ATF7-AS1

Summary

ATF7-AS1 (ATF7 antisense RNA 1, HGNC:58279) is a long non-coding RNA gene on chromosome 12q13.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58279
Approved symbol	ATF7-AS1
Name	ATF7 antisense RNA 1
Location	12q13.13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000257550
Ensembl biotype	lncRNA
Entrez	100652999
RNAcentral	URS000075E357 — lncRNA, 2317 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000548347

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000548347 — 3 exons

Exon	Start	End
ENSE00002336000	53514353	53514481
ENSE00002384347	53515509	53517608
ENSE00002392676	53513891	53514051

Expression profiles

Bgee: expression breadth ubiquitous, 111 present calls, max score 78.08.

Top tissues by expression

207 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.08	gold quality
colonic epithelium	UBERON:0000397	73.40	silver quality
parotid gland	UBERON:0001831	68.69	gold quality
bone marrow cell	CL:0002092	65.21	silver quality
stromal cell of endometrium	CL:0002255	64.52	gold quality
right lung	UBERON:0002167	62.31	gold quality
nasal cavity epithelium	UBERON:0005384	61.37	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	55.69	gold quality
buccal mucosa cell	CL:0002336	55.51	gold quality
upper lobe of left lung	UBERON:0008952	55.43	gold quality
upper lobe of lung	UBERON:0008948	54.17	gold quality
monocyte	CL:0000576	53.83	silver quality
lung	UBERON:0002048	53.49	gold quality
biceps brachii	UBERON:0001507	53.35	gold quality
cerebellar cortex	UBERON:0002129	52.92	gold quality
cerebellar hemisphere	UBERON:0002245	52.90	gold quality
cerebellum	UBERON:0002037	52.01	gold quality
tendon	UBERON:0000043	51.89	gold quality
right lobe of thyroid gland	UBERON:0001119	51.57	gold quality
blood	UBERON:0000178	51.13	gold quality
tendon of biceps brachii	UBERON:0008188	51.13	gold quality
right hemisphere of cerebellum	UBERON:0014890	51.00	gold quality
medial globus pallidus	UBERON:0002477	50.29	gold quality
saliva-secreting gland	UBERON:0001044	50.00	gold quality
thyroid gland	UBERON:0002046	49.78	gold quality
descending thoracic aorta	UBERON:0002345	49.78	gold quality
sperm	CL:0000019	49.58	gold quality
oocyte	CL:0000023	49.34	gold quality
left lobe of thyroid gland	UBERON:0001120	49.11	gold quality
uterine cervix	UBERON:0000002	48.29	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.76

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.