BCDIN3D-AS1

Summary

BCDIN3D-AS1 (BCDIN3D antisense RNA 1, HGNC:44113) is a long non-coding RNA gene on chromosome 12q13.12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:44113
Approved symbol	BCDIN3D-AS1
Name	BCDIN3D antisense RNA 1
Location	12q13.12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258057
Ensembl biotype	lncRNA
Entrez	100286844
RNAcentral	URS000075C38C — lncRNA, 3109 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 10 lncRNA

ENST00000548872, ENST00000549124, ENST00000551146, ENST00000653240, ENST00000670504, ENST00000818894, ENST00000818895, ENST00000818896, ENST00000818897, ENST00000818898

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000548872 — 3 exons

Exon	Start	End
ENSE00002369110	49828542	49828748
ENSE00002369572	49828935	49829083
ENSE00002398460	49838422	49841143

Expression profiles

Bgee: expression breadth ubiquitous, 161 present calls, max score 85.30.

FANTOM5 (CAGE): breadth broad, TPM avg 0.6260 / max 17.4796, expressed in 304 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
125376	0.6260	304

Top tissues by expression

248 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
pancreatic ductal cell	CL:0002079	85.30	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	82.41	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.61	gold quality
buccal mucosa cell	CL:0002336	73.96	silver quality
cortical plate	UBERON:0005343	72.76	gold quality
prefrontal cortex	UBERON:0000451	72.64	gold quality
islet of Langerhans	UBERON:0000006	72.08	gold quality
colonic epithelium	UBERON:0000397	69.84	silver quality
ventricular zone	UBERON:0003053	68.23	gold quality
muscle of leg	UBERON:0001383	67.82	gold quality
gastrocnemius	UBERON:0001388	67.79	gold quality
stromal cell of endometrium	CL:0002255	67.75	gold quality
bone marrow cell	CL:0002092	67.48	silver quality
hindlimb stylopod muscle	UBERON:0004252	67.10	gold quality
ganglionic eminence	UBERON:0004023	67.06	gold quality
right atrium auricular region	UBERON:0006631	67.04	gold quality
frontal cortex	UBERON:0001870	66.88	gold quality
nucleus accumbens	UBERON:0001882	66.88	gold quality
sural nerve	UBERON:0015488	66.88	gold quality
anterior cingulate cortex	UBERON:0009835	66.80	gold quality
Brodmann (1909) area 9	UBERON:0013540	66.80	gold quality
neocortex	UBERON:0001950	66.56	gold quality
heart left ventricle	UBERON:0002084	66.51	gold quality
cardiac atrium	UBERON:0002081	66.27	gold quality
caudate nucleus	UBERON:0001873	66.24	gold quality
putamen	UBERON:0001874	66.18	gold quality
right frontal lobe	UBERON:0002810	66.18	gold quality
cardiac ventricle	UBERON:0002082	65.96	gold quality
pancreas	UBERON:0001264	65.81	gold quality
heart	UBERON:0000948	65.62	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.00

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.