ASAP1-IT2

Summary

ASAP1-IT2 (ASAP1 intronic transcript 2, HGNC:48917) is a long non-coding RNA gene on chromosome 8q24.21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:48917
Approved symbol	ASAP1-IT2
Name	ASAP1 intronic transcript 2
Location	8q24.21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000280543
Ensembl biotype	lncRNA
Entrez	100507117
RNAcentral	URS000075D473 — lncRNA, 2031 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000626977

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000626977 — 1 exons

Exon	Start	End
ENSE00003771375	130082738	130084768

Expression profiles

Bgee: expression breadth ubiquitous, 159 present calls, max score 85.67.

Top tissues by expression

214 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	85.67	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.30	gold quality
trabecular bone tissue	UBERON:0002483	75.83	gold quality
bone marrow cell	CL:0002092	73.71	silver quality
colonic epithelium	UBERON:0000397	70.24	silver quality
visceral pleura	UBERON:0002401	66.42	gold quality
upper leg skin	UBERON:0004262	65.43	gold quality
parietal pleura	UBERON:0002400	63.96	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	63.15	gold quality
blood	UBERON:0000178	63.09	gold quality
tibia	UBERON:0000979	63.04	gold quality
skin of hip	UBERON:0001554	60.99	gold quality
monocyte	CL:0000576	60.45	gold quality
ventricular zone	UBERON:0003053	59.61	gold quality
nipple	UBERON:0002030	58.69	silver quality
cartilage tissue	UBERON:0002418	58.24	silver quality
cortical plate	UBERON:0005343	57.74	silver quality
seminal vesicle	UBERON:0000998	57.06	gold quality
duodenum	UBERON:0002114	56.31	silver quality
placenta	UBERON:0001987	56.21	silver quality
hindlimb stylopod muscle	UBERON:0004252	55.79	gold quality
ganglionic eminence	UBERON:0004023	55.77	silver quality
urinary bladder	UBERON:0001255	55.49	gold quality
stromal cell of endometrium	CL:0002255	55.28	gold quality
mammalian vulva	UBERON:0000997	54.43	silver quality
urethra	UBERON:0000057	54.38	gold quality
lateral nuclear group of thalamus	UBERON:0002736	54.27	gold quality
jejunal mucosa	UBERON:0000399	53.99	silver quality
apex of heart	UBERON:0002098	53.92	gold quality
pigmented layer of retina	UBERON:0001782	53.61	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.