B4GAT1-DT

Summary

B4GAT1-DT (B4GAT1 divergent transcript, HGNC:56070) is a long non-coding RNA gene on chromosome 11q13.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56070
Approved symbol	B4GAT1-DT
Name	B4GAT1 divergent transcript
Location	11q13.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000255468
Ensembl biotype	lncRNA
Entrez	102724064
RNAcentral	URS0000A765B6 — lncRNA, 576 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000531602, ENST00000580881, ENST00000581155, ENST00000649789, ENST00000745372, ENST00000745373

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000531602 — 2 exons

Exon	Start	End
ENSE00002151815	66363269	66363760
ENSE00002192239	66347950	66348070

Expression profiles

Bgee: expression breadth ubiquitous, 135 present calls, max score 92.18.

Top tissues by expression

138 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
duodenum	UBERON:0002114	92.18	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.02	gold quality
thymus	UBERON:0002370	87.79	silver quality
body of stomach	UBERON:0001161	86.73	gold quality
stomach	UBERON:0000945	86.29	gold quality
body of pancreas	UBERON:0001150	86.11	gold quality
mucosa of transverse colon	UBERON:0004991	83.85	gold quality
fundus of stomach	UBERON:0001160	82.45	gold quality
pancreas	UBERON:0001264	82.41	gold quality
liver	UBERON:0002107	82.30	gold quality
right lobe of liver	UBERON:0001114	82.19	gold quality
small intestine	UBERON:0002108	80.10	gold quality
small intestine Peyer’s patch	UBERON:0003454	79.37	gold quality
right lung	UBERON:0002167	78.69	gold quality
rectum	UBERON:0001052	78.67	gold quality
transverse colon	UBERON:0001157	78.45	gold quality
pituitary gland	UBERON:0000007	77.61	gold quality
right hemisphere of cerebellum	UBERON:0014890	77.48	gold quality
cerebellar hemisphere	UBERON:0002245	77.10	gold quality
cerebellum	UBERON:0002037	77.03	gold quality
cerebellar cortex	UBERON:0002129	77.03	gold quality
apex of heart	UBERON:0002098	76.43	gold quality
adenohypophysis	UBERON:0002196	76.15	gold quality
islet of Langerhans	UBERON:0000006	75.99	gold quality
cerebellar vermis	UBERON:0004720	75.90	gold quality
cortical plate	UBERON:0005343	75.51	gold quality
right atrium auricular region	UBERON:0006631	75.48	gold quality
skeletal muscle tissue	UBERON:0001134	75.38	gold quality
intestine	UBERON:0000160	75.35	gold quality
colonic epithelium	UBERON:0000397	74.69	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	6.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.