ARHGAP42-AS1

Summary

ARHGAP42-AS1 (ARHGAP42 antisense RNA 1, HGNC:54801) is a long non-coding RNA gene on chromosome 11q22.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54801
Approved symbol	ARHGAP42-AS1
Name	ARHGAP42 antisense RNA 1
Location	11q22.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	AK124326
Ensembl gene	ENSG00000248027
Ensembl biotype	lncRNA
Entrez	100128386
RNAcentral	URS00008E39C0 — lncRNA, 1883 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000501397, ENST00000835962

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000501397 — 2 exons

Exon	Start	End
ENSE00004254940	100687633	100687968
ENSE00004254943	100684161	100685703

Expression profiles

Bgee: expression breadth ubiquitous, 115 present calls, max score 90.14.

Top tissues by expression

115 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	90.14	gold quality
ventricular zone	UBERON:0003053	62.21	gold quality
ganglionic eminence	UBERON:0004023	61.04	gold quality
skeletal muscle tissue	UBERON:0001134	59.62	silver quality
skin of leg	UBERON:0001511	57.31	gold quality
stromal cell of endometrium	CL:0002255	57.30	gold quality
zone of skin	UBERON:0000014	55.63	gold quality
sural nerve	UBERON:0015488	55.51	silver quality
skin of abdomen	UBERON:0001416	53.24	gold quality
hindlimb stylopod muscle	UBERON:0004252	53.03	gold quality
placenta	UBERON:0001987	52.48	gold quality
prefrontal cortex	UBERON:0000451	52.43	gold quality
cortex of kidney	UBERON:0001225	51.72	gold quality
monocyte	CL:0000576	51.04	gold quality
calcaneal tendon	UBERON:0003701	50.86	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	50.78	gold quality
superior frontal gyrus	UBERON:0002661	50.70	gold quality
endometrium	UBERON:0001295	50.38	gold quality
muscle of leg	UBERON:0001383	50.20	gold quality
islet of Langerhans	UBERON:0000006	49.99	gold quality
gastrocnemius	UBERON:0001388	49.95	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	49.91	gold quality
duodenum	UBERON:0002114	49.49	gold quality
lymph node	UBERON:0000029	49.26	silver quality
pancreas	UBERON:0001264	49.17	gold quality
endocervix	UBERON:0000458	48.89	gold quality
gall bladder	UBERON:0002110	48.84	gold quality
adrenal tissue	UBERON:0018303	48.44	gold quality
liver	UBERON:0002107	48.28	silver quality
tibial nerve	UBERON:0001323	48.17	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.28

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.