BAZ1A-AS1

Summary

BAZ1A-AS1 (BAZ1A antisense RNA 1, HGNC:55440) is a long non-coding RNA gene on chromosome 14q13.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55440
Approved symbol	BAZ1A-AS1
Name	BAZ1A antisense RNA 1
Location	14q13.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258738
Ensembl biotype	lncRNA
Entrez	112268124
RNAcentral	URS0000E60AD1 — lncRNA, 2273 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000557373

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000557373 — 1 exons

Exon	Start	End
ENSE00002533187	34874343	34876459

Expression profiles

Bgee: expression breadth ubiquitous, 129 present calls, max score 84.86.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 6.1678 / max 457.1229, expressed in 1526 samples.

FANTOM5 promoters (6 alternative TSS)

Promoter ID	TPM avg	Samples expressed
139183	3.0134	853
139184	2.5379	1061
139185	0.4564	108
139188	0.0759	34
139187	0.0599	25
139186	0.0242	8

Top tissues by expression

129 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	84.86	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.89	gold quality
bone marrow	UBERON:0002371	78.18	gold quality
monocyte	CL:0000576	78.00	gold quality
leukocyte	CL:0000738	77.71	gold quality
ventricular zone	UBERON:0003053	76.48	gold quality
bone marrow cell	CL:0002092	75.76	gold quality
granulocyte	CL:0000094	74.50	gold quality
ganglionic eminence	UBERON:0004023	74.09	gold quality
blood	UBERON:0000178	73.51	gold quality
left testis	UBERON:0004533	71.67	gold quality
testis	UBERON:0000473	71.43	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	71.43	gold quality
stromal cell of endometrium	CL:0002255	71.35	gold quality
right testis	UBERON:0004534	70.98	gold quality
endometrium	UBERON:0001295	69.57	gold quality
lymph node	UBERON:0000029	68.40	gold quality
tonsil	UBERON:0002372	68.27	gold quality
rectum	UBERON:0001052	67.81	gold quality
vermiform appendix	UBERON:0001154	67.69	gold quality
tibial artery	UBERON:0007610	67.68	gold quality
popliteal artery	UBERON:0002250	67.67	gold quality
subcutaneous adipose tissue	UBERON:0002190	66.68	gold quality
placenta	UBERON:0001987	66.51	gold quality
descending thoracic aorta	UBERON:0002345	66.51	gold quality
smooth muscle tissue	UBERON:0001135	66.42	gold quality
muscle tissue	UBERON:0002385	66.41	gold quality
adipose tissue	UBERON:0001013	66.13	gold quality
urinary bladder	UBERON:0001255	66.01	gold quality
thoracic aorta	UBERON:0001515	66.01	gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-MTAB-9543	yes	14.52
E-ANND-3	no	2.43

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.