ATOX1-AS1

Summary

ATOX1-AS1 (ATOX1 antisense RNA 1, HGNC:55528) is a long non-coding RNA gene on chromosome 5q33.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55528
Approved symbol	ATOX1-AS1
Name	ATOX1 antisense RNA 1
Location	5q33.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000253921
Ensembl biotype	lncRNA
Entrez	105378235
RNAcentral	URS0002A3FC24 — lncRNA, 587 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000518182, ENST00000779501, ENST00000779502

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000518182 — 3 exons

Exon	Start	End
ENSE00002117292	151767041	151767247
ENSE00002128509	151753992	151754122
ENSE00002130337	151761290	151761521

Expression profiles

Bgee: expression breadth ubiquitous, 125 present calls, max score 89.94.

Top tissues by expression

125 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	89.94	gold quality
skeletal muscle tissue	UBERON:0001134	67.29	gold quality
bone marrow cell	CL:0002092	67.27	silver quality
islet of Langerhans	UBERON:0000006	66.60	gold quality
cortical plate	UBERON:0005343	66.37	gold quality
ganglionic eminence	UBERON:0004023	64.03	gold quality
muscle of leg	UBERON:0001383	63.89	gold quality
gastrocnemius	UBERON:0001388	63.44	gold quality
corpus callosum	UBERON:0002336	62.03	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	61.32	gold quality
hindlimb stylopod muscle	UBERON:0004252	61.31	gold quality
calcaneal tendon	UBERON:0003701	60.81	gold quality
endometrium	UBERON:0001295	60.44	gold quality
monocyte	CL:0000576	60.41	gold quality
rectum	UBERON:0001052	60.41	gold quality
leukocyte	CL:0000738	60.37	gold quality
urinary bladder	UBERON:0001255	59.75	gold quality
lymph node	UBERON:0000029	59.63	gold quality
prefrontal cortex	UBERON:0000451	58.86	gold quality
gall bladder	UBERON:0002110	58.83	gold quality
right adrenal gland cortex	UBERON:0035827	58.67	gold quality
vermiform appendix	UBERON:0001154	57.66	gold quality
liver	UBERON:0002107	57.43	gold quality
substantia nigra	UBERON:0002038	57.28	gold quality
tibial nerve	UBERON:0001323	57.20	gold quality
blood	UBERON:0000178	57.09	gold quality
descending thoracic aorta	UBERON:0002345	56.89	gold quality
tonsil	UBERON:0002372	56.79	gold quality
lower esophagus muscularis layer	UBERON:0035833	56.75	gold quality
lower esophagus	UBERON:0013473	56.73	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.95

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.