ARNT2-AS3

Summary

ARNT2-AS3 (ARNT2 antisense RNA 3, HGNC:58467) is a long non-coding RNA gene on chromosome 15q25.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58467
Approved symbol	ARNT2-AS3
Name	ARNT2 antisense RNA 3
Location	15q25.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259175
Ensembl biotype	lncRNA
Entrez	101929586

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000558208

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000558208 — 3 exons

Exon	Start	End
ENSE00002550002	80554609	80556933
ENSE00002551298	80560056	80560167
ENSE00002554186	80562862	80562944

Expression profiles

Bgee: expression breadth broad, 43 present calls, max score 73.39.

Top tissues by expression

43 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	73.39	silver quality
sural nerve	UBERON:0015488	64.68	silver quality
endometrium	UBERON:0001295	54.29	silver quality
blood	UBERON:0000178	54.09	silver quality
primary visual cortex	UBERON:0002436	50.10	gold quality
urinary bladder	UBERON:0001255	49.78	silver quality
prefrontal cortex	UBERON:0000451	49.19	gold quality
superior frontal gyrus	UBERON:0002661	47.89	silver quality
lung	UBERON:0002048	46.59	silver quality
corpus callosum	UBERON:0002336	46.43	silver quality
gastrocnemius	UBERON:0001388	45.86	silver quality
frontal cortex	UBERON:0001870	45.30	gold quality
myometrium	UBERON:0001296	45.06	silver quality
kidney	UBERON:0002113	44.03	silver quality
body of pancreas	UBERON:0001150	44.02	silver quality
adult mammalian kidney	UBERON:0000082	43.75	silver quality
substantia nigra	UBERON:0002038	43.07	gold quality
cerebral cortex	UBERON:0000956	42.35	gold quality
temporal lobe	UBERON:0001871	42.16	silver quality
body of uterus	UBERON:0009853	42.01	silver quality
right frontal lobe	UBERON:0002810	41.38	gold quality
Ammon’s horn	UBERON:0001954	41.20	silver quality
brain	UBERON:0000955	41.18	silver quality
cerebellar hemisphere	UBERON:0002245	41.01	silver quality
heart	UBERON:0000948	40.60	silver quality
putamen	UBERON:0001874	40.06	silver quality
stomach	UBERON:0000945	39.75	silver quality
esophagus	UBERON:0001043	39.72	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	39.62	silver quality
tibial nerve	UBERON:0001323	39.61	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.