ARSA
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Also known as ASA
Summary
ARSA (arylsulfatase A, HGNC:713) is a protein-coding gene on chromosome 22q13.33, encoding Arylsulfatase A (P15289). Hydrolyzes cerebroside sulfate.
The protein encoded by this gene hydrolyzes cerebroside sulfate to cerebroside and sulfate. Defects in this gene lead to metachromatic leucodystrophy (MLD), a progressive demyelination disease which results in a variety of neurological symptoms and ultimately death. Alternatively spliced transcript variants have been described for this gene.
Source: NCBI Gene 410 — RefSeq curated summary.
At a glance
- Gene–disease (curated): metachromatic leukodystrophy (Definitive, ClinGen) — +1 more curated relationship
- GWAS associations: 6
- Clinical variants (ClinVar): 1,329 total — 164 pathogenic, 134 likely-pathogenic
- Phenotypes (HPO): 66
- Druggable target: yes
- MANE Select transcript:
NM_000487
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:713 |
| Approved symbol | ARSA |
| Name | arylsulfatase A |
| Location | 22q13.33 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | ASA |
| Ensembl gene | ENSG00000100299 |
| Ensembl biotype | protein_coding |
| OMIM | 607574 |
| Entrez | 410 |
Gene structure
Transcript identifiers
Ensembl transcripts: 17 — 14 protein_coding, 1 retained_intron, 1 nonsense_mediated_decay, 1 protein_coding_CDS_not_defined
ENST00000216124, ENST00000356098, ENST00000395619, ENST00000395621, ENST00000453344, ENST00000551731, ENST00000608497, ENST00000610191, ENST00000861936, ENST00000861937, ENST00000861938, ENST00000861939, ENST00000861940, ENST00000861941, ENST00000861942, ENST00000861943, ENST00000963449
RefSeq mRNA: 6 — MANE Select: NM_000487
NM_000487, NM_001085425, NM_001085426, NM_001085427, NM_001085428, NM_001362782
CCDS: CCDS14100, CCDS46736
Canonical transcript exons
ENST00000216124 — 8 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000657812 | 50625579 | 50625681 |
| ENSE00000657814 | 50625936 | 50626063 |
| ENSE00000657816 | 50626154 | 50626278 |
| ENSE00000657818 | 50626591 | 50626760 |
| ENSE00000657820 | 50626834 | 50627052 |
| ENSE00000878959 | 50627556 | 50628152 |
| ENSE00003595694 | 50627166 | 50627406 |
| ENSE00003845710 | 50622754 | 50625464 |
Expression profiles
Bgee: expression breadth ubiquitous, 177 present calls, max score 95.70.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 17.3543 / max 118.4096, expressed in 1803 samples.
FANTOM5 promoters (1 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 194802 | 17.3543 | 1803 |
Top tissues by expression
283 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right uterine tube | UBERON:0001302 | 95.70 | gold quality |
| right testis | UBERON:0004534 | 95.49 | gold quality |
| granulocyte | CL:0000094 | 95.43 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 95.35 | gold quality |
| left testis | UBERON:0004533 | 95.28 | gold quality |
| apex of heart | UBERON:0002098 | 93.68 | gold quality |
| adenohypophysis | UBERON:0002196 | 93.34 | gold quality |
| minor salivary gland | UBERON:0001830 | 93.27 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 93.20 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 93.03 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 92.88 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 92.79 | gold quality |
| transverse colon | UBERON:0001157 | 92.74 | gold quality |
| right lobe of liver | UBERON:0001114 | 92.70 | gold quality |
| body of pancreas | UBERON:0001150 | 92.56 | gold quality |
| body of stomach | UBERON:0001161 | 92.22 | gold quality |
| left coronary artery | UBERON:0001626 | 92.22 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 92.02 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 91.91 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 91.90 | gold quality |
| ascending aorta | UBERON:0001496 | 91.86 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 91.86 | gold quality |
| thoracic aorta | UBERON:0001515 | 91.84 | gold quality |
| right adrenal gland | UBERON:0001233 | 91.75 | gold quality |
| spleen | UBERON:0002106 | 91.69 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 91.69 | gold quality |
| right coronary artery | UBERON:0001625 | 91.68 | gold quality |
| cerebellar cortex | UBERON:0002129 | 91.62 | gold quality |
| right atrium auricular region | UBERON:0006631 | 91.58 | gold quality |
| saliva-secreting gland | UBERON:0001044 | 91.46 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-CURD-122 | yes | 39.47 |
| E-ANND-3 | yes | 14.61 |
| E-MTAB-10553 | yes | 8.78 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
51 targeting ARSA, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-4531 | 99.99 | 69.70 | 3181 |
| HSA-MIR-150-5P | 99.99 | 66.69 | 1976 |
| HSA-MIR-373-5P | 99.98 | 75.36 | 4753 |
| HSA-MIR-616-5P | 99.98 | 75.58 | 4775 |
| HSA-MIR-221-5P | 99.86 | 65.45 | 1052 |
| HSA-MIR-8073 | 99.86 | 65.21 | 1118 |
| HSA-MIR-6745 | 99.74 | 65.33 | 1321 |
| HSA-MIR-4306 | 99.72 | 70.50 | 3630 |
| HSA-MIR-4524A-3P | 99.72 | 66.85 | 2406 |
| HSA-MIR-149-3P | 99.72 | 68.22 | 3963 |
| HSA-MIR-6715B-5P | 99.64 | 69.63 | 1420 |
| HSA-MIR-1827 | 99.63 | 68.57 | 3265 |
| HSA-MIR-4269 | 99.55 | 69.89 | 1373 |
| HSA-MIR-363-5P | 99.46 | 64.51 | 1015 |
| HSA-MIR-1324 | 99.46 | 66.57 | 1302 |
| HSA-MIR-3182 | 99.40 | 68.15 | 2454 |
| HSA-MIR-103A-1-5P | 99.39 | 67.78 | 1545 |
| HSA-MIR-103A-2-5P | 99.39 | 67.72 | 1577 |
| HSA-MIR-940 | 99.37 | 66.14 | 2064 |
| HSA-MIR-185-5P | 99.35 | 68.60 | 2497 |
| HSA-MIR-4644 | 99.35 | 69.12 | 2514 |
| HSA-MIR-6808-5P | 99.31 | 66.23 | 2150 |
| HSA-MIR-6893-5P | 99.31 | 66.25 | 2119 |
| HSA-MIR-504-3P | 99.30 | 67.18 | 1745 |
| HSA-MIR-485-5P | 99.10 | 64.78 | 1889 |
| HSA-MIR-6884-5P | 99.10 | 64.50 | 1987 |
| HSA-MIR-4478 | 99.07 | 65.16 | 2320 |
| HSA-MIR-670-3P | 99.03 | 68.88 | 2404 |
Literature-anchored findings (GeneRIF, showing 40)
- Multiple alleles in a subject unaffected with metachromatic leucodystrophy (PMID:11333871)
- contribution of mutations to enzyme activity reduction and metachromatic leukodystrophy severity (PMID:11941485)
- analysis of arylsulfatase A mutations demonstrates a lack of association with Alzheimer-type dementia or Down syndrome (PMID:12459318)
- the reduced lysosomal half-life of some mutated forms of ARSA is related to deficient octamerization (PMID:12788103)
- Structures of human arylsulfatase A crystals soaked in solutions containing 4-methylumbelliferyl phosphate and O-phospho-DL-tyrosine have been determined at 2.7- and 3.2-A resolution, respectively. Phosphate and calcium binding sites are identified. (PMID:12888274)
- Metachromatic leukodystrophy Molecular analysis revealed compound heterozygosity for two novel missense mutations affecting conserved residues in the arylsulphatase A (ASA) sulphatase and carboxyterminal domains, with 89% loss of enzymatic activity. (PMID:15026521)
- missense mutation in which actual pathogenic effect was splicing-related by disrupting a potential exonic splicing enhancer (ESE) and causing a complete exon 7 skipping (PMID:15375602)
- Genetic analysis revealed homozygosity for a novel mutation in exon 3 of ARSA (F219V). (PMID:15710861)
- Enzyme replacement therapy, using ARSA, improves nervous system pathology and function in a mouse model for metachromatic leukodystrophy. (PMID:15772092)
- Homozygote for mutation of the ARSA gene presents with a late-infantile form of metachromatic leukodystrophy (PMID:16110195)
- Adeno-associated virus serotype 5-mediated brain delivery of ARSA is a potentially efficacious therapeutic strategy for metachromatic leukodystrophy patients, especially for those with rapidly progressive form of the disease. (PMID:16311251)
- Novel mutations in the arylsulfatase A gene in eight Italian families with metachromatic leukodystrophy (PMID:16678723)
- decidual levels of arylsulphatase A showed very low values at 41 weeks, which reduced to a half at 42 weeks of gestation (PMID:17329011)
- Six DNA variants of the arylsulfatase A gene were identified: two novel frameshift mutations (c.179_180dupCA and c.1338dupC), one known nonsense mutation (p.W318X), and three known missense mutations (p.R84Q, p.G99V, and p.R288C) (PMID:17560502)
- Induction of tolerance to human ARSA in a mouse model of metachromatic leukodystrophy is reported. (PMID:17660863)
- Safety of ARSA overexpression for gene therapy of metachromatic leukodystrophy was evaluated. (PMID:17845130)
- R95Q, G144R, H393P, & C521Y cause large structural changes, & are associated with the severe phenotype of mucopolysaccharidosis VI. G137V & Y210C are thought to cause small structural changes in a limited region resulting in the attenuated phenotype. (PMID:18248830)
- 11 novel ARSA alleles in Italian patients with metachromatic leukodystrophy are described. (PMID:18693274)
- DNA sequencing revealed two novel disease-causing missense mutations in the arylsulfatase gene in patients with metachromatic leukodystrophy (PMID:18768108)
- the novel Metachromatic leukodystrophy- causing mutations in the exons 2, 5 and even in 8 of the ARSA gene described here can be classified as severe type 0, leading in homozygosity to the late infantile form Metachromatic leukodystrophy (PMID:19021637)
- We report on two patients with mental retardation, dysmorphic features and low catalytic activity of arylsulfatase A which is because of were explained, in each patients, by a deletion of 22q13 and, thereby, of one allele of ARSA. (PMID:19054018)
- Saposin B(Sap B) is not a limiting factor of the coupled Sap B-ASA reaction in mouse kidney cells even if sulfatide has accumulated to unphysiologically high levels (PMID:19224915)
- characterized eight newly identified ARSA mutations, through lentiviral vector-based expression studies on cell lines and ARSA defective murine fibroblasts. The residual activity associated with the new mutant allele correlates well with the phenotype (PMID:19606494)
- ARSA mutations in the Indian population were characterized. 4 new variant & 5 pseudodeficiency alleles were found. Protein modeling showed loss of interactions leading to conformation change. (PMID:21167507)
- case report of missense mutations p.G99D and p.T409I associated with adult-type metachromatic leukodystrophy (PMID:21265945)
- cationization of ASA and an increase of the mannose 6-phosphate content of the enzyme may promote blood-to-brain transfer of ASA, thus leading to an improved therapeutic efficacy of enzyme replacement therapy behind the BBB. (PMID:21454621)
- The presence of two most common mutations associated with Arylsulfatase A pseudodeficiency was analyzed in 56 patients with diagnosis of relapsing-remitting multiple sclerosis, by polymerase chain reaction restriction fragment length polymorphism method. (PMID:21648305)
- The purpose was to estimate the birth prevalence of Metachromatic leukodystrophy in Poland by determining population frequency of the common pathogenic ARSA gene mutations and to compare this estimate with epidemiological data. (PMID:21695197)
- This is the first report that human adipocytes express functional DAR and ARSA, suggesting a regulatory role for peripheral DA in adipose functions. (PMID:21966540)
- Studied brain uptake in the rhesus monkey of a fusion protein of arylsulfatase a and a monoclonal antibody against the human insulin receptor. (PMID:23192358)
- The interaction between SPAM1, ARSA and HSPA2 in a multimeric complex mediating sperm-egg interaction. (PMID:23209833)
- HSPA2 regulates the expression of sperm surface receptors involved in human sperm-oocyte recognition, such as arylsulfatase A and SPAM1. (PMID:23247813)
- Arylsulphatase A activity in human endometrial polyps inversely correlates with aging (PMID:23689179)
- Sixteen novel mutations that cause metachromatic leukodystrophy have been identified in the arylsulfatase A gene. (PMID:24001781)
- We report three families with Arylsulphatase A partial deficit in which we can find a high recurrence of parkinsonism among the siblings. (PMID:24989669)
- Data indicate a significant correlation between the mutation of c.622delC(p.His208Metfs*46) in the arylsulfatase A (ARSA) gene and the phenotype OF metachromatic leukodystrophy. (PMID:25297594)
- an extensive review of all the ARSA-causative variants published in the literature to date, accounting for a total of 200 ARSA allele types (review) (PMID:26462614)
- First report of arylsulfatase A pseudodeficiency (ASA-PD) allele and haplotype frequencies in a North African population, reveals relatively high prevalence of the ASA-PD allele in the Tunisian population with an intermediate genetic structure between Africans, Middle-eastern and Europeans most probably linked to the particular geographic location of Tunisia and the several population incursions throughout its history (PMID:26577183)
- siblings exhibited compound heterozygous variants {[c.302G>T]+[c.1344dupC]} in the ARSA gene, and both of the variants have been reported as disease-causing mutations previouslyfa (PMID:27374302)
- The novel p.L113P mutation in a Pakistani family with late infantile MLD has a pathogenic and destructive effect on the protein structure and function of ARSA. (PMID:28799099)
Cross-species orthologs
11 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | arsa | ENSDARG00000042270 |
| mus_musculus | Arsa | ENSMUSG00000022620 |
| rattus_norvegicus | Arsa | ENSRNOG00000012953 |
| drosophila_melanogaster | CG18278 | FBGN0033836 |
| drosophila_melanogaster | CG7408 | FBGN0036765 |
| drosophila_melanogaster | CG7402 | FBGN0036768 |
| drosophila_melanogaster | Sulf1 | FBGN0040271 |
| drosophila_melanogaster | CG32191 | FBGN0052191 |
| drosophila_melanogaster | CG30059 | FBGN0260475 |
| caenorhabditis_elegans | WBGENE00006308 | |
| caenorhabditis_elegans | WBGENE00006309 |
Paralogs (16): ARSD (ENSG00000006756), IDS (ENSG00000010404), ARSF (ENSG00000062096), STS (ENSG00000101846), ARSB (ENSG00000113273), GNS (ENSG00000135677), SULF1 (ENSG00000137573), GALNS (ENSG00000141012), ARSG (ENSG00000141337), ARSL (ENSG00000157399), ARSK (ENSG00000164291), ARSJ (ENSG00000180801), SGSH (ENSG00000181523), ARSI (ENSG00000183876), SULF2 (ENSG00000196562), ARSH (ENSG00000205667)
Protein
Protein identifiers
Arylsulfatase A — P15289 (reviewed: P15289)
Alternative names: Cerebroside-sulfatase
All UniProt accessions (3): P15289, A0A0C4DFZ2, V9GYR0
UniProt curated annotations — full annotation on UniProt →
Function. Hydrolyzes cerebroside sulfate.
Subunit / interactions. Homodimer at neutral pH and homooctamer at acidic pH. Exists both as a single chain of 58 kDa (component A) or as a chain of 50 kDa (component B) linked by disulfide bond(s) to a 7 kDa chain (component C). Interacts with SUMF1.
Subcellular location. Endoplasmic reticulum. Lysosome.
Post-translational modifications. The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity. This post-translational modification is severely defective in multiple sulfatase deficiency (MSD).
Disease relevance. Metachromatic leukodystrophy (MLD) [MIM:250100] An autosomal recessive disease caused by abnormal intralysosomal accumulation of cerebroside-3-sulfate in central and peripheral nervous systems, as well as other organs. MLD is clinically characterized by leukodystrophy, progressive demyelination and a variety of neurological symptoms, including gait disturbances, ataxias, optical atrophy, dementia, seizures, and spastic tetraparesis. Decreased arylsulfatase A activity is detected in urine, leukocytes, and fibroblasts of affected individuals. Several forms of the disease can be distinguished according to the age at onset and disease severity: late infantile, juvenile and adult forms, partial cerebroside sulfate deficiency, and pseudoarylsulfatase A deficiency. Individuals with pseudoarylsulfatase A deficiency have low arylsulfatase A activity but lack neurological manifestations and are apparently healthy. The disease is caused by variants affecting the gene represented in this entry. Multiple sulfatase deficiency (MSD) [MIM:272200] A clinically and biochemically heterogeneous disorder caused by the simultaneous impairment of all sulfatases, due to defective post-translational modification and activation. It combines features of individual sulfatase deficiencies such as metachromatic leukodystrophy, mucopolysaccharidosis, chondrodysplasia punctata, hydrocephalus, ichthyosis, neurologic deterioration and developmental delay. The protein represented in this entry is involved in disease pathogenesis. Arylsulfatase A activity is impaired in multiple sulfatase deficiency due to mutations in SUMF1. SUMF1 mutations result in defective post-translational modification of ARSA at residue Cys-69 that is not converted to 3-oxoalanine.
Activity regulation. Inhibited by phosphate. The phosphate forms a covalent bond with the active site 3-oxoalanine.
Cofactor. Binds 1 Ca(2+) ion per subunit.
Miscellaneous. The metal cofactor was first identified as magnesium ion, based on the structure of the recombinant protein, but when purified from human placenta, the protein contains 1 calcium ion per subunit.
Similarity. Belongs to the sulfatase family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P15289-1 | 1 | yes |
| P15289-2 | 2 |
RefSeq proteins (6): NP_000478, NP_001078894, NP_001078895, NP_001078896, NP_001078897, NP_001349711 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000917 | Sulfatase_N | Domain |
| IPR017850 | Alkaline_phosphatase_core_sf | Homologous_superfamily |
| IPR024607 | Sulfatase_CS | Conserved_site |
| IPR050738 | Sulfatase | Family |
Pfam: PF00884, PF14707
Catalyzed reactions (Rhea), 1 shown:
- an N-acyl-1-beta-D-(3-O-sulfo)-galactosyl-sphing-4-enine + H2O = a beta-D-galactosyl-(1<->1’)-N-acylsphing-4-enine + sulfate + H(+) (RHEA:21300)
UniProt features (187 total): sequence variant 108, strand 21, helix 21, binding site 9, turn 7, disulfide bond 6, chain 3, mutagenesis site 3, glycosylation site 3, active site 2, signal peptide 1, sequence conflict 1, modified residue 1, splice variant 1
Structure
Experimental structures (PDB)
10 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 2AIJ | X-RAY DIFFRACTION | 1.55 |
| 2HI8 | X-RAY DIFFRACTION | 1.64 |
| 2AIK | X-RAY DIFFRACTION | 1.73 |
| 1AUK | X-RAY DIFFRACTION | 2.1 |
| 1E2S | X-RAY DIFFRACTION | 2.35 |
| 1E1Z | X-RAY DIFFRACTION | 2.4 |
| 1E33 | X-RAY DIFFRACTION | 2.5 |
| 1E3C | X-RAY DIFFRACTION | 2.65 |
| 1N2K | X-RAY DIFFRACTION | 2.75 |
| 1N2L | X-RAY DIFFRACTION | 3.2 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P15289-F1 | 96.43 | 0.95 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (2): 69 (nucleophile); 125
Ligand- & substrate-binding residues (9): 150; 229; 281; 282; 302; 29; 30; 69 (via 3-oxoalanine); 123
Post-translational modifications (1): 69
Disulfide bonds (6): 156–172, 161–168, 300–414, 488–500, 489–502, 493–499
Glycosylation sites (3): 158, 184, 350
Mutagenesis-validated functional residues (3):
| Position | Phenotype |
|---|---|
| 69–70 | strongly reduces formation of 3-oxoalanine (also known as c-formylglycine, fgly). |
| 69 | abolishes enzyme activity. |
| 69 | abolishes formation of 3-oxoalanine (also known as c-formylglycine, fgly). strongly decreases enzyme activity. |
Function
Pathways and Gene Ontology
Reactome pathways
12 pathways
| ID | Pathway |
|---|---|
| R-HSA-1663150 | The activation of arylsulfatases |
| R-HSA-6798695 | Neutrophil degranulation |
| R-HSA-9840310 | Glycosphingolipid catabolism |
| R-HSA-1430728 | Metabolism |
| R-HSA-163841 | Gamma carboxylation, hypusinylation, hydroxylation, and arylsulfatase activation |
| R-HSA-1660662 | Glycosphingolipid metabolism |
| R-HSA-168249 | Innate Immune System |
| R-HSA-168256 | Immune System |
| R-HSA-392499 | Metabolism of proteins |
| R-HSA-428157 | Sphingolipid metabolism |
| R-HSA-556833 | Metabolism of lipids |
| R-HSA-597592 | Post-translational protein modification |
MSigDB gene sets: 250 (showing top):
REACTOME_INNATE_IMMUNE_SYSTEM, GRUETZMANN_PANCREATIC_CANCER_DN, GOCC_SECRETORY_GRANULE, KEGG_LYSOSOME, HOSHIDA_LIVER_CANCER_SUBCLASS_S3, MODULE_256, GOBP_LIPID_METABOLIC_PROCESS, SANSOM_APC_TARGETS_DN, GUO_HEX_TARGETS_UP, MODULE_408, IGLESIAS_E2F_TARGETS_UP, REACTOME_SPHINGOLIPID_METABOLISM, KEGG_SPHINGOLIPID_METABOLISM, GOCC_LYSOSOMAL_LUMEN, GOCC_SECRETORY_VESICLE
GO Biological Process (8): lipid metabolic process (GO:0006629), autophagy (GO:0006914), binding of sperm to zona pellucida (GO:0007339), response to nutrient (GO:0007584), response to pH (GO:0009268), response to estrogen (GO:0043627), response to ethanol (GO:0045471), response to methylmercury (GO:0051597)
GO Molecular Function (7): arylsulfatase activity (GO:0004065), cerebroside-sulfatase activity (GO:0004098), calcium ion binding (GO:0005509), sulfuric ester hydrolase activity (GO:0008484), protein binding (GO:0005515), hydrolase activity (GO:0016787), metal ion binding (GO:0046872)
GO Cellular Component (13): extracellular region (GO:0005576), lysosome (GO:0005764), endoplasmic reticulum lumen (GO:0005788), azurophil granule lumen (GO:0035578), lysosomal lumen (GO:0043202), extracellular exosome (GO:0070062), acrosomal vesicle (GO:0001669), obsolete extracellular space (GO:0005615), endosome (GO:0005768), endoplasmic reticulum (GO:0005783), plasma membrane (GO:0005886), membrane (GO:0016020), extrinsic component of external side of plasma membrane (GO:0031232)
Reactome top-level categories
Rollup of top-9 pathways:
| Category | Pathways |
|---|---|
| Gamma carboxylation, hypusinylation, hydroxylation, and arylsulfatase activation | 1 |
| Innate Immune System | 1 |
| Glycosphingolipid metabolism | 1 |
| Post-translational protein modification | 1 |
| Sphingolipid metabolism | 1 |
| Immune System | 1 |
| Metabolism of lipids | 1 |
| Metabolism | 1 |
| Metabolism of proteins | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| response to chemical | 2 |
| sulfuric ester hydrolase activity | 2 |
| cellular anatomical structure | 2 |
| vacuolar lumen | 2 |
| endomembrane system | 2 |
| primary metabolic process | 1 |
| catabolic process | 1 |
| transmembrane transport | 1 |
| process utilizing autophagic mechanism | 1 |
| sperm-egg recognition | 1 |
| response to nutrient levels | 1 |
| response to abiotic stimulus | 1 |
| response to hormone | 1 |
| response to alcohol | 1 |
| metal ion binding | 1 |
| hydrolase activity, acting on ester bonds | 1 |
| binding | 1 |
| catalytic activity | 1 |
| cation binding | 1 |
| lytic vacuole | 1 |
| endoplasmic reticulum | 1 |
| intracellular organelle lumen | 1 |
| secretory granule lumen | 1 |
| azurophil granule | 1 |
| lysosome | 1 |
| extracellular vesicle | 1 |
| secretory granule | 1 |
| cytoplasmic vesicle | 1 |
| cytoplasm | 1 |
| intracellular membrane-bounded organelle | 1 |
| membrane | 1 |
| cell periphery | 1 |
| external side of plasma membrane | 1 |
| extrinsic component of plasma membrane | 1 |
Protein interactions and networks
STRING
1166 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ARSA | PSAP | P07292 | 911 |
| ARSA | GALC | P54803 | 859 |
| ARSA | GUSB | P08236 | 838 |
| ARSA | ASAH1 | Q13510 | 782 |
| ARSA | HPCA | P32076 | 781 |
| ARSA | SUMF1 | Q8NBK3 | 781 |
| ARSA | CYB5R3 | P00387 | 774 |
| ARSA | GLA | P06280 | 754 |
| ARSA | IDUA | P35475 | 690 |
| ARSA | GLB1 | P16278 | 689 |
| ARSA | GBA1 | P04062 | 662 |
| ARSA | SMPD1 | P17405 | 643 |
| ARSA | HSPA2 | P54652 | 626 |
| ARSA | SPAM1 | P38567 | 603 |
| ARSA | GAL3ST1 | Q99999 | 581 |
IntAct
91 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| ARSA | TRIP13 | psi-mi:“MI:0915”(physical association) | 0.900 |
| TRIP13 | ARSA | psi-mi:“MI:0915”(physical association) | 0.900 |
| KLK5 | DENND11 | psi-mi:“MI:0914”(association) | 0.640 |
| SCGB1D1 | MANBA | psi-mi:“MI:0914”(association) | 0.640 |
| C22orf39 | ARSA | psi-mi:“MI:0915”(physical association) | 0.560 |
| ENKD1 | ARSA | psi-mi:“MI:0915”(physical association) | 0.560 |
| ARSA | C22orf39 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ARSA | PKN1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ARSA | ENKD1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CCDC22 | ARSA | psi-mi:“MI:0915”(physical association) | 0.560 |
| ARSA | CAMK2B | psi-mi:“MI:0915”(physical association) | 0.560 |
| PROP1 | ARSA | psi-mi:“MI:0915”(physical association) | 0.560 |
| ARSA | EID2B | psi-mi:“MI:0915”(physical association) | 0.560 |
| ARSA | POU1F1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ARSA | ANXA11 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ARSA | FOXI1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| VENTX | ARSA | psi-mi:“MI:0915”(physical association) | 0.560 |
| ARSA | RHOXF2 | psi-mi:“MI:0915”(physical association) | 0.560 |
BioGRID (99): TRIP13 (Two-hybrid), ARSA (Affinity Capture-MS), ARSA (Affinity Capture-MS), ARSA (Affinity Capture-MS), SUMF1 (Affinity Capture-MS), GALNS (Affinity Capture-MS), MESDC2 (Affinity Capture-MS), ZBTB43 (Affinity Capture-MS), PDIA5 (Affinity Capture-MS), PPOX (Affinity Capture-MS), GFPT2 (Affinity Capture-MS), TRIP13 (Two-hybrid), TRIP13 (Two-hybrid), SUMF1 (Affinity Capture-MS), ZBTB43 (Affinity Capture-MS)
ESM2 similar proteins: A0A0U1RPR8, O18835, O19179, O62763, O77695, O88941, O97524, P08236, P10253, P14000, P15289, P15589, P15848, P21836, P22303, P22412, P23795, P26010, P33727, P37136, P50427, P50428, P50429, P50430, P50473, P51688, P51689, P51690, P51839, P51840, P52785, P54793, Q02846, Q08DD1, Q13724, Q29499, Q32KH8, Q32KH9, Q32KJ9, Q3TYD4
Diamond homologs: P08842, P14000, P15289, P15589, P20713, P34059, P50427, P50428, P50473, P51689, P51690, P54793, Q08DD1, Q32KH5, Q32KH8, Q32KH9, Q32KJ6, Q32KJ9, Q3TYD4, Q571E4, Q5FYA8, Q5FYB0, Q60HH5, Q8BM89, Q8WNQ7, Q9X759, T2KMG4, T2KN90, P22304, P31447, Q08890, Q32KI9, Q32KJ8, Q5FYB1, Q96EG1, P33727, P50430, Q32KH7, Q8A2F6, Q8A2H2
SIGNOR signaling
2 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| ARSA | “up-regulates activity” | HBB | acetylation |
| ARSA | “up-regulates activity” | HBA1 | acetylation |
Disease & clinical
Clinical variants and AI predictions
ClinVar
1329 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 164 |
| Likely pathogenic | 134 |
| Uncertain significance | 375 |
| Likely benign | 429 |
| Benign | 46 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1041453 | NM_000487.6(ARSA):c.385G>A (p.Gly129Arg) | Pathogenic |
| 1068641 | NM_000487.6(ARSA):c.685-2A>G | Pathogenic |
| 1070652 | NM_000487.6(ARSA):c.1107+1G>T | Pathogenic |
| 1072391 | NC_000022.10:g.(?51063563)(51066217_?)del | Pathogenic |
| 1072392 | NC_000022.10:g.(?51064344)(51066227_?)del | Pathogenic |
| 1098313 | NM_000487.6(ARSA):c.582del (p.Trp195fs) | Pathogenic |
| 1177268 | NM_000487.6(ARSA):c.1228_1229del (p.Thr410fs) | Pathogenic |
| 1210332 | NM_000487.6(ARSA):c.488G>C (p.Cys163Ser) | Pathogenic |
| 1323434 | NM_000487.6(ARSA):c.208_209del (p.Leu70fs) | Pathogenic |
| 1381264 | NM_000487.6(ARSA):c.731C>A (p.Ser244Ter) | Pathogenic |
| 1406153 | NM_000487.6(ARSA):c.272del (p.Pro91fs) | Pathogenic |
| 1421225 | NM_000487.6(ARSA):c.270C>A (p.Tyr90Ter) | Pathogenic |
| 1436884 | NM_000487.6(ARSA):c.157_164del (p.Gln53fs) | Pathogenic |
| 1452278 | NM_000487.6(ARSA):c.1136del (p.Pro379fs) | Pathogenic |
| 1452818 | NM_000487.6(ARSA):c.617dup (p.Ala207fs) | Pathogenic |
| 1455014 | NC_000022.10:g.(?51065065)(51065595_?)del | Pathogenic |
| 1455794 | NM_000487.6(ARSA):c.302_303delinsTT (p.Gly101Val) | Pathogenic |
| 1457224 | NM_000487.6(ARSA):c.1293T>A (p.Tyr431Ter) | Pathogenic |
| 1460113 | NM_000487.6(ARSA):c.13del (p.Ala5fs) | Pathogenic |
| 1476243 | NM_000487.6(ARSA):c.393_425del (p.Pro132_Gly142del) | Pathogenic |
| 1685545 | NM_000487.6(ARSA):c.1228dup (p.Thr410fs) | Pathogenic |
| 1707612 | NM_000487.6(ARSA):c.1030del (p.Ala344fs) | Pathogenic |
| 1707618 | NM_000487.6(ARSA):c.891_895del (p.Gly298fs) | Pathogenic |
| 188949 | NM_000487.6(ARSA):c.979+1G>A | Pathogenic |
| 188976 | NM_000487.6(ARSA):c.240dup (p.Gly81fs) | Pathogenic |
| 189073 | NM_000487.6(ARSA):c.304del (p.Leu102fs) | Pathogenic |
| 189170 | NM_000487.6(ARSA):c.1223_1231del (p.Ser408_Thr410del) | Pathogenic |
| 1956862 | NM_000487.6(ARSA):c.311del (p.Leu104fs) | Pathogenic |
| 1963676 | NM_000487.6(ARSA):c.245G>T (p.Arg82Leu) | Pathogenic |
| 1982373 | NM_000487.6(ARSA):c.263del (p.Gly88fs) | Pathogenic |
SpliceAI
1823 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 22:50625577:AC:A | donor_gain | 1.0000 |
| 22:50625931:CCTA:C | donor_loss | 1.0000 |
| 22:50625932:CTA:C | donor_loss | 1.0000 |
| 22:50625933:TACCT:T | donor_loss | 1.0000 |
| 22:50625934:A:AT | donor_loss | 1.0000 |
| 22:50625935:C:T | donor_loss | 1.0000 |
| 22:50626061:CGC:C | acceptor_gain | 1.0000 |
| 22:50626828:ACTT:A | donor_loss | 1.0000 |
| 22:50626830:TTA:T | donor_loss | 1.0000 |
| 22:50626832:A:AC | donor_gain | 1.0000 |
| 22:50626833:C:CA | donor_gain | 1.0000 |
| 22:50626833:CG:C | donor_gain | 1.0000 |
| 22:50626833:CGT:C | donor_gain | 1.0000 |
| 22:50626833:CGTG:C | donor_gain | 1.0000 |
| 22:50626833:CGTGA:C | donor_gain | 1.0000 |
| 22:50627007:C:CT | acceptor_gain | 1.0000 |
| 22:50627021:G:T | acceptor_gain | 1.0000 |
| 22:50627268:T:TA | donor_gain | 1.0000 |
| 22:50627550:CTTTA:C | donor_loss | 1.0000 |
| 22:50627551:TTTAC:T | donor_loss | 1.0000 |
| 22:50627552:TTA:T | donor_loss | 1.0000 |
| 22:50627553:TAC:T | donor_loss | 1.0000 |
| 22:50627891:C:CA | donor_gain | 1.0000 |
| 22:50627911:T:TA | donor_gain | 1.0000 |
| 22:50625607:T:A | donor_gain | 0.9900 |
| 22:50626060:ACGCC:A | acceptor_loss | 0.9900 |
| 22:50626062:GCCTG:G | acceptor_loss | 0.9900 |
| 22:50626063:CCTG:C | acceptor_loss | 0.9900 |
| 22:50626064:C:CC | acceptor_gain | 0.9900 |
| 22:50626064:CTGG:C | acceptor_loss | 0.9900 |
AlphaMissense
0 scored. Top likely-pathogenic:
dbSNP variants (sampled 300 via entrez): RS1000378031 (22:50626508 T>C), RS1000431855 (22:50626306 A>G,T), RS1000715285 (22:50627582 C>G,T), RS1000766642 (22:50627401 G>A), RS1000945488 (22:50623060 G>C), RS1001100248 (22:50625684 G>A,C), RS1001331166 (22:50623846 C>T), RS1001680534 (22:50624044 C>T), RS1002298028 (22:50625623 A>G), RS1002388779 (22:50628560 C>G), RS1002426091 (22:50629817 C>T), RS1002441093 (22:50628330 G>C,T), RS1002825563 (22:50628738 T>G), RS1002909590 (22:50630048 A>G), RS1003164509 (22:50628535 A>G)
Disease associations
OMIM: gene MIM:607574 | disease phenotypes: MIM:250100, MIM:108600, MIM:312080, MIM:619418, MIM:215700
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| metachromatic leukodystrophy, juvenile form | Definitive | Autosomal recessive |
| metachromatic leukodystrophy | Definitive | Autosomal recessive |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| metachromatic leukodystrophy | Definitive | AR |
Mondo (15): metachromatic leukodystrophy (MONDO:0018868), neurodevelopmental disorder (MONDO:0700092), metachromatic leukodystrophy, juvenile form (MONDO:0009591), metachromatic leukodystrophy, late infantile form (MONDO:0017729), lysosomal storage disease (MONDO:0002561), intellectual disability (MONDO:0001071), metachromatic leukodystrophy, adult form (MONDO:0017730), congenital nervous system disorder (MONDO:0002320), spastic ataxia (MONDO:0017845), leukodystrophy (MONDO:0019046), primary amenorrhea (MONDO:1060208), autosomal recessive sideroblastic anemia (MONDO:0016828), frontotemporal dementia (MONDO:0017276), neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset 2 (MONDO:0030375), citrullinemia (MONDO:0015991)
Orphanet (11): Metachromatic leukodystrophy (Orphanet:512), Metachromatic leukodystrophy, juvenile form (Orphanet:309263), Metachromatic leukodystrophy, late infantile form (Orphanet:309256), Lysosomal disease (Orphanet:68366), Metachromatic leukodystrophy, adult form (Orphanet:309271), Spastic ataxia (Orphanet:316226), Leukodystrophy (Orphanet:68356), Autosomal recessive sideroblastic anemia (Orphanet:260305), Frontotemporal dementia (Orphanet:282), Citrullinemia (Orphanet:187), NON RARE IN EUROPE: Unexplained intellectual disability (Orphanet:319658)
HPO phenotypes
66 total (30 of 66 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000020 | Urinary incontinence |
| HP:0000648 | Optic atrophy |
| HP:0000649 | Abnormality of visual evoked potentials |
| HP:0000712 | Emotional lability |
| HP:0000716 | Depression |
| HP:0000726 | Dementia |
| HP:0000736 | Short attention span |
| HP:0000738 | Hallucinations |
| HP:0000746 | Delusion |
| HP:0000762 | Decreased nerve conduction velocity |
| HP:0001082 | Cholecystitis |
| HP:0001249 | Intellectual disability |
| HP:0001250 | Seizure |
| HP:0001251 | Ataxia |
| HP:0001252 | Hypotonia |
| HP:0001257 | Spasticity |
| HP:0001260 | Dysarthria |
| HP:0001265 | Hyporeflexia |
| HP:0001268 | Mental deterioration |
| HP:0001283 | Bulbar palsy |
| HP:0001288 | Gait disturbance |
| HP:0001290 | Generalized hypotonia |
| HP:0001324 | Muscle weakness |
| HP:0001332 | Dystonia |
| HP:0001347 | Hyperreflexia |
| HP:0001939 | Abnormality of metabolism/homeostasis |
| HP:0002066 | Gait ataxia |
| HP:0002072 | Chorea |
| HP:0002080 | Intention tremor |
GWAS associations
6 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002147_20 | Fibrinogen | 3.000000e-08 |
| GCST004122_13 | Fibrinogen levels | 3.000000e-08 |
| GCST004642_2 | QT interval (ambient particulate matter interaction) | 1.000000e-06 |
| GCST007447_2 | vWF and FVIII levels | 5.000000e-08 |
| GCST009733_93 | Urinary metabolite levels in chronic kidney disease | 9.000000e-13 |
| GCST90011899_89 | Aspartate aminotransferase levels | 2.000000e-14 |
EFO canonical traits (5, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004682 | QT interval |
| EFO:0008255 | particulate matter air pollution measurement |
| EFO:0004630 | factor VIII measurement |
| EFO:0005116 | urinary metabolite measurement |
| EFO:0004736 | aspartate aminotransferase measurement |
MeSH disease descriptors (7)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D020159 | Citrullinemia | C10.228.140.163.100.937.374; C16.320.565.100.940.374; C16.320.565.189.937.374; C18.452.132.100.937.374; C18.452.648.100.940.374; C18.452.648.189.937.374 |
| D057180 | Frontotemporal Dementia | C10.228.140.380.266.299; C10.574.950.300.299; C18.452.845.800.300.299; F03.615.400.380.299 |
| D008607 | Intellectual Disability | C10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539 |
| D007966 | Leukodystrophy, Metachromatic | C10.228.140.163.100.362.550; C10.228.140.163.100.435.825.850.500; C10.228.140.695.625.550; C10.314.400.550; C16.320.565.189.362.550; C16.320.565.189.435.825.850.500; C16.320.565.398.641.803.925.500; C16.320.565.595.554.825.850.500; C18.452.132.100.362.550; C18.452.132.100.435.825.850.500; C18.452.584.563.641.803.925.500; C18.452.648.189.362.550; C18.452.648.189.435.825.850.500; C18.452.648.398.641.803.925.500; C18.452.648.595.554.825.850.500 |
| D016464 | Lysosomal Storage Diseases | C16.320.565.595; C18.452.648.595 |
| D065886 | Neurodevelopmental Disorders | F03.625 |
| C564815 | Spastic Ataxia (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL2193 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB clinical annotations
1 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs2071421 | Efficacy | 3 | methylphenidate | Attention Deficit Disorder with Hyperactivity |
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs2071421 | ARSA | 3 | 0.00 | 1 | methylphenidate |
CTD chemical–gene interactions
33 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | increases methylation, increases mutagenesis | 2 |
| Tobacco Smoke Pollution | affects expression, increases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| GSK-J4 | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| bisphenol A | increases expression | 1 |
| glycidyl methacrylate | decreases expression | 1 |
| sodium arsenite | increases expression | 1 |
| perfluorooctanoic acid | increases expression | 1 |
| perfluorooctane sulfonic acid | increases expression | 1 |
| CD 437 | decreases expression | 1 |
| 3-(4’-hydroxy-3’-adamantylbiphenyl-4-yl)acrylic acid | decreases expression | 1 |
| nutlin 3 | affects cotreatment, increases expression, increases secretion | 1 |
| bisphenol B | increases expression | 1 |
| jinfukang | affects cotreatment, increases expression | 1 |
| (+)-JQ1 compound | increases expression | 1 |
| MT19c compound | decreases expression | 1 |
| bisphenol AF | increases expression | 1 |
| Air Pollutants | affects expression, increases abundance | 1 |
| Calcitriol | increases expression, affects cotreatment | 1 |
| Cisplatin | affects cotreatment, increases expression | 1 |
| Dactinomycin | affects cotreatment, increases expression, increases secretion | 1 |
| Dichlorodiphenyl Dichloroethylene | decreases expression | 1 |
| Diazinon | increases methylation | 1 |
| Diethylhexyl Phthalate | decreases expression | 1 |
| Ozone | affects expression, increases abundance | 1 |
| Quercetin | increases expression | 1 |
| Smoke | decreases expression | 1 |
| Testosterone | affects cotreatment, increases expression | 1 |
| Tetrachlorodibenzodioxin | affects expression | 1 |
ChEMBL screening assays
4 unique, capped per target: 3 binding, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3215185 | Functional | PubChem BioAssay. qHTS screen for enhancers of Arylsulfatase A (ASA1): LOPAC Validation Assay. (Class of assay: confirmatory) | PubChem BioAssay data set |
| CHEMBL5098109 | Binding | Inhibition of ARSA (unknown origin) using 4-methylumbelliferyl sulfate (4-MUS) as a substrate by fluorescent assay | Recent advances of quinones as a privileged structure in drug discovery. — Eur J Med Chem |
Cellosaurus cell lines
7 cell lines: 4 cancer cell line, 1 finite cell line, 1 induced pluripotent stem cell, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_6B33 | GM00197 | Finite cell line | Male |
| CVCL_A4WI | MPIi007-A | Induced pluripotent stem cell | Male |
| CVCL_D1LJ | Abcam K-562 ARSA KO | Cancer cell line | Female |
| CVCL_D2I5 | Abcam Raji ARSA KO | Cancer cell line | Male |
| CVCL_D5F7 | HeLa::TMEM192-3xHA ARSA partial KO | Cancer cell line | Female |
| CVCL_UQ16 | Abcam Jurkat ARSA KO | Cancer cell line | Male |
| CVCL_YP18 | ARSA-/- immortalized MSC | Transformed cell line | Sex unspecified |
Clinical trials (associated diseases)
263 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT04586348 | PHASE4 | UNKNOWN | Prenatal Iodine Supplementation and Early Childhood Neurodevelopment |
| NCT04873115 | PHASE4 | UNKNOWN | Double-blind, Placebo-controlled, Randomized Clinical Trial Comparing the Efficacy and Safety of Sialanar Plus orAl rehabiLitation Against Placebo Plus Oral Rehabilitation for chIldren and Adolescents With seVere Sialorrhoea and Neurodisabilties, |
| NCT04283227 | PHASE3 | ACTIVE_NOT_RECRUITING | OTL-200 in Patients With Late Juvenile Metachromatic Leukodystrophy (MLD) |
| NCT02559102 | PHASE3 | COMPLETED | Dexmedetomidine Sedation Versus General Anaesthesia for Inguinal Hernia Surgery in Infants |
| NCT02757079 | PHASE3 | COMPLETED | Study of the Efficacy and Safety of NPC-15 for Sleep Disorders of Children With Neurodevelopmental Disorders |
| NCT06915480 | PHASE3 | RECRUITING | Reducing Missed Appointments |
| NCT07377032 | PHASE3 | RECRUITING | TAP-GRIN: Interventional Study on Patients With GRIN-related Neurodevelopmental Disorders |
| NCT00654433 | PHASE3 | TERMINATED | ALD-101 Adjuvant Therapy of Unrelated Umbilical Cord Blood Transfusion (UCBT) in Patients With Inherited Metabolic Diseases |
| NCT00383448 | PHASE2 | COMPLETED | HSCT for High Risk Inherited Inborn Errors |
| NCT01043640 | PHASE2 | COMPLETED | Allogeneic Bone Marrow Transplant for Inherited Metabolic Disorders |
| NCT01303146 | PHASE2 | COMPLETED | Efficacy METAZYM for the Treatment Metachromatic Leukodystrophy Treated With Hematopoietic Stem Cell Transplantation |
| NCT02171104 | PHASE2 | ACTIVE_NOT_RECRUITING | MT2013-31: Allo HCT for Metabolic Disorders and Severe Osteopetrosis |
| NCT03392987 | PHASE2 | COMPLETED | A Safety and Efficacy Study of Cryopreserved OTL-200 for Treatment of Metachromatic Leukodystrophy (MLD) |
| NCT03771898 | PHASE2 | ACTIVE_NOT_RECRUITING | A Study of Intrathecal SHP611 in Children With Metachromatic Leukodystrophy |
| NCT02909959 | PHASE2 | COMPLETED | Sulforaphane for the Treatment of Young Men With Autism Spectrum Disorder |
| NCT06081348 | PHASE2 | RECRUITING | Sertraline vs. Placebo in the Treatment of Anxiety in Children and AdoLescents With NeurodevelopMental Disorders |
| NCT06352372 | PHASE2 | COMPLETED | Safety and Efficacy of tPBM for Epileptiform Activity in Autism |
| NCT06130228 | PHASE2 | UNKNOWN | Nutritional Therapy in Late-onset Pompe Disease |
| NCT00418561 | PHASE1 | COMPLETED | Metazym for the Treatment of Patients With Late Infantile Metachromatic Leukodystrophy (MLD) |
| NCT01586455 | PHASE1 | COMPLETED | Human Placental-Derived Stem Cell Transplantation |
| NCT00503191 | PHASE1 | COMPLETED | NeuroModulation Technique Treatment of Autism |
| NCT04475848 | PHASE1 | COMPLETED | A Study to Investigate the Safety, Tolerability, Pharmacokinetics, Pharmacodynamics and Food Effect of RO6953958 in Healthy Participants |
| NCT06300398 | PHASE1 | COMPLETED | IAMA-6 Oral Dose Study in Healthy Adults |
| NCT00215527 | PHASE1 | TERMINATED | Intrathecal Enzyme Replacement Therapy for Spinal Cord Compression in Mucopolysaccharidosis (MPS) I |
| NCT00744692 | PHASE1 | COMPLETED | Reduced Intensity Conditioning for Umbilical Cord Blood Transplant in Pediatric Patients With Non-Malignant Disorders |
| NCT00786968 | PHASE1 | TERMINATED | Extension Study of Intrathecal Enzyme Replacement Therapy for MPS I |
| NCT01003912 | PHASE1 | WITHDRAWN | Fetal Umbilical Cord Blood (UCB) Transplant for Lysosomal Storage Diseases |
| NCT02699190 | Not specified | COMPLETED | LeukoSEQ: Whole Genome Sequencing as a First-Line Diagnostic Tool for Leukodystrophies |
| NCT03047369 | Not specified | RECRUITING | The Myelin Disorders Biorepository Project |
| NCT03333200 | Not specified | RECRUITING | Longitudinal Study of Neurodegenerative Disorders |
| NCT05119764 | Not specified | COMPLETED | Manual Lymphatic Drainage Before and After Total Knee Replacement, a Single-center Observer-blinded Randomized Controlled Trial |
| NCT00176904 | PHASE2/PHASE3 | COMPLETED | Stem Cell Transplant for Inborn Errors of Metabolism |
| NCT01372228 | PHASE1/PHASE2 | TERMINATED | Phase I/II Pilot Study of Mixed Chimerism to Treat Inherited Metabolic Disorders |
| NCT01510028 | PHASE1/PHASE2 | COMPLETED | Multicenter Study of HGT-1110 Administered Intrathecally in Children With Metachromatic Leukodystrophy (MLD) |
| NCT01560182 | PHASE1/PHASE2 | COMPLETED | Gene Therapy for Metachromatic Leukodystrophy (MLD) |
| NCT01801709 | PHASE1/PHASE2 | COMPLETED | Intracerebral Gene Therapy for Children With Early Onset Forms of Metachromatic Leukodystrophy |
| NCT01887938 | PHASE1/PHASE2 | COMPLETED | An Efficacy and Safety Study of HGT-1110 in Participants With Metachromatic Leukodystrophy |
| NCT02559830 | PHASE1/PHASE2 | UNKNOWN | Autologous Hematopoietic Stem Cell Gene Therapy for Metachromatic Leukodystrophy and Adrenoleukodystrophy |
| NCT00004378 | Not specified | COMPLETED | Stem Cell Transplantation (SCT) for Genetic Diseases |
| NCT00005900 | Not specified | UNKNOWN | Study of Pulmonary Complications in Pediatric Patients With Storage Disorders Undergoing Allogeneic Hematopoietic Stem Cell Transplantation |
Related Atlas pages
- Associated diseases: metachromatic leukodystrophy, juvenile form, metachromatic leukodystrophy
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): autosomal recessive sideroblastic anemia, citrullinemia, frontotemporal dementia, leukodystrophy, lysosomal storage disease, metachromatic leukodystrophy, metachromatic leukodystrophy, adult form, metachromatic leukodystrophy, juvenile form, metachromatic leukodystrophy, late infantile form, neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset 2, primary amenorrhea, spastic ataxia