ANKRD17-DT

Summary

ANKRD17-DT (ANKRD17 divergent transcript, HGNC:55556) is a long non-coding RNA gene on chromosome 4q13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55556
Approved symbol	ANKRD17-DT
Name	ANKRD17 divergent transcript
Location	4q13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000250220
Ensembl biotype	lncRNA
Entrez	102724832
RNAcentral	URS00026A27CB — lncRNA, 2024 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 24 — 24 lncRNA

ENST00000502790, ENST00000835865, ENST00000835866, ENST00000835867, ENST00000835868, ENST00000835869, ENST00000835870, ENST00000835871, ENST00000835872, ENST00000835873, ENST00000835874, ENST00000835875, ENST00000835876, ENST00000835877, ENST00000835878, ENST00000835879, ENST00000835880, ENST00000835881, ENST00000835882, ENST00000835883, ENST00000835884, ENST00000835885, ENST00000835886, ENST00000835887

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000502790 — 5 exons

Exon	Start	End
ENSE00002020081	73317827	73317953
ENSE00002065258	73307076	73307181
ENSE00002069872	73302264	73302385
ENSE00002071243	73259209	73259408
ENSE00002082344	73269824	73269953

Expression profiles

Bgee: expression breadth ubiquitous, 128 present calls, max score 87.88.

Top tissues by expression

128 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.88	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	81.63	gold quality
sural nerve	UBERON:0015488	73.80	gold quality
corpus callosum	UBERON:0002336	71.35	gold quality
ventricular zone	UBERON:0003053	68.80	gold quality
calcaneal tendon	UBERON:0003701	67.70	gold quality
right uterine tube	UBERON:0001302	66.54	gold quality
adrenal tissue	UBERON:0018303	65.04	gold quality
nucleus accumbens	UBERON:0001882	64.86	gold quality
left ovary	UBERON:0002119	64.84	gold quality
ganglionic eminence	UBERON:0004023	64.49	gold quality
ovary	UBERON:0000992	64.03	gold quality
adenohypophysis	UBERON:0002196	63.98	gold quality
pituitary gland	UBERON:0000007	63.92	gold quality
tibial nerve	UBERON:0001323	63.82	gold quality
body of uterus	UBERON:0009853	63.63	gold quality
thyroid gland	UBERON:0002046	63.50	gold quality
popliteal artery	UBERON:0002250	63.22	gold quality
tibial artery	UBERON:0007610	63.17	gold quality
putamen	UBERON:0001874	63.13	gold quality
left lobe of thyroid gland	UBERON:0001120	63.06	gold quality
fallopian tube	UBERON:0003889	63.05	gold quality
right ovary	UBERON:0002118	62.87	gold quality
urinary bladder	UBERON:0001255	62.73	gold quality
right lobe of thyroid gland	UBERON:0001119	62.58	gold quality
duodenum	UBERON:0002114	62.40	gold quality
prostate gland	UBERON:0002367	62.25	gold quality
caudate nucleus	UBERON:0001873	61.94	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	61.82	gold quality
amygdala	UBERON:0001876	61.74	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.33

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.