ARF1

gene
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Summary

ARF1 (ARF GTPase 1, HGNC:652) is a protein-coding gene on chromosome 1q42.13, encoding ADP-ribosylation factor 1 (P84077). Small GTPase involved in protein trafficking between different compartments. It is a selective cancer dependency (DepMap: 30.5% of cell lines).

ADP-ribosylation factor 1 (ARF1) is a member of the human ARF gene family. The family members encode small guanine nucleotide-binding proteins that stimulate the ADP-ribosyltransferase activity of cholera toxin and play a role in vesicular trafficking as activators of phospholipase D. The gene products, including 6 ARF proteins and 11 ARF-like proteins, constitute a family of the RAS superfamily. The ARF proteins are categorized as class I (ARF1, ARF2 and ARF3), class II (ARF4 and ARF5) and class III (ARF6), and members of each class share a common gene organization. The ARF1 protein is localized to the Golgi apparatus and has a central role in intra-Golgi transport. Multiple alternatively spliced transcript variants encoding the same protein have been found for this gene.

Source: NCBI Gene 375 — RefSeq curated summary.

At a glance

  • Gene–disease (curated): periventricular nodular heterotopia (Definitive, ClinGen) — +1 more curated relationship
  • GWAS associations: 2
  • Clinical variants (ClinVar): 45 total — 7 pathogenic, 5 likely-pathogenic
  • Phenotypes (HPO): 25
  • Druggable target: yes
  • Cancer dependency (DepMap): dependent in 30.5% of screened cell lines
  • MANE Select transcript: NM_001658

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:652
Approved symbolARF1
NameARF GTPase 1
Location1q42.13
Locus typegene with protein product
StatusApproved
Ensembl geneENSG00000143761
Ensembl biotypeprotein_coding
OMIM103180
Entrez375

Gene structure

Transcript identifiers

Ensembl transcripts: 43 — 42 protein_coding, 1 retained_intron

ENST00000272102, ENST00000469235, ENST00000470558, ENST00000470670, ENST00000473546, ENST00000473949, ENST00000477451, ENST00000478336, ENST00000478424, ENST00000482962, ENST00000490705, ENST00000497165, ENST00000862334, ENST00000862335, ENST00000862336, ENST00000862337, ENST00000862338, ENST00000862339, ENST00000862340, ENST00000862341, ENST00000862342, ENST00000862343, ENST00000862344, ENST00000862345, ENST00000862346, ENST00000862347, ENST00000862348, ENST00000862349, ENST00000862350, ENST00000862351, ENST00000862352, ENST00000862353, ENST00000862354, ENST00000862355, ENST00000926347, ENST00000926348, ENST00000926349, ENST00000926350, ENST00000953456, ENST00000953457, ENST00000953458, ENST00000953459, ENST00000953460

RefSeq mRNA: 4 — MANE Select: NM_001658 NM_001024226, NM_001024227, NM_001024228, NM_001658

CCDS: CCDS1565

Canonical transcript exons

ENST00000272102 — 5 exons

ExonStartEnd
ENSE00001015362228082708228082765
ENSE00001908017228097852228099212
ENSE00003473670228097078228097262
ENSE00003625230228097591228097715
ENSE00003646335228097342228097452

Expression profiles

Bgee: expression breadth ubiquitous, 295 present calls, max score 99.62.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 300.1295 / max 1290.5057, expressed in 1827 samples.

FANTOM5 promoters (8 alternative TSS)

Promoter IDTPM avgSamples expressed
8908292.57731827
89094.94491367
89171.6616937
89110.5651149
89120.288759
89100.033810
89130.029712
2019810.02846

Top tissues by expression

295 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
adult organismUBERON:000702399.62gold quality
ileal mucosaUBERON:000033199.57gold quality
stromal cell of endometriumCL:000225599.51gold quality
cardiac muscle of right atriumUBERON:000337999.43gold quality
type B pancreatic cellCL:000016999.36gold quality
pituitary glandUBERON:000000799.35gold quality
adenohypophysisUBERON:000219699.35gold quality
corpus epididymisUBERON:000435999.32gold quality
right lungUBERON:000216799.28gold quality
upper lobe of lungUBERON:000894899.27gold quality
upper lobe of left lungUBERON:000895299.27gold quality
deciduaUBERON:000245099.26gold quality
islet of LangerhansUBERON:000000699.24gold quality
left uterine tubeUBERON:000130399.24gold quality
caput epididymisUBERON:000435899.24gold quality
endocervixUBERON:000045899.23gold quality
nasal cavity epitheliumUBERON:000538499.23gold quality
monocyteCL:000057699.22gold quality
mononuclear cellCL:000084299.21gold quality
colonic mucosaUBERON:000031799.21gold quality
palpebral conjunctivaUBERON:000181299.21gold quality
left testisUBERON:000453399.21gold quality
prefrontal cortexUBERON:000045199.20gold quality
ascending aortaUBERON:000149699.20gold quality
thoracic aortaUBERON:000151599.20gold quality
placentaUBERON:000198799.20gold quality
body of uterusUBERON:000985399.20gold quality
leukocyteCL:000073899.19gold quality
body of pancreasUBERON:000115099.19gold quality
right testisUBERON:000453499.19gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 2.

ExperimentMarker?Max mean expression
E-CURD-122yes20.91
E-ANND-3no0.00

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): MYC, ZBTB2

miRNA regulators (miRDB)

49 targeting ARF1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-3064-3P100.0070.091254
HSA-MIR-4510100.0066.602050
HSA-MIR-6127100.0066.762188
HSA-MIR-6129100.0066.462080
HSA-MIR-6130100.0066.692012
HSA-MIR-6133100.0066.482064
HSA-MIR-4776-3P100.0068.731340
HSA-MIR-1212199.9966.64255
HSA-MIR-32-5P99.9875.211964
HSA-MIR-92A-3P99.9875.211960
HSA-MIR-92B-3P99.9875.251955
HSA-MIR-25-3P99.9874.601817
HSA-MIR-363-3P99.9874.721821
HSA-MIR-367-3P99.9874.831819
HSA-MIR-1213699.9872.815713
HSA-MIR-4715-3P99.9866.03670
HSA-MIR-570-3P99.9672.414910
HSA-MIR-548J-3P99.9472.614881
HSA-MIR-95-5P99.8972.173973
HSA-MIR-1211999.8768.351653
HSA-MIR-548D-3P99.8770.674362
HSA-MIR-548BB-3P99.8670.584354
HSA-MIR-576-5P99.8470.462582
HSA-MIR-548AC99.8470.774351
HSA-MIR-548H-3P99.8470.804349
HSA-MIR-548Z99.8470.804349
HSA-MIR-63699.8069.581500
HSA-MIR-323A-3P99.7970.301739
HSA-MIR-320A-3P99.7769.732107
HSA-MIR-320B99.7769.732107

Functional genomics

DepMap (CRISPR cell-line fitness): dependent in 30.5% of screened cell lines.

Literature-anchored findings (GeneRIF, showing 40)

  • A senescence rescue screen identifies BCL6 as an inhibitor of anti-proliferative p19(ARF)-p53 signaling (PMID:11914273)
  • ARF1 has a role in phospholipase D activation by the M3 muscarinic receptor (PMID:12799371)
  • human ARF tumor suppressor binds to Tat-binding protein-1 and has a role in control of cell proliferation (PMID:14665636)
  • Overexpression of SPN causes activation of the tumor suppressor protein ARF1. (PMID:14676827)
  • crystal structure of the ARF1*GDP*Sec7*Brefeldin A (BFA)complex shows that BFA binds at the protein-protein interface to inhibit conformational changes in ARF1 required for Sec7 to dislodge the GDP molecule (PMID:14690595)
  • Results from NMR experiments presented on ADP-ribosylation factor 1 (Arf1).GDP and Delta17Arf1.GDP in solution reveal substantial structural differences that can only be associated with N-terminal truncation. (PMID:15308674)
  • GDP-bound ARF1 induces dissociation of ADRP from the Lipid droplet surface;. (PMID:15336557)
  • Binding of Arf1 to phosphatidylinositol (4,5) bisphosphate can promote the nucleotide exchange process and facilitate activation of Arfs with associated conformational changes and possible alteration in position and stability of Arf1 N-terminal helix. (PMID:15581351)
  • Arf1 mRNA is a natural target for Stau1-mediated decay, and data indicate that other mRNAs are also natural targets. (PMID:15680326)
  • These studies suggest that membrin recruits Arf-1 to the early Golgi and reveal distinct kinetic cycles for Arf-1 at early and late Golgi determined by different sets of Arf regulators and effectors. (PMID:15781476)
  • The ADP-Ribosylation Factor 1 acts as a master regulator of Golgi structure and function through the recruitment and activation of various downstream effectors. (PMID:15793564)
  • CTLA-4 may be stored in a specialized compartment in regulatory T cells that can be triggered rapidly for deployment to the plasma membrane in a phospholipase D- and ADP ribosylation factor-1-dependent manner (PMID:15814706)
  • MdmX can affect post-translational modification and stability of Mdm2 and p53 activity through interaction with ARF (PMID:15876864)
  • Analysis of the four possible conformations of the human ARF1 N-terminal peptide by molecular dynamics simulations to distinguish which of the four possible membrane bound structures was the most likely. (PMID:16308272)
  • N376 to D mutation in the conserved NPxxY motif within the carboxy terminal tail domain (CT) of the 5-HT2A receptor alters the binding preference of GST-fusion protein constructs of the CT domain from ARF1 to an alternative isoform, ARF6. (PMID:16545942)
  • A phosphatidylinositol-3-kinase-dependent signal transition defines the sequence of ARF1 activation during phagocytosis. (PMID:16669702)
  • Data show that the architecture of the vimentin cytoskeleton is modified by perturbation of the GTPase ARF1. (PMID:16912072)
  • Arf1-GTP-ASAP1 undergoes a significant conformational change when transitioning from the ground to catalytically active state (PMID:17112341)
  • Coatomer is linked to the Golgi through multiple interfaces with membrane-bound Arf1-GTP. (PMID:17451557)
  • Enhanced the stimulatory effect of 1-Phosphatidylinositol 4-Kinase on regulated exocytosis. (PMID:17555535)
  • p24A is a regulator of signal-dependent trafficking that controls ARF1-dependent resensitization of PAR-2 (PMID:17693410)
  • These results suggest that KIAA1110 is expressed specifically in mature neurons and may play an important role in the secretion pathway as a GEF for ARF1. (PMID:17981261)
  • siRNAs demonstrate that GBF1-mediated ARF1 activation is required for efficient MHV RNA replication (PMID:18551169)
  • Arf1 and Arf6 were shown to load GTP in a membrane-curvature-dependent manner and stabilize, or further facilitate, changes in membrane curvature through the insertion of an amphipathic helix. (PMID:18597672)
  • Arf1-GTP induces positive membrane curvature and find that the small GTPase can dimerize dependent on GTP (PMID:18689681)
  • Arf1-GTP-induced tubule formation suggests a function of Arf family proteins in curvature acquisition at sites of vesicle budding. (PMID:18693248)
  • ARF1 regulates epidermal growth factor-dependent breast cancer cell growth and invasion during cancer progression by controlling the activation of the phosphatidylinositol 3-kinase pathway (PMID:18990689)
  • present the structure of a myristoylated ARF1 protein, determined by solution NMR methods, and an assessment of the influence of myristoylation on association of ARF1.GDP and ARF1.GTP with lipid bilayers (PMID:19141284)
  • ARF1 may play a critical role in clathrin-mediated cholera toxin (CT) trafficking through the endoplasmic reticulum and Golgi and ARF6 may facilitate clathrin-mediated CT endocytosis that leads to enhanced Gs(alpha) activation by CT. (PMID:19359423)
  • Data suggest a novel model in which ARF1 recruits PKD2 to the TGN by binding to Pro275 in its C1b domain followed by anchoring of PKD2 in the TGN membranes via binding of its C1a domain to diacylglycerol. (PMID:20089835)
  • The authors demonstrate that Rab1b-activated GBF1 and ARF1 are involved in Ebolavirus virion formation, suggesting that both the COPII and COPI transport systems play a role in Ebolavirus VP40-mediated particle formation. (PMID:20164217)
  • analysis of how modifications to the C-terminus of Arf1 alter cell functions and protein interactions (PMID:20214751)
  • Protein complexes containing CYFIP/Sra/PIR121 coordinate Arf1 and Rac1 signalling during clathrin-AP-1-coated carrier biogenesis at the trans-golgi network. (PMID:20228810)
  • Data demonstrate a key role of Rab and Arf family small GTPases and intracellular trafficking in mTORC1 activation. (PMID:20457610)
  • Vascular endothelial growth factor receptor-2 activates ADP-ribosylation factor 1 to promote endothelial nitric-oxide synthase activation and nitric oxide release from endothelial cells (PMID:20529868)
  • Insight into the role of dynamics in the conformational switch of the small GTP-binding protein Arf1. (PMID:20861011)
  • Arf1 regulates PLA2G6-A activity together with Arf4; and gene silencing of Arf1 was shown to alter cytosolic coat protein I subunit recruitment to the early secretory pathway. (PMID:20881058)
  • These data provide novel insights into the role of Arf1 in the regulation of viral RNA replication and the production of infectious hepatitis C virus. (PMID:21068255)
  • Molecular basis of phosphatidylinositol 4-phosphate and ARF1 GTPase recognition by the FAPP1 pleckstrin homology (PH) domain. (PMID:21454700)
  • ARF1 controls proliferation of breast cancer cells by regulating the retinoblastoma protein (PMID:21478909)

Cross-species orthologs

5 orthologs

OrganismSymbolGene ID
danio_rerioarf2aENSDARG00000014763
mus_musculusArf1ENSMUSG00000048076
rattus_norvegicusENSRNOG00000063798
drosophila_melanogasterArf1FBGN0010348
caenorhabditis_elegansWBGENE00000182

Paralogs (30): ARF5 (ENSG00000004059), SAR1A (ENSG00000079332), ARFRP1 (ENSG00000101246), TRIM23 (ENSG00000113595), ARL6 (ENSG00000113966), ARL1 (ENSG00000120805), ARL4A (ENSG00000122644), ARL8B (ENSG00000134108), ARF3 (ENSG00000134287), ARL3 (ENSG00000138175), ARL5C (ENSG00000141748), ARL8A (ENSG00000143862), ARL11 (ENSG00000152213), SAR1B (ENSG00000152700), ARL5A (ENSG00000162980), ARF6 (ENSG00000165527), ARL5B (ENSG00000165997), ARF4 (ENSG00000168374), ARL13B (ENSG00000169379), ARL13A (ENSG00000174225), ARL10 (ENSG00000175414), ARL4D (ENSG00000175906), ARL14 (ENSG00000179674), ARL15 (ENSG00000185305), ARL17A (ENSG00000185829), ARL4C (ENSG00000188042), ARL9 (ENSG00000196503), ARL2 (ENSG00000213465), ARL16 (ENSG00000214087), ARL17B (ENSG00000228696)

Protein

Protein identifiers

ADP-ribosylation factor 1P84077 (reviewed: P84077)

All UniProt accessions (8): P84077, A0A8V8TNZ0, A0A8V8TNZ5, A0A8V8TP92, A0A8V8TP99, A0A8V8TPG9, A0A8V8TQC0, A0A8V8TQP8

UniProt curated annotations — full annotation on UniProt →

Function. Small GTPase involved in protein trafficking between different compartments. Modulates vesicle budding and uncoating within the Golgi complex. In its GTP-bound form, triggers the recruitment of coatomer proteins to the Golgi membrane. The hydrolysis of ARF1-bound GTP, which is mediated by ARFGAPs proteins, is required for dissociation of coat proteins from Golgi membranes and vesicles. The GTP-bound form interacts with PICK1 to limit PICK1-mediated inhibition of Arp2/3 complex activity; the function is linked to AMPA receptor (AMPAR) trafficking, regulation of synaptic plasticity of excitatory synapses and spine shrinkage during long-term depression (LTD). Plays a key role in the regulation of intestinal stem cells and gut microbiota, and is essential for maintaining intestinal homeostasis. Also plays a critical role in mast cell expansion but not in mast cell maturation by facilitating optimal mTORC1 activation. (Microbial infection) Functions as an allosteric activator of the cholera toxin catalytic subunit, an ADP-ribosyltransferase.

Subunit / interactions. Interacts (when activated) with GGA1, GGA2 and GGA3; the interaction is required for proper subcellular location of GGA1, GGA2 and GGA3. Interacts with ARHGAP21, ASAP2, HERC1, PRKCABP, PIP5K1B, TMED2, PSCD2, TMED10 and GRIA2. Interacts with ARFGAP1, which hydrolyzes GTP and thus, regulates its function. Interacts with PI4KB in the Golgi complex. Interacts with NCS1/FREQ in the Golgi and at the plasma membrane. Interacts with PLEKHA3. Interacts with PLEKHA8; the interaction, together with phosphatidylinositol 4-phosphate binding, is required for FAPP2-mediated glucosylceramide transfer activity. Interacts (activated) with PICK1 (via PDZ domain); the interaction blocks Arp2/3 complex inhibition. Interacts with IQSEC1. Interacts with C9orf72.

Subcellular location. Golgi apparatus membrane. Synapse. Synaptosome. Postsynaptic density.

Post-translational modifications. (Microbial infection) Demyristoylated by S.flexneri cysteine protease IpaJ which cleaves the peptide bond between N-myristoylated Gly-2 and Asn-3.

Disease relevance. Periventricular nodular heterotopia 8 (PVNH8) [MIM:618185] A form of periventricular nodular heterotopia, a disorder resulting from a defect in the pattern of neuronal migration in which ectopic collections of neurons lie along the lateral ventricles of the brain or just beneath, contiguously or in isolated patches. PVNH8 is an autosomal dominant disease characterized by developmental disabilities, speech delay, seizures and attention deficit-hyperactivity disorder. The disease is caused by variants affecting the gene represented in this entry.

Activity regulation. Alternates between an inactive GDP-bound form and an active GTP-bound form. Intrinsic GTPase activity is almost undetectable in vitro. Activated by guanine nucleotide-exchange factors (GEFs) and inactivated by GTPase-activating proteins (GAPs).

Similarity. Belongs to the small GTPase superfamily. Arf family.

RefSeq proteins (4): NP_001019397, NP_001019398, NP_001019399, NP_001649* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR005225Small_GTP-bdDomain
IPR006689Small_GTPase_ARF/SARFamily
IPR024156Small_GTPase_ARFFamily
IPR027417P-loop_NTPaseHomologous_superfamily
IPR045872Arf1-5-likeFamily

Pfam: PF00025

Catalyzed reactions (Rhea), 1 shown:

  • GTP + H2O = GDP + phosphate + H(+) (RHEA:19669)

UniProt features (32 total): strand 9, helix 8, sequence variant 3, turn 3, binding site 3, initiator methionine 1, chain 1, mutagenesis site 1, region of interest 1, modified residue 1, lipid moiety-binding region 1

Structure

Experimental structures (PDB)

40 structures, top 30 by resolution.

PDBMethodResolution (Å)
8SDWX-RAY DIFFRACTION1.75
1HURX-RAY DIFFRACTION2
7R4HELECTRON MICROSCOPY2.34
6FAEX-RAY DIFFRACTION2.35
1RE0X-RAY DIFFRACTION2.4
9QLOELECTRON MICROSCOPY2.47
9QLQELECTRON MICROSCOPY2.57
7DN8X-RAY DIFFRACTION2.61
9QLPELECTRON MICROSCOPY2.75
3O47X-RAY DIFFRACTION2.8
7DN9X-RAY DIFFRACTION3.29
6CM9ELECTRON MICROSCOPY3.73
6DFFELECTRON MICROSCOPY3.9
7MGEELECTRON MICROSCOPY3.94
9C5AELECTRON MICROSCOPY4.2
6D83ELECTRON MICROSCOPY4.27
9C59ELECTRON MICROSCOPY4.3
9C5BELECTRON MICROSCOPY4.5
9C58ELECTRON MICROSCOPY4.7
9U9RELECTRON MICROSCOPY6.6
6D84ELECTRON MICROSCOPY6.72
6CRIELECTRON MICROSCOPY6.8
9U9SELECTRON MICROSCOPY6.8
4HMYX-RAY DIFFRACTION7
9RTWELECTRON MICROSCOPY7.4
9QPQELECTRON MICROSCOPY7.5
9RTXELECTRON MICROSCOPY8.5
9RTYELECTRON MICROSCOPY8.9
8D4EELECTRON MICROSCOPY9.2
8D4CELECTRON MICROSCOPY9.3

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-P84077-F185.930.57

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Ligand- & substrate-binding residues (3): 24–32; 126–129; 160

Post-translational modifications (2): 2, 2

Mutagenesis-validated functional residues (1):

PositionPhenotype
71inhibits gtp hydrolysis. coatomer proteins recruitment to the golgi membrane and formation of coated vesicles are normal

Function

Pathways and Gene Ontology

Reactome pathways

39 pathways

IDPathway
R-HSA-1660499Synthesis of PIPs at the plasma membrane
R-HSA-1660514Synthesis of PIPs at the Golgi membrane
R-HSA-167590Nef Mediated CD4 Down-regulation
R-HSA-199992trans-Golgi Network Vesicle Budding
R-HSA-2132295MHC class II antigen presentation
R-HSA-432720Lysosome Vesicle Biogenesis
R-HSA-432722Golgi Associated Vesicle Biogenesis
R-HSA-6807878COPI-mediated anterograde transport
R-HSA-6811434COPI-dependent Golgi-to-ER retrograde traffic
R-HSA-6811438Intra-Golgi traffic
R-HSA-8950505Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation
R-HSA-9845576Glycosphingolipid transport
R-HSA-1280215Cytokine Signaling in Immune system
R-HSA-1280218Adaptive Immune System
R-HSA-1430728Metabolism
R-HSA-1483255PI Metabolism
R-HSA-1483257Phospholipid metabolism
R-HSA-162906HIV Infection
R-HSA-162909Host Interactions of HIV factors
R-HSA-1643685Disease
R-HSA-164938Nef-mediates down modulation of cell surface receptors by recruiting them to clathrin adapters
R-HSA-164952The role of Nef in HIV-1 replication and disease pathogenesis
R-HSA-168256Immune System
R-HSA-199977ER to Golgi Anterograde Transport
R-HSA-199991Membrane Trafficking
R-HSA-382551Transport of small molecules
R-HSA-392499Metabolism of proteins
R-HSA-446203Asparagine N-linked glycosylation
R-HSA-447115Interleukin-12 family signaling
R-HSA-449147Signaling by Interleukins

MSigDB gene sets: 358 (showing top): GOBP_MITOTIC_CYTOKINESIS, GOBP_CELLULAR_RESPONSE_TO_VIRUS, REACTOME_ADAPTIVE_IMMUNE_SYSTEM, GOBP_INTRACELLULAR_PROTEIN_TRANSPORT, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, GOBP_REGULATION_OF_ACTIN_NUCLEATION, HSIAO_HOUSEKEEPING_GENES, KYNG_DNA_DAMAGE_DN, REACTOME_THE_ROLE_OF_NEF_IN_HIV_1_REPLICATION_AND_DISEASE_PATHOGENESIS, GOBP_VESICLE_MEDIATED_TRANSPORT, REACTOME_MEMBRANE_TRAFFICKING, CACCAGC_MIR138, CTATGCA_MIR153, GOBP_CYTOKINETIC_PROCESS, YY1_Q6

GO Biological Process (10): regulation of receptor internalization (GO:0002090), intracellular copper ion homeostasis (GO:0006878), intracellular protein transport (GO:0006886), vesicle-mediated transport (GO:0016192), regulation of Arp2/3 complex-mediated actin nucleation (GO:0034315), long-term synaptic depression (GO:0060292), dendritic spine organization (GO:0097061), cellular response to virus (GO:0098586), mitotic cleavage furrow ingression (GO:1990386), protein transport (GO:0015031)

GO Molecular Function (9): magnesium ion binding (GO:0000287), RNA binding (GO:0003723), GTPase activity (GO:0003924), G protein activity (GO:0003925), GTP binding (GO:0005525), protein domain specific binding (GO:0019904), nucleotide binding (GO:0000166), protein binding (GO:0005515), hydrolase activity (GO:0016787)

GO Cellular Component (15): Golgi membrane (GO:0000139), cytoplasm (GO:0005737), cytosol (GO:0005829), plasma membrane (GO:0005886), focal adhesion (GO:0005925), postsynaptic density (GO:0014069), sarcomere (GO:0030017), cell leading edge (GO:0031252), protein-containing complex (GO:0032991), neuron projection (GO:0043005), extracellular exosome (GO:0070062), Golgi apparatus (GO:0005794), endomembrane system (GO:0012505), membrane (GO:0016020), synapse (GO:0045202)

Reactome top-level categories

Rollup of top-15 pathways:

CategoryPathways
PI Metabolism2
trans-Golgi Network Vesicle Budding2
Immune System2
Nef-mediates down modulation of cell surface receptors by recruiting them to clathrin adapters1
Membrane Trafficking1
Adaptive Immune System1
ER to Golgi Anterograde Transport1
Golgi-to-ER retrograde transport1
Intra-Golgi and retrograde Golgi-to-ER traffic1
Interleukin-12 signaling1
Transport of small molecules1
Phospholipid metabolism1
Metabolism of lipids1
Viral Infection Pathways1
HIV Infection1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
cellular anatomical structure6
intracellular protein localization2
transport2
cytoplasm2
receptor internalization1
regulation of receptor-mediated endocytosis1
intracellular monoatomic cation homeostasis1
copper ion homeostasis1
protein transport1
intracellular transport1
cellular process1
Arp2/3 complex-mediated actin nucleation1
regulation of actin nucleation1
regulation of synaptic plasticity1
negative regulation of synaptic transmission1
postsynapse organization1
neuron projection organization1
response to virus1
cleavage furrow ingression1
mitotic cytokinetic process1
establishment of protein localization1
metal ion binding1
nucleic acid binding1
ribonucleoside triphosphate phosphatase activity1
GTPase activity1
molecular function regulator activity1
guanyl ribonucleotide binding1
purine ribonucleoside triphosphate binding1
protein binding1
nucleoside phosphate binding1
heterocyclic compound binding1
binding1
catalytic activity1
Golgi apparatus1
bounding membrane of organelle1
intracellular anatomical structure1
membrane1
cell periphery1
cell-substrate junction1
asymmetric synapse1

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

127 interactions, top by confidence:

ABTypeScore
AP1B1Ap1g1psi-mi:“MI:0915”(physical association)0.740
LYRM2NDUFAB1psi-mi:“MI:0914”(association)0.730
ARF1CYTH2psi-mi:“MI:0407”(direct interaction)0.720
CYTH2ARF1psi-mi:“MI:0915”(physical association)0.720
CFTRESYT2psi-mi:“MI:2364”(proximity)0.710
LRIF1SMCHD1psi-mi:“MI:0914”(association)0.680
Ap1g1Ap1m1psi-mi:“MI:0914”(association)0.660
LYRM7NDUFAB1psi-mi:“MI:0914”(association)0.640
ARF1ARFIP2psi-mi:“MI:0915”(physical association)0.620
ARF1ARFIP2psi-mi:“MI:0914”(association)0.620
RAB8AWDR91psi-mi:“MI:0914”(association)0.600
ARF5ARF4psi-mi:“MI:0914”(association)0.530
VCAM1PSMD11psi-mi:“MI:0914”(association)0.530
ARF1ARFIP1psi-mi:“MI:0915”(physical association)0.520
ARFIP1ARF1psi-mi:“MI:0915”(physical association)0.520
SNAP25ARF1psi-mi:“MI:0914”(association)0.510
ARF1SNAP25psi-mi:“MI:0914”(association)0.510
SNAP25ARF1psi-mi:“MI:0403”(colocalization)0.510
NRASESYT2psi-mi:“MI:2364”(proximity)0.480
AP3D1psi-mi:“MI:0914”(association)0.460
MYL12Bpsi-mi:“MI:0914”(association)0.460

BioGRID (358): ARF1 (Affinity Capture-MS), ARF1 (Reconstituted Complex), ARF1 (Reconstituted Complex), ARF1 (Reconstituted Complex), ARF1 (Affinity Capture-MS), ARF1 (Affinity Capture-RNA), ACADM (Co-fractionation), AHSA1 (Co-fractionation), ARF1 (Co-fractionation), ARF1 (Co-fractionation), ARF4 (Co-fractionation), ARF5 (Co-fractionation), ARFGAP1 (Co-fractionation), ARFGAP2 (Co-fractionation), ARFGAP3 (Co-fractionation)

ESM2 similar proteins: O00909, O23778, O48649, O48920, P0CM16, P0CM17, P0DH91, P11076, P18085, P19146, P22274, P36397, P36579, P49076, P49702, P51643, P51644, P51821, P51822, P51823, P61204, P61205, P61206, P61207, P61750, P61751, P84077, P84078, P84079, P84080, P84081, P84082, P84083, P84084, P84085, P91924, Q06396, Q10943, Q25761, Q3SZF2

Diamond homologs: A1CRG9, A1D4D1, A3LTA2, A5DR82, A5E5G3, A8ISN6, O04266, O04267, O04834, O45379, O48649, O48920, P0C583, P0C950, P0C951, P0CM16, P0CM17, P0CR30, P0CR31, P0CT16, P0CT17, P0DH91, P11076, P18085, P19146, P20606, P22274, P34727, P36397, P36536, P36579, P38116, P40940, P40945, P40994, P49702, P51643, P51821, P51823, P51824

SIGNOR signaling

6 interactions.

AEffectBMechanism
ARFGEF1“up-regulates activity”ARF1“guanine nucleotide exchange factor”
ARF1“up-regulates quantity”“AP-4 Adaptor complex”binding
ARFGAP1“up-regulates activity”ARF1“gtpase-activating protein”
ASAP2“up-regulates activity”ARF1“gtpase-activating protein”
ARF1up-regulatesVesicle_transport
GBF1“up-regulates activity”ARF1“guanine nucleotide exchange factor”

Enriched among interaction partners

Reactome pathways and GO biological processes over-represented among this gene’s 125 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.

Reactome pathways:

PathwayPartnersFoldFDR
Regulation of RAS by GAPs613.7×3e-03
Mitochondrial protein import611.8×3e-03

GO biological processes:

GO termPartnersFoldFDR
intracellular protein transport117.2×3e-04

Disease & clinical

Clinical variants and AI predictions

ClinVar

45 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic7
Likely pathogenic5
Uncertain significance18
Likely benign5
Benign1

Top pathogenic / likely-pathogenic (12)

Variant IDHGVSClassification
1343798NM_001658.4(ARF1):c.153C>A (p.Phe51Leu)Pathogenic
1343799NM_001658.4(ARF1):c.392C>G (p.Pro131Arg)Pathogenic
1343803NM_001658.4(ARF1):c.151T>C (p.Phe51Leu)Pathogenic
3247647NC_000001.10:g.(?228194830)(228566496_?)delPathogenic
3253556NM_001658.4(ARF1):c.202G>A (p.Val68Met)Pathogenic
590332NM_001658.4(ARF1):c.103T>C (p.Tyr35His)Pathogenic
590333NM_001658.4(ARF1):c.379A>G (p.Lys127Glu)Pathogenic
1343801NM_001658.4(ARF1):c.55C>T (p.Arg19Cys)Likely pathogenic
1343805NM_001658.4(ARF1):c.295C>T (p.Arg99Cys)Likely pathogenic
3420237NM_001658.4(ARF1):c.208G>A (p.Gly70Ser)Likely pathogenic
565231GRCh37/hg19 1q42.13(chr1:227696109-229152386)x3Likely pathogenic
690284NM_001658.4(ARF1):c.143C>T (p.Thr48Ile)Likely pathogenic

SpliceAI

652 predictions. Top by Δscore:

VariantEffectΔscore
1:228082762:TGAGG:Tdonor_loss1.0000
1:228082763:GAGGT:Gdonor_loss1.0000
1:228082764:AGG:Adonor_loss1.0000
1:228082766:GTGA:Gdonor_loss1.0000
1:228082767:T:Gdonor_loss1.0000
1:228097074:CCAG:Cacceptor_loss1.0000
1:228097075:CAG:Cacceptor_loss1.0000
1:228097077:GGT:Gacceptor_gain1.0000
1:228097201:G:Tdonor_gain1.0000
1:228097228:GCTGG:Gdonor_gain1.0000
1:228097229:C:Gdonor_gain1.0000
1:228097333:C:CAacceptor_gain1.0000
1:228097336:A:AGacceptor_gain1.0000
1:228097337:C:Gacceptor_gain1.0000
1:228097338:CCAG:Cacceptor_loss1.0000
1:228097339:CAGG:Cacceptor_loss1.0000
1:228097340:A:AGacceptor_gain1.0000
1:228097340:AG:Aacceptor_gain1.0000
1:228097341:G:GTacceptor_gain1.0000
1:228097341:GG:Gacceptor_gain1.0000
1:228097341:GGC:Gacceptor_gain1.0000
1:228097341:GGCT:Gacceptor_gain1.0000
1:228097341:GGCTT:Gacceptor_gain1.0000
1:228097448:ACAAG:Adonor_gain1.0000
1:228097449:CAAG:Cdonor_gain1.0000
1:228097449:CAAGG:Cdonor_loss1.0000
1:228097450:AAG:Adonor_gain1.0000
1:228097450:AAGGT:Adonor_loss1.0000
1:228097451:AG:Adonor_gain1.0000
1:228097451:AGGT:Adonor_loss1.0000

AlphaMissense

1202 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
1:228097176:T:AL21H1.000
1:228097179:T:GM22R1.000
1:228097184:G:CG24R1.000
1:228097184:G:TG24C1.000
1:228097185:G:AG24D1.000
1:228097185:G:TG24V1.000
1:228097190:G:CD26H1.000
1:228097191:A:TD26V1.000
1:228097193:G:CA27P1.000
1:228097199:G:AG29R1.000
1:228097199:G:CG29R1.000
1:228097199:G:TG29W1.000
1:228097200:G:AG29E1.000
1:228097200:G:TG29V1.000
1:228097202:A:CK30Q1.000
1:228097203:A:TK30M1.000
1:228097204:G:CK30N1.000
1:228097204:G:TK30N1.000
1:228097206:C:TT31I1.000
1:228097215:T:AL34H1.000
1:228097215:T:CL34P1.000
1:228097224:T:CL37P1.000
1:228097251:T:AI46N1.000
1:228097254:C:AP47H1.000
1:228097257:C:TT48I1.000
1:228097260:T:AI49K1.000
1:228097262:G:CG50R1.000
1:228097262:G:TG50C1.000
1:228097342:G:AG50D1.000
1:228097342:G:TG50V1.000

dbSNP variants (sampled 300 via entrez): RS1000058274 (1:228095281 T>G), RS1000405693 (1:228087207 G>A), RS1000671194 (1:228097498 A>C,G), RS1000928049 (1:228083818 C>G,T), RS1001000239 (1:228084113 C>A), RS1001279337 (1:228089774 G>A,T), RS1001336255 (1:228095029 G>C), RS1001471519 (1:228095161 C>A), RS1001965314 (1:228080827 T>C), RS1002027266 (1:228085682 A>G), RS1002081202 (1:228085970 C>T), RS1002215324 (1:228089061 A>G), RS1002329854 (1:228089415 G>A,T), RS1002341935 (1:228096040 C>T), RS1002657090 (1:228083363 G>T)

Disease associations

OMIM: gene MIM:103180 | disease phenotypes: MIM:618185, MIM:615330, MIM:616451, MIM:118220

GenCC curated gene-disease

DiseaseClassificationInheritance
periventricular nodular heterotopiaDefinitiveAutosomal dominant
periventricular nodular heterotopia 8StrongAutosomal dominant

ClinGen Gene-Disease Validity (1)

Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.

DiseaseClassificationInheritance
periventricular nodular heterotopiaDefinitiveAD

Mondo (5): periventricular nodular heterotopia 8 (MONDO:0032588), multiple mitochondrial dysfunctions syndrome 3 (MONDO:0014132), hereditary spastic paraplegia 74 (MONDO:0014644), Charcot-Marie-Tooth disease (MONDO:0015626), periventricular nodular heterotopia (MONDO:0020341)

Orphanet (3): Multiple mitochondrial dysfunctions syndrome type 3 (Orphanet:363424), Autosomal recessive spastic paraplegia type 74 (Orphanet:468661), Charcot-Marie-Tooth disease/Hereditary motor and sensory neuropathy (Orphanet:166)

HPO phenotypes

25 total (25 of 25 shown, HPO-id order):

HPOTerm
HP:0000006Autosomal dominant inheritance
HP:0000750Delayed speech and language development
HP:0000963Thin skin
HP:0001250Seizure
HP:0001257Spasticity
HP:0001263Global developmental delay
HP:0001382Joint hypermobility
HP:0001643Patent ductus arteriosus
HP:0001654Abnormal heart valve morphology
HP:0001659Aortic regurgitation
HP:0001892Abnormal bleeding
HP:0002020Gastroesophageal reflux
HP:0002021Pyloric stenosis
HP:0002188Delayed CNS myelination
HP:0002650Scoliosis
HP:0002999Patellar dislocation
HP:0003834Shoulder dislocation
HP:0004942Aortic aneurysm
HP:0006855Cerebellar vermis atrophy
HP:0007165Periventricular heterotopia
HP:0007359Focal-onset seizure
HP:0012639Abnormal nervous system morphology
HP:0032388Periventricular nodular heterotopia
HP:0034295Reduced cerebral white matter volume
HP:0100790Hernia

GWAS associations

2 associations (top):

StudyTraitp-value
GCST008788_4Adolescent idiopathic scoliosis7.000000e-11
GCST008789_3Adolescent idiopathic scoliosis2.000000e-10

MeSH disease descriptors (2)

DescriptorNameTree numbers
D002607Charcot-Marie-Tooth DiseaseC10.500.300.200; C10.574.500.495.200; C10.668.829.800.300.200; C16.131.666.300.200; C16.320.400.375.200
D054091Periventricular Nodular HeterotopiaC10.500.507.450.750; C16.131.666.507.450.750

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL5985 (SINGLE PROTEIN)

PharmGKB: 1 entry (VIP=true, CPIC=false)

PharmGKB variants

1 variants.

VariantGenesLevelScore#Clin annotsDrugs
rs11541557ARF10.000

ChEMBL bioactivities

1 potent at pChembl≥5 of 1 total, top 1 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
6.21Kd620nMCHEMBL259181

PubChem BioAssay actives

1 with measured affinity, of 4 total; 1 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
(2S)-2-[[2-(2,3-dihydro-1H-inden-5-yloxy)-9-[(4-phenylphenyl)methyl]purin-6-yl]amino]-3-phenylpropan-1-ol318398: Binding affinity to ADP-ribosylation factor 1 expressed HEK293 cells by surface plasmon resonance analysiskd0.6200uM

CTD chemical–gene interactions

53 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Valproic Acidaffects cotreatment, increases expression3
sodium arseniteaffects binding, increases reaction, increases expression2
Arsenicaffects methylation, decreases expression, increases abundance2
Copperincreases abundance, decreases abundance, decreases uptake, affects binding, increases expression (+2 more)2
Cyclosporineincreases expression2
p-Chloromercuribenzoic Acidaffects cotreatment, increases expression2
Particulate Matteraffects cotreatment, increases abundance, increases expression, decreases expression2
bisphenol Faffects cotreatment, decreases expression1
triphenyl phosphateaffects expression1
bisphenol Aaffects expression1
sodium arsenatedecreases expression, increases abundance1
trichostatin Aincreases expression1
ochratoxin Aaffects binding1
ochratoxin Baffects binding1
CD 437decreases expression1
K 7174decreases expression1
4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamideaffects cotreatment, increases expression1
3-(4’-hydroxy-3’-adamantylbiphenyl-4-yl)acrylic aciddecreases expression1
dorsomorphinaffects cotreatment, increases expression1
LM11 compounddecreases activity1
NSC 689534affects binding, increases expression1
Erlotinib Hydrochloridedecreases response to substance1
Irinotecanaffects cotreatment, affects response to substance, decreases expression1
Temozolomideaffects response to substance1
Arsenic Trioxideincreases expression1
Gemcitabinedecreases expression1
Ethanolaffects cotreatment, increases abundance, increases expression1
Benzo(a)pyrenedecreases methylation1
Cadmiumincreases expression1
Carmustineaffects response to substance1

ChEMBL screening assays

4 unique, capped per target: 4 binding

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL5118449BindingBinding affinity to Arf1 in human HepG2 cell lysate assessed as change in denaturation temperature at 25 uM measured after 3 mins by CETSANew brefeldin A-cinnamic acid ester derivatives as potential antitumor agents: Design, synthesis and biological evaluation. — Eur J Med Chem

Cellosaurus cell lines

3 cell lines: 3 cancer cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_B1JVAbcam HeLa ARF1 KOCancer cell lineFemale
CVCL_SD25HAP1 ARF1 (-) 1Cancer cell lineMale
CVCL_SD26HAP1 ARF1 (-) 2Cancer cell lineMale

Clinical trials (associated diseases)

60 trials via MONDO — disease-level, not drug-specific.

TrialPhaseStatusTitle
NCT04762758PHASE3UNKNOWNPhase III Trial Assessing the Efficacy and Safety of PXT3003 in CMT1A Patients
NCT00271635PHASE2COMPLETEDAscorbic Acid Treatment in CMT1A Trial (AATIC)
NCT01401257PHASE2COMPLETEDPhase II, Randomized, Placebo-controlled Trial in Patients With Charcot-marie-tooth Disease Type 1A
NCT02561702PHASE2COMPLETEDMexiletine for Muscle Cramps in Charcot Marie Tooth Disease
NCT02967679PHASE2COMPLETEDSERENDEM : MD1003 in Patients Suffering From Demyelinating Neuropathies, an Open Label Pilot Study
NCT03124459PHASE2TERMINATEDStudy of ACE-083 in Patients With Charcot-Marie-Tooth Disease
NCT03254199PHASE2TERMINATEDA Study to Assess the Safety and Effectiveness of FLX-787 in Subjects With Charcot-Marie-Tooth Disease Experiencing Muscle Cramps.
NCT03943290PHASE2TERMINATEDExtension Study to Evaluate the Long-Term Effects of ACE-083 in Patients With Facioscapulohumeral Muscular Dystrophy (FSHD) and Charcot-Marie Tooth (CMT) Disease Types 1 and X (CMT1 and CMTX)
NCT05777226PHASE2UNKNOWNResearch of SORD-CMT Natural History and Epalrestat Treatment
NCT06482437PHASE2COMPLETEDSafety and Efficacy of NMD670 in Adult Patients With Type 1 and Type 2 Charcot-Marie-Tooth Disease
NCT05696912Not specifiedUNKNOWNFunctional Tests to Resolve Unsolved Rare Diseases. Rares.
NCT01289704PHASE2/PHASE3UNKNOWNTreadmill, Stretching and Proprioceptive Exercise (TreSPE) Rehabilitation Program for Charcot-Marie-Tooth Neuropathy Type 1A (CMT1A)
NCT00541164PHASE1/PHASE2COMPLETEDEffects of Coenzyme Q10 on Charcot-Marie-Tooth Disease
NCT05361031PHASE1/PHASE2COMPLETEDThe Safety and Tolerability of Engensis (VM202) in Patients With Charcot-Marie-Tooth Disease Subtype 1A (CMT1A)
NCT07223632PHASE1/PHASE2ACTIVE_NOT_RECRUITINGTreatment of Charcot-Marie-Tooth Disease, Axonal, Type 2S (CMT2S) in an Individual Patient
NCT00149045Not specifiedCOMPLETEDFollow up and Observation of Charcot Marie Tooth Disease in Families
NCT01193075Not specifiedRECRUITINGNatural History Evaluation of Charcot Marie Tooth Disease (CMT) Types CMT1B, CMT2A, CMT4A, CMT4C, and Others
NCT01203085Not specifiedCOMPLETEDDevelopment of Charcot Marie Tooth Disease (CMT) Pediatric Scale for Children With CMT
NCT01455623Not specifiedCOMPLETEDDevelopment and Validation of a Disability Severity Index for CMT
NCT01918826Not specifiedUNKNOWNEvaluation of the Analgesic Efficiency of the Transcutaneous Neurostimulation in the Charcot Syndrome Marie Tooth on the Pains of Lower Limbs
NCT02001038Not specifiedCOMPLETEDSurvey of Current Management of Orthopaedic Complications in CMT Patients
NCT02011204Not specifiedCOMPLETEDStudy of Electrical Impedance Myography (EIM) in ALS
NCT02194010Not specifiedCOMPLETEDDisability Severity Scale (DSI) and Hereditary Motor and Sensory Neuropathy Overall Disability Scale (HMSN-R-ODS)
NCT02429947Not specifiedCOMPLETEDAn Analysis of the Symptomatic Domains Most Relevant to Charcot Marie Tooth Neuropathy (CMT) Patients
NCT02532244Not specifiedCOMPLETEDGenetics of Pediatric-Onset Motor Neuron and Neuromuscular Diseases
NCT02699190Not specifiedCOMPLETEDLeukoSEQ: Whole Genome Sequencing as a First-Line Diagnostic Tool for Leukodystrophies
NCT02788734Not specifiedCOMPLETEDPatient Reported Outcomes Measures (PROM) in Carpal Tunnel Therapies in Patients With Inherited Neuropathies
NCT02979145Not specifiedUNKNOWNCharcot-Marie-Tooth Disease (CMT) Infant Scale (INC-6611)
NCT03047369Not specifiedRECRUITINGThe Myelin Disorders Biorepository Project
NCT03460951Not specifiedCOMPLETEDDiffusion Tensor Imaging in Chronic Inflammatory Demyelinating Polyneuropathy (PIDC)
NCT03715283Not specifiedCOMPLETEDChange in MUNIX in Patients With CMT1A Undergoing a Home Ankle Strengthening Program Versus Standard of Care
NCT03782883Not specifiedCOMPLETEDThe Impact of Charcot-Marie-Tooth Disease in the Real World
NCT03810508Not specifiedTERMINATEDA Natural History Study of Charcot-Marie-Tooth 4J (CMT4J)
NCT03966287Not specifiedCOMPLETEDAnalysis of Pain and Quality of Life in Patients With Charcot-Marie-Tooth Neuropathy (CMT)
NCT04010188Not specifiedRECRUITINGA Registered Cohort Study on Charcot-Marie-Tooth Disease
NCT04283175Not specifiedCOMPLETEDValidation Study of Posturology Platforms for Evaluating Postural Control of Hemiparetic and Neuro-muscular Patients
NCT04461613Not specifiedUNKNOWNPhysical Activity in Persons With Charcot-Marie-Tooth: Developing a Measurement Instrument
NCT04786522Not specifiedCOMPLETEDIrisin Levels in Patients With Charcot-Marie-Tooth (CMT) Disease
NCT04967716Not specifiedUNKNOWNGenetics of Charcot-Marie-Tooth Dystrophy and Related Diseases
NCT04980807Not specifiedCOMPLETEDObservational Study of Neuromuscular Function in CMT Type 1&2 and Healthy Controls