BACH1-IT3

Summary

BACH1-IT3 (BACH1 intronic transcript 3, HGNC:16455) is a long non-coding RNA gene on chromosome 21q21.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:16455
Approved symbol	BACH1-IT3
Name	BACH1 intronic transcript 3
Location	21q21.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000234293
Ensembl biotype	lncRNA
Entrez	54147
RNAcentral	URS0000BC4650 — lncRNA, 415 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000429843

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000429843 — 2 exons

Exon	Start	End
ENSE00001637321	29496047	29496238
ENSE00001669398	29500173	29500386

Expression profiles

Bgee: expression breadth broad, 85 present calls, max score 72.73.

Top tissues by expression

85 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	72.73	gold quality
skeletal muscle tissue	UBERON:0001134	70.55	gold quality
colonic epithelium	UBERON:0000397	70.06	gold quality
bone marrow	UBERON:0002371	69.88	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	67.96	gold quality
tonsil	UBERON:0002372	66.06	gold quality
urinary bladder	UBERON:0001255	62.45	silver quality
monocyte	CL:0000576	61.82	gold quality
hindlimb stylopod muscle	UBERON:0004252	61.77	gold quality
blood	UBERON:0000178	61.61	gold quality
liver	UBERON:0002107	61.21	gold quality
kidney	UBERON:0002113	60.69	gold quality
prefrontal cortex	UBERON:0000451	59.52	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	56.78	gold quality
adrenal tissue	UBERON:0018303	56.38	gold quality
placenta	UBERON:0001987	55.81	gold quality
corpus callosum	UBERON:0002336	55.55	gold quality
uterine cervix	UBERON:0000002	54.23	gold quality
gastrocnemius	UBERON:0001388	53.81	gold quality
adrenal gland	UBERON:0002369	52.35	gold quality
stomach	UBERON:0000945	52.00	gold quality
calcaneal tendon	UBERON:0003701	51.88	silver quality
ectocervix	UBERON:0012249	51.87	gold quality
heart	UBERON:0000948	50.60	gold quality
adult mammalian kidney	UBERON:0000082	50.43	silver quality
multicellular organism	UBERON:0000468	49.47	gold quality
pancreas	UBERON:0001264	48.65	silver quality
left coronary artery	UBERON:0001626	48.33	gold quality
smooth muscle tissue	UBERON:0001135	47.94	gold quality
intestine	UBERON:0000160	47.57	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.