ARID1B-AS1

Summary

ARID1B-AS1 (ARID1B antisense RNA 1, HGNC:40826) is a long non-coding RNA gene on chromosome 6q25.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40826
Approved symbol	ARID1B-AS1
Name	ARID1B antisense RNA 1
Location	6q25.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000233044
Ensembl biotype	lncRNA
Entrez	139637956

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000442936

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000442936 — 2 exons

Exon	Start	End
ENSE00001770220	157107727	157108016
ENSE00001800676	157119574	157119706

Expression profiles

Bgee: expression breadth ubiquitous, 111 present calls, max score 87.93.

Top tissues by expression

111 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.93	gold quality
colonic epithelium	UBERON:0000397	80.93	gold quality
bone marrow cell	CL:0002092	76.08	gold quality
calcaneal tendon	UBERON:0003701	74.14	gold quality
corpus callosum	UBERON:0002336	73.27	gold quality
bone marrow	UBERON:0002371	70.46	gold quality
hindlimb stylopod muscle	UBERON:0004252	68.63	gold quality
skeletal muscle tissue	UBERON:0001134	67.73	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	66.69	gold quality
tonsil	UBERON:0002372	65.54	gold quality
adrenal tissue	UBERON:0018303	62.39	gold quality
lymph node	UBERON:0000029	59.55	gold quality
liver	UBERON:0002107	59.36	gold quality
duodenum	UBERON:0002114	58.82	gold quality
blood	UBERON:0000178	58.46	gold quality
kidney	UBERON:0002113	58.17	gold quality
urinary bladder	UBERON:0001255	57.66	gold quality
muscle of leg	UBERON:0001383	56.33	gold quality
monocyte	CL:0000576	55.82	gold quality
gall bladder	UBERON:0002110	55.38	gold quality
islet of Langerhans	UBERON:0000006	55.11	gold quality
right lobe of liver	UBERON:0001114	54.69	gold quality
uterine cervix	UBERON:0000002	53.90	gold quality
adult mammalian kidney	UBERON:0000082	53.75	gold quality
primary visual cortex	UBERON:0002436	53.11	gold quality
prefrontal cortex	UBERON:0000451	53.07	gold quality
lower esophagus mucosa	UBERON:0035834	53.04	gold quality
gastrocnemius	UBERON:0001388	53.03	gold quality
adrenal gland	UBERON:0002369	52.68	gold quality
cortex of kidney	UBERON:0001225	52.61	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.99

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.