BAIAP2-DT

Summary

BAIAP2-DT (BAIAP2 divergent transcript, HGNC:44342) is a long non-coding RNA gene on chromosome 17q25.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:44342
Approved symbol	BAIAP2-DT
Name	BAIAP2 divergent transcript
Location	17q25.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	lnc-BAIAP2
Ensembl gene	ENSG00000226137
Ensembl biotype	lncRNA
Entrez	440465
RNAcentral	URS000075BF56 — lncRNA, 4421 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000573167, ENST00000577066, ENST00000717219

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000573167 — 2 exons

Exon	Start	End
ENSE00002677116	81029702	81033398
ENSE00002679769	81034565	81034881

Expression profiles

Bgee: expression breadth ubiquitous, 224 present calls, max score 95.89.

FANTOM5 (CAGE): breadth broad, TPM avg 1.4397 / max 52.3502, expressed in 677 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
168647	0.5877	316
168645	0.4818	170
168646	0.3702	178

Top tissues by expression

239 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
endothelial cell	CL:0000115	95.89	gold quality
cortical plate	UBERON:0005343	95.18	gold quality
middle temporal gyrus	UBERON:0002771	90.10	gold quality
tendon of biceps brachii	UBERON:0008188	89.70	gold quality
Brodmann (1909) area 23	UBERON:0013554	89.31	gold quality
ganglionic eminence	UBERON:0004023	88.50	gold quality
nucleus accumbens	UBERON:0001882	88.26	gold quality
putamen	UBERON:0001874	87.58	gold quality
anterior cingulate cortex	UBERON:0009835	87.19	gold quality
caudate nucleus	UBERON:0001873	87.17	gold quality
right frontal lobe	UBERON:0002810	87.13	gold quality
prefrontal cortex	UBERON:0000451	86.97	gold quality
neocortex	UBERON:0001950	86.69	gold quality
lateral globus pallidus	UBERON:0002476	86.69	gold quality
frontal cortex	UBERON:0001870	86.52	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	86.49	gold quality
cerebral cortex	UBERON:0000956	85.94	gold quality
Brodmann (1909) area 46	UBERON:0006483	85.77	gold quality
entorhinal cortex	UBERON:0002728	85.66	gold quality
primary visual cortex	UBERON:0002436	84.96	gold quality
monocyte	CL:0000576	84.92	gold quality
forebrain	UBERON:0001890	84.87	gold quality
Brodmann (1909) area 9	UBERON:0013540	84.63	gold quality
leukocyte	CL:0000738	84.52	gold quality
temporal lobe	UBERON:0001871	84.48	gold quality
superior frontal gyrus	UBERON:0002661	83.96	gold quality
amygdala	UBERON:0001876	83.86	gold quality
occipital lobe	UBERON:0002021	83.61	gold quality
brain	UBERON:0000955	83.46	gold quality
Ammon’s horn	UBERON:0001954	82.60	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	9.81

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.