BCAS1-AS1

Summary

BCAS1-AS1 (BCAS1 antisense RNA 1, HGNC:40094) is a long non-coding RNA gene on chromosome 20q13.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40094
Approved symbol	BCAS1-AS1
Name	BCAS1 antisense RNA 1
Location	20q13.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236352
Ensembl biotype	lncRNA
Entrez	124904936
RNAcentral	URS000040E9A5 — lncRNA, 884 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000450473, ENST00000834796, ENST00000834797, ENST00000834798, ENST00000834799, ENST00000834800, ENST00000834801, ENST00000834802

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000450473 — 3 exons

Exon	Start	End
ENSE00001596558	53942175	53942508
ENSE00001662348	53940160	53940598
ENSE00001752303	53941285	53941395

Expression profiles

Bgee: expression breadth ubiquitous, 106 present calls, max score 64.56.

Top tissues by expression

106 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
hindlimb stylopod muscle	UBERON:0004252	64.56	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	63.04	gold quality
ventricular zone	UBERON:0003053	61.76	gold quality
ganglionic eminence	UBERON:0004023	61.31	gold quality
substantia nigra	UBERON:0002038	60.90	gold quality
amygdala	UBERON:0001876	60.63	gold quality
corpus callosum	UBERON:0002336	59.77	gold quality
cortical plate	UBERON:0005343	59.27	gold quality
Ammon’s horn	UBERON:0001954	58.70	gold quality
muscle tissue	UBERON:0002385	58.42	gold quality
monocyte	CL:0000576	58.25	gold quality
putamen	UBERON:0001874	57.81	gold quality
prefrontal cortex	UBERON:0000451	57.63	gold quality
tonsil	UBERON:0002372	56.96	gold quality
skeletal muscle tissue	UBERON:0001134	56.75	gold quality
hypothalamus	UBERON:0001898	56.22	gold quality
blood	UBERON:0000178	55.29	gold quality
nucleus accumbens	UBERON:0001882	55.27	gold quality
caudate nucleus	UBERON:0001873	55.07	gold quality
bone marrow	UBERON:0002371	54.85	gold quality
muscle of leg	UBERON:0001383	54.66	gold quality
brain	UBERON:0000955	54.56	gold quality
primary visual cortex	UBERON:0002436	54.37	gold quality
lymph node	UBERON:0000029	54.16	gold quality
cerebral cortex	UBERON:0000956	53.78	gold quality
gastrocnemius	UBERON:0001388	53.72	gold quality
frontal cortex	UBERON:0001870	53.65	gold quality
anterior cingulate cortex	UBERON:0009835	53.20	gold quality
adult mammalian kidney	UBERON:0000082	53.09	gold quality
kidney	UBERON:0002113	52.36	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.04

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.