APOBEC3B-AS1

Summary

APOBEC3B-AS1 (APOBEC3B antisense RNA 1, HGNC:43836) is a long non-coding RNA gene on chromosome 22q13.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:43836
Approved symbol	APOBEC3B-AS1
Name	APOBEC3B antisense RNA 1
Location	22q13.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249310
Ensembl biotype	lncRNA
Entrez	100874530
RNAcentral	URS000075D1EF — lncRNA, 702 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000513758

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000513758 — 5 exons

Exon	Start	End
ENSE00002022468	38991559	38991618
ENSE00002028732	38998086	38998209
ENSE00002035853	38997481	38997737
ENSE00002084126	38992938	38993003
ENSE00002086905	38992398	38992581

Expression profiles

Bgee: expression breadth broad, 83 present calls, max score 85.91.

Top tissues by expression

83 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	85.91	gold quality
sural nerve	UBERON:0015488	77.03	silver quality
ganglionic eminence	UBERON:0004023	63.36	gold quality
duodenum	UBERON:0002114	57.83	gold quality
bone marrow	UBERON:0002371	57.58	gold quality
blood	UBERON:0000178	57.57	gold quality
monocyte	CL:0000576	57.47	gold quality
kidney	UBERON:0002113	54.75	gold quality
mucosa of transverse colon	UBERON:0004991	54.44	gold quality
islet of Langerhans	UBERON:0000006	53.85	gold quality
vermiform appendix	UBERON:0001154	53.03	gold quality
liver	UBERON:0002107	52.36	silver quality
prefrontal cortex	UBERON:0000451	51.17	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	51.17	gold quality
urinary bladder	UBERON:0001255	50.88	gold quality
granulocyte	CL:0000094	50.64	silver quality
multicellular organism	UBERON:0000468	49.67	gold quality
thyroid gland	UBERON:0002046	49.13	gold quality
left lobe of thyroid gland	UBERON:0001120	48.47	gold quality
lymph node	UBERON:0000029	47.95	silver quality
tibial nerve	UBERON:0001323	46.84	silver quality
right lobe of thyroid gland	UBERON:0001119	46.60	gold quality
body of pancreas	UBERON:0001150	46.58	silver quality
vagina	UBERON:0000996	45.92	gold quality
heart left ventricle	UBERON:0002084	45.85	gold quality
placenta	UBERON:0001987	45.63	gold quality
tibial artery	UBERON:0007610	45.12	gold quality
gastrocnemius	UBERON:0001388	45.11	silver quality
heart	UBERON:0000948	44.84	gold quality
Brodmann (1909) area 9	UBERON:0013540	44.08	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.43

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.