ARHGAP31-AS1

Summary

ARHGAP31-AS1 (ARHGAP31 antisense RNA 1, HGNC:41235) is a long non-coding RNA gene on chromosome 3q13.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41235
Approved symbol	ARHGAP31-AS1
Name	ARHGAP31 antisense RNA 1
Location	3q13.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000241155
Ensembl biotype	lncRNA
Entrez	100874246
RNAcentral	URS00001B54E5 — lncRNA, 624 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000466292, ENST00000840726

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000466292 — 2 exons

Exon	Start	End
ENSE00001867379	119322614	119322760
ENSE00001885437	119314293	119314769

Expression profiles

Bgee: expression breadth ubiquitous, 131 present calls, max score 96.69.

FANTOM5 (CAGE): breadth broad, TPM avg 1.5307 / max 96.9316, expressed in 296 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
43978	0.7347	192
43979	0.5984	119
43977	0.1976	61

Top tissues by expression

131 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	96.69	gold quality
colonic epithelium	UBERON:0000397	78.69	gold quality
sural nerve	UBERON:0015488	77.85	gold quality
bone marrow cell	CL:0002092	77.63	gold quality
calcaneal tendon	UBERON:0003701	76.58	gold quality
monocyte	CL:0000576	72.29	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	72.11	gold quality
tibial nerve	UBERON:0001323	70.34	gold quality
bone marrow	UBERON:0002371	69.75	gold quality
ventricular zone	UBERON:0003053	69.19	gold quality
left ovary	UBERON:0002119	67.14	gold quality
ovary	UBERON:0000992	66.78	gold quality
lower esophagus muscularis layer	UBERON:0035833	66.58	gold quality
lower esophagus	UBERON:0013473	66.55	gold quality
right ovary	UBERON:0002118	64.97	gold quality
ganglionic eminence	UBERON:0004023	64.97	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	64.64	gold quality
cortical plate	UBERON:0005343	64.47	gold quality
mucosa of stomach	UBERON:0001199	64.38	gold quality
muscle layer of sigmoid colon	UBERON:0035805	64.32	gold quality
rectum	UBERON:0001052	64.19	gold quality
left uterine tube	UBERON:0001303	63.93	gold quality
subcutaneous adipose tissue	UBERON:0002190	63.81	gold quality
popliteal artery	UBERON:0002250	63.66	gold quality
tibial artery	UBERON:0007610	63.65	gold quality
smooth muscle tissue	UBERON:0001135	63.55	gold quality
body of uterus	UBERON:0009853	63.24	gold quality
adipose tissue	UBERON:0001013	63.08	gold quality
right lung	UBERON:0002167	63.05	gold quality
hindlimb stylopod muscle	UBERON:0004252	62.82	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.93

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.