B4GALT4-AS1

Summary

B4GALT4-AS1 (B4GALT4 antisense RNA 1, HGNC:40090) is a long non-coding RNA gene on chromosome 3q13.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40090
Approved symbol	B4GALT4-AS1
Name	B4GALT4 antisense RNA 1
Location	3q13.32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000240254
Ensembl biotype	lncRNA
Entrez	100874201
RNAcentral	URS000047F9A2 — lncRNA, 544 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000470790, ENST00000657819

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000470790 — 4 exons

Exon	Start	End
ENSE00001875524	119290641	119290666
ENSE00001876752	119235032	119235140
ENSE00001941075	119230145	119230357
ENSE00001948983	119226486	119226681

Expression profiles

Bgee: expression breadth ubiquitous, 110 present calls, max score 95.48.

Top tissues by expression

114 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	95.48	gold quality
bone marrow cell	CL:0002092	74.55	gold quality
skeletal muscle tissue	UBERON:0001134	69.96	silver quality
quadriceps femoris	UBERON:0001377	69.42	gold quality
cerebellar vermis	UBERON:0004720	67.75	gold quality
left testis	UBERON:0004533	67.19	gold quality
thymus	UBERON:0002370	67.01	silver quality
testis	UBERON:0000473	66.75	gold quality
right testis	UBERON:0004534	66.41	gold quality
bone marrow	UBERON:0002371	65.61	gold quality
monocyte	CL:0000576	59.39	gold quality
islet of Langerhans	UBERON:0000006	57.87	gold quality
gall bladder	UBERON:0002110	57.81	gold quality
blood	UBERON:0000178	56.72	gold quality
stromal cell of endometrium	CL:0002255	56.08	gold quality
tonsil	UBERON:0002372	55.08	gold quality
calcaneal tendon	UBERON:0003701	54.50	gold quality
lymph node	UBERON:0000029	54.19	gold quality
endometrium	UBERON:0001295	54.17	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	54.14	gold quality
kidney	UBERON:0002113	53.69	gold quality
liver	UBERON:0002107	53.27	silver quality
prefrontal cortex	UBERON:0000451	52.58	gold quality
adrenal tissue	UBERON:0018303	52.52	gold quality
rectum	UBERON:0001052	52.22	gold quality
vermiform appendix	UBERON:0001154	52.11	gold quality
placenta	UBERON:0001987	51.71	gold quality
muscle of leg	UBERON:0001383	51.58	gold quality
corpus callosum	UBERON:0002336	51.39	gold quality
smooth muscle tissue	UBERON:0001135	50.78	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.04

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.