BCL9
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Summary
BCL9 (BCL9 transcription coactivator, HGNC:1008) is a protein-coding gene on chromosome 1q21.2, encoding B-cell CLL/lymphoma 9 protein (O00512). Involved in signal transduction through the Wnt pathway. It is a selective cancer dependency (DepMap: 12.1% of cell lines).
BCL9 is associated with B-cell acute lymphoblastic leukemia. It may be a target of translocation in B-cell malignancies with abnormalities of 1q21. Its function is unknown. The overexpression of BCL9 may be of pathogenic significance in B-cell malignancies.
Source: NCBI Gene 607 — RefSeq curated summary.
At a glance
- Gene–disease (curated): congenital heart disease (Limited, ClinGen)
- GWAS associations: 5
- Clinical variants (ClinVar): 263 total — 4 pathogenic
- Druggable target: yes — 1 molecules with ChEMBL bioactivity
- Cancer driver (intOGen): loss-of-function (tumor-suppressor-like) across 3 cancer types
- Cancer dependency (DepMap): dependent in 12.1% of screened cell lines
- MANE Select transcript:
NM_004326
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:1008 |
| Approved symbol | BCL9 |
| Name | BCL9 transcription coactivator |
| Location | 1q21.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000116128 |
| Ensembl biotype | protein_coding |
| OMIM | 602597 |
| Entrez | 607 |
Gene structure
Transcript identifiers
Ensembl transcripts: 4 — 3 protein_coding, 1 protein_coding_CDS_not_defined
ENST00000234739, ENST00000497938, ENST00000683836, ENST00000684121
RefSeq mRNA: 1 — MANE Select: NM_004326
NM_004326
CCDS: CCDS30833
Canonical transcript exons
ENST00000234739 — 10 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000787543 | 147618816 | 147621057 |
| ENSE00000824226 | 147612883 | 147613199 |
| ENSE00000903093 | 147622271 | 147622531 |
| ENSE00001156122 | 147623842 | 147626216 |
| ENSE00001156130 | 147611578 | 147611889 |
| ENSE00001344643 | 147606784 | 147606866 |
| ENSE00001344647 | 147604777 | 147604911 |
| ENSE00001344656 | 147541501 | 147541674 |
| ENSE00003673699 | 147615803 | 147615902 |
| ENSE00003684403 | 147614427 | 147614616 |
Expression profiles
Bgee: expression breadth ubiquitous, 198 present calls, max score 93.24.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 11.7099 / max 328.5775, expressed in 1659 samples.
FANTOM5 promoters (5 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 4979 | 6.1574 | 1159 |
| 4982 | 3.7922 | 1516 |
| 4983 | 1.1200 | 646 |
| 4980 | 0.3682 | 181 |
| 4981 | 0.2722 | 129 |
Top tissues by expression
277 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| cortical plate | UBERON:0005343 | 93.24 | gold quality |
| ganglionic eminence | UBERON:0004023 | 91.10 | gold quality |
| ventricular zone | UBERON:0003053 | 90.83 | gold quality |
| islet of Langerhans | UBERON:0000006 | 86.11 | gold quality |
| right uterine tube | UBERON:0001302 | 85.17 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 84.85 | gold quality |
| left uterine tube | UBERON:0001303 | 84.15 | gold quality |
| body of uterus | UBERON:0009853 | 84.04 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 83.17 | gold quality |
| lower esophagus | UBERON:0013473 | 83.13 | gold quality |
| embryo | UBERON:0000922 | 82.88 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 82.06 | gold quality |
| vena cava | UBERON:0004087 | 81.55 | gold quality |
| fallopian tube | UBERON:0003889 | 81.40 | gold quality |
| cerebellar cortex | UBERON:0002129 | 81.30 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 81.29 | gold quality |
| cardia of stomach | UBERON:0001162 | 81.14 | silver quality |
| right hemisphere of cerebellum | UBERON:0014890 | 80.98 | gold quality |
| popliteal artery | UBERON:0002250 | 80.93 | gold quality |
| tibial artery | UBERON:0007610 | 80.90 | gold quality |
| endocervix | UBERON:0000458 | 80.64 | gold quality |
| ventral tegmental area | UBERON:0002691 | 80.63 | silver quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 80.62 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 80.58 | gold quality |
| rectum | UBERON:0001052 | 80.43 | gold quality |
| right ovary | UBERON:0002118 | 80.37 | gold quality |
| cerebellum | UBERON:0002037 | 80.23 | gold quality |
| aorta | UBERON:0000947 | 80.21 | gold quality |
| mucosa of stomach | UBERON:0001199 | 80.19 | gold quality |
| saphenous vein | UBERON:0007318 | 80.15 | silver quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 4.89 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): ESR1, ESR2, PAX6
miRNA regulators (miRDB)
189 targeting BCL9, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-188-3P | 100.00 | 68.76 | 1240 |
| HSA-MIR-3646 | 100.00 | 73.56 | 5283 |
| HSA-MIR-4668-3P | 100.00 | 68.74 | 2635 |
| HSA-MIR-4747-5P | 100.00 | 67.90 | 2681 |
| HSA-MIR-5196-5P | 100.00 | 67.98 | 2761 |
| HSA-MIR-4533 | 100.00 | 69.48 | 2758 |
| HSA-MIR-450A-1-3P | 100.00 | 69.33 | 1837 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-1252-5P | 100.00 | 69.80 | 2774 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-181A-5P | 99.99 | 72.96 | 2995 |
| HSA-MIR-181B-5P | 99.99 | 72.97 | 2996 |
| HSA-MIR-181C-5P | 99.99 | 72.95 | 2996 |
| HSA-MIR-181D-5P | 99.99 | 73.04 | 2997 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-32-5P | 99.98 | 75.21 | 1964 |
| HSA-MIR-92A-3P | 99.98 | 75.21 | 1960 |
| HSA-MIR-92B-3P | 99.98 | 75.25 | 1955 |
| HSA-MIR-25-3P | 99.98 | 74.60 | 1817 |
| HSA-MIR-363-3P | 99.98 | 74.72 | 1821 |
| HSA-MIR-367-3P | 99.98 | 74.83 | 1819 |
| HSA-MIR-6825-5P | 99.96 | 69.81 | 3431 |
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 12.1% of screened cell lines.
Literature-anchored findings (GeneRIF, showing 40)
- crystallographic analysis of how beta-catenin, BCL9, BCL9-2 and Tcf4 interact (PMID:17052462)
- BCL9 itself contains a transcriptional activation domain in the C terminus, which functionally synergizes in lymphoid cells with the C-terminal transactivation domain of beta-catenin. (PMID:18347063)
- Data show that human and Drosophila Pygo PHD fingers associate with their cognate HD1 domains from BCL9/Legless to bind specifically to the histone H3 tail methylated at lysine 4 (H3K4me). (PMID:18498752)
- Overexpression and altered subcellular localization of ATG16L1 protein in human oral squamous-cell carcinoma: correlation with lymphovascular invasion and lymph-node metastasis are reported. (PMID:18789482)
- The amino-terminus of the BCL9 peptide is critical for maintaining the wild-type binding affinity of the BCL9 peptide to beta-catenin. (PMID:19715304)
- Findings suggest that deregulation of BCL9 is an important contributing factor to tumor progression in multiple myeloma and colon neoplasms. (PMID:19738061)
- Pygo2 PHD is the only known PHD finger that is capable of interacting simultaneously with two functional ligands, B9L and BCL9 (PMID:20637214)
- These findings indicate that common variations in the BCL9 gene confer risk of schizophrenia and may also be associated with bipolar disorder and major depressive disorder in the Chinese Han population. (PMID:21383261)
- growth factor induced proliferation mediates a neutralizing response by significantly increasing miR-30c-2* which reduces BCL9 expression and cell proliferation in SKOV-3 and OVCAR-3 cells (PMID:22024689)
- Inhibition of the BCL9-beta-catenin interaction and selectively suppresses oncogenic Wnt transcription. (PMID:22914623)
- we detected five SNPs in the first two genes/loci - BCL9 and C9orf5 - strongly associated with negative symptoms of schizophrenia (PMID:23382809)
- By beta-catenin’s association with LEF1 and BCL9-2/B9L. (PMID:24419084)
- MiR-30-5p downregulation occurs as a result of interaction between multiple myeloma cells and bone marrow stromal cells, which in turn enhances expression of BCL9. (PMID:24599134)
- PCDH10 antagonized MM cell proliferation via the downregulation of Wnt/beta-catenin/BCL-9 signaling, whereas PCDH10 repressed the expression of AKT to promote the expression of GSK3beta and then to restrain the activation of beta-catenin (PMID:26081897)
- BCL9 is a molecular driver of DCIS invasive progression. (PMID:26384318)
- findings indicate that BCL9 most likely does not harbor a common genetic variant that can increase the risk for schizophrenia in the Japanese population (PMID:26494551)
- BCL9/9L-beta-catenin Signaling is Associated With Poor Outcome in Colorectal Cancer (PMID:26844272)
- results from this study demonstrated that hypoxia induced BCL-9 expression in human CRC cells mainly through HIF-1alpha, which could be an important underlying mechanism for increased BCL-9 expression in CRC. (PMID:27121066)
- it was demonstrated that miR218 modulated a novel molecular target and the present study provided novel insights into potential mechanisms of RCC oncogenesis. (PMID:27314976)
- MEF2D-BCL9-positive patients had B-cell precursor immunophenotype and were characterized as being older in age, being resistant to chemotherapy, having very early relapse, and having leukemic blasts that mimic morphologically mature B-cell leukemia with markedly high expression of HDAC9. (PMID:27507882)
- Specific regulation of BCL9 expression by HIF-1alpha may prove to be an underlying crosstalk between Wnt/beta-catenin signaling and hypoxia signaling pathways. (PMID:28074862)
- The authors used CRISPR/Cas9 genome engineering of Drosophila legless (lgs) and human BCL9 and B9L to show that the C-terminus downstream of their adaptor elements is crucial for Wnt responses. (PMID:28296634)
- miR-30a acts as a tumor suppressor by double-targeting COX-2 and BCL9, and significantly affects the development of H. pylori-induced gastric cancer, shedding new light on the mechanisms underlying H. pylori-associated gastric cancer. (PMID:28769030)
- SOX7 inhibits oncogenic beta-catenin-mediated transcription by disrupting the beta-catenin/BCL9 interaction. (PMID:29271667)
- The gene BCL9 is overexpressed in malignant adrenocortical tumors and promotes clonal ACC cell growth. These findings suggest that BCL9 overexpression may serve as an alternative driver of constitutive Wnt/beta-Catenin activation in ACC and could represent a potential molecular and diagnostic marker of tumor malignancy. (PMID:29428231)
- High BCL9 expression is associated with cisplatin-resistance in non-small cell lung cancer. (PMID:30009824)
- Results find that BCL9 is upregulated in osteosarcoma (OS) tissues and promotes OS proliferation, migration and invasion. BCL9 is a downstream target of miR-1301 in OS cells. In addition, BCL9 restoration could reversed the functional effects of miR-1301 overexpression on OS cell proliferation, migration and invasion. These results revealed the important role of BCL9 in OS tumor progression. (PMID:30172867)
- results revealed a novel role of BCL9 in controlling mitotic Wnt signalling to promote cell division and growth. (PMID:30217955)
- We found that miR-532 was significantly upregulated in patients with intervertebral disc degeneration and plays a pro-apoptotic role in human intervertebral disc nucleus pulposus cells. Further, Bcl-9 was confirmed to be a direct target of miR-532 and might be a potential target for disc degeneration therapy. (PMID:30472057)
- SNHG16 promotes BCL9 expression by sponging miR-1301 to facilitate the proliferation, migration and invasion of OS cells. (PMID:30909141)
- MiR-30c exerts tumor suppressive functions in colorectal carcinoma by directly targeting BCL9. (PMID:31081087)
- Investigated targeting the protein interactions of catenin beta 1 and B-cell lymphoma 9 protein (BCL9) binding using peptides designed by peptidomimetic drug design. (PMID:31088961)
- In response to spontaneous calcium transients or cellular stress, BCL9 is recruited adjacent to the interchromosomal regions, where it stabilizes the mRNA of calcium signaling and neural associated genes by interacting with paraspeckle proteins. (PMID:31911584)
- BCL9/BCL9L promotes tumorigenicity through immune-dependent and independent mechanisms in triple negative breast cancer. (PMID:33767438)
- miR-140-3p inhibits colorectal cancer progression and its liver metastasis by targeting BCL9 and BCL2. (PMID:33838016)
- Evidence for frequent concurrent DCUN1D1, FGFR1, BCL9 gene copy number amplification in squamous cell lung cancer. (PMID:33862557)
- LncRNA NCK1-AS1 exerts oncogenic property in gastric cancer by targeting the miR-22-3p/BCL9 axis to activate the Wnt/beta-catenin signaling. (PMID:33974352)
- The interactions of Bcl9/Bcl9L with beta-catenin and Pygopus promote breast cancer growth, invasion, and metastasis. (PMID:34545187)
- Hypoxia-inducible factor 1alpha induces osteo/odontoblast differentiation of human dental pulp stem cells via Wnt/beta-catenin transcriptional cofactor BCL9. (PMID:35027586)
- Prognostic and survival impact of BCL9 and RPS6KB1 copy number variation detected from circulating free DNA in hepatocellular carcinoma. (PMID:36803362)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | bcl9 | ENSDARG00000036687 |
| mus_musculus | Bcl9 | ENSMUSG00000038256 |
| rattus_norvegicus | Bcl9 | ENSRNOG00000017516 |
Paralogs (1): BCL9L (ENSG00000186174)
Protein
Protein identifiers
B-cell CLL/lymphoma 9 protein — O00512 (reviewed: O00512)
Alternative names: Protein legless homolog
All UniProt accessions (3): O00512, A0A804HI55, A0A804HIV1
UniProt curated annotations — full annotation on UniProt →
Function. Involved in signal transduction through the Wnt pathway. Promotes beta-catenin’s transcriptional activity.
Subunit / interactions. Binds to beta-catenin (CTNNB1), PYGO1 and PYGO2; the interaction with PYGO1 increases PYGO1 affinity to histone H3 methylated at ‘Lys 4’.
Subcellular location. Nucleus.
Tissue specificity. Detected at low levels in thymus, prostate, testis, ovary and small intestine, and at lower levels in spleen, colon and blood.
Disease relevance. A chromosomal aberration involving BCL9 is found in a patient with precursor B-cell acute lymphoblastic leukemia (ALL). Translocation t(1;14)(q21;q32). This translocation leaves the coding region intact, but may have pathogenic effects due to alterations in the expression level of BCL9. Several cases of translocations within the 3’-UTR of BCL9 have been found in B-cell malignancies.
Similarity. Belongs to the BCL9 family.
RefSeq proteins (1): NP_004317* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR013083 | Znf_RING/FYVE/PHD | Homologous_superfamily |
| IPR015668 | Bcl-9/Bcl-9l | Family |
| IPR024670 | BCL9_beta-catenin-bd_dom | Domain |
Pfam: PF11502
UniProt features (53 total): compositionally biased region 17, modified residue 12, region of interest 10, mutagenesis site 4, sequence conflict 3, sequence variant 2, strand 2, helix 2, chain 1
Structure
Experimental structures (PDB)
8 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 2VPB | X-RAY DIFFRACTION | 1.59 |
| 2VPG | X-RAY DIFFRACTION | 1.6 |
| 2VP7 | X-RAY DIFFRACTION | 1.65 |
| 2VPE | X-RAY DIFFRACTION | 1.7 |
| 3SL9 | X-RAY DIFFRACTION | 2.2 |
| 2GL7 | X-RAY DIFFRACTION | 2.6 |
| 8Y0P | X-RAY DIFFRACTION | 2.62 |
| 2VPD | X-RAY DIFFRACTION | 2.77 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O00512-F1 | 43.07 | 0.03 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (12): 104, 157, 172, 315, 318, 352, 687, 689, 801, 844, 907, 917
Mutagenesis-validated functional residues (4):
| Position | Phenotype |
|---|---|
| 358 | abolishes interaction with ctnnb1. |
| 359 | abolishes interaction with ctnnb1. |
| 366 | abolishes interaction with ctnnb1; when associated with a-369. |
| 369 | abolishes interaction with ctnnb1; when associated with a-366. |
Function
Pathways and Gene Ontology
Reactome pathways
5 pathways
| ID | Pathway |
|---|---|
| R-HSA-201722 | Formation of the beta-catenin:TCF transactivating complex |
| R-HSA-3769402 | Deactivation of the beta-catenin transactivating complex |
| R-HSA-162582 | Signal Transduction |
| R-HSA-195721 | Signaling by WNT |
| R-HSA-201681 | TCF dependent signaling in response to WNT |
MSigDB gene sets: 304 (showing top):
RNGTGGGC_UNKNOWN, GOBP_REGULATION_OF_CELLULAR_RESPONSE_TO_GROWTH_FACTOR_STIMULUS, FREAC2_01, BROWNE_HCMV_INFECTION_6HR_DN, GOBP_SOMATIC_STEM_CELL_POPULATION_MAINTENANCE, GOBP_MUSCLE_TISSUE_DEVELOPMENT, GGTGTGT_MIR329, GOBP_SKELETAL_MUSCLE_TISSUE_REGENERATION, TGCGCANK_UNKNOWN, RORA1_01, GRAESSMANN_APOPTOSIS_BY_SERUM_DEPRIVATION_UP, MAZ_Q6, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_DN, GOBP_GROWTH
GO Biological Process (9): transcription by RNA polymerase II (GO:0006366), myotube differentiation involved in skeletal muscle regeneration (GO:0014908), somatic stem cell population maintenance (GO:0035019), skeletal muscle cell differentiation (GO:0035914), myoblast differentiation (GO:0045445), positive regulation of transcription by RNA polymerase II (GO:0045944), canonical Wnt signaling pathway (GO:0060070), Wnt signaling pathway (GO:0016055), positive regulation of DNA-templated transcription (GO:0045893)
GO Molecular Function (3): transcription coactivator activity (GO:0003713), beta-catenin binding (GO:0008013), protein binding (GO:0005515)
GO Cellular Component (7): nucleoplasm (GO:0005654), cis-Golgi network (GO:0005801), sarcoplasm (GO:0016528), beta-catenin-TCF complex (GO:1990907), nucleus (GO:0005634), cytoplasm (GO:0005737), Golgi apparatus (GO:0005794)
Reactome top-level categories
Rollup of top-3 pathways:
| Category | Pathways |
|---|---|
| TCF dependent signaling in response to WNT | 2 |
| Signal Transduction | 1 |
| Signaling by WNT | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| intracellular membrane-bounded organelle | 3 |
| DNA-templated transcription | 2 |
| cell differentiation | 2 |
| positive regulation of DNA-templated transcription | 2 |
| cellular anatomical structure | 2 |
| cytoplasm | 2 |
| myotube differentiation | 1 |
| skeletal muscle tissue regeneration | 1 |
| stem cell population maintenance | 1 |
| skeletal muscle tissue development | 1 |
| muscle structure development | 1 |
| regulation of transcription by RNA polymerase II | 1 |
| transcription by RNA polymerase II | 1 |
| Wnt signaling pathway | 1 |
| cell surface receptor signaling pathway | 1 |
| regulation of DNA-templated transcription | 1 |
| positive regulation of RNA biosynthetic process | 1 |
| transcription coregulator activity | 1 |
| protein binding | 1 |
| binding | 1 |
| nuclear lumen | 1 |
| Golgi apparatus | 1 |
| RNA polymerase II transcription regulator complex | 1 |
| intracellular anatomical structure | 1 |
| endomembrane system | 1 |
Protein interactions and networks
STRING
774 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| BCL9 | CTNNB1 | P35222 | 996 |
| BCL9 | PYGO1 | Q9Y3Y4 | 984 |
| BCL9 | PYGO2 | Q9BRQ0 | 981 |
| BCL9 | HNF4A | P41235 | 979 |
| BCL9 | LEF1 | Q9UJU2 | 810 |
| BCL9 | FCRL5 | Q96RD9 | 721 |
| BCL9 | FCRL4 | Q96PJ5 | 709 |
| BCL9 | CDC73 | Q6P1J9 | 704 |
| BCL9 | AXIN1 | O15169 | 669 |
| BCL9 | MYC | P01106 | 649 |
| BCL9 | TCF7L1 | Q9HCS4 | 589 |
| BCL9 | BTRC | Q9Y297 | 588 |
| BCL9 | ACP6 | Q9NPH0 | 575 |
| BCL9 | BCL9L | Q86UU0 | 556 |
| BCL9 | TERT | O14746 | 540 |
IntAct
75 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| BCL9 | CTNNB1 | psi-mi:“MI:0915”(physical association) | 0.720 |
| CTNNB1 | BCL9 | psi-mi:“MI:0915”(physical association) | 0.720 |
| CTNNB1 | BCL9 | psi-mi:“MI:0407”(direct interaction) | 0.720 |
| PYGO1 | BCL9 | psi-mi:“MI:0914”(association) | 0.700 |
| PYGO1 | BCL9 | psi-mi:“MI:0407”(direct interaction) | 0.700 |
| BCL9 | PYGO1 | psi-mi:“MI:0407”(direct interaction) | 0.700 |
| BCL9 | PYGO1 | psi-mi:“MI:0915”(physical association) | 0.700 |
| PYGO1 | BCL9 | psi-mi:“MI:0915”(physical association) | 0.700 |
| BCL9 | PYGO2 | psi-mi:“MI:0915”(physical association) | 0.690 |
| PYGO2 | BCL9 | psi-mi:“MI:0914”(association) | 0.690 |
| PYGO2 | BCL9 | psi-mi:“MI:0915”(physical association) | 0.690 |
| CDC73 | BCL9 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CDC73 | BCL9 | psi-mi:“MI:0914”(association) | 0.560 |
| arm | BCL9 | psi-mi:“MI:0915”(physical association) | 0.550 |
| BCL9 | arm | psi-mi:“MI:0915”(physical association) | 0.550 |
| FOS | MYO1C | psi-mi:“MI:2364”(proximity) | 0.480 |
| MAP1LC3A | BCL9 | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| BCL9 | psi-mi:“MI:0407”(direct interaction) | 0.440 | |
| TCF4 | BCL9 | psi-mi:“MI:0915”(physical association) | 0.400 |
| Ctnnb1 | BCL9 | psi-mi:“MI:0915”(physical association) | 0.370 |
| BCL9 | pygo | psi-mi:“MI:0915”(physical association) | 0.370 |
| pygo | BCL9 | psi-mi:“MI:0915”(physical association) | 0.370 |
| CTNNA1 | BCL9 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (114): CTNNB1 (Affinity Capture-Western), BCL9 (Proximity Label-MS), BCL9 (Affinity Capture-MS), BCL9 (Reconstituted Complex), BCL9 (Proximity Label-MS), BCL9 (Affinity Capture-RNA), HSPA8 (Affinity Capture-MS), HSPA1B (Affinity Capture-MS), KIF11 (Affinity Capture-MS), PYGO2 (Affinity Capture-MS), CTNNB1 (Affinity Capture-MS), USP9X (Affinity Capture-MS), PYGO1 (Affinity Capture-MS), PLEC (Affinity Capture-MS), EPPK1 (Affinity Capture-MS)
ESM2 similar proteins: A1YFU7, A2AJK6, A2BH40, B2RWS6, D3YWE6, E9Q4N7, M9NEY8, O00512, O14497, O35126, O42368, O43365, O57401, P02831, P02833, P22810, P23441, P23512, P25822, P32182, P34545, P35582, P35583, P43698, P43699, P50220, P50901, P54258, P54259, P54269, P55317, Q06A37, Q08DG7, Q08E31, Q09472, Q0VCT9, Q10571, Q1KKX7, Q24248, Q24645
Diamond homologs: O00512, Q67FY2, Q67FY3, Q86UU0, Q95KQ6, Q9D219
SIGNOR signaling
3 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| BCL9 | up-regulates | CTNNB1 | binding |
| BCL9 | up-regulates | PYGO1 | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 64 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Formation of the nephric duct | 5 | 73.8× | 7e-07 |
| Deactivation of the beta-catenin transactivating complex | 7 | 37.9× | 1e-07 |
| Gastrulation | 5 | 30.2× | 3e-05 |
| TCF dependent signaling in response to WNT | 6 | 16.4× | 7e-05 |
| Formation of the beta-catenin:TCF transactivating complex | 5 | 14.0× | 7e-04 |
| Signaling by WNT | 5 | 13.0× | 8e-04 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| neuron fate specification | 6 | 72.6× | 3e-08 |
| branching involved in ureteric bud morphogenesis | 5 | 31.6× | 3e-05 |
| neuroblast proliferation | 5 | 31.6× | 3e-05 |
| positive regulation of miRNA transcription | 6 | 30.1× | 4e-06 |
| inner ear morphogenesis | 5 | 25.9× | 6e-05 |
| retina development in camera-type eye | 5 | 22.0× | 1e-04 |
| anatomical structure morphogenesis | 9 | 21.6× | 4e-08 |
| somatic stem cell population maintenance | 5 | 21.4× | 1e-04 |
Disease & clinical
Cancer significance
From intOGen — cancer-driver classification: loss-of-function (tumor-suppressor-like) across 3 cancer types — COAD, COADREAD, STAD.
Clinical variants and AI predictions
ClinVar
263 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 4 |
| Likely pathogenic | 0 |
| Uncertain significance | 228 |
| Likely benign | 10 |
| Benign | 3 |
Top pathogenic / likely-pathogenic (4)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1703635 | GRCh37/hg19 1q21.1-21.2(chr1:146043713-147830830) | Pathogenic |
| 2498453 | GRCh37/hg19 1q21.1-21.2(chr1:146405854-147597284)x1 | Pathogenic |
| 2506525 | GRCh37/hg19 1q21.1-21.2(chr1:146465878-147416212) | Pathogenic |
| 980944 | GRCh37/hg19 1q21.1-21.2(chr1:146112080-147819815)x3 | Pathogenic |
SpliceAI
2080 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:147614425:A:AG | acceptor_gain | 1.0000 |
| 1:147614426:G:GG | acceptor_gain | 1.0000 |
| 1:147614426:GAAT:G | acceptor_gain | 1.0000 |
| 1:147614582:GTGGT:G | donor_gain | 1.0000 |
| 1:147614609:GCCAA:G | donor_gain | 1.0000 |
| 1:147614613:A:AG | donor_gain | 1.0000 |
| 1:147614617:G:GG | donor_gain | 1.0000 |
| 1:147615801:A:AG | acceptor_gain | 1.0000 |
| 1:147615802:G:GG | acceptor_gain | 1.0000 |
| 1:147618815:GAAC:G | acceptor_gain | 1.0000 |
| 1:147604908:AAAG:A | donor_loss | 0.9900 |
| 1:147604909:AAGGT:A | donor_loss | 0.9900 |
| 1:147604910:AG:A | donor_loss | 0.9900 |
| 1:147604911:GG:G | donor_loss | 0.9900 |
| 1:147604912:G:GA | donor_loss | 0.9900 |
| 1:147604913:T:A | donor_loss | 0.9900 |
| 1:147614422:TTTA:T | acceptor_loss | 0.9900 |
| 1:147614424:TA:T | acceptor_loss | 0.9900 |
| 1:147614425:AGAAT:A | acceptor_gain | 0.9900 |
| 1:147614426:GA:G | acceptor_gain | 0.9900 |
| 1:147614426:GAATG:G | acceptor_gain | 0.9900 |
| 1:147614612:AATAA:A | donor_gain | 0.9900 |
| 1:147614614:TAA:T | donor_gain | 0.9900 |
| 1:147614614:TAAGT:T | donor_loss | 0.9900 |
| 1:147614615:AAGTA:A | donor_loss | 0.9900 |
| 1:147614616:AG:A | donor_loss | 0.9900 |
| 1:147614618:T:A | donor_loss | 0.9900 |
| 1:147614619:A:AG | donor_loss | 0.9900 |
| 1:147615800:CAG:C | acceptor_gain | 0.9900 |
| 1:147615801:AGA:A | acceptor_gain | 0.9900 |
AlphaMissense
9384 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 1:147614595:T:C | F180S | 1.000 |
| 1:147614609:G:C | A185P | 1.000 |
| 1:147614610:C:A | A185D | 1.000 |
| 1:147615804:G:C | A188P | 1.000 |
| 1:147615805:C:A | A188D | 1.000 |
| 1:147615807:G:C | A189P | 1.000 |
| 1:147615817:T:A | V192D | 1.000 |
| 1:147619222:T:C | L356P | 1.000 |
| 1:147619228:A:C | H358P | 1.000 |
| 1:147619231:G:C | R359P | 1.000 |
| 1:147619237:G:C | R361P | 1.000 |
| 1:147619239:T:C | S362P | 1.000 |
| 1:147619240:C:T | S362F | 1.000 |
| 1:147619243:T:C | L363S | 1.000 |
| 1:147619246:A:C | Q364P | 1.000 |
| 1:147619252:T:A | L366H | 1.000 |
| 1:147619252:T:C | L366P | 1.000 |
| 1:147619258:A:C | D368A | 1.000 |
| 1:147619258:A:G | D368G | 1.000 |
| 1:147619258:A:T | D368V | 1.000 |
| 1:147619261:T:A | I369N | 1.000 |
| 1:147619261:T:C | I369T | 1.000 |
| 1:147619261:T:G | I369S | 1.000 |
| 1:147619264:A:C | Q370P | 1.000 |
| 1:147619267:G:C | R371P | 1.000 |
| 1:147619273:T:C | L373P | 1.000 |
| 1:147619569:T:A | W472R | 1.000 |
| 1:147619569:T:C | W472R | 1.000 |
| 1:147619570:G:C | W472S | 1.000 |
| 1:147619571:G:C | W472C | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000044846 (1:147543826 C>T), RS1000113498 (1:147580975 C>T), RS1000230405 (1:147625937 C>T), RS1000239110 (1:147606267 A>G,T), RS1000257891 (1:147562166 T>C), RS1000365030 (1:147568015 G>A), RS1000453961 (1:147612757 G>A), RS1000606170 (1:147593361 C>T), RS1000666453 (1:147555216 A>G), RS1000698638 (1:147600293 C>A,T), RS1000779020 (1:147554939 C>G), RS1000805569 (1:147574323 G>A), RS1000847825 (1:147580014 A>G,T), RS1001050889 (1:147542194 G>A), RS1001218608 (1:147587418 T>C)
Disease associations
OMIM: gene MIM:602597 | disease phenotypes: MIM:612475, MIM:192500
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| congenital heart disease | Limited | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| congenital heart disease | Limited | AD |
Mondo (3): chromosome 1q21.1 duplication syndrome (MONDO:0012915), familial long QT syndrome (MONDO:0019171), congenital heart disease (MONDO:0005453)
Orphanet (3): 1q21.1 microduplication syndrome (Orphanet:250994), Romano-Ward syndrome (Orphanet:101016), Congenital long QT syndrome (Orphanet:768)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
5 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001836_2 | Schizophrenia (negative symptoms) | 6.000000e-07 |
| GCST002178_8 | Adverse response to chemotherapy in breast cancer (alopecia) (cyclophosphamide+doxorubicin+/-5FU) | 6.000000e-07 |
| GCST002806_16 | Type 2 diabetes | 6.000000e-06 |
| GCST004766_1 | Triglyceride change in response to fenofibrate in statin-treated type 2 diabetes | 3.000000e-08 |
| GCST010988_253 | Adult body size | 2.000000e-08 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0007681 | triglyceride change measurement |
MeSH disease descriptors (2)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D006330 | Heart Defects, Congenital | C14.240.400; C14.280.400; C16.131.240.400 |
| C567290 | Chromosome 1q21.1 Duplication Syndrome (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL3712821 (SINGLE PROTEIN), CHEMBL3885525 (PROTEIN COMPLEX)
Molecules with ChEMBL bioactivity
1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 74,559 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL50 | QUERCETIN | 3 | 74,559 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
Binding affinities (BindingDB)
6 measured of 6 human assays (6 total across all organisms); most potent 6 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| 4-(3-((S)-3-Ethyl-4-(4’-fluoro-6- (((S)-pyrrolidin-1-ium-3-yl)oxy)- [1,1’-biphenyl]-3-carbonyl) piperazine-1-carbonyl)-5- fluorophenyl)piperazin-1-ium chloride | KI | 10000 nM | US-11634409: Compounds for the treatment of BRAF-associated diseases and disorders |
| (S)-1-(3-Fluoro-5-(4-(4-(pyrrolidin- 3-yloxy)-3-(4-(trifluoromethyl) cyclohexyl)benzoyl)piperazine-1- carbonyl)phenyl)piperazin-2-one hydrochloride | KI | 14000 nM | US-11634409: Compounds for the treatment of BRAF-associated diseases and disorders |
| 4-(3-Fluoro-5-((5)-4-(4’-fluoro-6- (((S)-pyrrolidin-1-ium-3-yl)oxy)- [1,1’-biphenyl]-3-carbonyl)-3- isobutylpiperazine-1-carbonyl) phenyl)piperazin-1-ium chloride | KI | 22000 nM | US-11634409: Compounds for the treatment of BRAF-associated diseases and disorders |
| (S)-1-(3-(4-(3-Cyclohexyl-4- (pyrrolidin-3-yloxy)benzoyl) piperazine-1-carbonyl)-5- fluorophenyl)piperazin-2-one hydrochloride | KI | 39000 nM | US-11634409: Compounds for the treatment of BRAF-associated diseases and disorders |
| 4-(3-Fluoro-5-((5)-4-(4’-fluoro-6- (((S)-pyrrolidin-1-ium-3-yl)oxy)- [1,1’-biphenyl]-3-carbonyl)-3- isopropylpiperazine-1-carbonyl) phenyl)piperazin-1-ium chloride | KI | 45000 nM | US-11634409: Compounds for the treatment of BRAF-associated diseases and disorders |
| 4-(3-Fluoro-5-((S)-4-(4’-fluoro-6- (((S)-pyrrolidin-1-ium-3-yl)oxy)-[1,1’- biphenyl]-3-carbonyl)-3- methylpiperazine-1-carbonyl) phenyl)piperazin-1-ium chloride | KI | 110000 nM | US-11634409: Compounds for the treatment of BRAF-associated diseases and disorders |
ChEMBL bioactivities
282 potent at pChembl≥5 of 495 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 6.33 | Ki | 470 | nM | CHEMBL4762534 |
| 6.33 | Ki | 470 | nM | CHEMBL4462309 |
| 6.19 | IC50 | 650 | nM | CHEMBL5398967 |
| 6.16 | IC50 | 690 | nM | CHEMBL5398967 |
| 6.14 | IC50 | 720 | nM | CHEMBL5416539 |
| 6.12 | Ki | 760 | nM | CHEMBL4846565 |
| 6.11 | Kd | 770 | nM | CHEMBL4871137 |
| 6.09 | IC50 | 820 | nM | CHEMBL5416539 |
| 6.07 | Ki | 850 | nM | CHEMBL5190873 |
| 6.06 | IC50 | 870 | nM | CHEMBL4846565 |
| 6.05 | IC50 | 890 | nM | CHEMBL5404409 |
| 6.04 | IC50 | 910 | nM | CHEMBL5413417 |
| 6.03 | IC50 | 940 | nM | CHEMBL5413417 |
| 6.02 | IC50 | 960 | nM | CHEMBL5190873 |
| 6.02 | Ki | 960 | nM | CHEMBL5280053 |
| 6.00 | Ki | 1000 | nM | CHEMBL4462309 |
| 6.00 | IC50 | 1000 | nM | CHEMBL5422967 |
| 5.96 | IC50 | 1100 | nM | CHEMBL5399058 |
| 5.96 | IC50 | 1100 | nM | CHEMBL5440529 |
| 5.95 | IC50 | 1130 | nM | CHEMBL5398170 |
| 5.93 | IC50 | 1180 | nM | CHEMBL5440529 |
| 5.93 | IC50 | 1180 | nM | CHEMBL5400908 |
| 5.93 | IC50 | 1180 | nM | CHEMBL5574223 |
| 5.92 | IC50 | 1200 | nM | CHEMBL4583576 |
| 5.92 | IC50 | 1200 | nM | CHEMBL4846565 |
| 5.92 | Ki | 1200 | nM | CHEMBL5208427 |
| 5.92 | IC50 | 1200 | nM | CHEMBL5280053 |
| 5.92 | Ki | 1200 | nM | CHEMBL5280053 |
| 5.92 | IC50 | 1190 | nM | CHEMBL5422967 |
| 5.90 | IC50 | 1270 | nM | CHEMBL5398170 |
| 5.89 | Ki | 1300 | nM | CHEMBL4549859 |
| 5.89 | Ki | 1300 | nM | CHEMBL4583576 |
| 5.88 | IC50 | 1310 | nM | CHEMBL5418296 |
| 5.88 | IC50 | 1330 | nM | CHEMBL5397851 |
| 5.87 | IC50 | 1360 | nM | CHEMBL5400908 |
| 5.87 | IC50 | 1350 | nM | CHEMBL5570851 |
| 5.86 | IC50 | 1380 | nM | CHEMBL5399058 |
| 5.85 | IC50 | 1400 | nM | CHEMBL5208427 |
| 5.85 | IC50 | 1420 | nM | CHEMBL5573872 |
| 5.83 | IC50 | 1490 | nM | CHEMBL5420343 |
| 5.82 | Ki | 1500 | nM | CHEMBL4074243 |
| 5.82 | IC50 | 1500 | nM | CHEMBL5280053 |
| 5.80 | Kd | 1590 | nM | CHEMBL4074243 |
| 5.80 | Ki | 1600 | nM | CHEMBL4783692 |
| 5.80 | IC50 | 1580 | nM | CHEMBL5406240 |
| 5.79 | IC50 | 1640 | nM | CHEMBL5571557 |
| 5.79 | IC50 | 1610 | nM | CHEMBL5570927 |
| 5.78 | IC50 | 1650 | nM | CHEMBL5572538 |
| 5.75 | Ki | 1800 | nM | CHEMBL5187855 |
| 5.74 | IC50 | 1830 | nM | CHEMBL5573731 |
PubChem BioAssay actives
256 with measured affinity, of 588 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 3-(3,4-difluorophenyl)-4-[(3S)-pyrrolidin-3-yl]oxy-N-[4-[(3S)-pyrrolidin-3-yl]oxy-3-[3-(2H-tetrazol-5-yl)phenyl]phenyl]benzamide;dihydrochloride | 1966236: Inhibition of beta-catenin (unknown origin)/BCL9 (unknown origin) protein-protein interaction assessed as inhibition constant by AlphaScreen assay | ki | 0.4700 | uM |
| 3-(3,4-difluorophenyl)-4-[(3S)-pyrrolidin-3-yl]oxy-N-[4-[(3R)-pyrrolidin-3-yl]oxy-3-[3-(2H-tetrazol-5-yl)phenyl]phenyl]benzamide;dihydrochloride | 1686801: Inhibition of protein interaction between C-terminal 6x-histidine tagged full-length beta-catenin (1 to 781 residues) (unknown origin)/N-terminal biotinylated human BCL9 ( 350 to 375 residues) incubated for 1 hr by Alpha-screen competitive inhibition assay | ki | 0.4700 | uM |
| 2-methyl-2-[3-[(3R)-1-[3-(4-propan-2-ylphenyl)phenyl]sulfonylpiperidin-3-yl]phenoxy]-N-[4-(trifluoromethyl)phenyl]sulfonylpropanamide | 1966238: Inhibition of N-terminal His6-tagged full-length recombinant beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 DE3/N-terminal FAM tagged BCL9 HD2(350 to 375 residues) (unknown origin) protein-protein interaction assessed as inhibition constant incubated for 3 hrs by competitive fluorescence polarization assay | ic50 | 0.6500 | uM |
| 2-methyl-2-[3-[1-[3-(4-propan-2-ylphenyl)phenyl]sulfonylpiperidin-3-yl]phenoxy]-N-[4-(trifluoromethyl)phenyl]sulfonylpropanamide | 1966238: Inhibition of N-terminal His6-tagged full-length recombinant beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 DE3/N-terminal FAM tagged BCL9 HD2(350 to 375 residues) (unknown origin) protein-protein interaction assessed as inhibition constant incubated for 3 hrs by competitive fluorescence polarization assay | ic50 | 0.7200 | uM |
| (3R)-N-cyclopropyl-1-[3-(2-methyl-1-oxo-1-piperazin-1-ylpropan-2-yl)oxyphenyl]-N-[[4-(1H-pyrazol-4-yl)phenyl]methyl]piperidine-3-carboxamide;hydrochloride | 1781263: Inhibition of C-terminal 6-His-tagged beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 (DE3)-N-terminal biotinylated human BCL9 (350 to 375 residues) protein-protein interaction incubated for 1 hr by Alphascreen assay | ki | 0.7600 | uM |
| (3R)-N-[2-[2-[2-[5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]ethoxy]ethoxy]ethyl]-1-[3-(2-methyl-1-oxo-1-piperazin-1-ylpropan-2-yl)oxyphenyl]-N-[[4-(1H-pyrazol-4-yl)phenyl]methyl]piperidine-3-carboxamide | 1781265: Competitive binding affinity to C-terminal 6-His-tagged beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 (DE3)- N-terminal biotinylated human BCL9 (350 to 375 residues) assessed as apparent dissociation constant incubated for 2 hrs by AlphaScreen assay | kd | 0.7700 | uM |
| (3R)-N-cyclopropyl-1-[3-(2-methyl-1-oxo-1-piperazin-1-ylpropan-2-yl)oxyphenyl]-N-[[4-(1H-pyrrolo[2,3-b]pyridin-3-yl)phenyl]methyl]piperidine-3-carboxamide;hydrochloride | 1910851: Inhibition of full length beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 (DE3)-N-terminal biotinylated human BCL9 (350 to 375 residues) protein-protein interaction incubated for 1 hr by Alphascreen assay | ki | 0.8500 | uM |
| N-(4-acetamidophenyl)sulfonyl-2-methyl-2-[3-[1-[3-(4-propan-2-ylphenyl)phenyl]sulfonylpiperidin-3-yl]phenoxy]propanamide | 1966238: Inhibition of N-terminal His6-tagged full-length recombinant beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 DE3/N-terminal FAM tagged BCL9 HD2(350 to 375 residues) (unknown origin) protein-protein interaction assessed as inhibition constant incubated for 3 hrs by competitive fluorescence polarization assay | ic50 | 0.8900 | uM |
| 2-methyl-2-[3-[1-[3-(4-propan-2-ylphenyl)phenyl]sulfonylpiperidin-3-yl]phenoxy]-N-thiophen-2-ylsulfonylpropanamide | 1966238: Inhibition of N-terminal His6-tagged full-length recombinant beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 DE3/N-terminal FAM tagged BCL9 HD2(350 to 375 residues) (unknown origin) protein-protein interaction assessed as inhibition constant incubated for 3 hrs by competitive fluorescence polarization assay | ic50 | 0.9100 | uM |
| 2-[1-[3-(4-tert-butylcyclohexyl)-4-[(3S)-pyrrolidin-3-yl]oxybenzoyl]piperidin-4-yl]oxy-4-piperazin-1-ylbenzonitrile;dihydrochloride | 1925278: Inhibition of full length beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 (DE3)/N-terminal biotinylated human BCL9 HD2 (350 to 375 residues) protein-protein interaction assessed as inhibition constant incubated for 1 hr by Alphascreen assay | ki | 0.9600 | uM |
| 2-methyl-2-[3-[1-[3-(4-propan-2-ylphenyl)phenyl]sulfonylpiperidin-3-yl]phenoxy]-N-[4-(trifluoromethoxy)phenyl]sulfonylpropanamide | 1966238: Inhibition of N-terminal His6-tagged full-length recombinant beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 DE3/N-terminal FAM tagged BCL9 HD2(350 to 375 residues) (unknown origin) protein-protein interaction assessed as inhibition constant incubated for 3 hrs by competitive fluorescence polarization assay | ic50 | 1.0000 | uM |
| 2-methyl-2-[3-[(3S)-1-[3-(4-propan-2-ylphenyl)phenyl]sulfonylpiperidin-3-yl]phenoxy]-N-[4-(trifluoromethyl)phenyl]sulfonylpropanamide | 1966238: Inhibition of N-terminal His6-tagged full-length recombinant beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 DE3/N-terminal FAM tagged BCL9 HD2(350 to 375 residues) (unknown origin) protein-protein interaction assessed as inhibition constant incubated for 3 hrs by competitive fluorescence polarization assay | ic50 | 1.1000 | uM |
| N-(benzenesulfonyl)-2-methyl-2-[3-[1-[3-(4-propan-2-ylphenyl)phenyl]sulfonylpiperidin-3-yl]phenoxy]propanamide | 1966239: Inhibition of beta-catenin/BCL9 protein-protein interaction in Wnt-dependent human HCT-116 cells assessed as reduction in Axin2 expression level by qRT-PCR assay | ic50 | 1.1000 | uM |
| N-(3-cyanophenyl)sulfonyl-2-methyl-2-[3-[1-[3-(4-propan-2-ylphenyl)phenyl]sulfonylpiperidin-3-yl]phenoxy]propanamide | 1966239: Inhibition of beta-catenin/BCL9 protein-protein interaction in Wnt-dependent human HCT-116 cells assessed as reduction in Axin2 expression level by qRT-PCR assay | ic50 | 1.1300 | uM |
| N-[2-chloro-4-(trifluoromethyl)phenyl]sulfonyl-2-methyl-2-[3-[1-[3-(4-propan-2-ylphenyl)phenyl]sulfonylpiperidin-3-yl]phenoxy]propanamide | 1966238: Inhibition of N-terminal His6-tagged full-length recombinant beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 DE3/N-terminal FAM tagged BCL9 HD2(350 to 375 residues) (unknown origin) protein-protein interaction assessed as inhibition constant incubated for 3 hrs by competitive fluorescence polarization assay | ic50 | 1.1800 | uM |
| N-[2-[(3S)-3-(aminomethyl)pyrrolidin-1-yl]-2-oxoethyl]-2-[3-[(3R)-3-[[cyclopropyl-[[4-(1H-pyrazol-4-yl)phenyl]methyl]carbamoyl]amino]piperidin-1-yl]phenoxy]-2-methylpropanamide | 2109718: Inhibition of full length his-tagged human beta-catenin (1 to 781 residues) expressed in Escherichia coli DE3/N-terminal FAM-tagged human BCL9 (350 to 375 residues) protein-protein interaction incubated for 2 hrs by fluorescence polarization assay | ic50 | 1.1800 | uM |
| 3-(1-benzothiophen-6-yl)-N-[3-(4-fluorophenyl)-4-[(3S)-pyrrolidin-3-yl]oxyphenyl]-4-[(3S)-pyrrolidin-3-yl]oxybenzamide;dihydrochloride | 1686813: Inhibition of protein interaction between beta-catenin (unknown origin)/BCL9 in human SW480 cells transfected with beta-catenin assessed as reduction in Wnt/beta-catenin transactivation incubated for 24 hrs by Wnt-responsive TOP-Flash luciferase reporter assay | ic50 | 1.2000 | uM |
| (3R)-N-cyclopropyl-N-[[4-(1H-indol-3-yl)phenyl]methyl]-1-[3-(2-methyl-1-oxo-1-piperazin-1-ylpropan-2-yl)oxyphenyl]piperidine-3-carboxamide;hydrochloride | 1910851: Inhibition of full length beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 (DE3)-N-terminal biotinylated human BCL9 (350 to 375 residues) protein-protein interaction incubated for 1 hr by Alphascreen assay | ki | 1.2000 | uM |
| 3-(6-fluoronaphthalen-2-yl)-N-[3-(4-fluorophenyl)-4-[(3S)-pyrrolidin-3-yl]oxyphenyl]-4-[(3S)-pyrrolidin-3-yl]oxybenzamide;dihydrochloride | 1686801: Inhibition of protein interaction between C-terminal 6x-histidine tagged full-length beta-catenin (1 to 781 residues) (unknown origin)/N-terminal biotinylated human BCL9 ( 350 to 375 residues) incubated for 1 hr by Alpha-screen competitive inhibition assay | ki | 1.3000 | uM |
| 2-[3-[1-[3-(4-tert-butylphenyl)phenyl]sulfonylpiperidin-3-yl]phenoxy]-2-methylpropanoic acid | 1966239: Inhibition of beta-catenin/BCL9 protein-protein interaction in Wnt-dependent human HCT-116 cells assessed as reduction in Axin2 expression level by qRT-PCR assay | ic50 | 1.3100 | uM |
| 2-methyl-2-[3-[1-[3-(4-propan-2-ylphenyl)phenyl]sulfonylpiperidin-3-yl]phenoxy]-N-[3-(trifluoromethyl)phenyl]sulfonylpropanamide | 1966239: Inhibition of beta-catenin/BCL9 protein-protein interaction in Wnt-dependent human HCT-116 cells assessed as reduction in Axin2 expression level by qRT-PCR assay | ic50 | 1.3300 | uM |
| methyl 2-[[2-[3-[(3R)-3-[[cyclopropyl-[[4-(1H-pyrazol-4-yl)phenyl]methyl]carbamoyl]amino]piperidin-1-yl]phenoxy]-2-methylpropanoyl]amino]acetate | 2109718: Inhibition of full length his-tagged human beta-catenin (1 to 781 residues) expressed in Escherichia coli DE3/N-terminal FAM-tagged human BCL9 (350 to 375 residues) protein-protein interaction incubated for 2 hrs by fluorescence polarization assay | ic50 | 1.3500 | uM |
| N-[2-[(2S)-2-(aminomethyl)pyrrolidin-1-yl]-2-oxoethyl]-2-[3-[(3S)-3-[[cyclopropyl-[[6-(1H-pyrazol-4-yl)-3-pyridinyl]methyl]carbamoyl]amino]piperidin-1-yl]phenoxy]-2-methylpropanamide | 2109718: Inhibition of full length his-tagged human beta-catenin (1 to 781 residues) expressed in Escherichia coli DE3/N-terminal FAM-tagged human BCL9 (350 to 375 residues) protein-protein interaction incubated for 2 hrs by fluorescence polarization assay | ic50 | 1.4200 | uM |
| N-(4-cyanophenyl)sulfonyl-2-methyl-2-[3-[1-[3-(4-propan-2-ylphenyl)phenyl]sulfonylpiperidin-3-yl]phenoxy]propanamide | 1966239: Inhibition of beta-catenin/BCL9 protein-protein interaction in Wnt-dependent human HCT-116 cells assessed as reduction in Axin2 expression level by qRT-PCR assay | ic50 | 1.4900 | uM |
| 3-(3,4-difluorophenyl)-N-[3-(4-fluorophenyl)-4-[(3S)-pyrrolidin-3-yl]oxyphenyl]-4-[(3S)-pyrrolidin-3-yl]oxybenzamide;dihydrochloride | 1686801: Inhibition of protein interaction between C-terminal 6x-histidine tagged full-length beta-catenin (1 to 781 residues) (unknown origin)/N-terminal biotinylated human BCL9 ( 350 to 375 residues) incubated for 1 hr by Alpha-screen competitive inhibition assay | ki | 1.5000 | uM |
| 2-methyl-2-[3-[1-[3-(4-propan-2-ylphenyl)phenyl]sulfonylpiperidin-3-yl]phenoxy]propanoic acid | 1966238: Inhibition of N-terminal His6-tagged full-length recombinant beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 DE3/N-terminal FAM tagged BCL9 HD2(350 to 375 residues) (unknown origin) protein-protein interaction assessed as inhibition constant incubated for 3 hrs by competitive fluorescence polarization assay | ic50 | 1.5800 | uM |
| 3-(1-benzothiophen-6-yl)-4-[(3S)-pyrrolidin-3-yl]oxy-N-[4-[(3R)-pyrrolidin-3-yl]oxy-3-[3-(2H-tetrazol-5-yl)phenyl]phenyl]benzamide;dihydrochloride | 1686801: Inhibition of protein interaction between C-terminal 6x-histidine tagged full-length beta-catenin (1 to 781 residues) (unknown origin)/N-terminal biotinylated human BCL9 ( 350 to 375 residues) incubated for 1 hr by Alpha-screen competitive inhibition assay | ki | 1.6000 | uM |
| 2-[3-[(3S)-3-[[cyclopropyl-[[4-(1H-pyrazol-4-yl)phenyl]methyl]carbamoyl]amino]piperidin-1-yl]phenoxy]-N-[2-[(3S)-3-hydroxypyrrolidin-1-yl]-2-oxoethyl]-2-methylpropanamide | 2109718: Inhibition of full length his-tagged human beta-catenin (1 to 781 residues) expressed in Escherichia coli DE3/N-terminal FAM-tagged human BCL9 (350 to 375 residues) protein-protein interaction incubated for 2 hrs by fluorescence polarization assay | ic50 | 1.6100 | uM |
| N-[2-[(2S)-2-(aminomethyl)piperidin-1-yl]-2-oxoethyl]-2-[3-[(3R)-3-[[cyclopropyl-[[4-(1H-pyrazol-4-yl)phenyl]methyl]carbamoyl]amino]piperidin-1-yl]phenoxy]-2-methylpropanamide | 2109718: Inhibition of full length his-tagged human beta-catenin (1 to 781 residues) expressed in Escherichia coli DE3/N-terminal FAM-tagged human BCL9 (350 to 375 residues) protein-protein interaction incubated for 2 hrs by fluorescence polarization assay | ic50 | 1.6400 | uM |
| 2-[3-[(3S)-3-[[cyclopropyl-[[4-(1H-pyrazol-4-yl)phenyl]methyl]carbamoyl]amino]piperidin-1-yl]phenoxy]-N-[2-[(3S)-3-(dimethylamino)pyrrolidin-1-yl]-2-oxoethyl]-2-methylpropanamide | 2109718: Inhibition of full length his-tagged human beta-catenin (1 to 781 residues) expressed in Escherichia coli DE3/N-terminal FAM-tagged human BCL9 (350 to 375 residues) protein-protein interaction incubated for 2 hrs by fluorescence polarization assay | ic50 | 1.6500 | uM |
| (3R)-N-cyclopropyl-1-[3-(2-methyl-1-oxo-1-piperazin-1-ylpropan-2-yl)oxyphenyl]-N-[[4-(1H-pyrrolo[2,3-b]pyridin-4-yl)phenyl]methyl]piperidine-3-carboxamide;hydrochloride | 1910851: Inhibition of full length beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 (DE3)-N-terminal biotinylated human BCL9 (350 to 375 residues) protein-protein interaction incubated for 1 hr by Alphascreen assay | ki | 1.8000 | uM |
| 2-[3-[(3S)-3-[[cyclopropyl-[[4-(1H-pyrazol-4-yl)phenyl]methyl]carbamoyl]amino]piperidin-1-yl]phenoxy]-N-[2-[(2S)-2-[(dimethylamino)methyl]pyrrolidin-1-yl]-2-oxoethyl]-2-methylpropanamide | 2109718: Inhibition of full length his-tagged human beta-catenin (1 to 781 residues) expressed in Escherichia coli DE3/N-terminal FAM-tagged human BCL9 (350 to 375 residues) protein-protein interaction incubated for 2 hrs by fluorescence polarization assay | ic50 | 1.8200 | uM |
| N-(2-aminoethyl)-2-[3-[(3S)-3-[[cyclopropyl-[[4-(1H-pyrazol-4-yl)phenyl]methyl]carbamoyl]amino]piperidin-1-yl]phenoxy]-2-methylpropanamide | 2109718: Inhibition of full length his-tagged human beta-catenin (1 to 781 residues) expressed in Escherichia coli DE3/N-terminal FAM-tagged human BCL9 (350 to 375 residues) protein-protein interaction incubated for 2 hrs by fluorescence polarization assay | ic50 | 1.8300 | uM |
| (3R)-N-(2-ethoxyethyl)-1-[3-(2-methyl-1-oxo-1-piperazin-1-ylpropan-2-yl)oxyphenyl]-N-[[4-(1H-pyrazol-4-yl)phenyl]methyl]piperidine-3-carboxamide;hydrochloride | 1781263: Inhibition of C-terminal 6-His-tagged beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 (DE3)-N-terminal biotinylated human BCL9 (350 to 375 residues) protein-protein interaction incubated for 1 hr by Alphascreen assay | ki | 1.9000 | uM |
| 3-(3,4-difluorophenyl)-N-[3-(4-fluoro-2-methylphenyl)-4-[(3S)-pyrrolidin-3-yl]oxyphenyl]-4-[(3S)-pyrrolidin-3-yl]oxybenzamide;dihydrochloride | 1686813: Inhibition of protein interaction between beta-catenin (unknown origin)/BCL9 in human SW480 cells transfected with beta-catenin assessed as reduction in Wnt/beta-catenin transactivation incubated for 24 hrs by Wnt-responsive TOP-Flash luciferase reporter assay | ic50 | 2.0000 | uM |
| (3R)-N-cyclopropyl-N-[[4-(1H-indazol-4-yl)phenyl]methyl]-1-[3-(2-methyl-1-oxo-1-piperazin-1-ylpropan-2-yl)oxyphenyl]piperidine-3-carboxamide;hydrochloride | 1910851: Inhibition of full length beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 (DE3)-N-terminal biotinylated human BCL9 (350 to 375 residues) protein-protein interaction incubated for 1 hr by Alphascreen assay | ki | 2.0000 | uM |
| N-[2-[2-(2-aminoethyl)pyrrolidin-1-yl]-2-oxoethyl]-2-[3-[(3S)-3-[[cyclopropyl-[[4-(1H-pyrazol-4-yl)phenyl]methyl]carbamoyl]amino]piperidin-1-yl]phenoxy]-2-methylpropanamide | 2109718: Inhibition of full length his-tagged human beta-catenin (1 to 781 residues) expressed in Escherichia coli DE3/N-terminal FAM-tagged human BCL9 (350 to 375 residues) protein-protein interaction incubated for 2 hrs by fluorescence polarization assay | ic50 | 2.0600 | uM |
| 3-(3,4-difluorophenyl)-N-[3-(4-fluorophenyl)-4-[(3S)-pyrrolidin-3-yl]oxyphenyl]-4-[(3S)-pyrrolidin-3-yl]oxybenzamide | 1979699: Inhibition of His6-tagged human beta-Catenin (138 to 686 residues)/biotinylated human BCL9 (350 to 375 residues) protein-protein interaction assessed as inhibition constant by AlphaScreen competitive assay | ki | 2.1000 | uM |
| 3-(3,4-difluorophenyl)-N-[3-(4-fluorophenyl)-4-pyrrolidin-3-yloxyphenyl]-4-[(3S)-pyrrolidin-3-yl]oxybenzamide;dihydrochloride | 1308849: Competitive inhibition of wild type beta-catenin (unknown origin) expressed in Escherichia coli BL21 DE3 interaction with N-terminally biotinylated human BCL9 (350 to 375 residues) by alpha screen assay | ki | 2.1000 | uM |
| 3-(3,4-difluorophenyl)-N-[3-(4-fluorophenyl)-4-[(3R)-pyrrolidin-3-yl]oxyphenyl]-4-[(3S)-pyrrolidin-3-yl]oxybenzamide;dihydrochloride | 1966235: Inhibition of beta-catenin (unknown origin)/human BCL9 (350 to 375 residues) protein-protein interaction assessed as inhibition constant by AlphaScreen assay | ki | 2.1000 | uM |
| (3R)-N-ethyl-1-[3-(2-methyl-1-oxo-1-piperazin-1-ylpropan-2-yl)oxyphenyl]-N-[[4-(1H-pyrazol-4-yl)phenyl]methyl]piperidine-3-carboxamide;hydrochloride | 1781263: Inhibition of C-terminal 6-His-tagged beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 (DE3)-N-terminal biotinylated human BCL9 (350 to 375 residues) protein-protein interaction incubated for 1 hr by Alphascreen assay | ki | 2.1000 | uM |
| (4-nitrophenyl) butanoate | 2109717: Inhibition of beta-catenin (unknown origin)/BCL9 (unknown origin) protein-protein interaction | ki | 2.1000 | uM |
| 6-(3,4-difluorophenyl)-3-[3-(4-fluorophenyl)-4-[(3S)-pyrrolidin-3-yl]oxyphenyl]-7-[(3S)-pyrrolidin-3-yl]oxyquinoline;dihydrochloride | 1686801: Inhibition of protein interaction between C-terminal 6x-histidine tagged full-length beta-catenin (1 to 781 residues) (unknown origin)/N-terminal biotinylated human BCL9 ( 350 to 375 residues) incubated for 1 hr by Alpha-screen competitive inhibition assay | ki | 2.2000 | uM |
| [3-(4-tert-butylcyclohexyl)-4-[(3S)-pyrrolidin-3-yl]oxyphenyl]-[4-(2-chloro-5-piperazin-1-ylphenoxy)piperidin-1-yl]methanone;dihydrochloride | 1925278: Inhibition of full length beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 (DE3)/N-terminal biotinylated human BCL9 HD2 (350 to 375 residues) protein-protein interaction assessed as inhibition constant incubated for 1 hr by Alphascreen assay | ki | 2.2000 | uM |
| N-[2-[(2S)-2-(aminomethyl)pyrrolidin-1-yl]-2-oxoethyl]-2-[3-[(3R)-3-[[cyclopropyl-[[6-(1H-pyrazol-4-yl)-3-pyridinyl]methyl]carbamoyl]amino]piperidin-1-yl]phenoxy]-2-methylpropanamide | 2109718: Inhibition of full length his-tagged human beta-catenin (1 to 781 residues) expressed in Escherichia coli DE3/N-terminal FAM-tagged human BCL9 (350 to 375 residues) protein-protein interaction incubated for 2 hrs by fluorescence polarization assay | ic50 | 2.2100 | uM |
| 2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-8-(4-methylphenyl)chromen-4-one | 2005038: Inhibition of full length beta-catenin (unknown origin)/FAM labeled BCL9 (350 to 375 residues) (unknown origin) protein-protein interaction by competitive FP assay | ic50 | 2.2500 | uM |
| (3S)-N-cyclopropyl-1-[3-[1-[(3-methoxyphenyl)sulfonylamino]-2-methyl-1-oxopropan-2-yl]oxyphenyl]-N-[(4-thiophen-2-ylphenyl)methyl]piperidine-3-carboxamide | 1765112: Inhibition of full length C-terminal 6-His-tagged beta-catenin (1 to 781 residues) (unknown origin) expressed in Escherichia coli BL21 (DE3)-N-terminal biotinylated human BCL9 (350 to 375 residues) protein-protein interaction incubated for 1 hr by Alphascreen assay | ki | 2.3000 | uM |
| 2-(3,4-dihydroxyphenyl)-8-(4-fluorophenyl)-3,5,7-trihydroxychromen-4-one | 2005038: Inhibition of full length beta-catenin (unknown origin)/FAM labeled BCL9 (350 to 375 residues) (unknown origin) protein-protein interaction by competitive FP assay | ic50 | 2.3500 | uM |
| N-(3-aminopropyl)-2-[3-[(3R)-3-[[cyclopropyl-[[4-(1H-pyrazol-4-yl)phenyl]methyl]carbamoyl]amino]piperidin-1-yl]phenoxy]-2-methylpropanamide | 2109718: Inhibition of full length his-tagged human beta-catenin (1 to 781 residues) expressed in Escherichia coli DE3/N-terminal FAM-tagged human BCL9 (350 to 375 residues) protein-protein interaction incubated for 2 hrs by fluorescence polarization assay | ic50 | 2.5900 | uM |
| (6S,9aS)-N-benzyl-6-[(4-hydroxyphenyl)methyl]-8-(naphthalen-1-ylmethyl)-4,7-dioxo-3,6,9,9a-tetrahydro-2H-pyrazino[1,2-a]pyrimidine-1-carboxamide | 1966239: Inhibition of beta-catenin/BCL9 protein-protein interaction in Wnt-dependent human HCT-116 cells assessed as reduction in Axin2 expression level by qRT-PCR assay | ic50 | 2.6900 | uM |
CTD chemical–gene interactions
38 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | affects methylation | 2 |
| Aflatoxin B1 | increases methylation | 2 |
| GSK-J4 | decreases expression | 1 |
| FR900359 | affects phosphorylation | 1 |
| bisphenol F | affects cotreatment, increases methylation | 1 |
| dicrotophos | increases expression | 1 |
| bufotalin | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| bisphenol A | affects cotreatment, increases methylation | 1 |
| arsenite | affects binding, decreases reaction | 1 |
| sodium arsenite | affects cotreatment, increases abundance, increases expression | 1 |
| manganese chloride | affects cotreatment, increases abundance, increases expression | 1 |
| benzo(e)pyrene | increases methylation | 1 |
| potassium chromate(VI) | increases expression | 1 |
| 2,3-bis(3’-hydroxybenzyl)butyrolactone | affects cotreatment, decreases expression | 1 |
| nickel sulfate | increases expression | 1 |
| chromium hexavalent ion | increases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| PKF115-584 | increases expression | 1 |
| Irinotecan | increases expression | 1 |
| Sunitinib | decreases expression | 1 |
| Fulvestrant | affects cotreatment, increases methylation | 1 |
| Matrines | decreases expression, decreases reaction, increases cleavage, increases expression | 1 |
| Arsenic | increases expression, affects cotreatment, increases abundance | 1 |
| Atrazine | increases expression | 1 |
| Cadmium | decreases expression, increases abundance | 1 |
| Caffeine | affects phosphorylation | 1 |
| Cannabidiol | increases expression | 1 |
| Coumestrol | affects cotreatment, decreases expression | 1 |
| Doxorubicin | decreases expression | 1 |
ChEMBL screening assays
125 unique, capped per target: 125 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4419383 | Binding | Binding affinity to human BCL9 (350 to 375 residues) by ITC method | Substituted n-([1,1’’-biphenyl]-3-yl)-[1,1’’-biphenyl]-3-carboxamide analogs as inhibitors for beta-catenin/b-cell lymphoma 9 interactions |
Cellosaurus cell lines
7 cell lines: 7 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_9489 | CEMO-1 | Cancer cell line | Male |
| CVCL_A083 | YCUB-4 | Cancer cell line | Male |
| CVCL_A084 | YCUB-4R | Cancer cell line | Male |
| CVCL_D3ZJ | KCB9 | Cancer cell line | Female |
| CVCL_D4AF | M4A1-M2B9 | Cancer cell line | Male |
| CVCL_SF05 | HAP1 BCL9 (-) 1 | Cancer cell line | Male |
| CVCL_SF06 | HAP1 BCL9 (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
366 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00668824 | PHASE4 | UNKNOWN | Improved Diagnosis of Congenital Heart Disease by Magnetic Resonance Imaging Using Vasovist |
| NCT01368705 | PHASE4 | COMPLETED | Nitrogen Balance in Infants After Post Cardiothoracic Surgery |
| NCT01619982 | PHASE4 | COMPLETED | Pre-operative Prophylaxis With Vancomycin and Cefazolin in Pediatric Cardiovascular Surgery Patients |
| NCT02122679 | PHASE4 | WITHDRAWN | Tranexamic Acid Effect on Platelet Aggregation Following Infant Cardiopulmonary Bypass |
| NCT02527811 | PHASE4 | UNKNOWN | Ulinastatin Injection in in Pediatric Patients Undergoing Open Heart Surgery |
| NCT03014700 | PHASE4 | COMPLETED | Fibrinogen Concentrate vs Cryoprecipitate |
| NCT03408340 | PHASE4 | TERMINATED | Paravertebral Nerve Blocks in Neonates |
| NCT03630796 | PHASE4 | UNKNOWN | Effect of Sevoflurane in Postoperative Troponin I Levels in Children Undergoing Congenital Heart Defects Surgery |
| NCT03667703 | PHASE4 | COMPLETED | Stress Ulcer Prophylaxis Versus Placebo in Critically Ill Infants With Congenital Heart Disease |
| NCT04453761 | PHASE4 | UNKNOWN | Thiamine Influenced on Substrate Energy Effectiveness in Indonesian Children Undergoing Cardiopulmonary Bypass |
| NCT06668389 | PHASE4 | RECRUITING | Sodium-Glucose Cotransporter 2 Inhibitors for Repaired Tetralogy of Fallot Patients for Enhancement of Cardio-Pulmonary Status Trial |
| NCT07499154 | PHASE4 | NOT_YET_RECRUITING | Perioperative Lidocaine for Lung Protection in Infants Undergoing Cardiac Surgery |
| NCT02513940 | PHASE4 | COMPLETED | Influence of Testosterone Administration on Drug-Induced QT Interval Prolongation and Torsades de Pointes |
| NCT03834883 | PHASE4 | COMPLETED | Reducing the Risk of Drug-Induced QT Interval Lengthening in Women |
| NCT04169100 | PHASE4 | UNKNOWN | Novel Form of Acquired Long QT Syndrome |
| NCT04675788 | PHASE4 | COMPLETED | Novel Approaches for Minimizing Drug-Induced QT Interval Lengthening |
| NCT00000470 | PHASE3 | COMPLETED | Infant Heart Surgery: Central Nervous System Sequelae of Circulatory Arrest |
| NCT00000494 | PHASE3 | COMPLETED | Management of Patent Ductus in Premature Infants |
| NCT01134302 | PHASE3 | UNKNOWN | Hybrid Versus Norwood Management Strategies in Infants Undergoing Single Ventricle Palliation |
| NCT01607983 | PHASE3 | WITHDRAWN | Effects of Pulmonary Vasodilation Upon VA Coupling in Fontan Patients |
| NCT01662011 | PHASE3 | UNKNOWN | Application of Neurally Adjusted Ventilatory Assist to Children After Congenital Cardiac Surgery |
| NCT02320669 | PHASE3 | COMPLETED | Phase 3 Triiodothyronine Supplementation for Infants After Cardiopulmonary Bypass |
| NCT02615262 | PHASE3 | COMPLETED | Intraoperative Dexamethasone in Pediatric Cardiac Surgery |
| NCT03153137 | PHASE3 | COMPLETED | Clinical Study Assessing the Efficacy and Safety of Macitentan in Fontan-palliated Subjects |
| NCT03154476 | PHASE3 | COMPLETED | Role of Sildenafil for Fontan Associated Liver Disease (SiFALD) Study |
| NCT04536194 | PHASE3 | COMPLETED | Dopamine Versus Norepinephrine Under General Anesthesia |
| NCT04702373 | PHASE3 | ACTIVE_NOT_RECRUITING | Training in Exercise Activities and Motion for Growth (TEAM 4 Growth) RCT |
| NCT05049590 | PHASE3 | COMPLETED | Acute Normovolemic Hemodilution in Complex Cardiac Surgery |
| NCT06406517 | PHASE3 | UNKNOWN | Comparative Effectiveness of Gadopiclenol for Evaluation of Adult Congenital Heart Anatomy and Hemodynamics |
| NCT06693674 | PHASE3 | RECRUITING | Effect of Sacubitril-Valsartan on Cardiac Structure and Function |
| NCT06955260 | PHASE3 | NOT_YET_RECRUITING | SGLT2 Inhibition With Empagliflozin in Fontan Circulatory Failure |
| NCT00115375 | PHASE2 | COMPLETED | Platelet Aggregation Inhibition in Children on Clopidogrel (PICOLO) |
| NCT00350220 | PHASE2 | COMPLETED | Transfusion Strategies in Pediatric Cardiothoracic Surgery |
| NCT00374088 | PHASE2 | COMPLETED | N-Acetylcysteine in Neonatal Congenital Heart Surgery (INACT Study) |
| NCT00538785 | PHASE2 | COMPLETED | A Study to Evaluate MEDI-524 In Children With Hemodynamically Significant Congenital Heart Disease |
| NCT00770705 | PHASE2 | WITHDRAWN | Parenteral Phenoxybenzamine During Congenital Heart Disease Surgery |
| NCT00919945 | PHASE2 | TERMINATED | Impact of Early Enteral Feeding on Splanchnic Blood Flow After Surgery for Critical Heart Disease in the Newborn |
| NCT01063712 | PHASE2 | COMPLETED | Safety and Effectiveness of the Device Nit-Occlud® PDA-R |
| NCT01069510 | PHASE2 | COMPLETED | Spironolactone in Adult Congenital Heart Disease |
| NCT01189981 | PHASE2 | COMPLETED | Effect of eHealth Encouragements to Intensive Exercise in Adolescents With Congenital Heart Disease |
Related Atlas pages
- Associated diseases: congenital heart disease
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): chemotherapy-induced alopecia, chromosome 1q21.1 duplication syndrome, congenital heart disease, familial long QT syndrome, type 2 diabetes mellitus