ANKRD42-DT

Summary

ANKRD42-DT (ANKRD42 divergent transcript, HGNC:55590) is a long non-coding RNA gene on chromosome 11q14.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55590
Approved symbol	ANKRD42-DT
Name	ANKRD42 divergent transcript
Location	11q14.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000247137
Ensembl biotype	lncRNA
Entrez	100506282
RNAcentral	URS0000BC4598 — lncRNA, 547 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 16 — 15 lncRNA, 1 TEC

ENST00000500634, ENST00000528083, ENST00000528524, ENST00000529031, ENST00000529607, ENST00000529811, ENST00000530825, ENST00000602381, ENST00000624533, ENST00000665524, ENST00000781903, ENST00000781904, ENST00000781905, ENST00000781906, ENST00000781907, ENST00000781908

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000500634 — 2 exons

Exon	Start	End
ENSE00004154386	83192137	83192816
ENSE00004154392	83193467	83193668

Expression profiles

Bgee: expression breadth ubiquitous, 225 present calls, max score 89.63.

Top tissues by expression

274 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	89.63	silver quality
calcaneal tendon	UBERON:0003701	87.27	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.82	gold quality
tendon	UBERON:0000043	82.36	gold quality
left testis	UBERON:0004533	78.53	gold quality
right testis	UBERON:0004534	78.08	gold quality
corpus epididymis	UBERON:0004359	77.75	gold quality
granulocyte	CL:0000094	77.57	gold quality
hindlimb stylopod muscle	UBERON:0004252	77.31	gold quality
tendon of biceps brachii	UBERON:0008188	76.81	silver quality
testis	UBERON:0000473	76.74	gold quality
cerebellar vermis	UBERON:0004720	76.29	gold quality
right atrium auricular region	UBERON:0006631	76.14	gold quality
adenohypophysis	UBERON:0002196	76.03	gold quality
right uterine tube	UBERON:0001302	75.55	gold quality
right lobe of thyroid gland	UBERON:0001119	75.42	gold quality
pituitary gland	UBERON:0000007	75.39	gold quality
mucosa of stomach	UBERON:0001199	75.37	gold quality
left lobe of thyroid gland	UBERON:0001120	74.96	gold quality
caput epididymis	UBERON:0004358	74.87	gold quality
thyroid gland	UBERON:0002046	74.64	gold quality
cardiac atrium	UBERON:0002081	74.54	gold quality
apex of heart	UBERON:0002098	74.42	gold quality
left adrenal gland cortex	UBERON:0035825	74.36	gold quality
adrenal tissue	UBERON:0018303	74.33	gold quality
left ovary	UBERON:0002119	74.19	gold quality
adrenal cortex	UBERON:0001235	73.98	gold quality
left adrenal gland	UBERON:0001234	73.73	gold quality
cauda epididymis	UBERON:0004360	73.64	gold quality
lower esophagus mucosa	UBERON:0035834	73.37	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	4.07

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.