ARG1
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Summary
ARG1 (arginase 1, HGNC:663) is a protein-coding gene on chromosome 6q23.2, encoding Arginase-1 (P05089). Key element of the urea cycle converting L-arginine to urea and L-ornithine, which is further metabolized into metabolites proline and polyamides that drive collagen synthesis and bioenergetic pathways critical for cell proliferation, respectively; the urea cycle takes place pri….
Arginase catalyzes the hydrolysis of arginine to ornithine and urea. At least two isoforms of mammalian arginase exist (types I and II) which differ in their tissue distribution, subcellular localization, immunologic crossreactivity and physiologic function. The type I isoform encoded by this gene, is a cytosolic enzyme and expressed predominantly in the liver as a component of the urea cycle. Inherited deficiency of this enzyme results in argininemia, an autosomal recessive disorder characterized by hyperammonemia. Two transcript variants encoding different isoforms have been found for this gene.
Source: NCBI Gene 383 — RefSeq curated summary.
At a glance
- Gene–disease (curated): arginase deficiency (Definitive, ClinGen)
- GWAS associations: 20
- Clinical variants (ClinVar): 531 total — 63 pathogenic, 47 likely-pathogenic
- Phenotypes (HPO): 31
- Druggable target: yes — 2 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_000045
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:663 |
| Approved symbol | ARG1 |
| Name | arginase 1 |
| Location | 6q23.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000118520 |
| Ensembl biotype | protein_coding |
| OMIM | 608313 |
| Entrez | 383 |
Gene structure
Transcript identifiers
Ensembl transcripts: 17 — 11 protein_coding, 4 retained_intron, 1 protein_coding_CDS_not_defined, 1 nonsense_mediated_decay
ENST00000275196, ENST00000356962, ENST00000368087, ENST00000469293, ENST00000484820, ENST00000498260, ENST00000672052, ENST00000672233, ENST00000673234, ENST00000673427, ENST00000875750, ENST00000875751, ENST00000875752, ENST00000875753, ENST00000875754, ENST00000875755, ENST00000875756
RefSeq mRNA: 3 — MANE Select: NM_000045
NM_000045, NM_001244438, NM_001369020
CCDS: CCDS5145, CCDS59038, CCDS94002
Canonical transcript exons
ENST00000368087 — 8 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000798683 | 131583355 | 131583491 |
| ENSE00001873351 | 131573226 | 131573339 |
| ENSE00003493535 | 131576663 | 131576735 |
| ENSE00003566196 | 131579111 | 131579285 |
| ENSE00003588412 | 131581219 | 131581378 |
| ENSE00003651378 | 131582621 | 131582715 |
| ENSE00003677626 | 131583060 | 131583164 |
| ENSE00003894295 | 131583742 | 131584329 |
Expression profiles
Bgee: expression breadth ubiquitous, 194 present calls, max score 99.42.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 6.9918 / max 1881.2772, expressed in 135 samples.
FANTOM5 promoters (1 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 69788 | 6.9918 | 135 |
Top tissues by expression
289 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right lobe of liver | UBERON:0001114 | 99.42 | gold quality |
| liver | UBERON:0002107 | 99.40 | gold quality |
| penis | UBERON:0000989 | 99.07 | gold quality |
| upper arm skin | UBERON:0004263 | 98.65 | gold quality |
| trabecular bone tissue | UBERON:0002483 | 98.05 | gold quality |
| bone marrow | UBERON:0002371 | 97.71 | gold quality |
| mammalian vulva | UBERON:0000997 | 97.31 | gold quality |
| bone marrow cell | CL:0002092 | 95.97 | gold quality |
| skin of leg | UBERON:0001511 | 95.15 | gold quality |
| zone of skin | UBERON:0000014 | 93.61 | gold quality |
| skin of hip | UBERON:0001554 | 92.03 | gold quality |
| skin of abdomen | UBERON:0001416 | 91.71 | gold quality |
| blood | UBERON:0000178 | 86.49 | gold quality |
| right lung | UBERON:0002167 | 84.19 | gold quality |
| spleen | UBERON:0002106 | 83.07 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 82.96 | gold quality |
| monocyte | CL:0000576 | 81.29 | gold quality |
| mononuclear cell | CL:0000842 | 80.89 | gold quality |
| leukocyte | CL:0000738 | 80.27 | gold quality |
| tongue squamous epithelium | UBERON:0006919 | 79.56 | silver quality |
| nipple | UBERON:0002030 | 78.83 | gold quality |
| upper leg skin | UBERON:0004262 | 77.20 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 75.76 | gold quality |
| left uterine tube | UBERON:0001303 | 74.47 | gold quality |
| upper lobe of lung | UBERON:0008948 | 74.44 | gold quality |
| gingival epithelium | UBERON:0001949 | 70.90 | gold quality |
| adrenal tissue | UBERON:0018303 | 70.83 | gold quality |
| granulocyte | CL:0000094 | 70.68 | gold quality |
| decidua | UBERON:0002450 | 70.65 | silver quality |
| lower esophagus mucosa | UBERON:0035834 | 69.81 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-9801 | yes | 4693.65 |
| E-MTAB-10553 | yes | 38.52 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
39 targeting ARG1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-3692-3P | 99.98 | 70.27 | 2139 |
| HSA-MIR-3148 | 99.97 | 75.06 | 6478 |
| HSA-MIR-3658 | 99.96 | 73.87 | 4379 |
| HSA-MIR-218-5P | 99.93 | 72.22 | 2103 |
| HSA-MIR-4753-3P | 99.90 | 71.03 | 3786 |
| HSA-MIR-153-5P | 99.89 | 73.86 | 6317 |
| HSA-MIR-576-5P | 99.84 | 70.46 | 2582 |
| HSA-MIR-130B-5P | 99.83 | 68.50 | 1888 |
| HSA-MIR-4766-5P | 99.75 | 69.23 | 2662 |
| HSA-MIR-142-5P | 99.48 | 70.92 | 2416 |
| HSA-MIR-5590-3P | 99.48 | 70.91 | 2429 |
| HSA-MIR-6083 | 99.47 | 68.73 | 2393 |
| HSA-MIR-208A-5P | 99.42 | 70.83 | 1913 |
| HSA-MIR-208B-5P | 99.42 | 70.83 | 1952 |
| HSA-MIR-4480 | 99.42 | 66.02 | 735 |
| HSA-MIR-513A-3P | 99.39 | 70.63 | 3620 |
| HSA-MIR-513C-3P | 99.39 | 70.63 | 3620 |
| HSA-MIR-1276 | 99.36 | 68.18 | 1642 |
| HSA-MIR-6882-5P | 99.35 | 71.13 | 1206 |
| HSA-MIR-4311 | 99.31 | 70.47 | 3041 |
| HSA-MIR-3160-5P | 99.28 | 69.07 | 1938 |
| HSA-MIR-1264 | 99.25 | 66.81 | 1317 |
| HSA-MIR-4263 | 99.18 | 69.25 | 2236 |
| HSA-MIR-3606-3P | 99.11 | 69.84 | 3254 |
| HSA-MIR-6846-5P | 98.81 | 65.86 | 1121 |
| HSA-MIR-6848-5P | 98.81 | 65.49 | 1126 |
| HSA-MIR-583 | 98.71 | 67.44 | 1791 |
| HSA-MIR-4720-3P | 98.50 | 68.88 | 988 |
Literature-anchored findings (GeneRIF, showing 40)
- crystal structure: arginase-boronic acid complex highlights a physiological role in erectile function (PMID:10542097)
- Arginase I is induced in human monocytes after trauma. (PMID:11224628)
- Anti-CYP2D6 antibodies detected by quantitative radioligand assay and relation to antibodies to liver-specific arginase in patients with autoimmune hepatitis. (PMID:11750286)
- gene expression in erythrocytes (PMID:12083807)
- Overexpression of arginase is associated with colorectal carcinoma and colorectal liver metastasis (PMID:12115381)
- the interaction of human liver arginase with tightly and weakly bound manganese ions by chemical modification and site-directed mutagenesis, weakly bound metal ion is needed only for conversion of active species (PMID:12139964)
- Increased plasma arginase I due to hemolysis reduces plasma arginine and contributes to pulmonary hypertension in sickle cell disease. (PMID:15998894)
- Lung tissue from patients with IPF showed increased expression of arginase I. These results suggest that virus-induced upregulation of arginase I could be a mechanism driving lung fibrogenesis. (PMID:16709958)
- Differentiation of cytotrophoblasts into syncytiotrophoblasts may be associated with l-arginine metabolism through modulation of l-arginine availability for eNOS and A-I. (PMID:16720041)
- The results showed that flotillin-1 can interact with arginase1, and hence arginase activity was up-regulated by 26.8%. (PMID:17113085)
- activated neutrophils coreleased ARG1 and gelatinase to the extracellular environment (PMID:17119118)
- prostaglandin E(2) produced by the tumor induces arginase I expression in myeloid-derived suppressor cells [review] (PMID:17255300)
- Arginase is up-regulated with hypertension. (PMID:17347269)
- ARG1 polymorphizm is consistently associated with myocardial infarct and an increased common carotid intima media thickness. (PMID:17369504)
- Crystal structure of human arginase I (PMID:17469833)
- Arginase-1 is expressed and functionally important for collagen deposition in lung fibroblasts. (PMID:17934065)
- Increased capacity to upregulate arginase in younger individuals results in a more permissive environment for parasite growth, increased disease severity and pathology. (PMID:18478052)
- ARG1 (arginase 1) is a novel gene for acute brochodilator response in both children and adults with asthma. (PMID:18617639)
- The S-shaped motif of Arg1 is suggested as essential for the cooperative response of the enzyme to l-arginine at pH 7.5. (PMID:18957279)
- Case Report: report blood/CSF amino acid levels in an infant with arginase1 deficiency, who presented unusually early with hyperammonaemia. (PMID:19052914)
- Preoperative L-arginine concentration in the patient groups was 2-fold higher, whereas arginase activity was over 3- and 6-fold higher in colorectal cancer and colorectal cancer liver metastasis when compared with control. (PMID:19101531)
- Over-expression of arginase I is associated with hepatocarcinogenesis. (PMID:19253371)
- ARG1 and ARG2 loci are associated with childhood asthma. The association between ARG1 variation and asthma might depend on atopy and ambient ozone levels. (PMID:19281908)
- Increase in arginase activity is associated with carcinoma of the gallbladder. (PMID:19282757)
- Expression of ARG1 was increased in human asthma, whereas ARG2, NOS isoforms, and the other l-arginine-related proteins (i.e., cationic amino acid transporters 1 and 2, agmatinase, and ornithine decarboxylase) were unchanged (PMID:19286931)
- show that ischemia markedly potentiated the expression of arginase-1, and also induced the SOD2 in the wound tissue. (PMID:19293328)
- These data support the role of ARG1 in vascular pathophysiology, but the functional mutations remain to be identified. (PMID:19303401)
- Increased ARG1 plasma levels are associated with nonsmall cell lung cancer. (PMID:19431148)
- This review discusses the two arginase isoforms expressed in mammals: arginase I (cytosolic) and arginase II (mitochondrial), products of distinct genes located on different chromosomes and regulated independently. (PMID:19508396)
- Arginase AI activity and its mRNA level were significantly decreased in cirrhotic liver, whereas the activity and expression of arginase AII were concurrently raised, as compared to normal liver. (PMID:19636440)
- Increased arginase expression in preeclampsia can induce uncoupling of NOS as a source of superoxide in the maternal vasculature in preeclampsia. (PMID:19684035)
- Methylglyoxal-induced LOX-1 expression is mediated via arginase upregulation likely because of uncoupling of NO synthase, which may have implications in preeclampsia. (PMID:19687346)
- Extracellular activation of arginase-1 decreases enterocyte inducible nitric oxide synthase activity during systemic inflammation. (PMID:19713467)
- These data support our hypothesis that hypoxia increases proliferation of human pulmonary artery smooth muscle cells through the induction of arginase II. (PMID:19801451)
- ARG1 mutation is expected to result in complete loss-of-function of the arginase enzyme and therefore is the mostly likely cause of argininemia in this family (PMID:19936428)
- Embryonic stem cell arginase I activity plays a role in the attenuation of maternal T cell activation in the embryo’s microenvironment. (PMID:20032293)
- Association of ARG1 gene polymorphism is present in adult asthma, has lower reversibility specific with beta2 agonists. It is also associated with asthma severity, severe airway hyperresponsiveness, and less long-term response to inhaled corticosteroids. (PMID:20124949)
- Human arginase I is a binuclear manganese metalloenzyme that catalyzes the hydrolysis of L-arginine to generate L-ornithine and urea. (PMID:20153713)
- Loss of arginase is associated with allergic pulmonary inflammation. (PMID:20200399)
- Arg-1 is a sensitive and specific marker of hepatocytes and, as such, can be used to distinguish hepatocellular carcinomas from metastatic tumors in the liver. (PMID:20661013)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | arg1 | ENSDARG00000057429 |
| mus_musculus | Arg1 | ENSMUSG00000019987 |
| rattus_norvegicus | Arg1 | ENSRNOG00000013304 |
| drosophila_melanogaster | arg | FBGN0023535 |
Paralogs (2): ARG2 (ENSG00000081181), AGMAT (ENSG00000116771)
Protein
Protein identifiers
Arginase-1 — P05089 (reviewed: P05089)
Alternative names: Liver-type arginase, Type I arginase
All UniProt accessions (4): P05089, A0A5F9ZGN6, A0A5F9ZGY6, A0A5F9ZH78
UniProt curated annotations — full annotation on UniProt →
Function. Key element of the urea cycle converting L-arginine to urea and L-ornithine, which is further metabolized into metabolites proline and polyamides that drive collagen synthesis and bioenergetic pathways critical for cell proliferation, respectively; the urea cycle takes place primarily in the liver and, to a lesser extent, in the kidneys. Functions in L-arginine homeostasis in nonhepatic tissues characterized by the competition between nitric oxide synthase (NOS) and arginase for the available intracellular substrate arginine. Arginine metabolism is a critical regulator of innate and adaptive immune responses. Involved in an antimicrobial effector pathway in polymorphonuclear granulocytes (PMN). Upon PMN cell death is liberated from the phagolysosome and depletes arginine in the microenvironment leading to suppressed T cell and natural killer (NK) cell proliferation and cytokine secretion. In group 2 innate lymphoid cells (ILC2s) promotes acute type 2 inflammation in the lung and is involved in optimal ILC2 proliferation but not survival. In humans, the immunological role in the monocytic/macrophage/dendritic cell (DC) lineage is unsure.
Subunit / interactions. Homotrimer. Interacts with CMTM6.
Subcellular location. Cytoplasm. Cytoplasmic granule.
Tissue specificity. Within the immune system initially reported to be selectively expressed in granulocytes (polymorphonuclear leukocytes [PMNs]). Also detected in macrophages mycobacterial granulomas. Expressed in group2 innate lymphoid cells (ILC2s) during lung disease.
Disease relevance. Argininemia (ARGIN) [MIM:207800] A rare autosomal recessive disorder of the urea cycle. Arginine is elevated in the blood and cerebrospinal fluid, and periodic hyperammonemia occurs. Clinical manifestations include developmental delay, seizures, intellectual disability, hypotonia, ataxia and progressive spastic quadriplegia. The disease is caused by variants affecting the gene represented in this entry.
Cofactor. Binds 2 manganese ions per subunit.
Induction. By arginine or homoarginine.
Pathway. Nitrogen metabolism; urea cycle; L-ornithine and urea from L-arginine: step 1/1.
Miscellaneous. May be due to a competing acceptor splice site.
Similarity. Belongs to the arginase family.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P05089-1 | 1 | yes |
| P05089-2 | 2, Erythroid variant | |
| P05089-3 | 3 |
RefSeq proteins (3): NP_000036, NP_001231367, NP_001355949 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR006035 | Ureohydrolase | Family |
| IPR014033 | Arginase | Family |
| IPR020855 | Ureohydrolase_Mn_BS | Binding_site |
| IPR023696 | Ureohydrolase_dom_sf | Homologous_superfamily |
Pfam: PF00491
Enzyme classification (BRENDA):
- EC 3.5.3.1 — arginase (BRENDA: 62 organisms, 63 substrates, 320 inhibitors, 146 Km, 104 kcat entries)
Substrate kinetics (BRENDA)
11 substrates with measured Km, best-characterized 11. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| L-ARGININE | 0.02–171.9 | 120 |
| L-ARG | 0.69–130 | 14 |
| L-PHENYLALANINE | 22.1–57.5 | 3 |
| 1-NITRO-3-GUANIDINOBENZENE | 1.6 | 1 |
| 4-GUANIDINO-2-NITROPHENYLACETIC ACID | 0.01 | 1 |
| 4-GUANIDINO-3-NITROBENZOIC ACID | 0.007 | 1 |
| AGMATINE | 2.5 | 1 |
| L-CANAVANINE | 22.2 | 1 |
| L-THIOARGININE | 0.5 | 1 |
| S-(4-AMINOBUTYL)ISOTHIOUREA | 4 | 1 |
| THIOGUANIDINO-VALERIC ACID | 2.1 | 1 |
Catalyzed reactions (Rhea), 1 shown:
- L-arginine + H2O = urea + L-ornithine (RHEA:20569)
UniProt features (69 total): helix 18, binding site 13, strand 13, sequence variant 10, modified residue 6, sequence conflict 3, turn 3, splice variant 2, chain 1
Structure
Experimental structures (PDB)
60 structures, top 30 by resolution.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 2AEB | X-RAY DIFFRACTION | 1.29 |
| 4HWW | X-RAY DIFFRACTION | 1.3 |
| 3GMZ | X-RAY DIFFRACTION | 1.43 |
| 4HXQ | X-RAY DIFFRACTION | 1.45 |
| 3MFW | X-RAY DIFFRACTION | 1.47 |
| 4GSV | X-RAY DIFFRACTION | 1.48 |
| 3THJ | X-RAY DIFFRACTION | 1.5 |
| 6Q92 | X-RAY DIFFRACTION | 1.5 |
| 3DJ8 | X-RAY DIFFRACTION | 1.51 |
| 4GWD | X-RAY DIFFRACTION | 1.53 |
| 3KV2 | X-RAY DIFFRACTION | 1.55 |
| 3SJT | X-RAY DIFFRACTION | 1.6 |
| 3F80 | X-RAY DIFFRACTION | 1.6 |
| 6QAF | X-RAY DIFFRACTION | 1.61 |
| 3TF3 | X-RAY DIFFRACTION | 1.64 |
| 7K4H | X-RAY DIFFRACTION | 1.65 |
| 6Q9P | X-RAY DIFFRACTION | 1.66 |
| 2ZAV | X-RAY DIFFRACTION | 1.7 |
| 3GN0 | X-RAY DIFFRACTION | 1.7 |
| 4GSM | X-RAY DIFFRACTION | 1.7 |
| 3SKK | X-RAY DIFFRACTION | 1.7 |
| 3E6V | X-RAY DIFFRACTION | 1.72 |
| 6V7C | X-RAY DIFFRACTION | 1.8 |
| 7K4G | X-RAY DIFFRACTION | 1.8 |
| 7KLK | X-RAY DIFFRACTION | 1.8 |
| 4FCI | X-RAY DIFFRACTION | 1.82 |
| 6V7D | X-RAY DIFFRACTION | 1.82 |
| 8E5M | X-RAY DIFFRACTION | 1.84 |
| 3THH | X-RAY DIFFRACTION | 1.85 |
| 2PHA | X-RAY DIFFRACTION | 1.9 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P05089-F1 | 97.01 | 0.96 |
Antibody-complex structures (SAbDab): 6 — 7LEX, 7LEY, 7LEZ, 7LF0, 7LF1, 7LF2
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (13): 101; 232; 234; 246; 277; 124; 124; 126–130; 126; 128; 137–139; 183 …
Post-translational modifications (6): 17, 62, 72, 75, 163, 217
Function
Pathways and Gene Ontology
Reactome pathways
7 pathways
| ID | Pathway |
|---|---|
| R-HSA-6798695 | Neutrophil degranulation |
| R-HSA-70635 | Urea cycle |
| R-HSA-9956514 | ARG1 variants cause hyperargininemia |
| R-HSA-1430728 | Metabolism |
| R-HSA-168249 | Innate Immune System |
| R-HSA-168256 | Immune System |
| R-HSA-71291 | Metabolism of amino acids and derivatives |
MSigDB gene sets: 352 (showing top):
GOBP_REGULATION_OF_CELL_ACTIVATION, SHEPARD_BMYB_MORPHOLINO_UP, GOBP_REGULATION_OF_LEUKOCYTE_PROLIFERATION, REACTOME_INNATE_IMMUNE_SYSTEM, GOBP_NEGATIVE_REGULATION_OF_ADAPTIVE_IMMUNE_RESPONSE, MODULE_255, GOBP_RESPONSE_TO_PEPTIDE, GOCC_SECRETORY_GRANULE, GOBP_NEGATIVE_REGULATION_OF_LEUKOCYTE_PROLIFERATION, GOBP_REGULATION_OF_ADAPTIVE_IMMUNE_RESPONSE, GOBP_ALPHA_AMINO_ACID_METABOLIC_PROCESS, GOBP_NEGATIVE_REGULATION_OF_PRODUCTION_OF_MOLECULAR_MEDIATOR_OF_IMMUNE_RESPONSE, GOBP_NEGATIVE_REGULATION_OF_LEUKOCYTE_MEDIATED_IMMUNITY, GOBP_NEGATIVE_REGULATION_OF_CYTOKINE_PRODUCTION_INVOLVED_IN_IMMUNE_RESPONSE, GOBP_NEGATIVE_REGULATION_OF_INNATE_IMMUNE_RESPONSE
GO Biological Process (14): urea cycle (GO:0000050), adaptive immune response (GO:0002250), L-arginine catabolic process (GO:0006527), response to nematode (GO:0009624), negative regulation of T cell proliferation (GO:0042130), defense response to protozoan (GO:0042832), innate immune response (GO:0045087), negative regulation of activated T cell proliferation (GO:0046007), negative regulation of type II interferon-mediated signaling pathway (GO:0060336), positive regulation of neutrophil mediated killing of fungus (GO:0070965), negative regulation of T-helper 2 cell cytokine production (GO:2000552), immune system process (GO:0002376), arginine metabolic process (GO:0006525), regulation of cell population proliferation (GO:0042127)
GO Molecular Function (6): arginase activity (GO:0004053), manganese ion binding (GO:0030145), protein binding (GO:0005515), hydrolase activity (GO:0016787), hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines (GO:0016813), metal ion binding (GO:0046872)
GO Cellular Component (7): extracellular region (GO:0005576), obsolete extracellular space (GO:0005615), nucleus (GO:0005634), cytoplasm (GO:0005737), cytosol (GO:0005829), azurophil granule lumen (GO:0035578), specific granule lumen (GO:0035580)
Reactome top-level categories
Rollup of top-5 pathways:
| Category | Pathways |
|---|---|
| Innate Immune System | 1 |
| Metabolism of amino acids and derivatives | 1 |
| Diseases of the urea cycle | 1 |
| Immune System | 1 |
| Metabolism | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 3 |
| immune response | 2 |
| secretory granule lumen | 2 |
| biosynthetic process | 1 |
| urea metabolic process | 1 |
| arginine metabolic process | 1 |
| L-amino acid catabolic process | 1 |
| proteinogenic amino acid catabolic process | 1 |
| response to other organism | 1 |
| T cell proliferation | 1 |
| regulation of T cell proliferation | 1 |
| negative regulation of lymphocyte proliferation | 1 |
| negative regulation of T cell activation | 1 |
| response to protozoan | 1 |
| defense response to other organism | 1 |
| defense response to symbiont | 1 |
| negative regulation of T cell proliferation | 1 |
| regulation of activated T cell proliferation | 1 |
| activated T cell proliferation | 1 |
| negative regulation of cytokine-mediated signaling pathway | 1 |
| negative regulation of response to type II interferon | 1 |
| type II interferon-mediated signaling pathway | 1 |
| regulation of type II interferon-mediated signaling pathway | 1 |
| neutrophil-mediated killing of fungus | 1 |
| regulation of neutrophil mediated killing of fungus | 1 |
| positive regulation of neutrophil mediated killing of symbiont cell | 1 |
| negative regulation of T cell cytokine production | 1 |
| negative regulation of type 2 immune response | 1 |
| T-helper 2 cell cytokine production | 1 |
| regulation of T-helper 2 cell cytokine production | 1 |
| biological_process | 1 |
| amino acid metabolic process | 1 |
| carboxylic acid metabolic process | 1 |
| cell population proliferation | 1 |
| regulation of cellular process | 1 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines | 1 |
| transition metal ion binding | 1 |
| binding | 1 |
| catalytic activity | 1 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1 |
Protein interactions and networks
STRING
4196 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ARG1 | IL10 | P22301 | 888 |
| ARG1 | IL4 | P05112 | 881 |
| ARG1 | MRC1 | P22897 | 877 |
| ARG1 | OAT | P04181 | 852 |
| ARG1 | RETNLB | Q9BQ08 | 836 |
| ARG1 | SLC7A2 | P52569 | 833 |
| ARG1 | NOS2 | P35228 | 810 |
| ARG1 | ASS1 | P00966 | 807 |
| ARG1 | IFNG | P01579 | 802 |
| ARG1 | IL13 | P35225 | 798 |
| ARG1 | IL6 | P05231 | 793 |
| ARG1 | IL1B | P01584 | 791 |
| ARG1 | ASL | P04424 | 788 |
| ARG1 | ITGAM | P11215 | 786 |
| ARG1 | TNF | P01375 | 778 |
IntAct
84 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| ESR1 | ESR1 | psi-mi:“MI:0914”(association) | 0.870 |
| MAX | E2F6 | psi-mi:“MI:0914”(association) | 0.710 |
| ESR1 | TRIM24 | psi-mi:“MI:0914”(association) | 0.640 |
| POLR2L | RCCD1 | psi-mi:“MI:0914”(association) | 0.640 |
| ALDH3A1 | RCCD1 | psi-mi:“MI:0914”(association) | 0.640 |
| ARG1 | psi-mi:“MI:0407”(direct interaction) | 0.560 | |
| CCDC51 | TGM5 | psi-mi:“MI:0914”(association) | 0.530 |
| ZIC1 | CTSV | psi-mi:“MI:0914”(association) | 0.530 |
| CBX1 | ZNF292 | psi-mi:“MI:0914”(association) | 0.530 |
| FLOT1 | ARG1 | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| ARG1 | ARG2 | psi-mi:“MI:0915”(physical association) | 0.400 |
| ARG1 | PPP3CC | psi-mi:“MI:0915”(physical association) | 0.400 |
| ARG1 | ALDH4A1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| METTL14 | HMGB1P1 | psi-mi:“MI:0914”(association) | 0.350 |
| TRAF2 | TMEM178B | psi-mi:“MI:0914”(association) | 0.350 |
| ATXN1 | psi-mi:“MI:0914”(association) | 0.350 | |
| COPS5 | FBLL1 | psi-mi:“MI:0914”(association) | 0.350 |
| LRRK2 | psi-mi:“MI:0914”(association) | 0.350 | |
| AP3B1 | psi-mi:“MI:0914”(association) | 0.350 | |
| USP53 | ANXA2P2 | psi-mi:“MI:0914”(association) | 0.350 |
| GSK3A | PRSS37 | psi-mi:“MI:0914”(association) | 0.350 |
| GSK3B | PRSS37 | psi-mi:“MI:0914”(association) | 0.350 |
| KDM4A | PIPSL | psi-mi:“MI:0914”(association) | 0.350 |
| SETD7 | MYL12B | psi-mi:“MI:0914”(association) | 0.350 |
| WRAP73 | GGCT | psi-mi:“MI:0914”(association) | 0.350 |
| P | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (152): ARG1 (Affinity Capture-MS), ARG1 (Affinity Capture-MS), ARG1 (Affinity Capture-MS), ARG1 (Affinity Capture-MS), ARG1 (Affinity Capture-MS), ARG1 (Affinity Capture-MS), ARG1 (Affinity Capture-MS), ARG1 (Affinity Capture-MS), ARG1 (Affinity Capture-MS), ARG1 (Affinity Capture-MS), ARG1 (Affinity Capture-MS), ARG1 (Affinity Capture-MS), ARG1 (Affinity Capture-MS), ARG1 (Affinity Capture-MS), ARG1 (Affinity Capture-MS)
ESM2 similar proteins: A0A2I4HXH5, A5D6U8, B3A0N5, B6EWW8, E0D877, F8S0Z7, O00462, O35409, P05089, P15693, P19492, P21588, P21589, P29240, P31422, P42263, P49614, P49900, P50635, P52307, P70627, P83456, P83852, Q05927, Q14832, Q1ZZH1, Q29444, Q2KJ64, Q4FZV0, Q561R9, Q5R979, Q5RAL3, Q5RFI5, Q5TVM9, Q5XGR8, Q61503, Q641Z7, Q6AYS4, Q6PCE3, Q8CAA7
Diamond homologs: A0A2R2JFW7, A0A509AF89, C4LSS0, O08691, O08701, P00812, P05089, P07824, P0A2X9, P0A2Y0, P0A2Y1, P14012, P30759, P33280, P37818, P39138, P40906, P49900, P53608, P60086, P60087, P60088, P78540, Q10066, Q12611, Q1E180, Q2KJ64, Q4VK78, Q58DL1, Q61176, Q6CIB4, Q6CLS8, Q6G7E9, Q6GER3, Q74ZW4, Q7M0Z3, Q8I384, Q8NVE3, Q91553, Q91554
SIGNOR signaling
4 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| AR | “up-regulates quantity by expression” | ARG1 | “transcriptional regulation” |
| ARG1 | “up-regulates quantity” | L-ornithine | “chemical modification” |
| L-arginine | up-regulates | ARG1 | |
| STAT6 | up-regulates | ARG1 |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 111 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| positive regulation of miRNA transcription | 5 | 14.5× | 8e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
531 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 63 |
| Likely pathogenic | 47 |
| Uncertain significance | 144 |
| Likely benign | 225 |
| Benign | 16 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1064873 | NM_000045.4(ARG1):c.839del (p.Pro280fs) | Pathogenic |
| 1072006 | NM_000045.4(ARG1):c.272del (p.Gly91fs) | Pathogenic |
| 1074774 | NM_000045.4(ARG1):c.50del (p.Lys17fs) | Pathogenic |
| 1332810 | NM_000045.4(ARG1):c.547_549del (p.Asp183del) | Pathogenic |
| 1343393 | NM_000045.4(ARG1):c.305+1G>A | Pathogenic |
| 1385981 | NM_000045.4(ARG1):c.124G>T (p.Glu42Ter) | Pathogenic |
| 1386013 | NM_000045.4(ARG1):c.603_604del (p.Glu202fs) | Pathogenic |
| 1427598 | NM_000045.4(ARG1):c.130+1G>A | Pathogenic |
| 1451696 | NM_000045.4(ARG1):c.577_578del (p.Leu193fs) | Pathogenic |
| 1453308 | NM_000045.4(ARG1):c.766G>T (p.Glu256Ter) | Pathogenic |
| 1453446 | NM_000045.4(ARG1):c.807_811del (p.Leu270fs) | Pathogenic |
| 1458205 | NM_000045.4(ARG1):c.820_823dup (p.Ile275fs) | Pathogenic |
| 1501863 | NM_000045.4(ARG1):c.560+2T>C | Pathogenic |
| 1973646 | NM_000045.4(ARG1):c.371A>G (p.Asp124Gly) | Pathogenic |
| 1999814 | NM_000045.4(ARG1):c.157del (p.Leu53fs) | Pathogenic |
| 2018545 | NM_000045.4(ARG1):c.124_125insT (p.Glu42fs) | Pathogenic |
| 203606 | NM_000045.4(ARG1):c.272dup (p.Arg92fs) | Pathogenic |
| 2041678 | NC_000006.12:g.131583354GAAA[1] | Pathogenic |
| 2058364 | NM_000045.4(ARG1):c.802+1G>A | Pathogenic |
| 2064930 | NM_000045.4(ARG1):c.594_595dup (p.Ser199fs) | Pathogenic |
| 2102477 | NM_000045.4(ARG1):c.57+1G>T | Pathogenic |
| 2124468 | NM_000045.4(ARG1):c.640del (p.Glu214fs) | Pathogenic |
| 2129477 | NM_000045.4(ARG1):c.159_163del (p.Pro54fs) | Pathogenic |
| 2133556 | NM_000045.4(ARG1):c.666-2A>C | Pathogenic |
| 2136470 | NM_000045.4(ARG1):c.401C>T (p.Thr134Ile) | Pathogenic |
| 2136471 | NM_000045.4(ARG1):c.673del (p.Arg225fs) | Pathogenic |
| 2386 | NM_000045.4(ARG1):c.263_266del (p.Lys88fs) | Pathogenic |
| 2387 | NM_000045.4(ARG1):c.78del (p.Gly27fs) | Pathogenic |
| 2388 | NM_000045.4(ARG1):c.871C>T (p.Arg291Ter) | Pathogenic |
| 2389 | NM_000045.4(ARG1):c.869C>G (p.Thr290Ser) | Pathogenic |
SpliceAI
0 predictions. Top by Δscore:
AlphaMissense
2075 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 6:131581296:A:T | D128V | 0.999 |
| 6:131581277:T:A | W122R | 0.998 |
| 6:131581277:T:C | W122R | 0.998 |
| 6:131583377:A:C | S230R | 0.998 |
| 6:131583379:T:A | S230R | 0.998 |
| 6:131583379:T:G | S230R | 0.998 |
| 6:131583390:A:T | D234V | 0.998 |
| 6:131583391:C:A | D234E | 0.998 |
| 6:131583391:C:G | D234E | 0.998 |
| 6:131581284:A:T | D124V | 0.997 |
| 6:131581285:T:A | D124E | 0.997 |
| 6:131581285:T:G | D124E | 0.997 |
| 6:131581295:G:C | D128H | 0.997 |
| 6:131581296:A:C | D128A | 0.997 |
| 6:131581297:T:A | D128E | 0.997 |
| 6:131581297:T:G | D128E | 0.997 |
| 6:131582695:A:C | R180S | 0.997 |
| 6:131582695:A:T | R180S | 0.997 |
| 6:131583384:A:T | D232V | 0.997 |
| 6:131583385:T:A | D232E | 0.997 |
| 6:131583385:T:G | D232E | 0.997 |
| 6:131583769:A:T | E277V | 0.997 |
| 6:131579278:G:C | D100H | 0.996 |
| 6:131579279:A:T | D100V | 0.996 |
| 6:131579283:C:A | H101Q | 0.996 |
| 6:131579283:C:G | H101Q | 0.996 |
| 6:131581232:A:C | S107R | 0.996 |
| 6:131581234:C:A | S107R | 0.996 |
| 6:131581234:C:G | S107R | 0.996 |
| 6:131581291:C:A | H126Q | 0.996 |
dbSNP variants (sampled 300 via entrez): RS1000157171 (6:131574975 A>G), RS1000451954 (6:131584017 G>T), RS1000793642 (6:131582460 G>A,T), RS1001645468 (6:131575825 G>A), RS1001681431 (6:131574290 T>G), RS1001842006 (6:131574566 G>A), RS1001906565 (6:131576163 G>A,C), RS1002373049 (6:131581087 C>T), RS1002381054 (6:131574108 G>A), RS1002736485 (6:131580005 A>G), RS1003113919 (6:131583931 T>C), RS1003121552 (6:131579108 TAG>T), RS1003765832 (6:131572710 C>G), RS1003922823 (6:131572705 A>C), RS1003946085 (6:131574970 A>G)
Disease associations
OMIM: gene MIM:608313 | disease phenotypes: MIM:207800, MIM:614249
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| arginase deficiency | Definitive | Autosomal recessive |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| arginase deficiency | Definitive | AR |
Mondo (2): arginase deficiency (MONDO:0008814), intellectual disability, autosomal recessive 18 (MONDO:0013651)
Orphanet (2): Argininemia (Orphanet:90), Autosomal recessive non-syndromic intellectual disability (Orphanet:88616)
HPO phenotypes
31 total (30 of 31 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000708 | Atypical behavior |
| HP:0000737 | Irritability |
| HP:0000752 | Hyperactivity |
| HP:0001249 | Intellectual disability |
| HP:0001250 | Seizure |
| HP:0001263 | Global developmental delay |
| HP:0001272 | Cerebellar atrophy |
| HP:0001396 | Cholestasis |
| HP:0001413 | Micronodular cirrhosis |
| HP:0001987 | Hyperammonemia |
| HP:0002013 | Vomiting |
| HP:0002039 | Anorexia |
| HP:0002064 | Spastic gait |
| HP:0002167 | Abnormal speech pattern |
| HP:0002240 | Hepatomegaly |
| HP:0002313 | Spastic paraparesis |
| HP:0002353 | EEG abnormality |
| HP:0002359 | Frequent falls |
| HP:0002478 | Progressive spastic quadriplegia |
| HP:0002572 | Episodic vomiting |
| HP:0003218 | Oroticaciduria |
| HP:0003623 | Neonatal onset |
| HP:0004374 | Hemiplegia/hemiparesis |
| HP:0006580 | Portal fibrosis |
| HP:0008339 | Diaminoaciduria |
| HP:0008897 | Postnatal growth retardation |
| HP:0010864 | Severe intellectual disability |
| HP:0011463 | Childhood onset |
| HP:0500153 | Hyperargininemia |
GWAS associations
20 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001057_7 | Obesity | 3.000000e-07 |
| GCST002424_3 | C-reactive protein levels | 3.000000e-08 |
| GCST005577_5 | Change in glucose in response to thiazide diuretic treatment in hypertension | 6.000000e-07 |
| GCST005984_48 | Glomerular filtration rate | 3.000000e-12 |
| GCST005985_26 | Creatinine levels | 3.000000e-11 |
| GCST006585_2989 | Blood protein levels | 1.000000e-07 |
| GCST006867_54 | Type 2 diabetes | 2.000000e-08 |
| GCST007344_79 | Estimated glomerular filtration rate | 4.000000e-10 |
| GCST007876_51 | Estimated glomerular filtration rate | 2.000000e-11 |
| GCST008058_58 | Estimated glomerular filtration rate | 2.000000e-27 |
| GCST008059_2 | Estimated glomerular filtration rate | 5.000000e-17 |
| GCST008060_7 | Estimated glomerular filtration rate | 1.000000e-08 |
| GCST008064_22 | Chronic kidney disease | 2.000000e-06 |
| GCST008746_18 | Estimated glomerular filtration rate in diabetes | 3.000000e-08 |
| GCST008747_53 | Estimated glomerular filtration rate | 2.000000e-15 |
| GCST010241_409 | Apolipoprotein A1 levels | 2.000000e-10 |
| GCST010242_459 | HDL cholesterol levels | 8.000000e-11 |
| GCST012020_125 | Serum metabolite levels | 8.000000e-27 |
| GCST012020_520 | Serum metabolite levels | 1.000000e-16 |
| GCST012021_61 | Serum metabolite levels | 1.000000e-16 |
EFO canonical traits (4, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004458 | C-reactive protein measurement |
| EFO:0004468 | glucose measurement |
| EFO:0004614 | apolipoprotein A 1 measurement |
| EFO:0004612 | high density lipoprotein cholesterol measurement |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D020162 | Hyperargininemia | C10.228.140.163.100.937.500; C16.320.565.100.940.500; C16.320.565.189.937.500; C18.452.132.100.937.437; C18.452.648.100.940.437; C18.452.648.189.937.437 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1075097 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
2 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 965 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL4218271 | NUMIDARGISTAT | 2 | 927 |
| CHEMBL1234777 | NOR-NOHA | 1 | 38 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB clinical annotations
1 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs2781659 | Efficacy | 3 | selective beta-2-adrenoreceptor agonists | Asthma |
PharmGKB variants
2 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs2781659 | ARG1, MED23 | 3 | 3.00 | 1 | selective beta-2-adrenoreceptor agonists |
| rs2781666 | ARG1 | 0.00 | 0 |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — Arginase
Most potent curated ligand interactions (3 total), top 3:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| 2(S)-amino-6-boronohexanoic acid | Inhibition | 8.3 | pKd |
| compound 9 [PMID: 23472952] | Inhibition | 6.65 | pIC50 |
| A1P | Inhibition | 5.7 | pKd |
Binding affinities (BindingDB)
40 measured of 79 human assays (79 total across all organisms); most potent 40 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| CHEMBL4873520 | IC50 | 2.2 nM | |
| CHEMBL4871097 | IC50 | 3.9 nM | |
| (3aS,4R,6aR)-1-[(2S)-2-aminopropanoyl]-4-(4-boronobutyl)-2,3,3a,5,6,6a-hexahydropyrrolo[2,3-c]pyrrole-4-carboxylic acid | IC50 | 550 nM | US-20250320233: ARGINASE INHIBITOR AND PHARMACEUTICAL COMPOSITION COMPRISING THE SAME |
| (3aS,4R,6aR)-1-[(2S)-2-amino-3-phenylpropanoyl]-4-(4-boronobutyl)-2,3,3a,5,6,6a-hexahydropyrrolo[2,3-c]pyrrole-4-carboxylic acid | IC50 | 550 nM | US-20250320233: ARGINASE INHIBITOR AND PHARMACEUTICAL COMPOSITION COMPRISING THE SAME |
| (3aS,4R,6aR)-4-(4-boronobutyl)-1-[(2S)-pyrrolidine-2-carbonyl]-2,3,3a,5,6,6a-hexahydropyrrolo[2,3-c]pyrrole-4-carboxylic acid | IC50 | 550 nM | US-20250320233: ARGINASE INHIBITOR AND PHARMACEUTICAL COMPOSITION COMPRISING THE SAME |
| (3aS,4R,6aR)-1-[(2R,3S)-2-amino-3-hydroxybutanoyl]-4-(4-boronobutyl)-2,3,3a,5,6,6a-hexahydropyrrolo[2,3-c]pyrrole-4-carboxylic acid | IC50 | 550 nM | US-20250320233: ARGINASE INHIBITOR AND PHARMACEUTICAL COMPOSITION COMPRISING THE SAME |
| (3aS,4R,6aR)-4-(4-boronobutyl)-1-[2-(methylamino)ethyl]-2,3,3a,5,6,6a-hexahydropyrrolo[2,3-c]pyrrole-4-carboxylic acid | IC50 | 550 nM | US-20250320233: ARGINASE INHIBITOR AND PHARMACEUTICAL COMPOSITION COMPRISING THE SAME |
| (1S,2S)-1-amino-2-(3-boronopropyl)cyclopentanecarboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-4-amino-3-(3-boronopropyl)piperidine-4-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3S,4S)-4-amino-3-(3-boronopropyl)piperidine-4-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)pyrrolidine-3-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-isobutylpyrrolidine-3- carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-1-benzyl-4-(3-boronopropyl)pyrrolidine-3- carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-(pyridin-3- ylmethyl)pyrrolidine-3-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-(piperidin)-4- ylmethyl)pyrrolidine-3-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-(quinolin-4- ylmethyl)pyrrolidine-3-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-(3-(4- chlorophenyl)propyl)pyrrolidine-3-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-(7H-purin-6-yl)pyrrolidine- 3-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| 5-((3R,4S)-3-amino-4-(3-boronopropyl)-3-carboxypyrrolidin-1- yl)nicotinic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-(piperidin-4-yl)pyrrolidine- 3-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-(4- carboxycyclohexyl)pyrrolidine-3-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-4-(3-boronopropyl)-3-(methylamino)pyrrolidine-3- carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-(4- chlorophenylcarbamoyl)pyrrolidine-3-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-(2-(4- chlorophenyl)acetyl)pyrrolidine-3-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-(4- fluorobenzoyl)pyrrolidine-3-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-(4- methoxybenzoyl)pyrrolidine-3-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-(4- fluorophenylcarbamoyl)pyrrolidine-3-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-1-(2-aminophenylsulfonyl)-4-(3- boronopropyl)pyrrolidine-3-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-1-(2-amino-3-(4- (trifluoromethyl)phenyl)propanoyl)-4-(3-boronopropyl)pyrrolidine- 3-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-1-(2-(benzylamino)acetyl)-4-(3- boronopropyl)pyrrolidine-3-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (1S,2S,4S)-1,4-diamino-2-(3-boronopropyl)cyclopentanecarboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (1S,2S,4S)-1-amino-4-(aminomethyl)-2-(3-boronopropyl)cyclopentane-1-carboxylic acid | IC50 | 625 nM | US-10098902: Arginase inhibitors as therapeutics |
| (2R,3S)-3-amino-2-(3-boronopropyl)tetrahydrofuran-3-carboxylic acid | IC50 | 1500 nM | US-10098902: Arginase inhibitors as therapeutics |
| 3-amino-2-(3-boronopropyl)tetrahydrothiophene-3-carboxylic acid | IC50 | 1500 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4R)-3-amino-4-(3-boronopropyl)pyrrolidine-3-carboxylic acid | IC50 | 1500 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-(pyridin-2- ylmethyl)pyrrolidine-3-carboxylic acid | IC50 | 1500 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-(4-methylpyridin-3- yl)pyrrolidine-3-carboxylic acid | IC50 | 1500 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-(2-(methylamino)-3- phenylpropanoyl)pyrrolidine-3-carboxylic acid | IC50 | 1500 nM | US-10098902: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-(7H-purin-6-yl)pyrrolidine- 3-carboxylic acid | IC50 | 2000 nM | US-10603330: Arginase inhibitors as therapeutics |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-(3-(dimethylamino)-2,2- dimethylpropyl)pyrrolidine-3-carboxylic acid | IC50 | 3500 nM | US-10098902: Arginase inhibitors as therapeutics |
ChEMBL bioactivities
525 potent at pChembl≥5 of 591 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
PubChem BioAssay actives
298 with measured affinity, of 407 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (3R,4S)-3-amino-1-(2-aminoethylsulfamoyl)-4-(3-boronopropyl)pyrrolidine-3-carboxylic acid | 1724061: Inhibition of human Arg1 | ic50 | 0.0001 | uM |
| (2S,3R,4R)-4-[[(2S)-2-amino-3,3-dimethylbutanoyl]amino]-3-(3-boronopropyl)pyrrolidine-2-carboxylic acid | 1724058: Inhibition of human Arg1 by TOGA assay | ic50 | 0.0008 | uM |
| (2S,3R,4R)-4-[[(2S)-2-amino-2-cyclopentylacetyl]amino]-3-(3-boronopropyl)pyrrolidine-2-carboxylic acid | 1724058: Inhibition of human Arg1 by TOGA assay | ic50 | 0.0008 | uM |
| (1R,2S,5R)-1-amino-5-(2-boronoethyl)-2-(piperidin-1-ylmethyl)cyclohexane-1-carboxylic acid | 1724061: Inhibition of human Arg1 | ic50 | 0.0010 | uM |
| (2S,3R,5S)-3-amino-1-[(2S)-2-aminopropanoyl]-5-(2-boronoethyl)-2-methylpiperidine-3-carboxylic acid | 1724061: Inhibition of human Arg1 | ic50 | 0.0010 | uM |
| (2S,3R,5S)-3-amino-1-[(2S)-2-amino-3-(1H-imidazol-5-yl)propanoyl]-5-(2-boronoethyl)-2-methylpiperidine-3-carboxylic acid | 1724061: Inhibition of human Arg1 | ic50 | 0.0010 | uM |
| (2S,3R,5S)-3-amino-1-(2-aminoacetyl)-5-(2-boronoethyl)-2-methylpiperidine-3-carboxylic acid | 1724061: Inhibition of human Arg1 | ic50 | 0.0010 | uM |
| (1R,2S,5R)-1-amino-2-[[[(2R)-2-aminopropanoyl]amino]methyl]-5-(2-boronoethyl)cyclohexane-1-carboxylic acid | 1875446: Inhibition of recombinant human ARG1 expressed in Escherichia coli using L-arginine hydrochloride as substrate incubated for 1 hr by colorimetric assay | ic50 | 0.0010 | uM |
| (1R,2S,5R)-1-amino-2-[[[(2S)-2-amino-4-methylpentanoyl]amino]methyl]-5-(2-boronoethyl)cyclohexane-1-carboxylic acid | 1875446: Inhibition of recombinant human ARG1 expressed in Escherichia coli using L-arginine hydrochloride as substrate incubated for 1 hr by colorimetric assay | ic50 | 0.0010 | uM |
| (1R,2S,5R)-1-amino-2-[[[(2R)-2-amino-3-methylbutanoyl]amino]methyl]-5-(2-boronoethyl)cyclohexane-1-carboxylic acid | 1875446: Inhibition of recombinant human ARG1 expressed in Escherichia coli using L-arginine hydrochloride as substrate incubated for 1 hr by colorimetric assay | ic50 | 0.0010 | uM |
| (1R,2S,5R)-1-amino-2-[[(2-aminoacetyl)amino]methyl]-5-(2-boronoethyl)cyclohexane-1-carboxylic acid | 1875446: Inhibition of recombinant human ARG1 expressed in Escherichia coli using L-arginine hydrochloride as substrate incubated for 1 hr by colorimetric assay | ic50 | 0.0010 | uM |
| (1R,2S,5R)-1-amino-2-[[[(2S)-2-amino-4-methylsulfanylbutanoyl]amino]methyl]-5-(2-boronoethyl)cyclohexane-1-carboxylic acid | 1875446: Inhibition of recombinant human ARG1 expressed in Escherichia coli using L-arginine hydrochloride as substrate incubated for 1 hr by colorimetric assay | ic50 | 0.0010 | uM |
| (3R,4S)-3-amino-1-[(2S)-2-amino-3-phenylpropyl]-4-(3-boronopropyl)pyrrolidine-3-carboxylic acid | 1540248: Inhibition of human recombinant arginase 1 expressed in Escherichia coli BL21 (DE3) assessed as reduction in urea production using L-arginine as substrate in presence of MnSO4 incubated for 60 mins by o-phthaldialdehyde/N-(1-naphthyl)ethylene-diamine dihydrochloride reagent based colorimetric assay | ic50 | 0.0013 | uM |
| (2S,3R,4R)-4-[[(2S)-2-amino-4-methylpentanoyl]amino]-3-(3-boronopropyl)pyrrolidine-2-carboxylic acid | 1724058: Inhibition of human Arg1 by TOGA assay | ic50 | 0.0016 | uM |
| (3aS,4S,6aR)-3a-(3-boronopropyl)-2,3,4,5,6,6a-hexahydro-1H-pyrrolo[2,3-c]pyrrole-4-carboxylic acid | 1785783: Inhibition of ARG1 (unknown origin) assessed as reduction in thio-ornithine production using thioarginine as substrate by fluorimetric analysis | ic50 | 0.0016 | uM |
| (2S,3R,4R)-4-[[(2S)-2-amino-3-methylbutanoyl]amino]-3-(3-boronopropyl)pyrrolidine-2-carboxylic acid | 1780111: Inhibition of human recombinant ARG1 expressed in Escherichia coli using thioarginine as a substrate preincubated for 30 mins followed by substrate addition and incubated for 60 mins by fluorescence based arginine thio ornithine generating assay | ic50 | 0.0020 | uM |
| (1S,5R,8S)-8-(3-boronopropyl)-2,6-diazabicyclo[3.2.1]octane-5-carboxylic acid | 1785783: Inhibition of ARG1 (unknown origin) assessed as reduction in thio-ornithine production using thioarginine as substrate by fluorimetric analysis | ic50 | 0.0022 | uM |
| (3R,4S)-3-amino-1-[(2S)-2-amino-2-phenylethyl]-4-(3-boronopropyl)pyrrolidine-3-carboxylic acid | 1540248: Inhibition of human recombinant arginase 1 expressed in Escherichia coli BL21 (DE3) assessed as reduction in urea production using L-arginine as substrate in presence of MnSO4 incubated for 60 mins by o-phthaldialdehyde/N-(1-naphthyl)ethylene-diamine dihydrochloride reagent based colorimetric assay | ic50 | 0.0025 | uM |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-[[(2R)-piperidin-2-yl]methyl]pyrrolidine-3-carboxylic acid | 1540248: Inhibition of human recombinant arginase 1 expressed in Escherichia coli BL21 (DE3) assessed as reduction in urea production using L-arginine as substrate in presence of MnSO4 incubated for 60 mins by o-phthaldialdehyde/N-(1-naphthyl)ethylene-diamine dihydrochloride reagent based colorimetric assay | ic50 | 0.0026 | uM |
| (2R,4R)-2-(4-boronobutyl)-4-(methylamino)pyrrolidine-2-carboxylic acid | 1724058: Inhibition of human Arg1 by TOGA assay | ic50 | 0.0030 | uM |
| (2S,3R,4R)-4-amino-3-(3-boronopropyl)pyrrolidine-2-carboxylic acid | 1780111: Inhibition of human recombinant ARG1 expressed in Escherichia coli using thioarginine as a substrate preincubated for 30 mins followed by substrate addition and incubated for 60 mins by fluorescence based arginine thio ornithine generating assay | ic50 | 0.0030 | uM |
| 3-[(4aS,5S,7aR)-5-methoxycarbonyl-1,2,3,4,5,6,7,7a-octahydropyrrolo[3,4-b]pyridin-4a-yl]propylboronic acid | 1785783: Inhibition of ARG1 (unknown origin) assessed as reduction in thio-ornithine production using thioarginine as substrate by fluorimetric analysis | ic50 | 0.0032 | uM |
| (1R,5R,6R)-6-(3-boronopropyl)-2-azabicyclo[3.1.1]heptane-5-carboxylic acid | 1785783: Inhibition of ARG1 (unknown origin) assessed as reduction in thio-ornithine production using thioarginine as substrate by fluorimetric analysis | ic50 | 0.0039 | uM |
| (2S,3S,4R)-3-(3-boronopropyl)-4-hydroxypyrrolidine-2-carboxylic acid | 1780111: Inhibition of human recombinant ARG1 expressed in Escherichia coli using thioarginine as a substrate preincubated for 30 mins followed by substrate addition and incubated for 60 mins by fluorescence based arginine thio ornithine generating assay | ic50 | 0.0040 | uM |
| (1S,2S,3aR,5S,6aR)-2,5-diamino-1-(3-boronopropyl)-3,3a,4,5,6,6a-hexahydro-1H-pentalene-2-carboxylic acid | 1649069: Inhibition of human arginase1 in presence of DNTB by thio ornithine generation assay | ic50 | 0.0040 | uM |
| (1S,2S,3aR,5S,6R,6aR)-2-amino-1-(3-boronopropyl)-6-fluoro-5-(methylamino)-3,3a,4,5,6,6a-hexahydro-1H-pentalene-2-carboxylic acid | 1649069: Inhibition of human arginase1 in presence of DNTB by thio ornithine generation assay | ic50 | 0.0050 | uM |
| (2S,3R)-3-(aminomethyl)-3-(3-boronopropyl)pyrrolidine-2-carboxylic acid | 1780111: Inhibition of human recombinant ARG1 expressed in Escherichia coli using thioarginine as a substrate preincubated for 30 mins followed by substrate addition and incubated for 60 mins by fluorescence based arginine thio ornithine generating assay | ic50 | 0.0050 | uM |
| (2S,3R,4R)-3-(3-boronopropyl)-4-[[(2S)-3-methyl-2-(methylamino)butanoyl]amino]pyrrolidine-2-carboxylic acid | 1780111: Inhibition of human recombinant ARG1 expressed in Escherichia coli using thioarginine as a substrate preincubated for 30 mins followed by substrate addition and incubated for 60 mins by fluorescence based arginine thio ornithine generating assay | ic50 | 0.0050 | uM |
| (3aS,4S,6aR)-3a-(3-boronopropyl)-1,3,4,5,6,6a-hexahydrofuro[3,4-c]pyrrole-4-carboxylic acid | 1785783: Inhibition of ARG1 (unknown origin) assessed as reduction in thio-ornithine production using thioarginine as substrate by fluorimetric analysis | ic50 | 0.0050 | uM |
| (2S)-2-amino-6-boronohexanoic acid | 1724056: Binding affinity to human Arg1 at pH 8.5 | kd | 0.0050 | uM |
| (1S,2S,3aR,5R,6R,6aR)-2-amino-1-(3-boronopropyl)-6-fluoro-5-(methylamino)-3,3a,4,5,6,6a-hexahydro-1H-pentalene-2-carboxylic acid | 1649069: Inhibition of human arginase1 in presence of DNTB by thio ornithine generation assay | ic50 | 0.0070 | uM |
| (2S,3R,5R)-3-(3-boronopropyl)-5-methylpyrrolidine-2-carboxylic acid | 1780111: Inhibition of human recombinant ARG1 expressed in Escherichia coli using thioarginine as a substrate preincubated for 30 mins followed by substrate addition and incubated for 60 mins by fluorescence based arginine thio ornithine generating assay | ic50 | 0.0070 | uM |
| (3R,4S)-3-amino-1-[(2S)-2-aminopropyl]-4-(3-boronopropyl)pyrrolidine-3-carboxylic acid | 1540248: Inhibition of human recombinant arginase 1 expressed in Escherichia coli BL21 (DE3) assessed as reduction in urea production using L-arginine as substrate in presence of MnSO4 incubated for 60 mins by o-phthaldialdehyde/N-(1-naphthyl)ethylene-diamine dihydrochloride reagent based colorimetric assay | ic50 | 0.0077 | uM |
| (2S,3S)-3-(aminomethyl)-3-(3-boronopropyl)azetidine-2-carboxylic acid | 1724058: Inhibition of human Arg1 by TOGA assay | ic50 | 0.0080 | uM |
| (2S,3R,5S)-3-(3-boronopropyl)-5-(hydroxymethyl)pyrrolidine-2-carboxylic acid | 1780111: Inhibition of human recombinant ARG1 expressed in Escherichia coli using thioarginine as a substrate preincubated for 30 mins followed by substrate addition and incubated for 60 mins by fluorescence based arginine thio ornithine generating assay | ic50 | 0.0080 | uM |
| (2R,4R)-4-amino-2-(4-boronobutyl)pyrrolidine-2-carboxylic acid | 1724058: Inhibition of human Arg1 by TOGA assay | ic50 | 0.0100 | uM |
| (3R,4S)-3-amino-1-[(2R)-2-amino-3-phenylpropyl]-4-(3-boronopropyl)pyrrolidine-3-carboxylic acid | 1540248: Inhibition of human recombinant arginase 1 expressed in Escherichia coli BL21 (DE3) assessed as reduction in urea production using L-arginine as substrate in presence of MnSO4 incubated for 60 mins by o-phthaldialdehyde/N-(1-naphthyl)ethylene-diamine dihydrochloride reagent based colorimetric assay | ic50 | 0.0100 | uM |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-[[(3R)-morpholin-3-yl]methyl]pyrrolidine-3-carboxylic acid | 1540248: Inhibition of human recombinant arginase 1 expressed in Escherichia coli BL21 (DE3) assessed as reduction in urea production using L-arginine as substrate in presence of MnSO4 incubated for 60 mins by o-phthaldialdehyde/N-(1-naphthyl)ethylene-diamine dihydrochloride reagent based colorimetric assay | ic50 | 0.0100 | uM |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-[[(2R)-pyrrolidin-2-yl]methyl]pyrrolidine-3-carboxylic acid | 1540248: Inhibition of human recombinant arginase 1 expressed in Escherichia coli BL21 (DE3) assessed as reduction in urea production using L-arginine as substrate in presence of MnSO4 incubated for 60 mins by o-phthaldialdehyde/N-(1-naphthyl)ethylene-diamine dihydrochloride reagent based colorimetric assay | ic50 | 0.0100 | uM |
| 2-amino-6-borono-2-[3-[4-(4-chlorophenyl)-4-hydroxypiperidin-1-yl]propyl]hexanoic acid | 1724059: Inhibition of human Arg1 using L-arginine as substrate after 60 mins by spectrophotometric analysis | ki | 0.0100 | uM |
| 2-amino-6-borono-2-[3-(2-phenylethylamino)propyl]hexanoic acid | 1724059: Inhibition of human Arg1 using L-arginine as substrate after 60 mins by spectrophotometric analysis | ki | 0.0100 | uM |
| (2S,3R,4R)-4-[[(2S)-2-aminopropanoyl]amino]-3-(3-boronopropyl)pyrrolidine-2-carboxylic acid | 1780111: Inhibition of human recombinant ARG1 expressed in Escherichia coli using thioarginine as a substrate preincubated for 30 mins followed by substrate addition and incubated for 60 mins by fluorescence based arginine thio ornithine generating assay | ic50 | 0.0110 | uM |
| (3R,4S)-3-amino-4-(3-boronopropyl)-1-[[(2S)-pyrrolidin-2-yl]methyl]pyrrolidine-3-carboxylic acid | 1540248: Inhibition of human recombinant arginase 1 expressed in Escherichia coli BL21 (DE3) assessed as reduction in urea production using L-arginine as substrate in presence of MnSO4 incubated for 60 mins by o-phthaldialdehyde/N-(1-naphthyl)ethylene-diamine dihydrochloride reagent based colorimetric assay | ic50 | 0.0110 | uM |
| (5S,7S,8S)-8-amino-7-(3-boronopropyl)-1-azaspiro[4.4]nonane-8-carboxylic acid | 1649069: Inhibition of human arginase1 in presence of DNTB by thio ornithine generation assay | ic50 | 0.0120 | uM |
| (5R,7S,8S)-8-amino-7-(3-boronopropyl)-2-azaspiro[4.4]nonane-8-carboxylic acid | 1649069: Inhibition of human arginase1 in presence of DNTB by thio ornithine generation assay | ic50 | 0.0130 | uM |
| (1S,2S,3aR,4S,5S,6aS)-2-amino-1-(3-boronopropyl)-4-fluoro-5-hydroxy-3,3a,4,5,6,6a-hexahydro-1H-pentalene-2-carboxylic acid | 1649069: Inhibition of human arginase1 in presence of DNTB by thio ornithine generation assay | ic50 | 0.0140 | uM |
| (1S,2S,3aR,4S,5S,6aS)-2-amino-1-(3-boronopropyl)-4-fluoro-5-(methylamino)-3,3a,4,5,6,6a-hexahydro-1H-pentalene-2-carboxylic acid | 1649069: Inhibition of human arginase1 in presence of DNTB by thio ornithine generation assay | ic50 | 0.0140 | uM |
| trans-(1S,2S)-1-amino-2-(3-boronopropyl)cyclopentane-1-carboxylic acid | 1649069: Inhibition of human arginase1 in presence of DNTB by thio ornithine generation assay | ic50 | 0.0140 | uM |
| (2S,3R)-3-(3-boronopropyl)pyrrolidine-2-carboxylic acid | 1780111: Inhibition of human recombinant ARG1 expressed in Escherichia coli using thioarginine as a substrate preincubated for 30 mins followed by substrate addition and incubated for 60 mins by fluorescence based arginine thio ornithine generating assay | ic50 | 0.0160 | uM |
| (3R,4S)-3-amino-1-[(2R)-2-aminopropyl]-4-(3-boronopropyl)pyrrolidine-3-carboxylic acid | 1540248: Inhibition of human recombinant arginase 1 expressed in Escherichia coli BL21 (DE3) assessed as reduction in urea production using L-arginine as substrate in presence of MnSO4 incubated for 60 mins by o-phthaldialdehyde/N-(1-naphthyl)ethylene-diamine dihydrochloride reagent based colorimetric assay | ic50 | 0.0160 | uM |
CTD chemical–gene interactions
103 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Cyclosporine | decreases expression | 6 |
| perfluorooctane sulfonic acid | decreases expression, increases expression | 5 |
| Benzo(a)pyrene | increases expression, decreases reaction, decreases expression | 5 |
| Aflatoxin B1 | decreases expression, decreases methylation, affects expression | 5 |
| Acetaminophen | affects cotreatment, decreases expression | 3 |
| Estradiol | affects cotreatment, increases expression, decreases expression | 3 |
| Tetrachlorodibenzodioxin | affects cotreatment, decreases expression | 3 |
| perfluorooctanoic acid | decreases expression, increases expression | 2 |
| 2-amino-6-boronohexanoic acid | affects binding, decreases activity | 2 |
| Valproic Acid | decreases expression | 2 |
| Palmitic Acid | affects cotreatment, affects expression, decreases expression | 2 |
| cyclopamine | increases expression | 1 |
| fluxapyroxad | decreases expression | 1 |
| GSK-J4 | increases expression | 1 |
| ethoprop | decreases expression | 1 |
| lasiocarpine | decreases expression | 1 |
| methyleugenol | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| carbendazim | decreases expression | 1 |
| bisphenol A | affects expression | 1 |
| sodium arsenate | decreases expression, increases abundance | 1 |
| VX-agent | increases expression | 1 |
| tris(2-butoxyethyl) phosphate | affects expression | 1 |
| enilconazole | decreases expression | 1 |
| sodium arsenite | decreases expression | 1 |
| potassium bromate | decreases expression | 1 |
| ochratoxin A | decreases expression | 1 |
| hydroquinone | increases expression | 1 |
| boric acid | decreases activity | 1 |
| 2-amino-3,8-dimethylimidazo(4,5-f)quinoxaline | decreases expression | 1 |
ChEMBL screening assays
90 unique, capped per target: 86 binding, 4 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1104707 | Binding | Competitive inhibition of human recombinant arginase 1 by Lineweaver-Burke plot analysis | 2-aminoimidazole amino acids as inhibitors of the binuclear manganese metalloenzyme human arginase I. — J Med Chem |
| CHEMBL5723269 | Functional | Affinity Biochemical interaction: (Spectrophotometric assay, cleavage of L-arginine detected spectrophotometrically or by detecting [13C]ornithine from [13C]arginine by mass spectrometry) EUB0002667aCl ARG1 | Affinity Biochemical Literature for EUbOPEN Chemogenomic Library |
Cellosaurus cell lines
6 cell lines: 4 cancer cell line, 2 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B7V6 | Abcam Hep-G2 ARG1 KO | Cancer cell line | Male |
| CVCL_F1P7 | HyCyte HCT 15 KO-hARG1 | Cancer cell line | Male |
| CVCL_V033 | GM23407 | Transformed cell line | Female |
| CVCL_V034 | GM23409 | Transformed cell line | Female |
| CVCL_YN88 | Hep-G2/C3A-hARG1 | Cancer cell line | Male |
| CVCL_YN89 | Hep-G2/C3A-hARG1/hOTC | Cancer cell line | Male |
Clinical trials (associated diseases)
11 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT03921541 | PHASE3 | COMPLETED | Efficacy and Safety of Pegzilarginase in Patients With Arginase 1 Deficiency |
| NCT05676853 | PHASE3 | TERMINATED | A Study of Safety of Weekly Subcutaneous Pegzilarginase in Subjects With Arginase 1 Deficiency |
| NCT03378531 | PHASE2 | COMPLETED | A Study of AEB1102 (Pegzilarginase) in Patients With Arginase I Deficiency |
| NCT02488044 | PHASE1/PHASE2 | COMPLETED | A Phase 1/2 Study of AEB1102 in Patients With Arginase I Deficiency |
| NCT01421888 | Not specified | TERMINATED | The NIH UNI Study: Urea Cycle Disorders, Nutrition and Immunity |
| NCT03655223 | Not specified | ENROLLING_BY_INVITATION | Early Check: Expanded Screening in Newborns |
| NCT04612764 | Not specified | ACTIVE_NOT_RECRUITING | Liver Disease in Urea Cycle Disorders |
| NCT04908319 | Not specified | RECRUITING | Hepatic Histopathology in Urea Cycle Disorders |
| NCT05412160 | Not specified | COMPLETED | Improving Quality of Life and Daily Life Activities With Bioarginine in Patients With COPD |
| NCT05687474 | Not specified | COMPLETED | Baby Detect : Genomic Newborn Screening |
| NCT05910151 | Not specified | UNKNOWN | Selective Screening of Children for Hereditary Metabolic Diseases by Tandem Mass Spectrometry in Kazakhstan |
Related Atlas pages
- Associated diseases: arginase deficiency
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): arginase deficiency, intellectual disability, autosomal recessive 18