ATP1B3-AS1

Summary

ATP1B3-AS1 (ATP1B3 antisense RNA 1, HGNC:40088) is a long non-coding RNA gene on chromosome 3q23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40088
Approved symbol	ATP1B3-AS1
Name	ATP1B3 antisense RNA 1
Location	3q23
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000244124
Ensembl biotype	lncRNA
Entrez	100874077
RNAcentral	URS00001BD8BB — lncRNA, 376 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000492725

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000492725 — 2 exons

Exon	Start	End
ENSE00001891940	141918736	141919021
ENSE00001933650	141918252	141918341

Expression profiles

Bgee: expression breadth ubiquitous, 130 present calls, max score 83.05.

Top tissues by expression

130 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right hemisphere of cerebellum	UBERON:0014890	83.05	gold quality
cerebellar hemisphere	UBERON:0002245	82.52	gold quality
cerebellar cortex	UBERON:0002129	82.47	gold quality
cerebellum	UBERON:0002037	82.17	gold quality
adenohypophysis	UBERON:0002196	82.11	gold quality
popliteal artery	UBERON:0002250	81.36	gold quality
tibial artery	UBERON:0007610	81.36	gold quality
omental fat pad	UBERON:0010414	80.63	gold quality
adrenal tissue	UBERON:0018303	80.10	gold quality
skin of leg	UBERON:0001511	79.58	gold quality
endometrium	UBERON:0001295	79.48	gold quality
tibial nerve	UBERON:0001323	79.45	gold quality
right ovary	UBERON:0002118	79.31	gold quality
zone of skin	UBERON:0000014	79.28	gold quality
sural nerve	UBERON:0015488	79.06	gold quality
lower esophagus mucosa	UBERON:0035834	78.77	gold quality
vagina	UBERON:0000996	78.72	gold quality
left ovary	UBERON:0002119	78.72	gold quality
left uterine tube	UBERON:0001303	78.71	gold quality
skin of abdomen	UBERON:0001416	78.55	gold quality
adipose tissue	UBERON:0001013	78.48	gold quality
pituitary gland	UBERON:0000007	78.33	gold quality
monocyte	CL:0000576	78.19	gold quality
ovary	UBERON:0000992	77.96	gold quality
hindlimb stylopod muscle	UBERON:0004252	77.12	gold quality
leukocyte	CL:0000738	76.95	gold quality
subcutaneous adipose tissue	UBERON:0002190	76.92	gold quality
ascending aorta	UBERON:0001496	76.68	gold quality
right lung	UBERON:0002167	75.97	gold quality
thoracic aorta	UBERON:0001515	75.91	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.20

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.