ANKRD13C-DT

Summary

ANKRD13C-DT (ANKRD13C divergent transcript, HGNC:4906) is a long non-coding RNA gene on chromosome 1p31.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:4906
Approved symbol	ANKRD13C-DT
Name	ANKRD13C divergent transcript
Location	1p31.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000197568
Ensembl biotype	lncRNA
OMIM	604372
Entrez	11147
RNAcentral	URS0001BBE634 — lncRNA, 850 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 17 — 17 lncRNA

ENST00000359875, ENST00000361764, ENST00000370940, ENST00000463058, ENST00000486110, ENST00000525653, ENST00000531950, ENST00000689607, ENST00000820265, ENST00000820266, ENST00000820267, ENST00000820268, ENST00000820269, ENST00000820270, ENST00000820271, ENST00000820272, ENST00000820273

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000359875 — 3 exons

Exon	Start	End
ENSE00001829515	70367617	70368023
ENSE00003642803	70366444	70366537
ENSE00004226068	70354780	70355208

Expression profiles

Bgee: expression breadth ubiquitous, 218 present calls, max score 92.45.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 16.4650 / max 153.5217, expressed in 1782 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
3487	16.4650	1782

Top tissues by expression

270 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	92.45	gold quality
buccal mucosa cell	CL:0002336	91.10	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	90.96	gold quality
right adrenal gland	UBERON:0001233	89.60	gold quality
right adrenal gland cortex	UBERON:0035827	89.32	gold quality
nucleus accumbens	UBERON:0001882	89.29	gold quality
spinal cord	UBERON:0002240	89.16	gold quality
tendon of biceps brachii	UBERON:0008188	89.01	gold quality
left adrenal gland cortex	UBERON:0035825	88.70	gold quality
left adrenal gland	UBERON:0001234	88.54	gold quality
caudate nucleus	UBERON:0001873	88.28	gold quality
amygdala	UBERON:0001876	88.10	gold quality
anterior cingulate cortex	UBERON:0009835	88.03	gold quality
putamen	UBERON:0001874	88.00	gold quality
cingulate cortex	UBERON:0003027	87.88	gold quality
adrenal cortex	UBERON:0001235	87.85	gold quality
right frontal lobe	UBERON:0002810	86.45	gold quality
adrenal gland	UBERON:0002369	86.32	gold quality
right lobe of liver	UBERON:0001114	86.18	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.73	gold quality
hypothalamus	UBERON:0001898	85.63	gold quality
medial globus pallidus	UBERON:0002477	85.04	gold quality
right uterine tube	UBERON:0001302	85.03	gold quality
adenohypophysis	UBERON:0002196	85.02	gold quality
cranial nerve II	UBERON:0000941	85.00	gold quality
mucosa of transverse colon	UBERON:0004991	84.93	gold quality
left ovary	UBERON:0002119	84.82	gold quality
pituitary gland	UBERON:0000007	84.53	gold quality
islet of Langerhans	UBERON:0000006	84.21	gold quality
prefrontal cortex	UBERON:0000451	84.15	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.15

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.