ARRB1
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Summary
ARRB1 (arrestin beta 1, HGNC:711) is a protein-coding gene on chromosome 11q13.4, encoding Beta-arrestin-1 (P49407). Functions in regulating agonist-mediated G-protein coupled receptor (GPCR) signaling by mediating both receptor desensitization and resensitization processes.
Members of arrestin/beta-arrestin protein family are thought to participate in agonist-mediated desensitization of G-protein-coupled receptors and cause specific dampening of cellular responses to stimuli such as hormones, neurotransmitters, or sensory signals. Arrestin beta 1 is a cytosolic protein and acts as a cofactor in the beta-adrenergic receptor kinase (BARK) mediated desensitization of beta-adrenergic receptors. Besides the central nervous system, it is expressed at high levels in peripheral blood leukocytes, and thus the BARK/beta-arrestin system is believed to play a major role in regulating receptor-mediated immune functions. Alternatively spliced transcripts encoding different isoforms of arrestin beta 1 have been described.
Source: NCBI Gene 408 — RefSeq curated summary.
At a glance
- GWAS associations: 2
- Clinical variants (ClinVar): 60 total
- Druggable target: yes
- MANE Select transcript:
NM_004041
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:711 |
| Approved symbol | ARRB1 |
| Name | arrestin beta 1 |
| Location | 11q13.4 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000137486 |
| Ensembl biotype | protein_coding |
| OMIM | 107940 |
| Entrez | 408 |
Gene structure
Transcript identifiers
Ensembl transcripts: 23 — 15 protein_coding, 5 retained_intron, 3 nonsense_mediated_decay
ENST00000360025, ENST00000420843, ENST00000524400, ENST00000527385, ENST00000529280, ENST00000529741, ENST00000530086, ENST00000531012, ENST00000532447, ENST00000532525, ENST00000533255, ENST00000533609, ENST00000862392, ENST00000862393, ENST00000862394, ENST00000862395, ENST00000862396, ENST00000862397, ENST00000928507, ENST00000952724, ENST00000952725, ENST00000952726, ENST00000952727
RefSeq mRNA: 2 — MANE Select: NM_004041
NM_004041, NM_020251
CCDS: CCDS31640, CCDS44684
Canonical transcript exons
ENST00000420843 — 16 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000927589 | 75267652 | 75267703 |
| ENSE00000927594 | 75277364 | 75277448 |
| ENSE00000927595 | 75278609 | 75278744 |
| ENSE00001238499 | 75268889 | 75268959 |
| ENSE00001752193 | 75271701 | 75271724 |
| ENSE00002189681 | 75260122 | 75266274 |
| ENSE00003478208 | 75283287 | 75283483 |
| ENSE00003503523 | 75274074 | 75274211 |
| ENSE00003524426 | 75290009 | 75290039 |
| ENSE00003536482 | 75287315 | 75287375 |
| ENSE00003558831 | 75272895 | 75272978 |
| ENSE00003566059 | 75284235 | 75284279 |
| ENSE00003593647 | 75281075 | 75281142 |
| ENSE00003615650 | 75276839 | 75276911 |
| ENSE00003621626 | 75281962 | 75282021 |
| ENSE00003849621 | 75351588 | 75351661 |
Expression profiles
Bgee: expression breadth ubiquitous, 248 present calls, max score 96.26.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 24.8167 / max 208.0069, expressed in 1683 samples.
FANTOM5 promoters (10 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 121345 | 9.5323 | 1426 |
| 121347 | 6.4412 | 1387 |
| 121346 | 4.1440 | 1229 |
| 121344 | 2.4128 | 895 |
| 121349 | 1.3732 | 326 |
| 121338 | 0.4300 | 253 |
| 121348 | 0.2334 | 112 |
| 121341 | 0.0974 | 52 |
| 121350 | 0.0771 | 43 |
| 121342 | 0.0753 | 49 |
Top tissues by expression
280 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| monocyte | CL:0000576 | 96.26 | gold quality |
| leukocyte | CL:0000738 | 95.27 | gold quality |
| mononuclear cell | CL:0000842 | 95.27 | gold quality |
| granulocyte | CL:0000094 | 95.07 | gold quality |
| right lung | UBERON:0002167 | 93.02 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 92.92 | gold quality |
| adrenal tissue | UBERON:0018303 | 92.83 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 92.74 | gold quality |
| sural nerve | UBERON:0015488 | 92.61 | gold quality |
| cingulate cortex | UBERON:0003027 | 92.58 | gold quality |
| upper lobe of lung | UBERON:0008948 | 92.52 | gold quality |
| cortical plate | UBERON:0005343 | 92.50 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 92.35 | gold quality |
| right frontal lobe | UBERON:0002810 | 92.15 | gold quality |
| prefrontal cortex | UBERON:0000451 | 92.09 | gold quality |
| nucleus accumbens | UBERON:0001882 | 92.09 | gold quality |
| body of stomach | UBERON:0001161 | 91.99 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 91.90 | gold quality |
| mucosa of stomach | UBERON:0001199 | 91.84 | gold quality |
| lower esophagus | UBERON:0013473 | 91.82 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 91.17 | gold quality |
| stomach | UBERON:0000945 | 91.12 | gold quality |
| apex of heart | UBERON:0002098 | 90.83 | gold quality |
| caudate nucleus | UBERON:0001873 | 90.66 | gold quality |
| amygdala | UBERON:0001876 | 90.61 | gold quality |
| medial globus pallidus | UBERON:0002477 | 90.43 | gold quality |
| blood | UBERON:0000178 | 90.19 | gold quality |
| colonic epithelium | UBERON:0000397 | 89.97 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 89.82 | gold quality |
| transverse colon | UBERON:0001157 | 89.78 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 9.17 |
| E-MTAB-6386 | no | 13.62 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
315 targeting ARRB1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6867-5P | 100.00 | 82.21 | 3464 |
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-4481 | 100.00 | 66.42 | 1669 |
| HSA-MIR-4692 | 100.00 | 67.32 | 2066 |
| HSA-MIR-3064-3P | 100.00 | 70.09 | 1254 |
| HSA-MIR-4768-5P | 100.00 | 69.49 | 2861 |
| HSA-MIR-4747-5P | 100.00 | 67.90 | 2681 |
| HSA-MIR-5196-5P | 100.00 | 67.98 | 2761 |
| HSA-MIR-3925-3P | 100.00 | 69.95 | 1237 |
| HSA-MIR-4531 | 99.99 | 69.70 | 3181 |
| HSA-MIR-6077 | 99.99 | 68.04 | 2299 |
| HSA-MIR-6870-5P | 99.99 | 68.55 | 2115 |
| HSA-MIR-1184 | 99.99 | 68.19 | 1458 |
| HSA-MIR-4514 | 99.99 | 67.10 | 1870 |
| HSA-MIR-150-5P | 99.99 | 66.69 | 1976 |
| HSA-MIR-3667-3P | 99.99 | 67.17 | 1636 |
| HSA-MIR-4715-3P | 99.98 | 66.03 | 670 |
| HSA-MIR-4723-5P | 99.97 | 68.70 | 2034 |
| HSA-MIR-5698 | 99.97 | 68.49 | 2029 |
| HSA-MIR-7111-5P | 99.97 | 68.48 | 2062 |
| HSA-MIR-507 | 99.97 | 70.11 | 1915 |
| HSA-MIR-6825-5P | 99.96 | 69.81 | 3431 |
| HSA-MIR-4725-3P | 99.96 | 69.53 | 2520 |
| HSA-MIR-6780B-5P | 99.96 | 69.60 | 2562 |
| HSA-MIR-557 | 99.96 | 70.01 | 1640 |
| HSA-MIR-545-3P | 99.95 | 70.74 | 2783 |
| HSA-MIR-185-3P | 99.95 | 67.01 | 1743 |
| HSA-MIR-141-3P | 99.94 | 72.79 | 2421 |
| HSA-MIR-200A-3P | 99.94 | 72.68 | 2420 |
| HSA-MIR-4525 | 99.94 | 64.38 | 675 |
Literature-anchored findings (GeneRIF, showing 40)
- Determinants in the receptor’s core (Asn-289 and Lys-382) appear to regulate internalization of the receptor/beta-arrestin complex toward early endocytic endosomes during the initial step of endocytosis. (PMID:11726668)
- findings suggest that beta-arrestin 1 acts as an effector for a novel function of PTHrP in cytoplasm (PMID:12220636)
- role of beta-arrestin, dynamin, and clathrin-dependent pathway in internalization of the complement 5a anaphylatoxin receptor (PMID:12464600)
- subcellular localization is determined by their intact N domain and the nuclear export signal at the C terminus (PMID:12538596)
- examination of desensitization, internalization, and signaling functions demonstrated by RNA interference (PMID:12582207)
- both beta-arrestin1 recruitment and the presence of Ser/Thr residues in the distal half of the C-terminal domain were necessary for maximal agonist-induced internalization (PMID:14709160)
- results suggest that physiological levels of beta-arrestin1 may act as “dominant-negative” inhibitors of beta-arrestin2-mediated extracellular signal-regulated kinases 1 and 2 activation (PMID:14711824)
- D6 is constitutively internalized via a ligand-independent, phosphorylation-independent association with beta-arrestin. (PMID:15084596)
- protease-activated receptor-2-mediated migration of tumor cells requires both beta-arrestin-1 and -2 (PMID:15489220)
- c-Src has a role in regulating the dissociation of AP-2 from agonist-occupied AT1R and beta-arrestin during the clathrin-mediated internalization of receptors (PMID:15498833)
- Mononuclear leukocytes of patients with depression showed significantly reduced immunoreactive quantities of beta-arrestin-1 (PMID:15514408)
- beta-Arrestin 1 and Galphaq/11 have roles in activating RhoA and stress fiber formation following receptor stimulation (PMID:15611106)
- beta-Arrestins bind and decrease cell-surface abundance of the Na+/H+ exchanger NHE5 isoform. (PMID:15699339)
- beta-arrestin has a role in ubiquitination and down-regulation of the insulin-like growth factor-1 receptor by acting as adaptor for the MDM2 E3 ligase (PMID:15878855)
- Endogenous beta-arrestin1 functions exclusively in the phosphorylation-dependent receptor internalization, whereas endogenous beta-arrestin2, but not beta-arrestin1, is required for the phosphorylation-independent receptor internalization. (PMID:16181421)
- the beta2 adrenergic receptor has a role in beta-arrestin-dependent, G protein-independent ERK1/2 activation (PMID:16280323)
- results suggest that a GPCR conformation directed by the second intracellular loop, likely using the loop itself as a binding patch, may function as a switch for transitioning beta-arrestin from its inactive form to its active receptor-binding state. (PMID:16319069)
- beta-arrestin 1 is a mediator of cellular migration and metastasis (PMID:16432186)
- beta-arrestin and G proteins activate parathyroid hormone receptor-stimulated ERK1/2 pathways (PMID:16492667)
- Our results show that PAR1-mediated activation of Src and ERK1/2 in HEK 293 cells was increased with overexpression of beta-arrestin1 or depletion of beta-arrestin2. (PMID:16580177)
- ERK1/2 is activated by a chimeric neurokinin 1 receptor-beta-arrestin1 fusion protein (PMID:16670094)
- Platelet-activating factor signaling requires beta-arrestin-1 recruitment of a p38 MAP kinase signalosome for transduction before neutrophil endosomal scission. (PMID:16709866)
- analysis of the G protein-coupled receptor kinase and beta-arrestin-mediated desensitization of the angiotensin II type 1A receptor (PMID:17008309)
- results demonstrate the ability of beta-arrestins to recruit diacylglycerol kinases to ligand-activated M1 muscarinic receptors (PMID:17272726)
- Data show that 5-HT(4) receptor stimulation in primary neurons produced a potent but transient activation of the ERK pathway that is dependent on Src tyrosine kinase but totally independent of beta-arrestin. (PMID:17377064)
- MS patients had a greater prevalence of positive T-cell proliferative responses to neuron-specific enolase [NSE], retinal arrestin, and beta-arrestin than healthy controls (p<0.0001). (PMID:17436063)
- ARRB1 and ARRB2 play an important role in biological processes involved in the regulation of smoking urgency (that is time to smoke first cigarette). (PMID:17579607)
- data suggest cells ruffle upon CaSR (calcium sensing receptor)stimulation via a mechanism that involves translocation of beta-arrestin 1 pre-assembled with the CaSR or ARNO (Arf nucleotide binding site opener) (PMID:17623778)
- overexpression of beta-Arr1 promotes matrix metalloproteinase 9 activity and tumor angiogenesis by providing a suitable microenvironment for tumor progression (PMID:17890288)
- Examined interactions between phosphodiesterase 4D5 (PDE4D5) and beta-arrestin and RACK1. (PMID:17900862)
- the AIP4.arrestin-2 complex functions on endosomes to regulate sorting of CXCR4 into the degradative pathway (PMID:17947233)
- beta-arrestins regulate protein synthesis (PMID:18276584)
- beta-arrestins direct the localization of PIP5K Ialpha and PIP(2) production to agonist-activated 7TMRs, thereby regulating receptor internalization (PMID:18534983)
- analysis of the protein kinase A-independent, beta-arrestin-1-dependent signaling pathway for p38 mitogen-activated protein kinase activation by beta2-adrenergic receptors (PMID:18678875)
- Agonist-selective, receptor-specific interaction of human P2Y receptors with beta-arrestin-1 and -2. (PMID:18703513)
- Results identify novel functions of beta-arrestin1 in binding to the beta1gamma2 subunits of heterotrimeric G-proteins and promoting G(betagamma)-mediated Akt signalling for NF-kappaB activation. (PMID:18729826)
- These findings demonstrate that physical interaction of CaM with recombinant and native 5-HT(2C) receptors is critical for G protein-independent, arrestin-dependent receptor signaling. (PMID:18768750)
- Results reveal that nuclear beta-arrestin1, acting as a scaffold for the dephosphorylation of STAT1, is an essential negative regulator of IFN-gamma signaling and participates in the IFN-gamma-induced cellular antiviral response. (PMID:18775329)
- These results show that G(i2) protein is involved in D(2)R-mediated ERK activation but beta-arrestins 1 and 2 are either not involved or play minor role. (PMID:18940181)
- MEK1 binds directly to betaarrestin1, influencing both its phosphorylation by ERK and the timing of its isoprenaline-stimulated internalization (PMID:19153083)
Cross-species orthologs
6 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | arrb1 | ENSDARG00000043241 |
| mus_musculus | Arrb1 | ENSMUSG00000018909 |
| rattus_norvegicus | Arrb1 | ENSRNOG00000030404 |
| rattus_norvegicus | ENSRNOG00000063241 | |
| drosophila_melanogaster | krz | FBGN0040206 |
| caenorhabditis_elegans | WBGENE00000195 |
Paralogs (3): ARR3 (ENSG00000120500), SAG (ENSG00000130561), ARRB2 (ENSG00000141480)
Protein
Protein identifiers
Beta-arrestin-1 — P49407 (reviewed: P49407)
Alternative names: Arrestin beta-1, Non-visual arrestin-2
All UniProt accessions (6): E9PM35, P49407, H0YD81, H0YDS1, H0YEQ2, H0YET9
UniProt curated annotations — full annotation on UniProt →
Function. Functions in regulating agonist-mediated G-protein coupled receptor (GPCR) signaling by mediating both receptor desensitization and resensitization processes. During homologous desensitization, beta-arrestins bind to the GPRK-phosphorylated receptor and sterically preclude its coupling to the cognate G-protein; the binding appears to require additional receptor determinants exposed only in the active receptor conformation. The beta-arrestins target many receptors for internalization by acting as endocytic adapters (CLASPs, clathrin-associated sorting proteins) and recruiting the GPRCs to the adapter protein 2 complex 2 (AP-2) in clathrin-coated pits (CCPs). However, the extent of beta-arrestin involvement appears to vary significantly depending on the receptor, agonist and cell type. Internalized arrestin-receptor complexes traffic to intracellular endosomes, where they remain uncoupled from G-proteins. Two different modes of arrestin-mediated internalization occur. Class A receptors, like ADRB2, OPRM1, ENDRA, D1AR and ADRA1B dissociate from beta-arrestin at or near the plasma membrane and undergo rapid recycling. Class B receptors, like AVPR2, AGTR1, NTSR1, TRHR and TACR1 internalize as a complex with arrestin and traffic with it to endosomal vesicles, presumably as desensitized receptors, for extended periods of time. Receptor resensitization then requires that receptor-bound arrestin is removed so that the receptor can be dephosphorylated and returned to the plasma membrane. Involved in internalization of P2RY4 and UTP-stimulated internalization of P2RY2. Involved in phosphorylation-dependent internalization of OPRD1 ands subsequent recycling. Involved in the degradation of cAMP by recruiting cAMP phosphodiesterases to ligand-activated receptors. Beta-arrestins function as multivalent adapter proteins that can switch the GPCR from a G-protein signaling mode that transmits short-lived signals from the plasma membrane via small molecule second messengers and ion channels to a beta-arrestin signaling mode that transmits a distinct set of signals that are initiated as the receptor internalizes and transits the intracellular compartment. Acts as a signaling scaffold for MAPK pathways such as MAPK1/3 (ERK1/2). ERK1/2 activated by the beta-arrestin scaffold is largely excluded from the nucleus and confined to cytoplasmic locations such as endocytic vesicles, also called beta-arrestin signalosomes. Recruits c-Src/SRC to ADRB2 resulting in ERK activation. GPCRs for which the beta-arrestin-mediated signaling relies on both ARRB1 and ARRB2 (codependent regulation) include ADRB2, F2RL1 and PTH1R. For some GPCRs the beta-arrestin-mediated signaling relies on either ARRB1 or ARRB2 and is inhibited by the other respective beta-arrestin form (reciprocal regulation). Inhibits ERK1/2 signaling in AGTR1- and AVPR2-mediated activation (reciprocal regulation). Is required for SP-stimulated endocytosis of NK1R and recruits c-Src/SRC to internalized NK1R resulting in ERK1/2 activation, which is required for the antiapoptotic effects of SP. Is involved in proteinase-activated F2RL1-mediated ERK activity. Acts as a signaling scaffold for the AKT1 pathway. Is involved in alpha-thrombin-stimulated AKT1 signaling. Is involved in IGF1-stimulated AKT1 signaling leading to increased protection from apoptosis. Involved in activation of the p38 MAPK signaling pathway and in actin bundle formation. Involved in F2RL1-mediated cytoskeletal rearrangement and chemotaxis. Involved in AGTR1-mediated stress fiber formation by acting together with GNAQ to activate RHOA. Appears to function as signaling scaffold involved in regulation of MIP-1-beta-stimulated CCR5-dependent chemotaxis. Involved in attenuation of NF-kappa-B-dependent transcription in response to GPCR or cytokine stimulation by interacting with and stabilizing CHUK. May serve as nuclear messenger for GPCRs. Involved in OPRD1-stimulated transcriptional regulation by translocating to CDKN1B and FOS promoter regions and recruiting EP300 resulting in acetylation of histone H4. Involved in regulation of LEF1 transcriptional activity via interaction with DVL1 and/or DVL2 Also involved in regulation of receptors other than GPCRs. Involved in Toll-like receptor and IL-1 receptor signaling through the interaction with TRAF6 which prevents TRAF6 autoubiquitination and oligomerization required for activation of NF-kappa-B and JUN. Binds phosphoinositides. Binds inositolhexakisphosphate (InsP6). Involved in IL8-mediated granule release in neutrophils. Required for atypical chemokine receptor ACKR2-induced RAC1-LIMK1-PAK1-dependent phosphorylation of cofilin (CFL1) and for the up-regulation of ACKR2 from endosomal compartment to cell membrane, increasing its efficiency in chemokine uptake and degradation. Involved in the internalization of the atypical chemokine receptor ACKR3. Negatively regulates the NOTCH signaling pathway by mediating the ubiquitination and degradation of NOTCH1 by ITCH. Participates in the recruitment of the ubiquitin-protein ligase to the receptor. Involved in some MRGPRE-mediated signaling required to improve glucose tolerance: promotes phosphorylation of ALDOA downstream of MRGPRE activation, increasing glycolysis and leading to GLP-1 secretion.
Subunit / interactions. Monomer. Homodimer. Homooligomer; the self-association is mediated by InsP6-binding. Heterooligomer with ARRB2; the association is mediated by InsP6-binding. Interacts with GPR143. Interacts with ADRB2 (phosphorylated). Interacts with CHRM2 (phosphorylated). Interacts with LHCGR. Interacts with CYTH2 and CASR. Interacts with AP2B1 (dephosphorylated at ‘Tyr-737’); phosphorylation of AP2B1 at ‘Tyr-737’ disrupts the interaction. Interacts (dephosphorylated at Ser-412) with CLTC. Interacts with CCR2 and GRK2. Interacts with CRR5. Interacts with PTAFR (phosphorylated on serine residues). Interacts with CLTC and MAP2K3. Interacts with CREB1. Interacts with TRAF6. Interacts with IGF1R and MDM2. Interacts with C5AR1. Interacts with PDE4D. Interacts with SRC (via the SH3 domain and the protein kinase domain); the interaction is independent of the phosphorylation state of SRC C-terminus. Interacts with TACR1. Interacts with RAF1. Interacts with CHUK, IKBKB and MAP3K14. Interacts with DVL1; the interaction is enhanced by phosphorylation of DVL1. Interacts with DVL2; the interaction is enhanced by phosphorylation of DVL2. Interacts with IGF1R. Associates with MAP kinase p38. Part of a MAPK signaling complex consisting of TACR1, ARRB1, SRC, MAPK1 (activated) and MAPK3 (activated). Part of a MAPK signaling complex consisting of F2RL1, ARRB1, RAF1, MAPK1 (activated) and MAPK3 (activated). Interacts with MAP2K4/MKK4. Interacts with HCK and CXCR1 (phosphorylated). Interacts with ACKR3 and ACKR4. Interacts with ARRDC1; the interaction is direct. Interacts with GPR61, GPR62 and GPR135.
Subcellular location. Cytoplasm. Nucleus. Cell membrane. Membrane. Clathrin-coated pit. Cell projection. Pseudopodium. Cytoplasmic vesicle.
Post-translational modifications. Constitutively phosphorylated at Ser-412 in the cytoplasm. At the plasma membrane, is rapidly dephosphorylated, a process that is required for clathrin binding and ADRB2 endocytosis but not for ADRB2 binding and desensitization. Once internalized, is rephosphorylated. The ubiquitination status appears to regulate the formation and trafficking of beta-arrestin-GPCR complexes and signaling. Ubiquitination appears to occur GPCR-specific. Ubiquitinated by MDM2; the ubiquitination is required for rapid internalization of ADRB2. Deubiquitinated by USP33; the deubiquitination leads to a dissociation of the beta-arrestin-GPCR complex. Stimulation of a class A GPCR, such as ADRB2, induces transient ubiquitination and subsequently promotes association with USP33.
Domain organisation. The [DE]-X(1,2)-F-X-X-[FL]-X-X-X-R motif mediates interaction the AP-2 complex subunit AP2B1. Binding to phosphorylated GPCRs induces a conformationanl change that exposes the motif to the surface. The N-terminus binds InsP6 with low affinity. The C-terminus binds InsP6 with high affinity.
Similarity. Belongs to the arrestin family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P49407-1 | 1A | yes |
| P49407-2 | 1B |
RefSeq proteins (2): NP_004032, NP_064647 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000698 | Arrestin | Family |
| IPR011021 | Arrestin-like_N | Domain |
| IPR011022 | Arrestin-like_C | Domain |
| IPR014752 | Arrestin-like_C_sf | Homologous_superfamily |
| IPR014753 | Arrestin_N | Homologous_superfamily |
| IPR014756 | Ig_E-set | Homologous_superfamily |
| IPR017864 | Arrestin_CS | Conserved_site |
Pfam: PF00339, PF02752
UniProt features (64 total): strand 29, sequence conflict 7, helix 7, region of interest 5, binding site 4, mutagenesis site 4, modified residue 2, turn 2, chain 1, splice variant 1, short sequence motif 1, compositionally biased region 1
Structure
Experimental structures (PDB)
32 structures, top 30 by resolution.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 8AS4 | X-RAY DIFFRACTION | 2.3 |
| 8ZYT | ELECTRON MICROSCOPY | 2.65 |
| 8ZYU | ELECTRON MICROSCOPY | 2.65 |
| 2IV8 | X-RAY DIFFRACTION | 2.8 |
| 8ZYY | ELECTRON MICROSCOPY | 2.83 |
| 9UYN | ELECTRON MICROSCOPY | 2.9 |
| 9LXR | ELECTRON MICROSCOPY | 3.07 |
| 9LY2 | ELECTRON MICROSCOPY | 3.1 |
| 9MBA | ELECTRON MICROSCOPY | 3.14 |
| 8AS2 | X-RAY DIFFRACTION | 3.2 |
| 9LXP | ELECTRON MICROSCOPY | 3.2 |
| 9UYI | ELECTRON MICROSCOPY | 3.2 |
| 9L8L | ELECTRON MICROSCOPY | 3.22 |
| 6TKO | ELECTRON MICROSCOPY | 3.3 |
| 7SRS | ELECTRON MICROSCOPY | 3.3 |
| 8JRV | ELECTRON MICROSCOPY | 3.3 |
| 9UYH | ELECTRON MICROSCOPY | 3.3 |
| 9UYJ | ELECTRON MICROSCOPY | 3.3 |
| 9UYL | ELECTRON MICROSCOPY | 3.3 |
| 9LY3 | ELECTRON MICROSCOPY | 3.4 |
| 9M0D | ELECTRON MICROSCOPY | 3.41 |
| 8AS3 | X-RAY DIFFRACTION | 3.5 |
| 9UYM | ELECTRON MICROSCOPY | 3.5 |
| 8WRZ | ELECTRON MICROSCOPY | 3.6 |
| 9IJS | ELECTRON MICROSCOPY | 3.64 |
| 9II2 | ELECTRON MICROSCOPY | 3.7 |
| 9IJR | ELECTRON MICROSCOPY | 3.86 |
| 9II3 | ELECTRON MICROSCOPY | 3.9 |
| 6UP7 | ELECTRON MICROSCOPY | 4.2 |
| 7R0J | ELECTRON MICROSCOPY | 4.23 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P49407-F1 | 82.44 | 0.55 |
Antibody-complex structures (SAbDab): 21 — 6PWC, 6TKO, 7R0C, 7R0J, 7SRS, 8AS2, 8AS3, 8WRZ, 8ZYU, 9II2, 9II3, 9IJR, 9IJS, 9LXR, 9MBA, 9UYH, 9UYI, 9UYJ, 9UYL, 9UYM, 9UYN
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (4): 324; 326; 250; 255
Post-translational modifications (2): 47, 412
Mutagenesis-validated functional residues (4):
| Position | Phenotype |
|---|---|
| 169 | constitutive active; enables phosphorylation-independent binding to gpcrs. |
| 388 | abolishes interaction with ap2b1. |
| 390 | abolishes interaction with ap2b1. |
| 393 | abolishes interaction with ap2b1. |
Function
Pathways and Gene Ontology
Reactome pathways
41 pathways
| ID | Pathway |
|---|---|
| R-HSA-2122948 | Activated NOTCH1 Transmits Signal to the Nucleus |
| R-HSA-418555 | G alpha (s) signalling events |
| R-HSA-432720 | Lysosome Vesicle Biogenesis |
| R-HSA-432722 | Golgi Associated Vesicle Biogenesis |
| R-HSA-456926 | Thrombin signalling through proteinase activated receptors (PARs) |
| R-HSA-5635838 | Activation of SMO |
| R-HSA-5674135 | MAP2K and MAPK activation |
| R-HSA-5689880 | Ub-specific processing proteases |
| R-HSA-6802946 | Signaling by moderate kinase activity BRAF mutants |
| R-HSA-6802948 | Signaling by high-kinase activity BRAF mutants |
| R-HSA-6802952 | Signaling by BRAF and RAF1 fusions |
| R-HSA-6802955 | Paradoxical activation of RAF signaling by kinase inactive BRAF |
| R-HSA-8856825 | Cargo recognition for clathrin-mediated endocytosis |
| R-HSA-8856828 | Clathrin-mediated endocytosis |
| R-HSA-9649948 | Signaling downstream of RAS mutants |
| R-HSA-9656223 | Signaling by RAF1 mutants |
| R-HSA-9839389 | TGFBR3 regulates TGF-beta signaling |
| R-HSA-109582 | Hemostasis |
| R-HSA-157118 | Signaling by NOTCH |
| R-HSA-162582 | Signal Transduction |
| R-HSA-1643685 | Disease |
| R-HSA-1980143 | Signaling by NOTCH1 |
| R-HSA-199991 | Membrane Trafficking |
| R-HSA-199992 | trans-Golgi Network Vesicle Budding |
| R-HSA-372790 | Signaling by GPCR |
| R-HSA-388396 | GPCR downstream signalling |
| R-HSA-392499 | Metabolism of proteins |
| R-HSA-5358351 | Signaling by Hedgehog |
| R-HSA-5632684 | Hedgehog ‘on’ state |
| R-HSA-5653656 | Vesicle-mediated transport |
MSigDB gene sets: 520 (showing top):
GSE18804_SPLEEN_MACROPHAGE_VS_BRAIN_TUMORAL_MACROPHAGE_UP, GOBP_G_PROTEIN_COUPLED_RECEPTOR_INTERNALIZATION, REACTOME_SIGNALING_BY_NOTCH, GOBP_ACTIN_FILAMENT_BUNDLE_ORGANIZATION, GOBP_POSITIVE_REGULATION_OF_ENDOCYTOSIS, GOBP_REGULATION_OF_PHOSPHORYLATION, GOCC_VACUOLAR_MEMBRANE, PEREZ_TP63_TARGETS, REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION, KEGG_MAPK_SIGNALING_PATHWAY, GOBP_POSITIVE_REGULATION_OF_RHO_PROTEIN_SIGNAL_TRANSDUCTION, BIOCARTA_BARRESTIN_SRC_PATHWAY, GOBP_MACROMOLECULE_CATABOLIC_PROCESS, GOBP_REGULATION_OF_SMALL_GTPASE_MEDIATED_SIGNAL_TRANSDUCTION, GOBP_POSITIVE_REGULATION_OF_MAPK_CASCADE
GO Biological Process (25): intracellular glucose homeostasis (GO:0001678), positive regulation of protein phosphorylation (GO:0001934), desensitization of G protein-coupled receptor signaling pathway (GO:0002029), G protein-coupled receptor internalization (GO:0002031), positive regulation of receptor internalization (GO:0002092), regulation of transcription by RNA polymerase II (GO:0006357), ubiquitin-dependent protein catabolic process (GO:0006511), cell surface receptor signaling pathway (GO:0007166), sensory perception (GO:0007600), positive regulation of cardiac muscle hypertrophy (GO:0010613), protein transport (GO:0015031), protein ubiquitination (GO:0016567), negative regulation of protein ubiquitination (GO:0031397), obsolete negative regulation of NF-kappaB transcription factor activity (GO:0032088), negative regulation of interleukin-6 production (GO:0032715), negative regulation of interleukin-8 production (GO:0032717), positive regulation of Rho protein signal transduction (GO:0035025), stress fiber assembly (GO:0043149), proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161), negative regulation of Notch signaling pathway (GO:0045746), positive regulation of transcription by RNA polymerase II (GO:0045944), positive regulation of ERK1 and ERK2 cascade (GO:0070374), signal transduction (GO:0007165), negative regulation of signal transduction (GO:0009968), positive regulation of intracellular signal transduction (GO:1902533)
GO Molecular Function (11): G protein-coupled receptor binding (GO:0001664), transcription coactivator activity (GO:0003713), enzyme inhibitor activity (GO:0004857), GTPase activator activity (GO:0005096), insulin-like growth factor receptor binding (GO:0005159), ubiquitin protein ligase binding (GO:0031625), angiotensin receptor binding (GO:0031701), molecular adaptor activity (GO:0060090), arrestin family protein binding (GO:1990763), protein binding (GO:0005515), enzyme binding (GO:0019899)
GO Cellular Component (16): Golgi membrane (GO:0000139), chromatin (GO:0000785), nucleus (GO:0005634), nucleoplasm (GO:0005654), cytoplasm (GO:0005737), lysosomal membrane (GO:0005765), cytosol (GO:0005829), plasma membrane (GO:0005886), clathrin-coated pit (GO:0005905), nuclear body (GO:0016604), cytoplasmic vesicle membrane (GO:0030659), endocytic vesicle membrane (GO:0030666), pseudopodium (GO:0031143), cytoplasmic vesicle (GO:0031410), membrane (GO:0016020), cell projection (GO:0042995)
Reactome top-level categories
Rollup of top-13 pathways:
| Category | Pathways |
|---|---|
| Oncogenic MAPK signaling | 5 |
| trans-Golgi Network Vesicle Budding | 2 |
| Signaling by NOTCH1 | 1 |
| GPCR downstream signalling | 1 |
| Platelet activation, signaling and aggregation | 1 |
| Hedgehog ‘on’ state | 1 |
| RAF/MAP kinase cascade | 1 |
| Deubiquitination | 1 |
| Clathrin-mediated endocytosis | 1 |
| Membrane Trafficking | 1 |
| Signaling by RAS mutants | 1 |
| Signaling by TGFBR3 | 1 |
| Signal Transduction | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 6 |
| receptor internalization | 2 |
| protein ubiquitination | 2 |
| negative regulation of cytokine production | 2 |
| signaling receptor binding | 2 |
| binding | 2 |
| protein binding | 2 |
| bounding membrane of organelle | 2 |
| cytoplasm | 2 |
| membrane | 2 |
| glucose homeostasis | 1 |
| intracellular chemical homeostasis | 1 |
| regulation of protein phosphorylation | 1 |
| protein phosphorylation | 1 |
| positive regulation of protein modification process | 1 |
| positive regulation of phosphorylation | 1 |
| negative adaptation of signaling pathway | 1 |
| negative regulation of G protein-coupled receptor signaling pathway | 1 |
| desensitization of G protein-coupled receptor signaling pathway | 1 |
| regulation of receptor internalization | 1 |
| positive regulation of receptor-mediated endocytosis | 1 |
| regulation of DNA-templated transcription | 1 |
| transcription by RNA polymerase II | 1 |
| modification-dependent protein catabolic process | 1 |
| signal transduction | 1 |
| nervous system process | 1 |
| cardiac muscle hypertrophy | 1 |
| regulation of cardiac muscle hypertrophy | 1 |
| positive regulation of muscle hypertrophy | 1 |
| transport | 1 |
| intracellular protein localization | 1 |
| establishment of protein localization | 1 |
| protein modification by small protein conjugation | 1 |
| regulation of protein ubiquitination | 1 |
| negative regulation of protein modification by small protein conjugation or removal | 1 |
| interleukin-6 production | 1 |
| regulation of interleukin-6 production | 1 |
| interleukin-8 production | 1 |
| regulation of interleukin-8 production | 1 |
| Rho protein signal transduction | 1 |
Protein interactions and networks
STRING
3779 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ARRB1 | ADRB2 | P07550 | 999 |
| ARRB1 | SRC | P12931 | 995 |
| ARRB1 | AKT1 | P31749 | 985 |
| ARRB1 | GRK2 | P25098 | 982 |
| ARRB1 | AVPR2 | P30518 | 982 |
| ARRB1 | NTSR1 | P30989 | 968 |
| ARRB1 | AP2B1 | P21851 | 959 |
| ARRB1 | PDE4A | P27815 | 949 |
| ARRB1 | RAPGEF4 | Q8WZA2 | 945 |
| ARRB1 | RHO | P08100 | 944 |
| ARRB1 | RAPGEF3 | O95398 | 942 |
| ARRB1 | MDM2 | Q00987 | 935 |
| ARRB1 | ADRB1 | P08588 | 929 |
| ARRB1 | TACR1 | P25103 | 918 |
| ARRB1 | CXCR4 | P30991 | 918 |
IntAct
204 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| GNMT | ARRB1 | psi-mi:“MI:0915”(physical association) | 0.890 |
| ARRB1 | GNMT | psi-mi:“MI:0915”(physical association) | 0.890 |
| ARRB1 | GNMT | psi-mi:“MI:0403”(colocalization) | 0.890 |
| MAPK9 | ARRB1 | psi-mi:“MI:0915”(physical association) | 0.840 |
| ARRB1 | MAPK9 | psi-mi:“MI:0915”(physical association) | 0.840 |
| ANKRD44 | PPP6C | psi-mi:“MI:0914”(association) | 0.790 |
| ARRDC3 | WWP2 | psi-mi:“MI:0914”(association) | 0.770 |
| ARRB1 | ZBTB43 | psi-mi:“MI:0915”(physical association) | 0.740 |
| ZBTB43 | ARRB1 | psi-mi:“MI:0915”(physical association) | 0.740 |
| ARRB1 | ARRB2 | psi-mi:“MI:0914”(association) | 0.740 |
| ARRB2 | ARRB2 | psi-mi:“MI:0914”(association) | 0.670 |
| EGFR | ARRB1 | psi-mi:“MI:0915”(physical association) | 0.650 |
| ARRB1 | EGFR | psi-mi:“MI:2364”(proximity) | 0.650 |
| ARRB1 | MDM2 | psi-mi:“MI:0915”(physical association) | 0.640 |
| ZRANB2 | ARRB1 | psi-mi:“MI:0915”(physical association) | 0.640 |
| MDM2 | ARRB1 | psi-mi:“MI:0915”(physical association) | 0.640 |
| ARRB1 | GNAS | psi-mi:“MI:0915”(physical association) | 0.640 |
BioGRID (430): USP33 (Affinity Capture-Western), MAPK9 (Two-hybrid), HGS (Affinity Capture-Western), ARRB1 (Two-hybrid), ARRB1 (Two-hybrid), ZBTB43 (Two-hybrid), GNMT (Two-hybrid), ARRB1 (Reconstituted Complex), ARRB1 (Affinity Capture-Western), ARRB1 (Affinity Capture-Western), ARRB1 (Affinity Capture-Western), ARRB1 (Reconstituted Complex), MDM2 (Affinity Capture-Western), ARRB1 (Reconstituted Complex), ARRB1 (Affinity Capture-Western)
ESM2 similar proteins: A0JN27, A0PJN4, A1L167, A2VEA3, B1H1E4, F1LTR1, G1TGF1, O95164, P49407, P61201, P61202, P61203, P83868, Q07G17, Q13888, Q15185, Q2KJ29, Q2TA46, Q2TBV5, Q32NS4, Q3KNV8, Q3ZBF7, Q5BJT2, Q5F398, Q5NVM4, Q5NVP9, Q5RBN9, Q5SP67, Q5TDH0, Q5XIT1, Q6AYU1, Q6IQT4, Q6IR75, Q6NW85, Q6P1K8, Q6PER3, Q6PFJ9, Q6PWL5, Q86TJ2, Q8BTQ0
Diamond homologs: P08168, P10523, P15372, P15887, P17870, P19107, P19108, P20443, P29066, P29067, P32120, P32121, P32122, P36575, P36576, P49407, P51466, P51467, P51468, P51477, P51478, P51479, P51481, P51482, P51483, P51484, P51485, P51486, P51487, P55274, P79260, Q28281, Q4R562, Q5DRQ4, Q5RCR4, Q7YS78, Q8BWG8, Q91YI4, Q95223, Q9EQP6
SIGNOR signaling
14 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| MAPK1 | down-regulates | ARRB1 | phosphorylation |
| MAPK3 | down-regulates | ARRB1 | phosphorylation |
| SMO | up-regulates | ARRB1 | binding |
| SRC | down-regulates | ARRB1 | phosphorylation |
| ARRB1 | up-regulates | KIF3A | binding |
| Gbeta | down-regulates | ARRB1 | phosphorylation |
| ERK1/2 | down-regulates | ARRB1 | phosphorylation |
| PRKCA | “up-regulates activity” | ARRB1 | phosphorylation |
| ARRB1 | “down-regulates activity” | SLC9A5 | relocalization |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 121 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1 | 5 | 29.2× | 4e-05 |
| Fc epsilon receptor (FCERI) signaling | 8 | 24.4× | 8e-07 |
| MAP kinase activation | 5 | 17.3× | 3e-04 |
| MyD88 cascade initiated on plasma membrane | 7 | 16.0× | 3e-05 |
| Toll Like Receptor TLR6:TLR2 Cascade | 8 | 15.8× | 8e-06 |
| RHOU GTPase cycle | 5 | 15.7× | 5e-04 |
| Toll Like Receptor 2 (TLR2) Cascade | 8 | 15.6× | 8e-06 |
| MyD88:MAL(TIRAP) cascade initiated on plasma membrane | 9 | 15.4× | 2e-06 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| Fc-epsilon receptor signaling pathway | 6 | 40.0× | 9e-06 |
| positive regulation of miRNA transcription | 6 | 15.8× | 1e-03 |
| tumor necrosis factor-mediated signaling pathway | 5 | 15.0× | 5e-03 |
| JNK cascade | 6 | 14.8× | 1e-03 |
| cellular senescence | 5 | 13.4× | 5e-03 |
| positive regulation of cell growth | 6 | 10.0× | 5e-03 |
| transforming growth factor beta receptor signaling pathway | 6 | 8.7× | 7e-03 |
| positive regulation of ERK1 and ERK2 cascade | 8 | 6.2× | 5e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
60 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 43 |
| Likely benign | 3 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
3269 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 11:75266166:T:C | donor_gain | 1.0000 |
| 11:75266206:T:TA | donor_gain | 1.0000 |
| 11:75266270:CATCA:C | acceptor_gain | 1.0000 |
| 11:75266272:TCA:T | acceptor_gain | 1.0000 |
| 11:75266273:CA:C | acceptor_gain | 1.0000 |
| 11:75266273:CAC:C | acceptor_gain | 1.0000 |
| 11:75266275:C:CC | acceptor_gain | 1.0000 |
| 11:75267650:A:AC | donor_gain | 1.0000 |
| 11:75267651:C:CC | donor_gain | 1.0000 |
| 11:75271769:C:CT | acceptor_gain | 1.0000 |
| 11:75271770:A:T | acceptor_gain | 1.0000 |
| 11:75274067:T:TA | donor_gain | 1.0000 |
| 11:75274072:A:AC | donor_gain | 1.0000 |
| 11:75274073:C:CC | donor_gain | 1.0000 |
| 11:75274073:CAGG:C | donor_gain | 1.0000 |
| 11:75274101:T:TA | donor_gain | 1.0000 |
| 11:75274114:T:TA | donor_gain | 1.0000 |
| 11:75274212:C:CC | acceptor_gain | 1.0000 |
| 11:75276833:A:AC | donor_gain | 1.0000 |
| 11:75276834:C:CC | donor_gain | 1.0000 |
| 11:75276835:TTACT:T | donor_loss | 1.0000 |
| 11:75276836:TACTC:T | donor_loss | 1.0000 |
| 11:75276837:A:AC | donor_gain | 1.0000 |
| 11:75276837:A:C | donor_loss | 1.0000 |
| 11:75276838:C:CA | donor_gain | 1.0000 |
| 11:75276838:CT:C | donor_gain | 1.0000 |
| 11:75276838:CTCAG:C | donor_gain | 1.0000 |
| 11:75276841:AG:A | donor_gain | 1.0000 |
| 11:75276842:G:C | donor_gain | 1.0000 |
| 11:75276908:CGCA:C | acceptor_gain | 1.0000 |
AlphaMissense
2734 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 11:75266243:G:T | R393S | 1.000 |
| 11:75266247:A:C | F391L | 1.000 |
| 11:75266247:A:T | F391L | 1.000 |
| 11:75266248:A:C | F391C | 1.000 |
| 11:75266248:A:G | F391S | 1.000 |
| 11:75266249:A:G | F391L | 1.000 |
| 11:75268930:A:G | L351P | 1.000 |
| 11:75268942:A:G | L347P | 1.000 |
| 11:75272932:A:C | Y321D | 1.000 |
| 11:75272932:A:G | Y321H | 1.000 |
| 11:75272937:A:T | V319D | 1.000 |
| 11:75272943:A:G | I317T | 1.000 |
| 11:75272943:A:T | I317N | 1.000 |
| 11:75272946:C:T | G316E | 1.000 |
| 11:75272947:C:A | G316W | 1.000 |
| 11:75272947:C:G | G316R | 1.000 |
| 11:75272947:C:T | G316R | 1.000 |
| 11:75274079:G:C | S303R | 1.000 |
| 11:75274079:G:T | S303R | 1.000 |
| 11:75274080:C:A | S303I | 1.000 |
| 11:75274081:T:G | S303R | 1.000 |
| 11:75274083:G:A | S302F | 1.000 |
| 11:75274086:G:T | A301D | 1.000 |
| 11:75274089:A:C | L300W | 1.000 |
| 11:75274089:A:G | L300S | 1.000 |
| 11:75274099:C:G | D297H | 1.000 |
| 11:75274116:C:A | G291V | 1.000 |
| 11:75274116:C:T | G291E | 1.000 |
| 11:75274117:C:A | G291W | 1.000 |
| 11:75274117:C:G | G291R | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000016372 (11:75317176 T>C), RS1000024352 (11:75293609 C>A), RS1000049904 (11:75313620 C>G,T), RS1000071742 (11:75288346 C>A,T), RS1000106291 (11:75278535 A>G), RS1000124370 (11:75334200 T>A,C), RS1000135488 (11:75342716 C>T), RS1000160283 (11:75278269 G>A), RS1000208877 (11:75319092 C>T), RS1000218115 (11:75325263 C>T), RS1000270445 (11:75325470 T>C), RS1000280692 (11:75283951 T>C), RS1000297525 (11:75307932 C>T), RS1000334280 (11:75299253 T>C), RS1000336896 (11:75352430 G>A,T)
Disease associations
OMIM: gene MIM:107940 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
2 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001859_55 | Thiazide-induced adverse metabolic effects in hypertensive patients | 6.000000e-06 |
| GCST003675_7 | Obstructive sleep apnea trait (average respiratory event duration) | 2.000000e-07 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004530 | triglyceride measurement |
| EFO:0007817 | sleep apnea measurement |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1795088 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
4 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs140226575 | ARRB1 | 0.00 | 0 | ||
| rs78979036 | ARRB1 | 0.00 | 0 | ||
| rs58428187 | ARRB1 | 0.00 | 0 | ||
| rs78052828 | ARRB1 | 0.00 | 0 |
ChEMBL bioactivities
21 potent at pChembl≥5 of 22 total, top 21 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 9.31 | EC50 | 0.4898 | nM | CHEMBL5417669 |
| 8.03 | EC50 | 9.333 | nM | CHEMBL5414487 |
| 7.69 | EC50 | 20.42 | nM | UROTENSIN-II |
| 7.34 | Kd | 45.21 | nM | CHEMBL5653589 |
| 7.34 | ED50 | 45.21 | nM | CHEMBL5653589 |
| 7.22 | EC50 | 60 | nM | CHEMBL5739600 |
| 7.02 | EC50 | 95.5 | nM | CHEMBL5421473 |
| 6.93 | EC50 | 117.5 | nM | CHEMBL5401911 |
| 6.76 | EC50 | 173.8 | nM | CHEMBL5421352 |
| 6.57 | EC50 | 270 | nM | CHEMBL5905642 |
| 6.51 | EC50 | 310 | nM | CHEMBL5665374 |
| 6.08 | EC50 | 830 | nM | CHEMBL5977166 |
| 6.07 | EC50 | 851.1 | nM | CHEMBL5422077 |
| 6.03 | EC50 | 933.2 | nM | CHEMBL5416714 |
| 5.92 | EC50 | 1202 | nM | CHEMBL5396036 |
| 5.91 | EC50 | 1230 | nM | CHEMBL5423896 |
| 5.75 | EC50 | 1778 | nM | CHEMBL5406651 |
| 5.59 | EC50 | 2560 | nM | CHEMBL5895874 |
| 5.51 | EC50 | 3100 | nM | CHEMBL5946750 |
| 5.50 | EC50 | 3170 | nM | CHEMBL6052956 |
| 5.43 | EC50 | 3670 | nM | CHEMBL5806020 |
PubChem BioAssay actives
12 with measured affinity, of 23 total; 12 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 3-(4-aminobutyl)-5-[(E)-2-(4-methoxyphenyl)ethenyl]-2-oxo-N-(2-phenoxyethyl)-1-[(4-phenylphenyl)methyl]-1,3,4-benzotriazepine-8-carboxamide;hydrochloride | 2019496: Agonist activity at RLucII/GFP10-tagged beta-arrestin-1 (unknown origin) recruitment expressed in HEK293 cells co-expressing human UT assessed as beta-arrestin recruitment by BRET assay | ec50 | 0.0005 | uM |
| 3-(4-aminobutyl)-N-benzyl-5-[(E)-2-(4-methoxyphenyl)ethenyl]-2-oxo-1-[(4-phenylphenyl)methyl]-1,3,4-benzotriazepine-8-carboxamide;hydrochloride | 2019496: Agonist activity at RLucII/GFP10-tagged beta-arrestin-1 (unknown origin) recruitment expressed in HEK293 cells co-expressing human UT assessed as beta-arrestin recruitment by BRET assay | ec50 | 0.0093 | uM |
| (4S)-4-amino-5-[[(2S,3R)-1-[(2S)-2-[[(2S)-1-[[(4R,7S,10S,13S,16S,19R)-10-(4-aminobutyl)-16-benzyl-4-[[(1S)-1-carboxy-2-methylpropyl]carbamoyl]-7-[(4-hydroxyphenyl)methyl]-13-(1H-indol-3-ylmethyl)-6,9,12,15,18-pentaoxo-1,2-dithia-5,8,11,14,17-pentazacycloicos-19-yl]amino]-3-carboxy-1-oxopropan-2-yl]carbamoyl]pyrrolidin-1-yl]-3-hydroxy-1-oxobutan-2-yl]amino]-5-oxopentanoic acid | 2019496: Agonist activity at RLucII/GFP10-tagged beta-arrestin-1 (unknown origin) recruitment expressed in HEK293 cells co-expressing human UT assessed as beta-arrestin recruitment by BRET assay | ec50 | 0.0204 | uM |
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2147895: Binding affinity to human ARRB1 incubated for 45 mins by Kinobead based pull down assay | kd | 0.0452 | uM |
| 3-(4-aminobutyl)-N-(2,2-diphenylethyl)-5-[(E)-2-(4-hydroxyphenyl)ethenyl]-2-oxo-1-[(4-phenylphenyl)methyl]-1,3,4-benzotriazepine-8-carboxamide;hydrochloride | 2019496: Agonist activity at RLucII/GFP10-tagged beta-arrestin-1 (unknown origin) recruitment expressed in HEK293 cells co-expressing human UT assessed as beta-arrestin recruitment by BRET assay | ec50 | 0.0955 | uM |
| 3-(4-aminobutyl)-N-benzyl-5-[(E)-2-(4-hydroxyphenyl)ethenyl]-N-methyl-2-oxo-1-[(4-phenylphenyl)methyl]-1,3,4-benzotriazepine-8-carboxamide;hydrochloride | 2019496: Agonist activity at RLucII/GFP10-tagged beta-arrestin-1 (unknown origin) recruitment expressed in HEK293 cells co-expressing human UT assessed as beta-arrestin recruitment by BRET assay | ec50 | 0.1175 | uM |
| 3-(4-aminobutyl)-5-[2-(4-hydroxyphenyl)ethyl]-2-oxo-1-[(4-phenylphenyl)methyl]-N-(3-phenylpropyl)-1,3,4-benzotriazepine-8-carboxamide;hydrochloride | 2019496: Agonist activity at RLucII/GFP10-tagged beta-arrestin-1 (unknown origin) recruitment expressed in HEK293 cells co-expressing human UT assessed as beta-arrestin recruitment by BRET assay | ec50 | 0.1738 | uM |
| 3-(4-aminobutyl)-5-[(E)-2-(4-hydroxyphenyl)ethenyl]-2-oxo-1-[(4-phenylphenyl)methyl]-N-(3-phenylpropyl)-1,3,4-benzotriazepine-8-carboxamide;hydrochloride | 2019496: Agonist activity at RLucII/GFP10-tagged beta-arrestin-1 (unknown origin) recruitment expressed in HEK293 cells co-expressing human UT assessed as beta-arrestin recruitment by BRET assay | ec50 | 0.8511 | uM |
| 3-(4-aminobutyl)-N-benzyl-5-[2-(4-hydroxyphenyl)ethyl]-N-methyl-2-oxo-1-[(4-phenylphenyl)methyl]-1,3,4-benzotriazepine-8-carboxamide;hydrochloride | 2019496: Agonist activity at RLucII/GFP10-tagged beta-arrestin-1 (unknown origin) recruitment expressed in HEK293 cells co-expressing human UT assessed as beta-arrestin recruitment by BRET assay | ec50 | 0.9333 | uM |
| 3-(4-aminobutyl)-5-[(E)-2-(4-methoxyphenyl)ethenyl]-2-oxo-1-[(4-phenylphenyl)methyl]-N-(3-phenylpropyl)-1,3,4-benzotriazepine-8-carboxamide;hydrochloride | 2019496: Agonist activity at RLucII/GFP10-tagged beta-arrestin-1 (unknown origin) recruitment expressed in HEK293 cells co-expressing human UT assessed as beta-arrestin recruitment by BRET assay | ec50 | 1.2023 | uM |
| 3-(4-aminobutyl)-N-benzyl-5-[(E)-2-(4-hydroxyphenyl)ethenyl]-2-oxo-1-[(4-phenylphenyl)methyl]-1,3,4-benzotriazepine-8-carboxamide;hydrochloride | 2019496: Agonist activity at RLucII/GFP10-tagged beta-arrestin-1 (unknown origin) recruitment expressed in HEK293 cells co-expressing human UT assessed as beta-arrestin recruitment by BRET assay | ec50 | 1.2303 | uM |
| 3-(4-aminobutyl)-5-[2-(4-hydroxyphenyl)ethyl]-2-oxo-N-(2-phenoxyethyl)-1-[(4-phenylphenyl)methyl]-1,3,4-benzotriazepine-8-carboxamide;hydrochloride | 2019496: Agonist activity at RLucII/GFP10-tagged beta-arrestin-1 (unknown origin) recruitment expressed in HEK293 cells co-expressing human UT assessed as beta-arrestin recruitment by BRET assay | ec50 | 1.7783 | uM |
CTD chemical–gene interactions
86 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects cotreatment, increases expression | 6 |
| bisphenol A | decreases methylation, increases expression | 3 |
| trichostatin A | affects cotreatment, increases expression | 3 |
| Benzo(a)pyrene | affects methylation, decreases expression, increases expression | 3 |
| sodium arsenite | decreases expression, increases expression | 2 |
| mercuric bromide | increases expression, affects cotreatment | 2 |
| 3-(2-hydroxy-4-(1,1-dimethylheptyl)phenyl)-4-(3-hydroxypropyl)cyclohexanol | affects localization, affects reaction, increases reaction, increases phosphorylation | 2 |
| entinostat | increases expression, affects cotreatment | 2 |
| belinostat | increases expression, affects cotreatment | 2 |
| (+)-JQ1 compound | decreases expression | 2 |
| Carvedilol | increases phosphorylation, increases reaction, increases expression, affects binding, decreases reaction (+1 more) | 2 |
| Panobinostat | increases expression, affects cotreatment | 2 |
| Air Pollutants | decreases expression, increases abundance | 2 |
| Alprenolol | increases expression, affects binding, increases reaction, increases phosphorylation, affects cotreatment | 2 |
| Cisplatin | affects expression, affects cotreatment, increases expression | 2 |
| Copper | affects binding, decreases expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, increases expression | 2 |
| Tetrachlorodibenzodioxin | decreases expression | 2 |
| Particulate Matter | decreases expression, increases abundance, affects localization, increases reaction, increases expression (+1 more) | 2 |
| aristolochic acid I | increases expression | 1 |
| GSK-J4 | decreases expression | 1 |
| bisphenol F | increases expression | 1 |
| 2,4,6-tribromophenol | increases expression | 1 |
| methyleugenol | increases expression | 1 |
| propionaldehyde | decreases expression | 1 |
| decabromobiphenyl ether | decreases expression | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | decreases expression | 1 |
| butyraldehyde | decreases expression | 1 |
| ochratoxin A | affects cotreatment, decreases expression | 1 |
| benzo(e)pyrene | increases methylation | 1 |
ChEMBL screening assays
5 unique, capped per target: 4 binding, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1794493 | Functional | PUBCHEM_BIOASSAY: Dose Response Assay for Inhibitors of the beta-Arrestin-Adaptor Protein 2 Interaction for Cherry Pick 1. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID504490, AID504493, AID504541] | PubChem BioAssay data set |
| CHEMBL5373404 | Binding | Agonist activity at RLucII/GFP10-tagged beta-arrestin-1 (unknown origin) recruitment expressed in HEK293 cells co-expressing human UT assessed as beta-arrestin recruitment by BRET assay | Urotensin II Receptor Modulation with 1,3,4-Benzotriazepin-2-one Tetrapeptide Mimics. — J Med Chem |
Cellosaurus cell lines
23 cell lines: 13 cancer cell line, 7 spontaneously immortalized cell line, 3 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B9DM | Abcam A-549 ARRB1 KO | Cancer cell line | Male |
| CVCL_D7KG | Ubigene A-549 ARRB1 KO | Cancer cell line | Male |
| CVCL_D8HH | Ubigene HCT 116 ARRB1 KO | Cancer cell line | Male |
| CVCL_D8ZG | Ubigene HEK293 ARRB1 KO | Transformed cell line | Female |
| CVCL_D9XU | Ubigene HeLa ARRB1 KO | Cancer cell line | Female |
| CVCL_KW33 | PathHunter CHO-K1 AGTRL1 beta-arrestin-1 | Spontaneously immortalized cell line | Female |
| CVCL_KW42 | PathHunter CHO-K1 beta-arrestin1-EA Parental | Spontaneously immortalized cell line | Female |
| CVCL_KX12 | PathHunter CHO-K1 GCGR beta-arrestin-1 | Spontaneously immortalized cell line | Female |
| CVCL_KX16 | PathHunter CHO-K1 GLP1R beta-arrestin-1 | Spontaneously immortalized cell line | Female |
| CVCL_KX27 | PathHunter CHO-K1 GPR120S beta-arrestin-1 | Spontaneously immortalized cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): obstructive sleep apnea syndrome