ATP9B-AS1

Summary

ATP9B-AS1 (ATP9B antisense RNA 1, HGNC:58587) is a long non-coding RNA gene on chromosome 18q23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58587
Approved symbol	ATP9B-AS1
Name	ATP9B antisense RNA 1
Location	18q23
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267628
Ensembl biotype	lncRNA
Entrez	142592823

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000591742, ENST00000731848

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000591742 — 2 exons

Exon	Start	End
ENSE00004061658	79254358	79254907
ENSE00004061659	79253572	79253805

Expression profiles

Bgee: expression breadth broad, 69 present calls, max score 91.89.

Top tissues by expression

69 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
C1 segment of cervical spinal cord	UBERON:0006469	91.89	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.44	gold quality
colonic epithelium	UBERON:0000397	74.72	gold quality
substantia nigra	UBERON:0002038	68.86	gold quality
bone marrow cell	CL:0002092	67.04	silver quality
uterine cervix	UBERON:0000002	66.74	silver quality
hindlimb stylopod muscle	UBERON:0004252	65.95	gold quality
ovary	UBERON:0000992	64.95	silver quality
primary visual cortex	UBERON:0002436	62.90	gold quality
prefrontal cortex	UBERON:0000451	55.83	gold quality
corpus callosum	UBERON:0002336	55.41	gold quality
hypothalamus	UBERON:0001898	55.07	gold quality
frontal cortex	UBERON:0001870	52.80	gold quality
heart left ventricle	UBERON:0002084	50.84	gold quality
brain	UBERON:0000955	50.34	gold quality
monocyte	CL:0000576	50.17	silver quality
islet of Langerhans	UBERON:0000006	49.30	gold quality
prostate gland	UBERON:0002367	49.29	silver quality
multicellular organism	UBERON:0000468	48.90	gold quality
blood	UBERON:0000178	48.81	silver quality
body of stomach	UBERON:0001161	48.79	gold quality
cerebral cortex	UBERON:0000956	48.37	gold quality
kidney	UBERON:0002113	48.07	gold quality
Brodmann (1909) area 9	UBERON:0013540	47.96	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	47.78	gold quality
anterior cingulate cortex	UBERON:0009835	46.84	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	46.68	gold quality
heart	UBERON:0000948	46.60	gold quality
gastrocnemius	UBERON:0001388	46.53	silver quality
adult mammalian kidney	UBERON:0000082	46.36	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.00

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.