ATP6AP1-DT

Summary

ATP6AP1-DT (ATP6AP1 divergent transcript, HGNC:25138) is a long non-coding RNA gene on chromosome Xq28.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:25138
Approved symbol	ATP6AP1-DT
Name	ATP6AP1 divergent transcript
Location	Xq28
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000197180
Ensembl biotype	lncRNA
Entrez	158960
RNAcentral	URS000075C8C8 — lncRNA, 620 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000360656, ENST00000702268, ENST00000728500, ENST00000728501

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000360656 — 2 exons

Exon	Start	End
ENSE00004055036	154428128	154428549
ENSE00004055040	154424377	154424625

Expression profiles

Bgee: expression breadth ubiquitous, 226 present calls, max score 99.24.

Top tissues by expression

241 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
oviduct epithelium	UBERON:0004804	99.24	gold quality
bronchial epithelial cell	CL:0002328	94.50	gold quality
bronchus	UBERON:0002185	94.20	gold quality
inferior vagus X ganglion	UBERON:0005363	90.22	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	89.20	gold quality
ventral tegmental area	UBERON:0002691	89.18	gold quality
spinal cord	UBERON:0002240	89.16	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	88.86	gold quality
mucosa of paranasal sinus	UBERON:0005030	88.75	gold quality
trachea	UBERON:0003126	88.41	gold quality
subthalamic nucleus	UBERON:0001906	88.40	gold quality
renal medulla	UBERON:0000362	87.32	gold quality
pons	UBERON:0000988	87.28	gold quality
right uterine tube	UBERON:0001302	87.15	gold quality
dorsal plus ventral thalamus	UBERON:0001897	87.03	gold quality
medulla oblongata	UBERON:0001896	86.75	gold quality
midbrain	UBERON:0001891	86.32	gold quality
epithelium of nasopharynx	UBERON:0001951	86.31	gold quality
fallopian tube	UBERON:0003889	86.27	gold quality
nasal cavity epithelium	UBERON:0005384	86.23	silver quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.05	gold quality
substantia nigra	UBERON:0002038	86.05	gold quality
superior vestibular nucleus	UBERON:0007227	85.58	gold quality
sperm	CL:0000019	85.55	gold quality
right adrenal gland cortex	UBERON:0035827	84.90	gold quality
putamen	UBERON:0001874	84.75	gold quality
amygdala	UBERON:0001876	84.67	gold quality
right adrenal gland	UBERON:0001233	84.03	gold quality
pigmented layer of retina	UBERON:0001782	83.58	gold quality
hypothalamus	UBERON:0001898	83.36	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.00

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.