 | COMPLETED | Randomized Crossover Trial to Assess the Tolerability of Gonadotropin Releasing Hormone (GnRH) Analogue Administration |
| NCT01230905 | PHASE4 | COMPLETED | Study to Monitor the Effects of Androgen Suppression Treatment on the Heart |
| NCT01296672 | PHASE4 | COMPLETED | 3 Month Finasteride Challenge Test Can Significantly Improve the Performance of Screening for Prostate Cancer |
| NCT01365143 | PHASE4 | TERMINATED | Prospective Randomized Trial Comparing Robotic Versus Open Radical Prostatectomy |
| NCT01379742 | PHASE4 | UNKNOWN | Comparison of Between ThinSeed™ and OncoSeed™ for Permanent Prostate Brachytherapy |
| NCT01486563 | PHASE4 | COMPLETED | Hydroxyethyl Starch and Renal Function After Radical Prostatectomy |
| NCT01511874 | PHASE4 | COMPLETED | Efficacy and Safety Study of ELIGARD 22.5mg With Prostate Cancer |
| NCT01512472 | PHASE4 | TERMINATED | Firmagon (Degarelix) Intermittent Therapy |
| NCT01547416 | PHASE4 | COMPLETED | The Effect of Combined General/Epidural Anesthesia Versus General Anesthesia on Diaphragmatic Function |
| NCT01571544 | PHASE4 | COMPLETED | The Use of Thermal Suits as Preventing Hypothermia During Surgery |
| NCT01581749 | PHASE4 | UNKNOWN | Evaluation of Truebeam for Low-Intermediate Risk Prostate Cancer |
| NCT01649635 | PHASE4 | COMPLETED | Study of Cabazitaxel Combined With Prednisone and Prophylaxis of Neutropenia Complications in the Treatment of Patients With Metastatic Castration-resistant Prostate Cancer |
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.