BCHE
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Also known as E1
Summary
BCHE (butyrylcholinesterase, HGNC:983) is a protein-coding gene on chromosome 3q26.1, encoding Cholinesterase (P06276). Esterase with broad substrate specificity.
This gene encodes a cholinesterase enzyme and member of the type-B carboxylesterase/lipase family of proteins. The encoded enzyme exhibits broad substrate specificity and is involved in the detoxification of poisons including organophosphate nerve agents and pesticides, and the metabolism of drugs including cocaine, heroin and aspirin. Humans homozygous for certain mutations in this gene exhibit prolonged apnea after administration of the muscle relaxant succinylcholine.
Source: NCBI Gene 590 — RefSeq curated summary.
At a glance
- Gene–disease (curated): butyrylcholinesterase deficiency (Definitive, GenCC)
- GWAS associations: 11
- Clinical variants (ClinVar): 237 total — 14 pathogenic, 41 likely-pathogenic
- Phenotypes (HPO): 11
- Druggable target: yes — 36 molecules with ChEMBL bioactivity
- Dosage sensitivity (ClinGen): haploinsufficiency autosomal recessive, triplosensitivity unscored
- MANE Select transcript:
NM_000055
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:983 |
| Approved symbol | BCHE |
| Name | butyrylcholinesterase |
| Location | 3q26.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | E1 |
| Ensembl gene | ENSG00000114200 |
| Ensembl biotype | protein_coding |
| OMIM | 177400 |
| Entrez | 590 |
Gene structure
Transcript identifiers
Ensembl transcripts: 9 — 7 protein_coding, 2 nonsense_mediated_decay
ENST00000264381, ENST00000479451, ENST00000482958, ENST00000488954, ENST00000497011, ENST00000855336, ENST00000855337, ENST00000855338, ENST00000855339
RefSeq mRNA: 1 — MANE Select: NM_000055
NM_000055
CCDS: CCDS3198
Canonical transcript exons
ENST00000264381 — 4 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000826111 | 165829517 | 165831041 |
| ENSE00001810445 | 165772904 | 165773506 |
| ENSE00001954521 | 165837314 | 165837423 |
| ENSE00003548240 | 165786145 | 165786311 |
Expression profiles
Bgee: expression breadth ubiquitous, 237 present calls, max score 98.86.
FANTOM5 (CAGE): breadth broad, TPM avg 8.2962 / max 792.0520, expressed in 838 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 45441 | 8.0160 | 833 |
| 45440 | 0.2802 | 122 |
Top tissues by expression
287 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| parietal pleura | UBERON:0002400 | 98.86 | gold quality |
| adrenal tissue | UBERON:0018303 | 97.73 | gold quality |
| right lobe of liver | UBERON:0001114 | 96.05 | gold quality |
| germinal epithelium of ovary | UBERON:0001304 | 95.93 | gold quality |
| liver | UBERON:0002107 | 94.92 | gold quality |
| left uterine tube | UBERON:0001303 | 94.69 | gold quality |
| pleura | UBERON:0000977 | 94.37 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 92.41 | gold quality |
| lower esophagus | UBERON:0013473 | 92.34 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 90.98 | gold quality |
| pericardium | UBERON:0002407 | 90.22 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 90.22 | gold quality |
| seminal vesicle | UBERON:0000998 | 89.57 | gold quality |
| visceral pleura | UBERON:0002401 | 88.18 | gold quality |
| ventricular zone | UBERON:0003053 | 87.63 | gold quality |
| omental fat pad | UBERON:0010414 | 86.91 | gold quality |
| peritoneum | UBERON:0002358 | 86.89 | gold quality |
| body of uterus | UBERON:0009853 | 85.83 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 85.67 | gold quality |
| sigmoid colon | UBERON:0001159 | 84.79 | gold quality |
| rectum | UBERON:0001052 | 84.72 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 84.46 | gold quality |
| endocervix | UBERON:0000458 | 83.12 | gold quality |
| amygdala | UBERON:0001876 | 82.87 | gold quality |
| corpus epididymis | UBERON:0004359 | 82.07 | gold quality |
| vena cava | UBERON:0004087 | 81.73 | gold quality |
| ganglionic eminence | UBERON:0004023 | 81.31 | gold quality |
| skin of hip | UBERON:0001554 | 81.14 | gold quality |
| myometrium | UBERON:0001296 | 80.68 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 80.63 | gold quality |
Single-cell (SCXA)
Detected in 8 experiment(s), a significant marker in 7.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-81608 | yes | 300.40 |
| E-ENAD-27 | yes | 267.45 |
| E-MTAB-5061 | yes | 192.98 |
| E-MTAB-10553 | yes | 33.26 |
| E-ANND-3 | yes | 10.62 |
| E-GEOD-93593 | yes | 4.85 |
| E-GEOD-81547 | yes | 4.73 |
| E-GEOD-83139 | no | 3.08 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): ZNF354C
miRNA regulators (miRDB)
43 targeting BCHE, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-5696 | 99.98 | 72.36 | 4487 |
| HSA-MIR-651-3P | 99.94 | 73.48 | 5177 |
| HSA-MIR-4760-3P | 99.93 | 70.50 | 2385 |
| HSA-MIR-218-5P | 99.93 | 72.22 | 2103 |
| HSA-MIR-153-5P | 99.89 | 73.86 | 6317 |
| HSA-MIR-4496 | 99.88 | 68.89 | 2236 |
| HSA-MIR-5582-3P | 99.86 | 72.48 | 4221 |
| HSA-MIR-221-3P | 99.86 | 71.56 | 1329 |
| HSA-MIR-222-3P | 99.86 | 71.35 | 1337 |
| HSA-MIR-4517 | 99.76 | 69.19 | 1867 |
| HSA-MIR-8084 | 99.73 | 69.57 | 1760 |
| HSA-MIR-1287-3P | 99.63 | 66.93 | 492 |
| HSA-MIR-4261 | 99.59 | 70.30 | 3415 |
| HSA-MIR-203A-3P | 99.49 | 70.56 | 2806 |
| HSA-MIR-147B-5P | 99.45 | 70.62 | 2432 |
| HSA-MIR-889-3P | 99.40 | 69.76 | 2103 |
| HSA-MIR-6839-3P | 99.39 | 68.86 | 1301 |
| HSA-MIR-16-2-3P | 99.29 | 70.60 | 1954 |
| HSA-MIR-195-3P | 99.29 | 70.61 | 1954 |
| HSA-MIR-5690 | 99.25 | 67.58 | 1012 |
| HSA-MIR-4477B | 99.23 | 70.49 | 1733 |
| HSA-MIR-664A-3P | 99.22 | 71.08 | 2696 |
| HSA-MIR-7109-5P | 99.18 | 66.13 | 1057 |
| HSA-MIR-5583-3P | 99.06 | 65.68 | 1018 |
| HSA-MIR-6737-3P | 98.95 | 68.56 | 1577 |
| HSA-MIR-7157-3P | 98.95 | 68.70 | 1582 |
| HSA-MIR-3146 | 98.85 | 66.77 | 601 |
| HSA-MIR-3145-3P | 98.85 | 69.07 | 2031 |
| HSA-MIR-4477A | 98.83 | 69.75 | 2952 |
| HSA-MIR-1183 | 98.75 | 67.10 | 1116 |
Functional genomics
ClinGen dosage: haploinsufficiency 30 (autosomal recessive), triplosensitivity Not yet evaluated (unscored). ClinGen Gene Dosage Map
Literature-anchored findings (GeneRIF, showing 40)
- Mutations associated with prolonged neuromuscular block during anesthesia. (PMID:11749053)
- Butyrylcholinesterase K variant on chromosome 3 q is associated with Type II diabetes in white Caucasian subjects. (PMID:11793025)
- can hydrolyze acetylcholine in the normal and Alzheimer brain. (PMID:11848688)
- Engineering of a monomeric and low-glycosylated form (PMID:11856322)
- Human butyrylcholinesterase is reversibly inhibited by tetraethylammonium ion. (PMID:11856351)
- serum enzyme inhibited by antidepressants, fluoxetine, sertraline and amitriptyline, in a dose related manner (PMID:12009429)
- BuChE-catalyzed hydrolysis of N-methylindoxyl acetate: analysis of volume changes upon reaction and hysteretic behavior. Hydrolysis by wild-type BuChE and peripheral site mutants (D70G, Y332A, D70G/Y332A) was found to follow Michaelis-Menten kinetics. (PMID:12044901)
- There is a minor association between BChE-K and early-onset coronary artery disease, especially in the presence of the APOE-epsilon 4 allele (PMID:12074828)
- Wild-type and A328W mutant expressed in Chinese hamster ovary cells have a 16-hour half-life in the circulation and protect mice from cocaine toxicity. (PMID:12130740)
- Novel mutation and multiple mutations found in the human butyrylcholinesterase gene affect enzyme activity. (PMID:12417112)
- Butyrylcholinesterase is a major regulator of attention especially in cholinergic deficiency states through its ability to hydrolyse acetylcholine. (PMID:12668920)
- Data help to better define the etiology of low BChE activity and the role of the rather common K allele (PMID:12724618)
- The distinct distribution of BuChE activity in neurons in the human thalamus is consistent with an important role for this enzyme in neurotransmission in the human nervous system. (PMID:12811800)
- the structure of BChE is similar to a previously published theoretical model of this enzyme and to the structure of Torpedo acetylcholinesterase (PMID:12869558)
- replacement of Ala277(Trp279) with Trp in human BChE does not affect the binding of E2020 to BChE (PMID:14622273)
- Theoretical analysis of the oscillatory behaviour of the approach to the steady-state for BuChE led us to propose a model for the hysteresis of BuChE with Benzoylcholine. (PMID:14686935)
- analysis of global dynamics of human butyrylcholinesterase in solvents (PMID:15111428)
- BCHE K polymorphism is associated with Type 2 diabetes or with estimates of pancreatic beta cell function in large-scale Danish Caucasian populations. (PMID:15258737)
- This study reports the first data on the relation of BCHE alleles to anthropometric characters. (PMID:15386241)
- Both bambuterol and terbutaline inhibit BChE, but their affinities differ in human serum BChE variants. (PMID:15449725)
- When genetically transferred into rats, accelerated cocaine metabolism. (PMID:15465921)
- BChE-K variant and ApoE-epsilon 4 alleles act synergistically to increase the risk of late-onset Alzheimer’s disease, particularly in age group <75 years in Tehran, Iran. (PMID:15519745)
- compareison of theoretical results with those from previous work on mouse acetylcholinesterase and discussion of their implications for substrate binding and catalysis in BuChE. (PMID:15696543)
- four new mutations, found in the exon 2 of the BCHE gene, in a sample from 3001 Brazilian blood donors.A table with the 58 non-usual variants of butyrylcholinesterase is also presented (PMID:15781196)
- BuChE may play role in the phosphorylation of tau in Alzheimer disease (PMID:15802910)
- The results suggest the involvement of BuChE in the pathophysiological process constituting the metabolic syndrome. (PMID:15907830)
- Human plasma contains four esterases: butyrylcholinesterase, paraoxonase, acetylcholinesterase, and albumin. (PMID:16213467)
- failure to observe increased [(11)C]BMP hydrolysis in vivo makes it less likely that incremental BuChE contributes importantly to acetylcholine hydrolysis in Alzheimer disease (PMID:16278840)
- Effects of the oxyanion hole on the energy barriers provide valuable clues on how to rationally design BChE mutants with a higher catalytic activity for the hydrolysis of cocaine. (PMID:16288482)
- pharmacokinetics of BuChE were evaluated in guinea pigs and in cynomolgus monkeys (PMID:16289064)
- K allele of butyrylcholinesterase in diabetes mellitus, Type 2 may predispose to a higher risk of metabolic syndrome (PMID:16429499)
- The hydrolysis of anilides and esters of choline appears to utilize the same catalytic site in BuChE. (PMID:16504521)
- In Alzheimer’s disease, BChE may have thus acquired an inverse role to that of AChE by adopting imperfect amphipathic characteristics of its C terminus (PMID:16731619)
- These findings suggest that the Polyethyleneglycol conjugated (PEGylated) recombinant human acetylcholinesterase exhibits unaltered biodistribution and high bioavailability. (PMID:16801396)
- Down-regulation of butyrylcholinesterase is associated with colorectal carcinoma (PMID:16909200)
- H(2)O(2) is a major player in the regulation of the cholinergic signal via both acetylcholinesterase and BchE and this signal is severely affected in the epidermis of patients with active vitiligo (PMID:16962996)
- We hypothesize that CSF BuChE varies inversely with BuChE in cortical amyloid plaques. Thus, low BuChE in a patient’s CSF may predict extensive incorporation in neuritic plaques, increased neurotoxicity and greater central neurodegeneration. (PMID:16973370)
- Levels are decreased in colonic adenocarcinomas. (PMID:17192624)
- the 1615G –> A polymorphism BCHE genotype was independently associated with in-stent restenosis in a Japanese population (PMID:17275003)
- Different profiles of cognitive test performance between individuals with silent and wild-type BuChE are observed and suggest a function for BuChE in cognition. (PMID:17318303)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Bche | ENSMUSG00000027792 |
| rattus_norvegicus | Bche | ENSRNOG00000009826 |
| drosophila_melanogaster | Ace | FBGN0000024 |
| caenorhabditis_elegans | ace-2 | WBGENE00000036 |
Paralogs (13): TG (ENSG00000042832), ACHE (ENSG00000087085), NLGN4X (ENSG00000146938), CES5A (ENSG00000159398), NLGN4Y (ENSG00000165246), NLGN1 (ENSG00000169760), NLGN2 (ENSG00000169992), CEL (ENSG00000170835), CES4A (ENSG00000172824), CES3 (ENSG00000172828), CES2 (ENSG00000172831), NLGN3 (ENSG00000196338), CES1 (ENSG00000198848)
Protein
Protein identifiers
Cholinesterase — P06276 (reviewed: P06276)
Alternative names: Acylcholine acylhydrolase, Butyrylcholine esterase, Choline esterase II, Pseudocholinesterase
All UniProt accessions (5): P06276, F8WEX7, F8WF14, H0Y885, H7C4Y0
UniProt curated annotations — full annotation on UniProt →
Function. Esterase with broad substrate specificity. Contributes to the inactivation of the neurotransmitter acetylcholine. Can degrade neurotoxic organophosphate esters.
Subunit / interactions. Homotetramer; disulfide-linked. Dimer of dimers.
Subcellular location. Secreted.
Tissue specificity. Detected in blood plasma (at protein level). Present in most cells except erythrocytes.
Post-translational modifications. N-glycosylated. No other PTM detected. The major N-glycan structures are of the complex diantennary type with 1 and 2 N-acetylneuraminic acid molecules (Neu5Ac) making up approximately 33% and 47% of the total N-glycans, respectively. Only low amounts of fucosylated diantennary N-glycans are detected (approximately 2%). Triantennary N-glycans with or without fucose amount to approximately 13%, whereas 5% of the total N-glycans are of the oligomannosidic or hybrid type.
Disease relevance. Butyrylcholinesterase deficiency (BCHED) [MIM:617936] An autosomal recessive metabolic condition characterized by increased sensitivity to certain anesthetic drugs, including the muscle relaxants succinylcholine or mivacurium. BCHED results in slower hydrolysis of these drugs and, consequently, a prolonged neuromuscular block, leading to apnea. The duration of the prolonged apnea varies significantly depending on the extent of the enzyme deficiency. The disease is caused by variants affecting the gene represented in this entry.
Activity regulation. Inhibited by mercury. Inhibited by Tabun. Tabun forms a covalent adduct with Ser-226 that becomes irreversible upon aging.
Similarity. Belongs to the type-B carboxylesterase/lipase family.
RefSeq proteins (1): NP_000046* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000997 | Cholinesterase | Family |
| IPR002018 | CarbesteraseB | Domain |
| IPR014788 | AChE_tetra | Domain |
| IPR019819 | Carboxylesterase_B_CS | Conserved_site |
| IPR019826 | Carboxylesterase_B_AS | Active_site |
| IPR029058 | AB_hydrolase_fold | Homologous_superfamily |
| IPR050654 | AChE-related_enzymes | Family |
Pfam: PF00135, PF08674
Enzyme classification (BRENDA):
- EC 3.1.1.8 — cholinesterase (BRENDA: 97 organisms, 292 substrates, 1528 inhibitors, 221 Km, 106 kcat entries)
Substrate kinetics (BRENDA)
37 substrates with measured Km, best-characterized 15. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| BUTYRYLTHIOCHOLINE | 0.0001–6 | 47 |
| ACETYLTHIOCHOLINE | 0.019–4.8 | 30 |
| PROPIONYLTHIOCHOLINE | 0.006–5.4 | 26 |
| BUTYRYLTHIOCHOLINE IODIDE | 0.03–3.9 | 17 |
| BUTANOYLTHIOCHOLINE | 0.0051–0.34 | 11 |
| BENZOYLCHOLINE | 0.003–0.047 | 10 |
| (-)-COCAINE | 0.0031–0.065 | 6 |
| BENZOYLTHIOCHOLINE | 0.0029–0.135 | 6 |
| ACETYLCHOLINE | 0.027–0.148 | 5 |
| 2-NITROPHENYL BUTYRATE | 0.12–1.9 | 4 |
| ACETYLTHIOCHOLINE IODIDE | 0.057–1.476 | 4 |
| BUTYRYLCHOLINE | 0.29–7.1 | 4 |
| N-METHYLINDOXYL ACETATE | 0.066–0.162 | 4 |
| SUCCINYLTHIOCHOLINE | 0.003–11 | 3 |
| ACETYLCHOLINE IODIDE | 0.08–0.14 | 2 |
Catalyzed reactions (Rhea), 1 shown:
- an acylcholine + H2O = a carboxylate + choline + H(+) (RHEA:21964)
UniProt features (122 total): sequence variant 44, helix 26, strand 21, glycosylation site 10, turn 8, disulfide bond 4, active site 3, binding site 3, signal peptide 1, chain 1, modified residue 1
Structure
Experimental structures (PDB)
109 structures, top 30 by resolution.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 6ZWI | X-RAY DIFFRACTION | 1.85 |
| 6QAA | X-RAY DIFFRACTION | 1.9 |
| 1P0I | X-RAY DIFFRACTION | 2 |
| 2WSL | X-RAY DIFFRACTION | 2 |
| 7AWG | X-RAY DIFFRACTION | 2 |
| 7QHD | X-RAY DIFFRACTION | 2.04 |
| 1XLW | X-RAY DIFFRACTION | 2.1 |
| 2WIJ | X-RAY DIFFRACTION | 2.1 |
| 2WIK | X-RAY DIFFRACTION | 2.1 |
| 2XMB | X-RAY DIFFRACTION | 2.1 |
| 2XQF | X-RAY DIFFRACTION | 2.1 |
| 3DJY | X-RAY DIFFRACTION | 2.1 |
| 4BDS | X-RAY DIFFRACTION | 2.1 |
| 5NN0 | X-RAY DIFFRACTION | 2.1 |
| 8QTX | X-RAY DIFFRACTION | 2.12 |
| 7QBR | X-RAY DIFFRACTION | 2.13 |
| 8AI7 | X-RAY DIFFRACTION | 2.13 |
| 2WIG | X-RAY DIFFRACTION | 2.15 |
| 9R3B | X-RAY DIFFRACTION | 2.15 |
| 9R9D | X-RAY DIFFRACTION | 2.16 |
| 9R9E | X-RAY DIFFRACTION | 2.18 |
| 1XLU | X-RAY DIFFRACTION | 2.2 |
| 7BO3 | X-RAY DIFFRACTION | 2.2 |
| 8QTW | X-RAY DIFFRACTION | 2.24 |
| 1XLV | X-RAY DIFFRACTION | 2.25 |
| 2WIF | X-RAY DIFFRACTION | 2.25 |
| 7AMZ | X-RAY DIFFRACTION | 2.25 |
| 1P0P | X-RAY DIFFRACTION | 2.3 |
| 2WID | X-RAY DIFFRACTION | 2.3 |
| 2XMD | X-RAY DIFFRACTION | 2.3 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P06276-F1 | 93.30 | 0.83 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (3): 226 (acyl-ester intermediate); 353 (charge relay system); 466 (charge relay system)
Ligand- & substrate-binding residues (3): 110; 144–145; 466
Post-translational modifications (1): 226
Disulfide bonds (4): 93–120, 280–291, 428–547, 599
Glycosylation sites (10): 85, 134, 269, 284, 369, 483, 509, 513, 514, 45
Function
Pathways and Gene Ontology
Reactome pathways
4 pathways
| ID | Pathway |
|---|---|
| R-HSA-112311 | Neurotransmitter clearance |
| R-HSA-1483191 | Synthesis of PC |
| R-HSA-422085 | Synthesis, secretion, and deacylation of Ghrelin |
| R-HSA-9749641 | Aspirin ADME |
MSigDB gene sets: 188 (showing top):
GOBP_RESPONSE_TO_NITROGEN_COMPOUND, RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP, GOBP_COGNITION, GOBP_BEHAVIOR, RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP, GOBP_RESPONSE_TO_CORTICOSTEROID, GOBP_REGULATION_OF_HORMONE_LEVELS, GOBP_NEUROGENESIS, MAHADEVAN_IMATINIB_RESISTANCE_DN, chr3q26, HERNANDEZ_MITOTIC_ARREST_BY_DOCETAXEL_1_UP, GOBP_CELL_CELL_SIGNALING, BROWNE_HCMV_INFECTION_48HR_DN, GOBP_PROTEIN_MATURATION, MCBRYAN_PUBERTAL_BREAST_4_5WK_DN
GO Biological Process (15): acetylcholine catabolic process (GO:0006581), xenobiotic metabolic process (GO:0006805), learning (GO:0007612), negative regulation of cell population proliferation (GO:0008285), neuroblast differentiation (GO:0014016), peptide hormone processing (GO:0016486), choline metabolic process (GO:0019695), response to alkaloid (GO:0043279), cocaine catabolic process (GO:0050784), negative regulation of synaptic transmission (GO:0050805), response to glucocorticoid (GO:0051384), response to folic acid (GO:0051593), response to nutrient (GO:0007584), response to xenobiotic stimulus (GO:0009410), obsolete cocaine metabolic process (GO:0050783)
GO Molecular Function (11): amyloid-beta binding (GO:0001540), catalytic activity (GO:0003824), acetylcholinesterase activity (GO:0003990), cholinesterase activity (GO:0004104), hydrolase activity, acting on ester bonds (GO:0016788), enzyme binding (GO:0019899), choline binding (GO:0033265), identical protein binding (GO:0042802), protein binding (GO:0005515), hydrolase activity (GO:0016787), carboxylic ester hydrolase activity (GO:0052689)
GO Cellular Component (7): extracellular region (GO:0005576), obsolete extracellular space (GO:0005615), nuclear envelope lumen (GO:0005641), endoplasmic reticulum lumen (GO:0005788), plasma membrane (GO:0005886), blood microparticle (GO:0072562), endoplasmic reticulum (GO:0005783)
Reactome top-level categories
Rollup of top-4 pathways:
| Category | Pathways |
|---|---|
| Transmission across Chemical Synapses | 1 |
| Glycerophospholipid biosynthesis | 1 |
| Peptide hormone metabolism | 1 |
| Drug ADME | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| metabolic process | 2 |
| response to nitrogen compound | 2 |
| response to chemical | 2 |
| protein binding | 2 |
| cellular anatomical structure | 2 |
| acetylcholine metabolic process | 1 |
| catabolic process | 1 |
| cellular response to xenobiotic stimulus | 1 |
| learning or memory | 1 |
| cell population proliferation | 1 |
| regulation of cell population proliferation | 1 |
| negative regulation of cellular process | 1 |
| cell differentiation | 1 |
| generation of neurons | 1 |
| hormone metabolic process | 1 |
| signaling receptor ligand precursor processing | 1 |
| alkaloid catabolic process | 1 |
| chemical synaptic transmission | 1 |
| negative regulation of cell communication | 1 |
| negative regulation of signaling | 1 |
| modulation of chemical synaptic transmission | 1 |
| response to corticosteroid | 1 |
| response to vitamin | 1 |
| response to oxygen-containing compound | 1 |
| response to nutrient levels | 1 |
| peptide binding | 1 |
| molecular_function | 1 |
| cholinesterase activity | 1 |
| carboxylic ester hydrolase activity | 1 |
| hydrolase activity | 1 |
| cation binding | 1 |
| binding | 1 |
| catalytic activity | 1 |
| hydrolase activity, acting on ester bonds | 1 |
| nuclear envelope | 1 |
| organelle envelope lumen | 1 |
| endoplasmic reticulum | 1 |
| intracellular organelle lumen | 1 |
| membrane | 1 |
| cell periphery | 1 |
Protein interactions and networks
STRING
2230 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| BCHE | COLQ | Q9Y215 | 967 |
| BCHE | ALB | P02768 | 903 |
| BCHE | CHAT | P28329 | 871 |
| BCHE | APOE | P02649 | 829 |
| BCHE | GPT | P24298 | 828 |
| BCHE | DOK7 | Q18PE1 | 798 |
| BCHE | MAOB | P27338 | 791 |
| BCHE | PON1 | P27169 | 788 |
| BCHE | MGAM | O43451 | 771 |
| BCHE | SI | P14410 | 771 |
| BCHE | MAOA | P21397 | 745 |
| BCHE | MUSK | O15146 | 743 |
| BCHE | BACE1 | P56817 | 742 |
| BCHE | CRP | P02741 | 731 |
| BCHE | APP | P05067 | 721 |
IntAct
91 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| BCHE | BCHE | psi-mi:“MI:0407”(direct interaction) | 0.840 |
| BCHE | ENTPD5 | psi-mi:“MI:0914”(association) | 0.640 |
| SMR3B | BCHE | psi-mi:“MI:0915”(physical association) | 0.560 |
| BCHE | SEC11A | psi-mi:“MI:0915”(physical association) | 0.560 |
| CASP6 | BCHE | psi-mi:“MI:0915”(physical association) | 0.560 |
| LAMP2 | BCHE | psi-mi:“MI:0915”(physical association) | 0.560 |
| RAN | BCHE | psi-mi:“MI:0915”(physical association) | 0.560 |
| BAG6 | BCHE | psi-mi:“MI:0915”(physical association) | 0.560 |
| KLF11 | BCHE | psi-mi:“MI:0915”(physical association) | 0.560 |
| DNAJB6 | BCHE | psi-mi:“MI:0915”(physical association) | 0.560 |
| PRPF40A | BCHE | psi-mi:“MI:0915”(physical association) | 0.560 |
| BCHE | ATXN3 | psi-mi:“MI:0915”(physical association) | 0.560 |
BioGRID (93): BCHE (Affinity Capture-MS), BCHE (Affinity Capture-MS), LOXL1 (Affinity Capture-MS), ENTPD5 (Affinity Capture-MS), LTBP1 (Affinity Capture-MS), NAF1 (Affinity Capture-MS), ACTN3 (Affinity Capture-MS), PALLD (Affinity Capture-MS), KIAA1598 (Affinity Capture-MS), BCHE (Affinity Capture-MS), BCHE (Affinity Capture-MS), TUBA3C (Affinity Capture-MS), DKC1 (Affinity Capture-MS), MANEAL (Affinity Capture-MS), BCHE (Affinity Capture-MS)
ESM2 similar proteins: A0A8B0RBM2, B2D0J5, D6WMZ8, O16168, O16169, O16170, O16171, O16172, O16173, O42275, O62760, O62761, P04058, P06276, P07692, P08171, P12992, P16303, P18167, P21927, P25725, P25726, P25727, P30122, P32749, P35501, P35502, P38433, P47982, P81908, Q03311, Q04456, Q04457, Q04791, Q05487, Q08662, Q27459, Q27677, Q5GRG2, Q63010
Diamond homologs: A0A060S684, A0A0E4AET8, A0A8B0RBM2, B0F2B4, D2D3B6, D6WMZ8, G3V7J5, I1RDA9, O00748, O16168, O16169, O16170, O16171, O16172, O16173, O42275, O46421, O62760, O62761, O70631, P04058, P06276, P07882, P08171, P0C6R3, P10959, P12337, P12992, P14943, P16303, P16854, P18142, P19835, P21837, P21927, P23141, P23953, P25725, P25726, P25727
SIGNOR signaling
3 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| HIPK2 | “down-regulates quantity” | BCHE | phosphorylation |
| BCHE | “down-regulates quantity” | acetylcholine | “chemical modification” |
| Pyridostigmine | “down-regulates activity” | BCHE | “chemical inhibition” |
Disease & clinical
Clinical variants and AI predictions
ClinVar
237 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 14 |
| Likely pathogenic | 41 |
| Uncertain significance | 132 |
| Likely benign | 11 |
| Benign | 3 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 13216 | NM_000055.4(BCHE):c.435delinsAG (p.Phe146fs) | Pathogenic |
| 13222 | BCHE Newfoundland | Pathogenic |
| 13223 | BCHE Cynthiana | Pathogenic |
| 13224 | BCHE Johannesburg | Pathogenic |
| 13225 | NM_000055.4:c.1160_1161ins[N[342];1146_1160] | Pathogenic |
| 13227 | NM_000055.4(BCHE):c.467A>G (p.Tyr156Cys) | Pathogenic |
| 13229 | BCHE*FS126 | Pathogenic |
| 1324374 | NM_000055.4(BCHE):c.1129G>T (p.Glu377Ter) | Pathogenic |
| 225301 | NM_000055.4(BCHE):c.1177G>C (p.Gly393Arg) | Pathogenic |
| 2682418 | NM_000055.4(BCHE):c.777G>A (p.Trp259Ter) | Pathogenic |
| 3024629 | GRCh37/hg19 3q26.1-26.2(chr3:164432414-167873834)x1 | Pathogenic |
| 344097 | NM_000055.4(BCHE):c.428G>A (p.Gly143Asp) | Pathogenic |
| 552544 | NM_000055.4(BCHE):c.382C>T (p.Pro128Ser) | Pathogenic |
| 594478 | NM_000055.4(BCHE):c.100del (p.Ile34fs) | Pathogenic |
| 13217 | NM_000055.4(BCHE):c.508G>A (p.Val170Met) | Likely pathogenic |
| 1323972 | NM_000055.4(BCHE):c.1158del (p.Pro387fs) | Likely pathogenic |
| 1323974 | NM_000055.4(BCHE):c.824_827dup (p.Lys276delinsAsnTer) | Likely pathogenic |
| 1677196 | NM_000055.4(BCHE):c.594T>G (p.Asp198Glu) | Likely pathogenic |
| 2437005 | NM_000055.4(BCHE):c.932_935dup (p.Pro313fs) | Likely pathogenic |
| 2501206 | NM_000055.4(BCHE):c.1171_1174dup (p.Phe392Ter) | Likely pathogenic |
| 370179 | NM_000055.4(BCHE):c.666_667del (p.Phe223fs) | Likely pathogenic |
| 370346 | NM_000055.4(BCHE):c.895G>T (p.Glu299Ter) | Likely pathogenic |
| 370364 | NM_000055.4(BCHE):c.793del (p.Tyr265fs) | Likely pathogenic |
| 370388 | NM_000055.4(BCHE):c.1073dup (p.Leu358fs) | Likely pathogenic |
| 370431 | NM_000055.4(BCHE):c.1528G>T (p.Glu510Ter) | Likely pathogenic |
| 370446 | NM_000055.4(BCHE):c.1684+1G>T | Likely pathogenic |
| 370447 | NM_000055.4(BCHE):c.1685-2A>G | Likely pathogenic |
| 370518 | NM_000055.4(BCHE):c.495_498del (p.Arg166fs) | Likely pathogenic |
| 370709 | NM_000055.4(BCHE):c.493del (p.Glu165fs) | Likely pathogenic |
| 370809 | NM_000055.4(BCHE):c.206_207del (p.Leu69fs) | Likely pathogenic |
SpliceAI
890 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 3:165775907:T:TA | donor_gain | 1.0000 |
| 3:165775914:T:A | donor_gain | 1.0000 |
| 3:165773503:TTTC:T | acceptor_gain | 0.9900 |
| 3:165773504:TTC:T | acceptor_gain | 0.9900 |
| 3:165773505:TC:T | acceptor_gain | 0.9900 |
| 3:165773506:CC:C | acceptor_gain | 0.9900 |
| 3:165773507:C:CC | acceptor_gain | 0.9900 |
| 3:165786141:ACAC:A | donor_loss | 0.9900 |
| 3:165786142:CA:C | donor_loss | 0.9900 |
| 3:165786143:AC:A | donor_loss | 0.9900 |
| 3:165786144:C:CA | donor_loss | 0.9900 |
| 3:165786309:TTC:T | acceptor_gain | 0.9900 |
| 3:165786310:TC:T | acceptor_gain | 0.9900 |
| 3:165786311:CC:C | acceptor_gain | 0.9900 |
| 3:165786311:CCTA:C | acceptor_loss | 0.9900 |
| 3:165786312:C:CC | acceptor_gain | 0.9900 |
| 3:165786312:CT:C | acceptor_loss | 0.9900 |
| 3:165786313:T:G | acceptor_loss | 0.9900 |
| 3:165837307:AACTT:A | donor_loss | 0.9900 |
| 3:165837308:ACTTA:A | donor_loss | 0.9900 |
| 3:165837309:CTTA:C | donor_loss | 0.9900 |
| 3:165837311:TA:T | donor_loss | 0.9900 |
| 3:165837312:AC:A | donor_gain | 0.9900 |
| 3:165837312:ACCC:A | donor_loss | 0.9900 |
| 3:165837313:C:CT | donor_loss | 0.9900 |
| 3:165837313:CC:C | donor_gain | 0.9900 |
| 3:165837371:T:TA | donor_gain | 0.9900 |
| 3:165773504:TTCCT:T | acceptor_loss | 0.9800 |
| 3:165773505:TCCT:T | acceptor_loss | 0.9800 |
| 3:165773506:CCTG:C | acceptor_loss | 0.9800 |
AlphaMissense
3999 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 3:165830510:C:A | R175M | 0.987 |
| 3:165829653:A:G | W461R | 0.985 |
| 3:165829653:A:T | W461R | 0.985 |
| 3:165830509:C:A | R175S | 0.984 |
| 3:165830509:C:G | R175S | 0.984 |
| 3:165830666:A:G | L123P | 0.984 |
| 3:165829651:C:A | W461C | 0.983 |
| 3:165829651:C:G | W461C | 0.983 |
| 3:165830491:G:C | F181L | 0.983 |
| 3:165830491:G:T | F181L | 0.983 |
| 3:165830493:A:G | F181L | 0.983 |
| 3:165829539:A:G | W499R | 0.982 |
| 3:165829539:A:T | W499R | 0.982 |
| 3:165830278:A:C | S252R | 0.980 |
| 3:165830278:A:T | S252R | 0.980 |
| 3:165830280:T:G | S252R | 0.980 |
| 3:165830455:G:C | N193K | 0.979 |
| 3:165830455:G:T | N193K | 0.979 |
| 3:165830510:C:G | R175T | 0.978 |
| 3:165830658:A:G | W126R | 0.977 |
| 3:165830658:A:T | W126R | 0.977 |
| 3:165830674:A:C | C120W | 0.976 |
| 3:165830662:A:C | N124K | 0.975 |
| 3:165830662:A:T | N124K | 0.975 |
| 3:165829558:A:C | S492R | 0.974 |
| 3:165829558:A:T | S492R | 0.974 |
| 3:165829560:T:G | S492R | 0.974 |
| 3:165830421:A:G | W205R | 0.974 |
| 3:165830421:A:T | W205R | 0.974 |
| 3:165830279:C:A | S252I | 0.972 |
dbSNP variants (sampled 300 via entrez): RS1000059265 (3:165799076 A>G), RS1000097292 (3:165777472 G>A,T), RS1000195546 (3:165822254 G>C), RS1000196327 (3:165783519 G>T), RS1000211717 (3:165775706 C>T), RS1000280946 (3:165810358 A>G), RS1000281274 (3:165793491 T>G), RS1000368916 (3:165826605 T>C), RS1000397891 (3:165826874 G>A), RS1000424863 (3:165781697 C>T), RS1000425489 (3:165820448 G>C), RS1000429388 (3:165834662 T>C), RS1000587006 (3:165781937 A>G), RS1000610678 (3:165803190 C>T), RS1000634082 (3:165814343 T>C)
Disease associations
OMIM: gene MIM:177400 | disease phenotypes: MIM:617936
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| butyrylcholinesterase deficiency | Definitive | Unknown |
Mondo (1): butyrylcholinesterase deficiency (MONDO:0015270)
Orphanet (1): Hereditary butyrylcholinesterase deficiency (Orphanet:132)
HPO phenotypes
11 total (11 of 11 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0001392 | Abnormality of the liver |
| HP:0001635 | Congestive heart failure |
| HP:0001658 | Myocardial infarction |
| HP:0002104 | Apnea |
| HP:0002664 | Neoplasm |
| HP:0002878 | Respiratory failure |
| HP:0003470 | Paralysis |
| HP:0004887 | Respiratory failure requiring assisted ventilation |
| HP:0012379 | Abnormal circulating enzyme concentration or activity |
| HP:0031035 | Chronic infection |
GWAS associations
11 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000675_16 | Heart failure | 6.000000e-06 |
| GCST001207_3 | Butyrylcholinesterase levels | 6.000000e-262 |
| GCST001247_5 | Cardiovascular disease risk factors | 6.000000e-92 |
| GCST001868_10 | Alzheimer’s disease biomarkers | 3.000000e-08 |
| GCST001910_1 | Aspirin hydrolysis (plasma) | 9.000000e-17 |
| GCST004048_1 | Fast beta electroencephalogram | 5.000000e-09 |
| GCST005352_10 | Paclitaxel disposition in epithelial ovarian cancer | 6.000000e-07 |
| GCST005352_6 | Paclitaxel disposition in epithelial ovarian cancer | 5.000000e-07 |
| GCST007430_27 | Peak expiratory flow | 5.000000e-08 |
| GCST007431_40 | Lung function (FEV1/FVC) | 9.000000e-12 |
| GCST007432_19 | FEV1 | 6.000000e-07 |
EFO canonical traits (7, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004571 | butyrylcholinesterase measurement |
| EFO:0005194 | amyloid-beta measurement |
| EFO:0005211 | aspirin hydrolysis measurement |
| EFO:0004357 | electroencephalogram measurement |
| EFO:0009718 | peak expiratory flow |
| EFO:0004713 | FEV/FVC ratio |
| EFO:0004314 | forced expiratory volume |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| C537417 | Butyrylcholinesterase deficiency (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL1914 (SINGLE PROTEIN), CHEMBL2095233 (SELECTIVITY GROUP)
Molecules with ChEMBL bioactivity
36 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 894,876 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1115 | PYRIDOSTIGMINE | 4 | 13,658 |
| CHEMBL1200970 | ETHOPROPAZINE HYDROCHLORIDE | 4 | 876 |
| CHEMBL1201092 | RIVASTIGMINE TARTRATE | 4 | 13 |
| CHEMBL1206 | ETHOPROPAZINE | 4 | 15,984 |
| CHEMBL1294 | QUINIDINE | 4 | 71,943 |
| CHEMBL1677 | TACRINE HYDROCHLORIDE | 4 | 11,745 |
| CHEMBL1678 | DONEPEZIL HYDROCHLORIDE | 4 | 22,635 |
| CHEMBL211471 | NEOSTIGMINE METHYLSULFATE | 4 | 2,191 |
| CHEMBL278020 | NEOSTIGMINE | 4 | 9,463 |
| CHEMBL295124 | BERBERINE | 4 | 26,682 |
| CHEMBL338975 | PHYSOSTIGMINE SALICYLATE | 4 | 2,644 |
| CHEMBL502 | DONEPEZIL | 4 | 43,493 |
| CHEMBL636 | RIVASTIGMINE | 4 | 30,156 |
| CHEMBL659 | GALANTAMINE | 4 | 30,894 |
| CHEMBL772 | RESERPINE | 4 | 330,645 |
| CHEMBL812 | PYRIDOSTIGMINE BROMIDE | 4 | 2,900 |
| CHEMBL887 | RASAGILINE | 4 | 12,978 |
| CHEMBL94 | PHYSOSTIGMINE | 4 | 14,305 |
| CHEMBL95 | TACRINE | 4 | 35,360 |
| CHEMBL310671 | SACCHARIN | 3 | 216,311 |
| CHEMBL50 | QUERCETIN | 3 | |
| CHEMBL51085 | EBSELEN | 3 | |
| CHEMBL521589 | BAMBUTEROL | 3 | |
| CHEMBL589390 | LATREPIRDINE | 3 | |
| CHEMBL121810 | GANSTIGMINE | 2 | |
| CHEMBL123248 | ESERIDINE | 2 | |
| CHEMBL284237 | DIZOCILPINE | 2 | |
| CHEMBL31574 | FISETIN | 2 | |
| CHEMBL329012 | ICOPEZIL MALEATE | 2 | |
| CHEMBL395280 | HUPERZINE A | 2 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB clinical annotations
14 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs1560022535 | Toxicity | 3 | succinylcholine | Apnea |
| rs1799807 | Toxicity | 3 | succinylcholine | Butyrylcholinesterase deficiency |
| rs1803274 | Efficacy | 3 | rivastigmine | Alzheimer Disease;Lewy Body Disease |
| rs1803274 | Other | 3 | cocaine | Cocaine dependence |
| rs1803274 | Efficacy | 3 | donepezil | Alzheimer Disease;Cognitive disorder |
| rs1803274 | Toxicity | 3 | succinylcholine | Butyrylcholinesterase deficiency |
| rs201820739 | Toxicity | 3 | succinylcholine | Apnea |
| rs28933389 | Toxicity | 3 | succinylcholine | |
| rs28933390 | Toxicity | 3 | succinylcholine | |
| rs531738678 | Toxicity | 3 | succinylcholine | Apnea |
| rs568724445 | Toxicity | 3 | succinylcholine | Apnea |
| rs745364489 | Toxicity | 3 | succinylcholine | Apnea |
| rs764841347 | Toxicity | 3 | succinylcholine | Apnea |
| rs774072493 | Toxicity | 3 | succinylcholine | Apnea |
PharmGKB variants
17 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs1355534 | BCHE | 0.00 | 0 | ||
| rs1799807 | BCHE | 3 | 3.00 | 1 | succinylcholine |
| rs1803274 | BCHE | 3 | 6.50 | 4 | donepezil;succinylcholine;rivastigmine;cocaine |
| rs4263329 | BCHE | 0.00 | 0 | ||
| rs4680662 | BCHE | 0.00 | 0 | ||
| rs28933389 | BCHE | 3 | 0.00 | 1 | succinylcholine |
| rs28933390 | BCHE | 3 | 0.25 | 1 | succinylcholine |
| rs104893684 | BCHE | 0.00 | 0 | ||
| rs772583466 | BCHE | 0.00 | 0 | ||
| rs755648929 | BCHE | 0.00 | 0 | ||
| rs764841347 | BCHE | 3 | 0.25 | 1 | succinylcholine |
| rs568724445 | BCHE | 3 | 0.25 | 1 | succinylcholine |
| rs1560022535 | BCHE | 3 | 0.25 | 1 | succinylcholine |
| rs745364489 | BCHE | 3 | 0.50 | 1 | succinylcholine |
| rs531738678 | BCHE | 3 | 0.25 | 1 | succinylcholine |
| rs201820739 | BCHE | 3 | 0.25 | 1 | succinylcholine |
| rs774072493 | BCHE | 3 | 0.25 | 1 | succinylcholine |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — Acetylcholine turnover
Most potent curated ligand interactions (5 total), top 5:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| bambuterol | Inhibition | 8.5 | pIC50 |
| physostigmine | Inhibition | 7.8 | pIC50 |
| rivastigmine | Inhibition | 7.4 | pIC50 |
| tacrine | Inhibition | 7.2 | pKi |
| pyridostigmine | Inhibition | 6.05 | pIC50 |
Binding affinities (BindingDB)
246 measured of 451 human assays (633 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| (1S)-7-chloro-15-ethyl-10-azatetracyclo[11.3.1.0^{2,11}.0^{4,9}]heptadeca-2(11),3,5,7,9,14-hexaen-3-amine | KI | 0.026 nM | |
| N-{3-[(6-chloro-1,2,3,4-tetrahydroacridin-9-yl)amino]propyl}-5-(1,2-dithiolan-3-yl)pentanamide | IC50 | 0.253 nM | |
| {3-[(6-chloro-1,2,3,4-tetrahydroacridin-9-yl)amino]propyl}[3-({7-chloro-15-methyl-10-azatetracyclo[11.3.1.0^{2,11}.0^{4,9}]heptadeca-2(11),3,5,7,9,14-hexaen-3-yl}amino)propyl]methylamine trihydrochloride | IC50 | 0.29 nM | |
| 3-{[methyl({3-[(9-oxo-9H-xanthen-3-yl)oxy]propyl})amino]methyl}phenyl N-methylcarbamate | IC50 | 0.3 nM | |
| 3-({7-chloro-15-methyl-10-azatetracyclo[11.3.1.0^{2,11}.0^{4,9}]heptadeca-2(11),3,5,7,9,14-hexaen-3-yl}amino)propyl[3-(1,2,3,4-tetrahydroacridin-9-ylamino)propyl]amine trihydrochloride | IC50 | 0.32 nM | |
| 3-{[methyl({7-[(9-oxo-9H-xanthen-3-yl)oxy]heptyl})amino]methyl}phenyl N-methylcarbamate | IC50 | 0.32 nM | |
| 7-chloro-15-methyl-N-[8-(1,2,3,4-tetrahydroacridin-9-ylamino)octyl]-10-azatetracyclo[11.3.1.0^{2,11}.0^{4,9}]heptadeca-2(11),3,5,7,9,14-hexaen-3-amine dihydrochloride | IC50 | 0.33 nM | |
| 3-Chloro-6,7,10,11-tetrahydro-9-methyl-12-{{7-[(6-chloro-1,2,3,4-tetrahydroacridin-9-yl)amino]heptyl}amino}-7,11-methanocycloocta[b]quinoline dihydrochloride | IC50 | 0.33 nM | |
| 7-chloro-15-methyl-N-[7-(1,2,3,4-tetrahydroacridin-9-ylamino)heptyl]-10-azatetracyclo[11.3.1.0^{2,11}.0^{4,9}]heptadeca-2(11),3,5,7,9,14-hexaen-3-amine dihydrochloride | IC50 | 0.34 nM | |
| 3-Chloro-6,7,10,11-tetrahydro-9-methyl-12-{{8-[(6-chloro-1,2,3,4-tetrahydroacridin-9-yl)amino]octyl}amino}-7,11-methanocycloocta[b]quinoline dihydrochloride | IC50 | 0.4 nM | |
| 7-chloro-N-{6-[(6-chloro-1,2,3,4-tetrahydroacridin-9-yl)amino]hexyl}-15-methyl-10-azatetracyclo[11.3.1.0^{2,11}.0^{4,9}]heptadeca-2(11),3,5,7,9,14-hexaen-3-amine dihydrochloride | IC50 | 0.45 nM | |
| 7-chloro-15-methyl-N-[6-(1,2,3,4-tetrahydroacridin-9-ylamino)hexyl]-10-azatetracyclo[11.3.1.0^{2,11}.0^{4,9}]heptadeca-2(11),3,5,7,9,14-hexaen-3-amine dihydrochloride | IC50 | 0.5 nM | |
| 3-{[methyl(7-{[(2Z)-3-oxo-2-(3,4,5-trimethoxybenzylidene)-2,3-dihydro-1-benzofuran-6-yl]oxy}heptyl)amino]methyl}phenyl methylcarbamate | IC50 | 0.52 nM | |
| 3-{[ethyl({3-[(9-oxo-9H-xanthen-3-yl)oxy]propyl})amino]methyl}phenyl N-methylcarbamate | IC50 | 0.56 nM | |
| 7-chloro-15-methyl-10-azatetracyclo[11.3.1.0^{2,11}.0^{4,9}]heptadeca-2,4(9),5,7,10,14-hexaen-3-amine | IC50 | 0.78 nM | |
| 15-ethyl-N-[8-(1,2,3,4-tetrahydroacridin-9-ylamino)octyl]-10-azatetracyclo[11.3.1.0^{2,11}.0^{4,9}]heptadeca-2(11),3,5,7,9,14-hexaen-3-amine dihydrochloride | IC50 | 0.82 nM | |
| 3-{[methyl({5-[(9-oxo-9H-xanthen-3-yl)oxy]pentyl})amino]methyl}phenyl N-methylcarbamate | IC50 | 0.82 nM | |
| 3-({methyl[3-({5-oxo-5H-chromeno[2,3-b]pyridin-8-yl}oxy)propyl]amino}methyl)phenyl N-methylcarbamate hydrochloride | IC50 | 1.1 nM | |
| [3-(2-acetamidoethyl)-1H-indol-5-yl] N-[10-(1,2,3,4-tetrahydroacridin-9-ylamino)decyl]carbamate | IC50 | 1.18 nM | US-8841453: Hybrid cholinesterase inhibitors |
| N-[7-(1,2,3,4-tetrahydroacridin-9-ylamino)heptyl]-1,2,3,4-tetrahydroacridin-9-amine | KI | 1.3 nM | |
| 3-{[methyl({6-[(9-oxo-9H-xanthen-3-yl)oxy]hexyl})amino]methyl}phenyl N-methylcarbamate | IC50 | 1.4 nM | |
| [3-(2-acetamidoethyl)-1H-indol-5-yl] N-[10-[(7-chloro-1,2,3,4-tetrahydroacridin-9-yl)amino]decyl]carbamate | IC50 | 1.43 nM | US-8841453: Hybrid cholinesterase inhibitors |
| 3-{[methyl(7-{[(2E)-1-oxo-2-(3,4,5-trimethoxybenzylidene)-2,3-dihydro-1H-inden-5-yl]oxy}heptyl)amino]methyl}phenyl methylcarbamate | IC50 | 1.8 nM | |
| N-[8-(1,2,3,4-tetrahydroacridin-9-ylamino)octyl]-1,2,3,4-tetrahydroacridin-9-amine | KI | 1.9 nM | |
| 3-{[methyl(7-{[(2Z)-3-oxo-2-(phenylmethylidene)-2,3-dihydro-1-benzofuran-6-yl]oxy}heptyl)amino]methyl}phenyl N-methylcarbamate | IC50 | 1.95 nM | |
| 3-{[methyl(7-{[(2Z)-2-(2-naphthylmethylene)-3-oxo-2,3-dihydro-1-benzofuran-6-yl]oxy}heptyl)amino]methyl}phenyl methylcarbamate | IC50 | 2.09 nM | |
| 3-{[methyl(7-{[(2Z)-2-(1-naphthylmethylene)-3-oxo-2,3-dihydro-1-benzofuran-6-yl]oxy}heptyl)amino]methyl}phenyl methylcarbamate | IC50 | 2.76 nM | |
| Compound 12.HCl | IC50 | 2.8 nM | |
| 3-{[methyl(3-{[(2Z)-3-oxo-2-(3,4,5-trimethoxybenzylidene)-2,3-dihydro-1-benzofuran-6-yl]oxy}propyl)amino]methyl}phenyl methylcarbamate | IC50 | 2.99 nM | |
| 3-{[methyl(3-{[(2Z)-2-(naphthalen-2-ylmethylidene)-3-oxo-2,3-dihydro-1-benzofuran-6-yl]oxy}propyl)amino]methyl}phenyl N-methylcarbamate | IC50 | 3.41 nM | |
| [3-(2-acetamidoethyl)-1H-indol-5-yl] N-[12-(1,2,3,4-tetrahydroacridin-9-ylamino)dodecyl]carbamate | IC50 | 3.8 nM | US-8841453: Hybrid cholinesterase inhibitors |
| [3-(2-acetamidoethyl)-1H-indol-5-yl] N-[8-(1,2,3,4-tetrahydroacridin-9-ylamino)octyl]carbamate | IC50 | 4.61 nM | US-8841453: Hybrid cholinesterase inhibitors |
| 3-{[methyl(7-{[(6E)-5-oxo-6-(3,4,5-trimethoxybenzylidene)-5,6,7,8-tetrahydronaphthalen-2-yl]oxy}heptyl)amino]methyl}phenyl methylcarbamate | IC50 | 4.94 nM | |
| 3-({3-(4-benzoylphenoxy)propylamino}methyl)phenyl N-methylcarbamate | IC50 | 5.4 nM | |
| 3-{[methyl({3-[(2-oxo-2H-chromen-7-yl)oxy]propyl})amino]methyl}phenyl N-methylcarbamate hydrochloride | IC50 | 5.7 nM | |
| 3-{[methyl({3-[(4-oxo-2-phenyl-4H-chromen-7-yl)oxy]propyl})amino]methyl}phenyl N-methylcarbamate hydrochloride | IC50 | 5.7 nM | |
| (9E)-7-(7-(1,2,3,4-Tetrahydroacridin-9-ylamino)heptylamino)-9-ethylidene-3-methylbicyclo[3.3.1]non-3-ene-1-carboxylic Acid Methyl Ester | KI | 6.4 nM | |
| 3-{[methyl({8-[(9-oxo-9H-xanthen-3-yl)oxy]octyl})amino]methyl}phenyl N-methylcarbamate | IC50 | 6.8 nM | |
| 3-{[methyl(3-{[(2Z)-2-(1-naphthylmethylene)-3-oxo-2,3-dihydro-1-benzofuran-6-yl]oxy}propyl)amino]methyl}phenyl methylcarbamate | IC50 | 6.86 nM | |
| 5-(1,2-dithiolan-3-yl)-N-[3-(1,2,3,4-tetrahydroacridin-9-ylamino)propyl]pentanamide | IC50 | 6.96 nM | |
| [3-(2-acetamidoethyl)-1H-indol-5-yl] N-[12-[(7-chloro-1,2,3,4-tetrahydroacridin-9-yl)amino]dodecyl]carbamate | IC50 | 7 nM | US-8841453: Hybrid cholinesterase inhibitors |
| [3-(2-acetamidoethyl)-1H-indol-5-yl] N-[7-[(6-chloro-1,2,3,4-tetrahydroacridin-9-yl)amino]heptyl]carbamate | IC50 | 7.7 nM | US-8841453: Hybrid cholinesterase inhibitors |
| 3-{[(7-{[(2Z)-2-[(3,4-dichlorophenyl)methylidene]-3-oxo-2,3-dihydro-1-benzofuran-6-yl]oxy}heptyl)(methyl)amino]methyl}phenyl N-methylcarbamate | IC50 | 8 nM | |
| [3-(2-acetamidoethyl)-1H-indol-5-yl] N-[10-[(6-chloro-1,2,3,4-tetrahydroacridin-9-yl)amino]decyl]carbamate | IC50 | 8.1 nM | US-8841453: Hybrid cholinesterase inhibitors |
| (2S,6R)-3-methyl-8-thia-3-azatricyclo[7.4.0.0^{2,6}]trideca-1(13),9,11-trien-10-yl N-methylcarbamate hydrochloride | IC50 | 8.11 nM | |
| 3-({methyl[3-({5-oxo-5H-chromeno[2,3-b]pyridin-8-yl}oxy)propyl]amino}methyl)phenyl N-butylcarbamate hydrochloride | IC50 | 8.9 nM | |
| 3-{[methyl(7-{[(3E)-4-oxo-3-(3,4,5-trimethoxybenzylidene)-3,4-dihydro-2H-chromen-7-yl]oxy}heptyl)amino]methyl}phenyl methylcarbamate | IC50 | 9.81 nM | |
| (3aS)-1,3a,8-trimethyl-1H,2H,3H,3aH,8H,8aH-pyrrolo[2,3-b]indol-5-yl N-(2-methylphenyl)carbamate | IC50 | 10 nM | |
| tolserine.tartaric acid | IC50 | 10 nM | |
| homotolserine | IC50 | 10 nM |
ChEMBL bioactivities
3709 potent at pChembl≥5 of 4618 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 10.95 | Ki | 0.0111 | nM | CHEMBL4080419 |
| 10.67 | IC50 | 0.0212 | nM | CHEMBL1814730 |
| 10.57 | IC50 | 0.0267 | nM | TACRINE |
| 10.52 | IC50 | 0.03 | nM | CHEMBL224336 |
| 10.45 | IC50 | 0.0352 | nM | CHEMBL5080685 |
| 10.45 | IC50 | 0.0354 | nM | CHEMBL1814731 |
| 10.42 | IC50 | 0.038 | nM | CHEMBL2019034 |
| 10.41 | IC50 | 0.039 | nM | CHEMBL5201089 |
| 10.35 | IC50 | 0.0449 | nM | CHEMBL1814729 |
| 10.22 | Ki | 0.06 | nM | CHEMBL3099496 |
| 10.19 | Kd | 0.064 | nM | CHEMBL5201089 |
| 10.15 | IC50 | 0.07 | nM | CHEMBL4444855 |
| 10.10 | IC50 | 0.08 | nM | CHEMBL2019032 |
| 10.10 | IC50 | 0.08 | nM | CHEMBL5195228 |
| 10.03 | Ki | 0.094 | nM | CHEMBL5201089 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL2019038 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL2019037 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL2019035 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL225198 |
| 9.96 | IC50 | 0.11 | nM | CHEMBL5200785 |
| 9.89 | IC50 | 0.13 | nM | CHEMBL5181960 |
| 9.88 | Ki | 0.131 | nM | CHEMBL4089082 |
| 9.86 | IC50 | 0.139 | nM | CHEMBL219316 |
| 9.85 | IC50 | 0.141 | nM | CHEMBL219264 |
| 9.82 | IC50 | 0.15 | nM | CHEMBL2019030 |
| 9.82 | IC50 | 0.15 | nM | CHEMBL4476861 |
| 9.82 | IC50 | 0.15 | nM | CHEMBL570764 |
| 9.79 | Ki | 0.163 | nM | CHEMBL32823 |
| 9.77 | IC50 | 0.17 | nM | CHEMBL4464964 |
| 9.75 | IC50 | 0.177 | nM | CHEMBL5092094 |
| 9.74 | Ki | 0.18 | nM | CHEMBL5186889 |
| 9.66 | IC50 | 0.22 | nM | CHEMBL5184728 |
| 9.65 | IC50 | 0.226 | nM | CHEMBL384886 |
| 9.62 | IC50 | 0.24 | nM | CHEMBL3642053 |
| 9.60 | IC50 | 0.25 | nM | CHEMBL3642040 |
| 9.60 | IC50 | 0.25 | nM | CHEMBL3642049 |
| 9.60 | IC50 | 0.25 | nM | CHEMBL4293015 |
| 9.59 | IC50 | 0.26 | nM | CHEMBL4461027 |
| 9.59 | IC50 | 0.26 | nM | CHEMBL5201951 |
| 9.59 | IC50 | 0.26 | nM | CHEMBL5184944 |
| 9.58 | IC50 | 0.265 | nM | CHEMBL5078555 |
| 9.57 | IC50 | 0.27 | nM | CHEMBL3827288 |
| 9.57 | Ki | 0.27 | nM | CHEMBL501587 |
| 9.55 | IC50 | 0.28 | nM | CHEMBL3642052 |
| 9.55 | IC50 | 0.28 | nM | CHEMBL3827610 |
| 9.53 | IC50 | 0.293 | nM | CHEMBL216159 |
| 9.49 | IC50 | 0.32 | nM | CHEMBL189957 |
| 9.49 | IC50 | 0.32 | nM | CHEMBL5282182 |
| 9.46 | IC50 | 0.35 | nM | CHEMBL5185039 |
| 9.43 | Kd | 0.37 | nM | CHEMBL5195228 |
PubChem BioAssay actives
2849 with measured affinity, of 6100 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 3-(1H-indol-3-yl)-N-[3-[methyl-[3-(1,2,3,4-tetrahydroacridin-9-ylamino)propyl]amino]propyl]propanamide | 1796276: In Vitro Enzyme Inhibition Assay from Article 10.1021/jm0503289: “Design, synthesis, and biological evaluation of dual binding site acetylcholinesterase inhibitors: new disease-modifying agents for Alzheimer’s disease.” | ic50 | <0.0001 | uM |
| N-[[1-(2,3-dihydro-1H-inden-2-yl)piperidin-3-yl]methyl]-N-[2-(dimethylamino)ethyl]naphthalene-2-carboxamide;hydrochloride | 1472409: Competitive inhibition of recombinant human BChE using butyrylthiocholine iodide as substrate at pH 8 by stopped flow assay | ki | <0.0001 | uM |
| N-[5-(1,2,3,4-tetrahydroacridin-9-ylamino)pentyl]acridine-9-carboxamide | 1529424: Inhibition of BuChE (unknown origin) | ic50 | <0.0001 | uM |
| methyl 2-methoxy-6-[8-(1,2,3,4-tetrahydroacridin-9-ylamino)octyl]benzoate | 1831859: Inhibition of human serum BChE using butyrylthiocholine iodide as substrate preincubated for 20 mins followed by substrate addition by Ellman’s method | ic50 | <0.0001 | uM |
| N-[[2-(diethylaminomethyl)phenyl]methyl]-3-[(4-fluorobenzoyl)amino]-5-methylbenzamide | 1886723: Inhibition of human BChE using acetylthiocholine iodide or butyrylthiocholine iodide as substrate preincubated for 5 mins followed by substrate addition by Ellman’s method | ic50 | <0.0001 | uM |
| 1,2,3,4-tetrahydroacridin-9-amine | 612151: Inhibition of BChE by Ellman’s method | ic50 | <0.0001 | uM |
| N-[7-[(6-chloro-1,2,3,4-tetrahydroacridin-9-yl)amino]heptyl]-3-(1H-indol-3-yl)propanamide | 1796276: In Vitro Enzyme Inhibition Assay from Article 10.1021/jm0503289: “Design, synthesis, and biological evaluation of dual binding site acetylcholinesterase inhibitors: new disease-modifying agents for Alzheimer’s disease.” | ic50 | 0.0001 | uM |
| naphthalen-1-yl-[3-(3-piperidin-1-ylpropoxy)indazol-1-yl]methanone | 1601893: Inhibition of human serum BChE using butyrylthiocholine as substrate by Ellman’s assay | ic50 | 0.0001 | uM |
| naphthalen-1-yl-[3-(3-pyrrolidin-1-ylpropoxy)indazol-1-yl]methanone | 1601893: Inhibition of human serum BChE using butyrylthiocholine as substrate by Ellman’s assay | ic50 | 0.0001 | uM |
| N-[[2-(diethylaminomethyl)phenyl]methyl]-3-[(4-iodobenzoyl)amino]benzamide | 1886723: Inhibition of human BChE using acetylthiocholine iodide or butyrylthiocholine iodide as substrate preincubated for 5 mins followed by substrate addition by Ellman’s method | ic50 | 0.0001 | uM |
| 3-[(4-bromobenzoyl)amino]-N-[[2-(diethylaminomethyl)phenyl]methyl]benzamide | 1886723: Inhibition of human BChE using acetylthiocholine iodide or butyrylthiocholine iodide as substrate preincubated for 5 mins followed by substrate addition by Ellman’s method | ic50 | 0.0001 | uM |
| N-[6-oxo-6-[2-(1,2,3,4-tetrahydroacridin-9-yl)hydrazinyl]hexyl]-3-(3,4,5-trimethoxyphenyl)propanamide | 1797052: Cholinesterase Inhibition Assay from Article 10.1021/jm060742o: “Novel heterobivalent tacrine derivatives as cholinesterase inhibitors with notable selectivity toward butyrylcholinesterase.” | ic50 | 0.0001 | uM |
| N-[5-oxo-5-[2-(1,2,3,4-tetrahydroacridin-9-yl)hydrazinyl]pentyl]-3-(3,4,5-trimethoxyphenyl)propanamide | 1797052: Cholinesterase Inhibition Assay from Article 10.1021/jm060742o: “Novel heterobivalent tacrine derivatives as cholinesterase inhibitors with notable selectivity toward butyrylcholinesterase.” | ic50 | 0.0001 | uM |
| (2S)-2-acetamido-N-[(1-benzylpiperidin-4-yl)methyl]-3-(4-phenyltriazol-1-yl)propanamide | 1625094: Inhibition of recombinant human BuChE using butyrylthiocholine iodide as substrate preincubated for 5 mins followed by substrate addition and measured for 5 mins by Ellman’s method | ic50 | 0.0002 | uM |
| N-[4-oxo-4-[2-(1,2,3,4-tetrahydroacridin-9-yl)hydrazinyl]butyl]-3-(3,4,5-trimethoxyphenyl)propanamide | 1797052: Cholinesterase Inhibition Assay from Article 10.1021/jm060742o: “Novel heterobivalent tacrine derivatives as cholinesterase inhibitors with notable selectivity toward butyrylcholinesterase.” | ic50 | 0.0002 | uM |
| methyl 2-hydroxy-6-[8-(1,2,3,4-tetrahydroacridin-9-ylamino)octyl]benzoate | 1831859: Inhibition of human serum BChE using butyrylthiocholine iodide as substrate preincubated for 20 mins followed by substrate addition by Ellman’s method | ic50 | 0.0002 | uM |
| [3-[2-[butyl(2-cycloheptylethyl)amino]ethyl]-1H-indol-7-yl] 2-methylpropanoate | 1905354: Binding affinity to human recombinant BChE in enzyme-inhibitor complex | ki | 0.0002 | uM |
| 3-chloro-N-[[2-(diethylaminomethyl)phenyl]methyl]-5-[(4-fluorobenzoyl)amino]benzamide | 1886723: Inhibition of human BChE using acetylthiocholine iodide or butyrylthiocholine iodide as substrate preincubated for 5 mins followed by substrate addition by Ellman’s method | ic50 | 0.0002 | uM |
| [3-[[methyl-[7-(9-oxoxanthen-3-yl)oxyheptyl]amino]methyl]phenyl] N-methylcarbamate | 1916856: Inhibition of human serum BChE using butyrylthiocholine as substrate by Ellman’s method | ic50 | 0.0003 | uM |
| N-[2-(1-benzylpiperidin-4-yl)ethyl]-2-(1-methylindol-3-yl)acetamide | 1404012: Inhibition of recombinant human serum BuChE using butyrylthiocholine iodide as substrate pretreated for 5 mins followed by substrate addition measured for 5 mins by Ellman’s method | ic50 | 0.0003 | uM |
| [3-[[methyl-[5-[(6-oxo-7,8,9,10-tetrahydrobenzo[c]chromen-3-yl)oxy]pentyl]amino]methyl]phenyl] N-heptylcarbamate | 1313240: Inhibition of human serum BuChE using butyrylthiocholine iodide as substrate preincubated for 20 mins followed by substrate addition by Ellman’s method | ic50 | 0.0003 | uM |
| [3-[[methyl-[3-[(6-oxo-7,8,9,10-tetrahydrobenzo[c]chromen-3-yl)oxy]propyl]amino]methyl]phenyl] N-heptylcarbamate | 1313240: Inhibition of human serum BuChE using butyrylthiocholine iodide as substrate preincubated for 20 mins followed by substrate addition by Ellman’s method | ic50 | 0.0003 | uM |
| naphthalen-1-yl-[3-(2-piperidin-1-ylethoxy)indazol-1-yl]methanone | 1601893: Inhibition of human serum BChE using butyrylthiocholine as substrate by Ellman’s assay | ic50 | 0.0003 | uM |
| N-[3-[[2-(diethylaminomethyl)phenyl]methylcarbamoyl]phenyl]furan-2-carboxamide | 1886723: Inhibition of human BChE using acetylthiocholine iodide or butyrylthiocholine iodide as substrate preincubated for 5 mins followed by substrate addition by Ellman’s method | ic50 | 0.0003 | uM |
| 3,4,5-trimethoxy-N-[8-oxo-8-[2-(1,2,3,4-tetrahydroacridin-9-yl)hydrazinyl]octyl]benzamide | 1797052: Cholinesterase Inhibition Assay from Article 10.1021/jm060742o: “Novel heterobivalent tacrine derivatives as cholinesterase inhibitors with notable selectivity toward butyrylcholinesterase.” | ic50 | 0.0003 | uM |
| methyl 2-[8-[(6-chloro-1,2,3,4-tetrahydroacridin-9-yl)amino]octyl]-6-methoxybenzoate | 1831859: Inhibition of human serum BChE using butyrylthiocholine iodide as substrate preincubated for 20 mins followed by substrate addition by Ellman’s method | ic50 | 0.0003 | uM |
| N-[[2-(diethylaminomethyl)phenyl]methyl]-3-[(4-fluorobenzoyl)amino]-2-methylbenzamide | 1886723: Inhibition of human BChE using acetylthiocholine iodide or butyrylthiocholine iodide as substrate preincubated for 5 mins followed by substrate addition by Ellman’s method | ic50 | 0.0003 | uM |
| 1-(2-oxobutyl)-3-[6-(3,6,7-trihydroxy-5,8-dimethoxy-4-oxochromen-2-yl)-1,3-benzothiazol-2-yl]urea | 1950767: Inhibition of BuChE (unknown origin) | ic50 | 0.0003 | uM |
| N-[4-(1,2,3,4-tetrahydroacridin-9-ylamino)butyl]-N-[3-(1,2,3,4-tetrahydroacridin-9-ylsulfanyl)propyl]acetamide | 404429: Inhibition of human recombinant BuChE | ki | 0.0003 | uM |
| 1H-indol-6-yl N-[2-(1,2,3,4-tetrahydroacridin-9-ylamino)ethyl]carbamate | 2088353: Inhibition of human serum BuChE using butyrylthiocholine iodide as substrate incubated for 10 mins followed by substrate addition and measured after 10 mins by DTNB reagent based Ellman’s method | ic50 | 0.0004 | uM |
| N’-ethyl-N-(1,2,3,4-tetrahydroacridin-9-yl)-N’-[3-(1,2,3,4-tetrahydroacridin-9-ylamino)propyl]butane-1,4-diamine | 404429: Inhibition of human recombinant BuChE | ki | 0.0004 | uM |
| N-[(7-methoxy-1-benzofuran-2-yl)methyl]-N’-(1,2,3,4-tetrahydroacridin-9-yl)hexane-1,6-diamine | 1271505: Inhibition of human serum BChE using butyrylthiocholine iodide as substrate preincubated for 20 mins followed by substrate addition by Ellman’s method | ic50 | 0.0005 | uM |
| N’,N’-bis[(7-methoxy-1-benzofuran-2-yl)methyl]-N-(1,2,3,4-tetrahydroacridin-9-yl)hexane-1,6-diamine | 1271505: Inhibition of human serum BChE using butyrylthiocholine iodide as substrate preincubated for 20 mins followed by substrate addition by Ellman’s method | ic50 | 0.0005 | uM |
| [3-[[5-(5H-chromeno[2,3-b]pyridin-8-yloxy)pentyl-methylamino]methyl]phenyl] N-heptylcarbamate | 1313240: Inhibition of human serum BuChE using butyrylthiocholine iodide as substrate preincubated for 20 mins followed by substrate addition by Ellman’s method | ic50 | 0.0005 | uM |
| N-[5-[2-[3,4-bis(phenylmethoxy)phenyl]ethoxy]pentyl]-1,2,3,4-tetrahydroacridin-9-amine | 1564173: Inhibition of human serum BuChe by Ellman’s method | ic50 | 0.0005 | uM |
| N-[5-[2-(3,4-dimethoxyphenyl)ethoxy]pentyl]-1,2,3,4-tetrahydroacridin-9-amine | 1564173: Inhibition of human serum BuChe by Ellman’s method | ic50 | 0.0005 | uM |
| 3,4,5-trimethoxy-N-[7-oxo-7-[2-(1,2,3,4-tetrahydroacridin-9-yl)hydrazinyl]heptyl]benzamide | 1797052: Cholinesterase Inhibition Assay from Article 10.1021/jm060742o: “Novel heterobivalent tacrine derivatives as cholinesterase inhibitors with notable selectivity toward butyrylcholinesterase.” | ic50 | 0.0005 | uM |
| 5,6-dimethoxy-2-[[7-(1,2,3,4-tetrahydroacridin-9-ylamino)heptylamino]methyl]-2,3-dihydroinden-1-one | 1796282: Cholinesterase Inhibition Assay from Article 10.1016/j.bmc.2005.09.029: “Donepezil-tacrine hybrid related derivatives as new dual binding site inhibitors of AChE.” | ic50 | 0.0006 | uM |
| 5-[[3-(dimethylcarbamoyloxy)phenyl]methyl-methylamino]pentyl (E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate | 1846089: Inhibition of human BuchE preincubated for 6 mins followed by substrate addition and measured upto 3 mins using acetylthiocholine iodide as substrate by Ellman’s method | ic50 | 0.0006 | uM |
| 3-bromo-N-[[2-(diethylaminomethyl)phenyl]methyl]-5-[(4-fluorobenzoyl)amino]benzamide | 1886723: Inhibition of human BChE using acetylthiocholine iodide or butyrylthiocholine iodide as substrate preincubated for 5 mins followed by substrate addition by Ellman’s method | ic50 | 0.0006 | uM |
| N-[[2-(diethylaminomethyl)phenyl]methyl]-3-fluoro-5-[(4-fluorobenzoyl)amino]benzamide | 1886723: Inhibition of human BChE using acetylthiocholine iodide or butyrylthiocholine iodide as substrate preincubated for 5 mins followed by substrate addition by Ellman’s method | ic50 | 0.0006 | uM |
| [3-[[methyl-[3-(5-oxochromeno[2,3-b]pyridin-8-yl)oxypropyl]amino]methyl]phenyl] N-heptylcarbamate | 1313240: Inhibition of human serum BuChE using butyrylthiocholine iodide as substrate preincubated for 20 mins followed by substrate addition by Ellman’s method | ic50 | 0.0007 | uM |
| N-[3-(1,2,3,4-tetrahydroacridin-9-ylamino)propyl]-N-[4-(1,2,3,4-tetrahydroacridin-9-ylsulfanyl)butyl]acetamide | 404429: Inhibition of human recombinant BuChE | ki | 0.0007 | uM |
| N-[2-(1-benzylpiperidin-4-yl)ethyl]-2-(5-bromo-1H-indol-3-yl)acetamide | 1404012: Inhibition of recombinant human serum BuChE using butyrylthiocholine iodide as substrate pretreated for 5 mins followed by substrate addition measured for 5 mins by Ellman’s method | ic50 | 0.0007 | uM |
| N-[3-[[2-[(dipropylamino)methyl]phenyl]methylcarbamoyl]phenyl]thiophene-2-carboxamide | 1886723: Inhibition of human BChE using acetylthiocholine iodide or butyrylthiocholine iodide as substrate preincubated for 5 mins followed by substrate addition by Ellman’s method | ic50 | 0.0007 | uM |
| N-[4-(1,2,3,4-tetrahydroacridin-9-ylamino)butyl]-N-[3-(1,2,3,4-tetrahydroacridin-9-ylamino)propyl]acetamide | 404429: Inhibition of human recombinant BuChE | ki | 0.0007 | uM |
| [3-[[methyl-[5-(2-oxochromen-7-yl)oxypentyl]amino]methyl]phenyl] N-heptylcarbamate | 1313240: Inhibition of human serum BuChE using butyrylthiocholine iodide as substrate preincubated for 20 mins followed by substrate addition by Ellman’s method | ic50 | 0.0008 | uM |
| 3-[(4-chlorobenzoyl)amino]-N-[[2-(diethylaminomethyl)phenyl]methyl]benzamide | 1886723: Inhibition of human BChE using acetylthiocholine iodide or butyrylthiocholine iodide as substrate preincubated for 5 mins followed by substrate addition by Ellman’s method | ic50 | 0.0008 | uM |
| N’-methyl-N-(1,2,3,4-tetrahydroacridin-9-yl)-N’-[3-(1,2,3,4-tetrahydroacridin-9-ylamino)propyl]butane-1,4-diamine | 1059722: Inhibition of human butyrylcholine esterase | ki | 0.0008 | uM |
| N’-(1,2,3,4-tetrahydroacridin-9-yl)-N-[3-(1,2,3,4-tetrahydroacridin-9-ylsulfanyl)propyl]butane-1,4-diamine | 404429: Inhibition of human recombinant BuChE | ki | 0.0008 | uM |
CTD chemical–gene interactions
217 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Succinylcholine | affects response to substance, increases response to substance, affects hydrolysis, increases hydrolysis, increases metabolic processing (+4 more) | 43 |
| Paraoxon | decreases activity, decreases response to substance, decreases reaction, affects binding | 17 |
| Sarin | increases hydrolysis, increases reaction, affects reaction, decreases activity, decreases reaction (+4 more) | 16 |
| Cocaine | affects hydrolysis, increases hydrolysis, decreases metabolic processing, decreases response to substance, increases chemical synthesis (+3 more) | 14 |
| tabun | decreases reaction, affects activity, affects metabolic processing, affects binding, increases reaction (+1 more) | 12 |
| VX-agent | affects reaction, decreases activity, decreases reaction, affects cotreatment, decreases response to substance | 12 |
| pralidoxime | affects reaction, decreases activity, affects activity, decreases reaction, increases hydrolysis (+1 more) | 12 |
| Dichlorvos | affects binding, decreases activity, increases response to substance, decreases reaction | 11 |
| Pesticides | decreases activity, affects response to substance, increases abundance | 11 |
| Butyrylthiocholine | increases hydrolysis, increases metabolic processing, increases chemical synthesis, decreases reaction | 10 |
| Chlorpyrifos | affects cotreatment, decreases activity, decreases reaction, increases activity | 8 |
| Organophosphorus Compounds | decreases reaction, affects binding, decreases activity, increases response to substance, affects response to substance (+2 more) | 8 |
| Valproic Acid | affects expression, decreases expression, affects cotreatment, increases expression | 8 |
| Isoflurophate | decreases activity, decreases reaction, increases hydrolysis | 7 |
| Obidoxime Chloride | affects reaction, decreases activity, decreases reaction, increases activity | 7 |
| 2-(2-cresyl)-4H-1-3-2-benzodioxaphosphorin-2-oxide | affects binding, decreases activity, increases abundance, decreases alkylation, increases phosphorylation | 6 |
| asoxime chloride | increases activity, affects cotreatment, decreases response to substance, affects reaction, decreases activity (+2 more) | 6 |
| cyclohexyl methylphosphonofluoridate | decreases reaction, decreases activity | 6 |
| Mivacurium | affects response to substance, increases response to substance | 6 |
| Soman | affects binding, increases reaction, decreases response to substance, decreases activity, decreases reaction | 6 |
| profenamine | decreases reaction, increases hydrolysis, decreases activity | 5 |
| methamidophos | affects binding, decreases activity, decreases reaction | 4 |
| Diazinon | affects cotreatment, decreases activity, affects binding | 4 |
| Dibucaine | decreases activity, decreases reaction, decreases response to substance, increases metabolic processing | 4 |
| Echothiophate Iodide | decreases reaction, increases hydrolysis, decreases activity | 4 |
| Organophosphates | decreases activity, affects reaction, decreases reaction, affects response to substance, affects binding | 4 |
| Tacrine | decreases activity | 4 |
| methylmercuric chloride | decreases expression, affects cotreatment | 3 |
| trichostatin A | affects cotreatment, increases expression | 3 |
| butyrylcholine | decreases hydrolysis, increases hydrolysis, decreases reaction | 3 |
ChEMBL screening assays
1172 unique, capped per target: 1162 binding, 9 admet, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1000390 | Binding | Inhibition of human plasma BChE after 20 mins by Ellman’s method | Synthesis and biological evaluation of (-)- and (+)-debromoflustramine B and its analogues as selective butyrylcholinesterase inhibitors. — J Med Chem |
| CHEMBL3283248 | ADMET | Stability of the compound assessed as butyrylcholine esterase (unknown origin)-mediated hydrolysis at 5 X 10’-3 M | Chemistry and biological activities of N,N-dimethylaminoethyl acrylate, a choline acetyltransferase inhibitor. — J Med Chem |
| CHEMBL4616999 | Functional | In-vivo inhibition of BuChE in human brain at 0.6 mg/kg, ip relative to control | Propargylamine-derived multi-target directed ligands for Alzheimer’s disease therapy. — Bioorg Med Chem Lett |
Cellosaurus cell lines
5 cell lines: 5 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_D9YH | Ubigene HeLa BCHE KO | Cancer cell line | Female |
| CVCL_E0TS | Ubigene Hep G2 BCHE KO | Cancer cell line | Male |
| CVCL_SE83 | HAP1 BCHE (-) 1 | Cancer cell line | Male |
| CVCL_SE84 | HAP1 BCHE (-) 2 | Cancer cell line | Male |
| CVCL_SE85 | HAP1 BCHE (-) 3 | Cancer cell line | Male |
Clinical trials (associated diseases)
6 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT01205867 | PHASE1 | COMPLETED | Study to Investigate the Safety and Tolerability of AZD8848 in Butyrylcholinesterase Deficient Subjects |
| NCT03290859 | Not specified | COMPLETED | Race-Specific Propofol Titration to Effect for Procedural Sedation |
| NCT03415607 | Not specified | UNKNOWN | Comparison on Succinylcholine Onset Time Assessed by Train of Four Stimulation Versus Clinical Judgment During Rapid Sequence Induction of Anesthesia |
| NCT03843580 | Not specified | COMPLETED | Transnasal Humidified Rapid-Insufflation Ventilatory Exchange (THRIVE) Could Decrease the Incidence of Oxygen Desaturation During Suspension Laryngoscopy: a Randomized Controlled Trial (Optilaryngo) |
| NCT05550584 | Not specified | COMPLETED | High Flow Oxygen During Operative Hysteroscopy. |
| NCT06707532 | Not specified | RECRUITING | The Potential Protective Effect of Using Muscle Relaxants During Electroporation Ablation (PFA) |
Related Atlas pages
- Associated diseases: butyrylcholinesterase deficiency
- Targeted by drugs: Bambuterol, Physostigmine, Pyridostigmine, Rivastigmine, Tacrine
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): butyrylcholinesterase deficiency, heart failure