BCAS3-AS1

Summary

BCAS3-AS1 (BCAS3 antisense RNA 1, HGNC:56376) is a long non-coding RNA gene on chromosome 17q23.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56376
Approved symbol	BCAS3-AS1
Name	BCAS3 antisense RNA 1
Location	17q23.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC005884.1
Ensembl gene	ENSG00000267207
Ensembl biotype	lncRNA
Entrez	107984992
RNAcentral	URS00026A21FB — lncRNA, 742 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 13 — 13 lncRNA

ENST00000588604, ENST00000666957, ENST00000717192, ENST00000821413, ENST00000821414, ENST00000821415, ENST00000821416, ENST00000821417, ENST00000821418, ENST00000821419, ENST00000821420, ENST00000821421, ENST00000821422

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000588604 — 4 exons

Exon	Start	End
ENSE00002794503	61070005	61070123
ENSE00002846612	61036213	61036384
ENSE00004228190	61034511	61034774
ENSE00004228198	61135867	61136044

Expression profiles

Bgee: expression breadth ubiquitous, 121 present calls, max score 86.14.

Top tissues by expression

121 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.14	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	77.39	gold quality
colonic epithelium	UBERON:0000397	75.32	gold quality
ganglionic eminence	UBERON:0004023	70.34	gold quality
gall bladder	UBERON:0002110	69.29	gold quality
right coronary artery	UBERON:0001625	67.98	gold quality
left coronary artery	UBERON:0001626	65.93	gold quality
right lung	UBERON:0002167	65.39	gold quality
placenta	UBERON:0001987	64.54	gold quality
tonsil	UBERON:0002372	63.85	silver quality
upper lobe of left lung	UBERON:0008952	63.42	gold quality
lung	UBERON:0002048	63.40	gold quality
skeletal muscle tissue	UBERON:0001134	62.73	gold quality
prefrontal cortex	UBERON:0000451	62.39	gold quality
metanephros cortex	UBERON:0010533	62.02	gold quality
popliteal artery	UBERON:0002250	61.53	gold quality
tibial artery	UBERON:0007610	61.53	gold quality
apex of heart	UBERON:0002098	61.28	gold quality
lymph node	UBERON:0000029	61.21	gold quality
hindlimb stylopod muscle	UBERON:0004252	61.18	gold quality
monocyte	CL:0000576	61.01	gold quality
bone marrow	UBERON:0002371	60.50	gold quality
heart left ventricle	UBERON:0002084	59.73	gold quality
cortex of kidney	UBERON:0001225	59.11	gold quality
calcaneal tendon	UBERON:0003701	58.99	gold quality
corpus callosum	UBERON:0002336	58.82	gold quality
heart	UBERON:0000948	58.73	gold quality
nucleus accumbens	UBERON:0001882	58.39	gold quality
muscle of leg	UBERON:0001383	58.27	gold quality
kidney	UBERON:0002113	58.10	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.74

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.