ATF6-DT

Summary

ATF6-DT (ATF6 divergent transcript, HGNC:55826) is a long non-coding RNA gene on chromosome 1q23.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55826
Approved symbol	ATF6-DT
Name	ATF6 divergent transcript
Location	1q23.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226889
Ensembl biotype	lncRNA
Entrez	102724329
RNAcentral	URS00026A1C38 — lncRNA, 767 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 13 — 13 lncRNA

ENST00000431097, ENST00000702792, ENST00000792236, ENST00000792237, ENST00000792238, ENST00000792239, ENST00000792240, ENST00000792241, ENST00000792242, ENST00000792243, ENST00000792244, ENST00000792245, ENST00000792246

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000431097 — 2 exons

Exon	Start	End
ENSE00001726653	161765830	161766227
ENSE00004174083	161764840	161765501

Expression profiles

Bgee: expression breadth ubiquitous, 121 present calls, max score 85.07.

Top tissues by expression

121 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.07	silver quality
bone marrow cell	CL:0002092	71.41	gold quality
bone marrow	UBERON:0002371	65.86	gold quality
skeletal muscle tissue	UBERON:0001134	65.37	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.08	gold quality
ganglionic eminence	UBERON:0004023	64.73	gold quality
muscle tissue	UBERON:0002385	64.32	gold quality
granulocyte	CL:0000094	64.05	gold quality
vermiform appendix	UBERON:0001154	59.21	gold quality
leukocyte	CL:0000738	58.62	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	58.24	gold quality
monocyte	CL:0000576	57.95	gold quality
prefrontal cortex	UBERON:0000451	57.61	gold quality
duodenum	UBERON:0002114	57.24	gold quality
muscle of leg	UBERON:0001383	57.05	gold quality
tonsil	UBERON:0002372	56.88	gold quality
placenta	UBERON:0001987	56.86	gold quality
islet of Langerhans	UBERON:0000006	56.64	gold quality
gastrocnemius	UBERON:0001388	56.39	gold quality
lymph node	UBERON:0000029	56.18	gold quality
liver	UBERON:0002107	55.65	gold quality
gall bladder	UBERON:0002110	54.52	gold quality
endometrium	UBERON:0001295	54.41	gold quality
calcaneal tendon	UBERON:0003701	54.15	gold quality
right lobe of liver	UBERON:0001114	53.72	gold quality
stromal cell of endometrium	CL:0002255	53.45	silver quality
smooth muscle tissue	UBERON:0001135	52.06	gold quality
pancreas	UBERON:0001264	51.72	gold quality
primary visual cortex	UBERON:0002436	51.50	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	51.00	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.87

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.